2024-10-07T04:01:22,805 Created temporary directory: /tmp/pip-build-tracker-jraahegg 2024-10-07T04:01:22,806 Initialized build tracking at /tmp/pip-build-tracker-jraahegg 2024-10-07T04:01:22,807 Created build tracker: /tmp/pip-build-tracker-jraahegg 2024-10-07T04:01:22,807 Entered build tracker: /tmp/pip-build-tracker-jraahegg 2024-10-07T04:01:22,808 Created temporary directory: /tmp/pip-wheel-xyxrzjny 2024-10-07T04:01:22,812 Created temporary directory: /tmp/pip-ephem-wheel-cache-zfn4xdms 2024-10-07T04:01:22,859 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-10-07T04:01:22,862 2 location(s) to search for versions of starfish: 2024-10-07T04:01:22,862 * https://pypi.org/simple/starfish/ 2024-10-07T04:01:22,862 * https://www.piwheels.org/simple/starfish/ 2024-10-07T04:01:22,862 Fetching project page and analyzing links: https://pypi.org/simple/starfish/ 2024-10-07T04:01:22,863 Getting page https://pypi.org/simple/starfish/ 2024-10-07T04:01:22,865 Found index url https://pypi.org/simple/ 2024-10-07T04:01:23,083 Fetched page https://pypi.org/simple/starfish/ as application/vnd.pypi.simple.v1+json 2024-10-07T04:01:23,093 Skipping link: No binaries permitted for starfish: https://files.pythonhosted.org/packages/ca/cb/a87eaed3aadd4749c556b05f37a30a0b262793bf382d543fe18c84728daa/starfish-0.0.0a0-py3-none-any.whl (from https://pypi.org/simple/starfish/) 2024-10-07T04:01:23,094 Found link https://files.pythonhosted.org/packages/31/70/6a03a0c66bd29cd3dc7c45f9461454789c06b71d8724a49612317fc1b786/starfish-0.0.0a0.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.0a0 2024-10-07T04:01:23,094 Skipping link: No binaries permitted for starfish: https://files.pythonhosted.org/packages/19/bd/49494f9d81b209b2e6c0596ea3012823dc2a617149ba1e26ff1a47649a81/starfish-0.0.0a1-py3-none-any.whl (from https://pypi.org/simple/starfish/) 2024-10-07T04:01:23,095 Found link https://files.pythonhosted.org/packages/d9/ef/51b0999ff891471226353b6bd9be16c01acdb8fef09f9674dce714639e1c/starfish-0.0.0a1.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.0a1 2024-10-07T04:01:23,096 Found link https://files.pythonhosted.org/packages/31/cf/91118662326541c4b9f03fcc8be13827b0d68c47ff043560627de6709d22/starfish-0.0.2.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.2 2024-10-07T04:01:23,096 Found link https://files.pythonhosted.org/packages/ce/cd/a7f804272ac806409bd722be560bea46eb3a62534aa67b363c9beac4747c/starfish-0.0.3.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.3 2024-10-07T04:01:23,097 Found link https://files.pythonhosted.org/packages/ad/65/e1d95d420fc114563ed8baeccf173d7313ca5c3c2c905d53e9a152819481/starfish-0.0.4.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.4 2024-10-07T04:01:23,098 Found link https://files.pythonhosted.org/packages/35/38/1971faa6f669e34ef2d9af3911b85799bedde67545538e2380b696232a26/starfish-0.0.5.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.5 2024-10-07T04:01:23,099 Found link https://files.pythonhosted.org/packages/57/66/fff766bf2472c44be06a53ab1dd6a7e7fefa650b96a289ac23cac9b19f23/starfish-0.0.6.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.6 2024-10-07T04:01:23,099 Found link https://files.pythonhosted.org/packages/0d/21/507e1934196ed40c8321658637cb951510d9a0f542f56f787312130c8646/starfish-0.0.7.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.7 2024-10-07T04:01:23,100 Found link https://files.pythonhosted.org/packages/54/54/69c896987823b6b791a2eba8d2365e1818fcb5ad5f26cf23f8caab251927/starfish-0.0.8.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.8 2024-10-07T04:01:23,101 Found link https://files.pythonhosted.org/packages/5e/13/d045fc66b17e4e9fb979e245e454bec6a5c0be1ad732f4ae1dbe78dfdbf6/starfish-0.0.9.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.9 2024-10-07T04:01:23,101 Found link https://files.pythonhosted.org/packages/9d/c0/5cc35177ea5bb7080c4a037c00ffe6042f5e6eaa1f955b9d585c99e246a6/starfish-0.0.10.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.10 2024-10-07T04:01:23,102 Found link https://files.pythonhosted.org/packages/d5/bf/05f8011dcea7751c3925123eef251b243213a733b359fb3e62eea896b8ed/starfish-0.0.11.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.11 2024-10-07T04:01:23,103 Found link https://files.pythonhosted.org/packages/f9/d4/3a7b082325a86c7f0e62f0437aecd48699e1a0b12615ea8568fa6f480af5/starfish-0.0.12.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.12 2024-10-07T04:01:23,103 Found link https://files.pythonhosted.org/packages/98/b2/e84c9dbcccc64de43bd2dcd4a9c3607e70614c9b4def028423cb9471649c/starfish-0.0.14.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.14 2024-10-07T04:01:23,104 Found link https://files.pythonhosted.org/packages/f4/55/8289cdb579668dab27dc960d5a002c54c6beb257e6a8890f533f80070b32/starfish-0.0.15.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.15 2024-10-07T04:01:23,104 Found link https://files.pythonhosted.org/packages/05/08/35e7bed39030aaf871cb933457749a0c641189ed933cd915552eebe0ab40/starfish-0.0.16.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.16 2024-10-07T04:01:23,105 Found link https://files.pythonhosted.org/packages/90/71/e2b1fd618596c4a326e72203ed52f8d7ce0b0bb373e152f6ad3052621f19/starfish-0.0.17.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.17 2024-10-07T04:01:23,106 Found link https://files.pythonhosted.org/packages/09/39/a96216d4b90b2728365503d9fe4b4f9dfec34679b162f6b13b1f7c007a9d/starfish-0.0.18.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.18 2024-10-07T04:01:23,106 Found link https://files.pythonhosted.org/packages/a7/64/0561019d53b8e75c8169f1ff9d2bf77f86a21eeae3be7e43f2858b449fa1/starfish-0.0.19.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.19 2024-10-07T04:01:23,107 Found link https://files.pythonhosted.org/packages/93/0f/b41f6d4269fccdbda7990ba460ba3a07d042b4d77a3ed0f647be7a3cdfd6/starfish-0.0.20.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.20 2024-10-07T04:01:23,108 Found link https://files.pythonhosted.org/packages/ff/41/b2044e30be97456cbdaba80bf6399141a8f964594264893b21b0082039ab/starfish-0.0.21.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.21 2024-10-07T04:01:23,108 Found link https://files.pythonhosted.org/packages/79/c0/5f26d8e2cd4d7f1179e45a903092a4011951c59668229731353aeb1f20e6/starfish-0.0.22.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.22 2024-10-07T04:01:23,109 Found link https://files.pythonhosted.org/packages/47/ac/9b9123ed4525a16a898acc3deabc78ec14794bbc5275d0a136b11164455c/starfish-0.0.23.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.23 2024-10-07T04:01:23,110 Found link https://files.pythonhosted.org/packages/07/e6/92ce138e938b7971c441c5ca1e1936f3ba32ca739ddf7e19ffed6497b612/starfish-0.0.24.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.24 2024-10-07T04:01:23,110 Found link https://files.pythonhosted.org/packages/6b/0f/392da7855e1e133cdb3394fc3261550e93933c7ebdb78044b2fa9c759f07/starfish-0.0.25.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.25 2024-10-07T04:01:23,111 Found link https://files.pythonhosted.org/packages/e7/b6/9c8705a84994a7d91067d8a535c5d0a93254868ee2066a2ef1c2dcd0f2b8/starfish-0.0.26.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.26 2024-10-07T04:01:23,112 Found link https://files.pythonhosted.org/packages/dd/e9/f1e261eb6f5f8c81407d04d969a45d869c91fab6095f57b0bf8b5ea0f513/starfish-0.0.27.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.27 2024-10-07T04:01:23,112 Found link https://files.pythonhosted.org/packages/09/8d/6572ebc910ca56d134e896c9f0340d88669360b9712cd62fee7fe259b457/starfish-0.0.28.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.28 2024-10-07T04:01:23,113 Found link https://files.pythonhosted.org/packages/09/9d/b8d45abbbf92f28d9a63fcd5da8e622b19523ed43542dd5d62d266481add/starfish-0.0.30.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.30 2024-10-07T04:01:23,114 Found link https://files.pythonhosted.org/packages/7f/84/b1a6a919e181fc38b767c0e7a7961845b2b514d7585e2800665d182daae0/starfish-0.0.32.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.32 2024-10-07T04:01:23,114 Found link https://files.pythonhosted.org/packages/68/a7/8cac11c11305a43c95f9a76710c3f76a9354729cbc648c9cef02714f9cff/starfish-0.0.33.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.33 2024-10-07T04:01:23,115 Found link https://files.pythonhosted.org/packages/29/37/c92cf43801c20099b17eb0c7578d2bcdbf8cd3d0e811ca62614f6eb990f4/starfish-0.0.34.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.34 2024-10-07T04:01:23,116 Found link https://files.pythonhosted.org/packages/59/04/4312e1a9f79c12b59be63599494e158f050121ecf96c372cea5246cca4ae/starfish-0.0.35.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.35 2024-10-07T04:01:23,116 Found link https://files.pythonhosted.org/packages/18/6d/b19751970a223242fe77389a4af41775d43f5f9361be3909661ec185d733/starfish-0.0.36.tar.gz (from https://pypi.org/simple/starfish/), version: 0.0.36 2024-10-07T04:01:23,117 Found link https://files.pythonhosted.org/packages/15/09/c02ba3942c673a052bdce8680e28a84799bf03b2cbf2ba92baf511417118/starfish-0.1.0.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.0 2024-10-07T04:01:23,117 Found link https://files.pythonhosted.org/packages/9a/c3/f43d9e538dbad2b03845a6158356740c0534f7c311a98a1fdb752949f501/starfish-0.1.1.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.1 2024-10-07T04:01:23,118 Found link https://files.pythonhosted.org/packages/09/55/a22d0a20987938cd39b3095f573665eb1b385c449475d941d89b40466fdb/starfish-0.1.2.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.2 2024-10-07T04:01:23,118 Found link https://files.pythonhosted.org/packages/16/58/766eedc12f26200e5f12a2d63a4222d49c82ae729d8c98d2f0cbd6909db2/starfish-0.1.3.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.3 2024-10-07T04:01:23,119 Found link https://files.pythonhosted.org/packages/a9/60/7a30d30b8d5f99046ecd85e89a371188eba4a6a05688fdcaf1babd6cab3f/starfish-0.1.4.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.4 2024-10-07T04:01:23,120 Found link https://files.pythonhosted.org/packages/e6/a1/845173304e51ae574aa6ca75b2a7c8bfe9d644957a91860b732df0127abe/starfish-0.1.5.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.5 2024-10-07T04:01:23,120 Found link https://files.pythonhosted.org/packages/3f/0f/31dab0c67a30f16be496a44335532a3d4021ef3728a4ac1f7a6237812523/starfish-0.1.6.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.6 2024-10-07T04:01:23,121 Found link https://files.pythonhosted.org/packages/b9/f7/3854f84f4087487c2e862285ad17a5bf4ef230c5d0234c8ca8462a056210/starfish-0.1.7.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.7 2024-10-07T04:01:23,122 Found link https://files.pythonhosted.org/packages/14/66/0ca64718ba29483c84166aa1af364ae66dac28447a24c6f302d0e964838c/starfish-0.1.8.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.8 2024-10-07T04:01:23,122 Found link https://files.pythonhosted.org/packages/56/9a/2de4f8a28a639433a1131f20246d1f04a6111356de7341388824ad8b61dc/starfish-0.1.9.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.9 2024-10-07T04:01:23,123 Found link https://files.pythonhosted.org/packages/be/9b/4215abcd20509c27b2885c6736e4640581d00b36e6e3ac178a53138c8f2e/starfish-0.1.10.tar.gz (from https://pypi.org/simple/starfish/), version: 0.1.10 2024-10-07T04:01:23,123 Found link https://files.pythonhosted.org/packages/cf/b6/6a001e31cf9f40bec8c22fb62a3eacaae1687ca6acafecdcc22a5c1ad2d4/starfish-0.2.0.tar.gz (from https://pypi.org/simple/starfish/), version: 0.2.0 2024-10-07T04:01:23,124 Found link https://files.pythonhosted.org/packages/51/57/3dc1c66cbb1723ab764b292408886a396fe8a17faaf5aa43ba80f7d67c80/starfish-0.2.1.tar.gz (from https://pypi.org/simple/starfish/), version: 0.2.1 2024-10-07T04:01:23,124 Found link https://files.pythonhosted.org/packages/22/47/757222c68a59be787b43a472f2174633247705308b328a01487bb8a66dbd/starfish-0.2.2.tar.gz (from https://pypi.org/simple/starfish/), version: 0.2.2 2024-10-07T04:01:23,125 Found link https://files.pythonhosted.org/packages/16/b8/7a8240c6d52bf613bdab14a1768bd11a7d2c608927609800e041a690ab16/starfish-0.3.0.tar.gz (from https://pypi.org/simple/starfish/) (requires-python:<3.12,>=3.9), version: 0.3.0 2024-10-07T04:01:23,127 Fetching project page and analyzing links: https://www.piwheels.org/simple/starfish/ 2024-10-07T04:01:23,127 Getting page https://www.piwheels.org/simple/starfish/ 2024-10-07T04:01:23,128 Found index url https://www.piwheels.org/simple/ 2024-10-07T04:01:23,297 Fetched page https://www.piwheels.org/simple/starfish/ as text/html 2024-10-07T04:01:23,310 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.2.2-py3-none-any.whl#sha256=06fad46018f315fe97054842425c3278fd3b873d429cadbc961fcea46ec4e76c (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,311 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.2.1-py3-none-any.whl#sha256=23a1b9f858903e905ef3004e2dda996e56fb9fcd90ae24f877011a8313667aeb (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,311 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.2.0-py3-none-any.whl#sha256=ca06862a964eb8cd388b04579fade6fd2d3b4023ad920d3b805757741255c429 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,312 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.10-py3-none-any.whl#sha256=cc3c2d33d8d781cf3486fb70f77759355c1563c9afb757e267b1cabec29ca5f9 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,312 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.9-py3-none-any.whl#sha256=f221ebc443cd83d7214259cba2a256d0a839ecef476f966b66bef9f88e92edb7 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,313 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.8-py3-none-any.whl#sha256=8b28e06631ffa63dd4afb490b3488799e4673af3883946374de90db7d7ceb41b (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,313 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.7-py3-none-any.whl#sha256=8bd156d5f9d8959735d69e9126e0a99f83be0004756a335c41d506ae082eebf7 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,314 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.6-py3-none-any.whl#sha256=4f38007bc4f3f93326c51162f90caca55a8a4b3027133173f351bd1233c956c8 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,314 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.5-py3-none-any.whl#sha256=0ae97d57b5639ff0c414fb5463592d1b45eddd988d56f4cbe4e65ea916ea437d (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,315 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.4-py3-none-any.whl#sha256=a10c404acfd4a1d92502d8404b36e3377801b6faeb87ed1f749eb92d78e090c8 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,315 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.3-py3-none-any.whl#sha256=8ef1c74376080b280375c218946863877c7cb49b32f08e54b77038c5c2d5f67f (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,316 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.2-py3-none-any.whl#sha256=4b8c2d9e535f399f9e613b156a924f07bcb3f5d4d081173348c956b7afa14127 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,316 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.1-py3-none-any.whl#sha256=cbfb8ec354e15861ed2432a6c7751357871c1e01e41f6d1e5c0318f0600eb7bc (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,317 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.1.0-py3-none-any.whl#sha256=b50ee3d4d55b762fe4bd50428bf150f92ed42d2bc1b16ccfc99abfbbd0ebcac1 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,317 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.0.36-py3-none-any.whl#sha256=dfdcf6870899b2631c3b5c8490fc7be4c3a202b221e0d72c4fc7cb160fd19359 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,318 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.0.35-py3-none-any.whl#sha256=5399fc56af1b551a3a060c8a3cd2b51b42b260da6d3b9e1998df02d102c993d0 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,318 Skipping link: No binaries permitted for starfish: 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https://www.piwheels.org/simple/starfish/starfish-0.0.3-py3-none-any.whl#sha256=3d802475d3e0c1d46ebb6880aa39d11c141dd135abdbb392ed09272d144f2cc1 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,332 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.0.2-py3-none-any.whl#sha256=cef89ea54614ccea71a531a804b8be0a93a0e9a7fa8a551657aac5122dfa2309 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,333 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.0.0a1-py3-none-any.whl#sha256=bd3e716eb37bfc003b63c953dc8c56de9a5af57a3100483645abfdb2fd6094c2 (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,333 Skipping link: No binaries permitted for starfish: https://www.piwheels.org/simple/starfish/starfish-0.0.0a0-py3-none-any.whl#sha256=4b01ef557ca9f870cf8a70eedc8735d845bf6db1dda1d8e5ec179a8b49f8b08f (from https://www.piwheels.org/simple/starfish/) 2024-10-07T04:01:23,334 Skipping link: not a file: https://www.piwheels.org/simple/starfish/ 2024-10-07T04:01:23,334 Skipping link: not a file: https://pypi.org/simple/starfish/ 2024-10-07T04:01:23,359 Given no hashes to check 1 links for project 'starfish': discarding no candidates 2024-10-07T04:01:23,361 Collecting starfish==0.3.0 2024-10-07T04:01:23,363 Created temporary directory: /tmp/pip-unpack-cwnr8aip 2024-10-07T04:01:23,502 Downloading starfish-0.3.0.tar.gz (272 kB) 2024-10-07T04:01:24,274 Added starfish==0.3.0 from https://files.pythonhosted.org/packages/16/b8/7a8240c6d52bf613bdab14a1768bd11a7d2c608927609800e041a690ab16/starfish-0.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-jraahegg' 2024-10-07T04:01:24,277 Running setup.py (path:/tmp/pip-wheel-xyxrzjny/starfish_d737db58902d42b3944ec2d1ec6ab41b/setup.py) egg_info for package starfish 2024-10-07T04:01:24,278 Created temporary directory: /tmp/pip-pip-egg-info-pz1dg36h 2024-10-07T04:01:24,279 Preparing metadata (setup.py): started 2024-10-07T04:01:24,281 Running command python setup.py egg_info 2024-10-07T04:01:25,533 running egg_info 2024-10-07T04:01:25,535 creating /tmp/pip-pip-egg-info-pz1dg36h/starfish.egg-info 2024-10-07T04:01:25,562 writing /tmp/pip-pip-egg-info-pz1dg36h/starfish.egg-info/PKG-INFO 2024-10-07T04:01:25,566 writing dependency_links to /tmp/pip-pip-egg-info-pz1dg36h/starfish.egg-info/dependency_links.txt 2024-10-07T04:01:25,568 writing entry points to /tmp/pip-pip-egg-info-pz1dg36h/starfish.egg-info/entry_points.txt 2024-10-07T04:01:25,570 writing requirements to /tmp/pip-pip-egg-info-pz1dg36h/starfish.egg-info/requires.txt 2024-10-07T04:01:25,571 writing top-level names to /tmp/pip-pip-egg-info-pz1dg36h/starfish.egg-info/top_level.txt 2024-10-07T04:01:25,573 writing manifest file '/tmp/pip-pip-egg-info-pz1dg36h/starfish.egg-info/SOURCES.txt' 2024-10-07T04:01:25,702 reading manifest file '/tmp/pip-pip-egg-info-pz1dg36h/starfish.egg-info/SOURCES.txt' 2024-10-07T04:01:25,704 reading manifest template 'MANIFEST.in' 2024-10-07T04:01:25,725 adding license file 'LICENSE' 2024-10-07T04:01:25,737 writing manifest file '/tmp/pip-pip-egg-info-pz1dg36h/starfish.egg-info/SOURCES.txt' 2024-10-07T04:01:25,852 Preparing metadata (setup.py): finished with status 'done' 2024-10-07T04:01:25,856 Source in /tmp/pip-wheel-xyxrzjny/starfish_d737db58902d42b3944ec2d1ec6ab41b has version 0.3.0, which satisfies requirement starfish==0.3.0 from https://files.pythonhosted.org/packages/16/b8/7a8240c6d52bf613bdab14a1768bd11a7d2c608927609800e041a690ab16/starfish-0.3.0.tar.gz 2024-10-07T04:01:25,857 Removed starfish==0.3.0 from https://files.pythonhosted.org/packages/16/b8/7a8240c6d52bf613bdab14a1768bd11a7d2c608927609800e041a690ab16/starfish-0.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-jraahegg' 2024-10-07T04:01:25,867 Created temporary directory: /tmp/pip-unpack-ah4a3403 2024-10-07T04:01:25,868 Created temporary directory: /tmp/pip-unpack-6gwdwncm 2024-10-07T04:01:25,868 Building wheels for collected packages: starfish 2024-10-07T04:01:25,872 Created temporary directory: /tmp/pip-wheel-e6uhkkp8 2024-10-07T04:01:25,873 Building wheel for starfish (setup.py): started 2024-10-07T04:01:25,874 Destination directory: /tmp/pip-wheel-e6uhkkp8 2024-10-07T04:01:25,875 Running command python setup.py bdist_wheel 2024-10-07T04:01:27,048 running bdist_wheel 2024-10-07T04:01:27,184 running build 2024-10-07T04:01:27,185 running build_py 2024-10-07T04:01:27,191 creating build/lib/starfish 2024-10-07T04:01:27,193 copying starfish/types.py -> build/lib/starfish 2024-10-07T04:01:27,195 copying starfish/__init__.py -> build/lib/starfish 2024-10-07T04:01:27,197 copying starfish/spots.py -> build/lib/starfish 2024-10-07T04:01:27,199 copying starfish/data.py -> build/lib/starfish 2024-10-07T04:01:27,201 copying starfish/morphology.py -> build/lib/starfish 2024-10-07T04:01:27,203 copying starfish/__main__.py -> build/lib/starfish 2024-10-07T04:01:27,205 copying starfish/config.py -> build/lib/starfish 2024-10-07T04:01:27,207 copying starfish/image.py -> build/lib/starfish 2024-10-07T04:01:27,208 copying starfish/test.py -> build/lib/starfish 2024-10-07T04:01:27,211 creating build/lib/starfish/core 2024-10-07T04:01:27,212 copying starfish/core/compat.py -> build/lib/starfish/core 2024-10-07T04:01:27,215 copying starfish/core/_display.py -> build/lib/starfish/core 2024-10-07T04:01:27,217 copying starfish/core/_version.py -> build/lib/starfish/core 2024-10-07T04:01:27,219 copying starfish/core/__init__.py -> build/lib/starfish/core 2024-10-07T04:01:27,221 copying starfish/core/starfish.py -> build/lib/starfish/core 2024-10-07T04:01:27,223 copying starfish/core/errors.py -> build/lib/starfish/core 2024-10-07T04:01:27,225 creating build/lib/starfish/experiment 2024-10-07T04:01:27,226 copying starfish/experiment/builder.py -> build/lib/starfish/experiment 2024-10-07T04:01:27,228 copying starfish/experiment/__init__.py -> build/lib/starfish/experiment 2024-10-07T04:01:27,230 creating build/lib/starfish/test 2024-10-07T04:01:27,231 copying starfish/test/__init__.py -> build/lib/starfish/test 2024-10-07T04:01:27,233 creating build/lib/starfish/util 2024-10-07T04:01:27,234 copying starfish/util/__init__.py -> build/lib/starfish/util 2024-10-07T04:01:27,236 copying starfish/util/plot.py -> build/lib/starfish/util 2024-10-07T04:01:27,239 creating build/lib/starfish/core/segmentation_mask 2024-10-07T04:01:27,240 copying starfish/core/segmentation_mask/__init__.py -> build/lib/starfish/core/segmentation_mask 2024-10-07T04:01:27,242 copying starfish/core/segmentation_mask/segmentation_mask.py -> build/lib/starfish/core/segmentation_mask 2024-10-07T04:01:27,245 creating build/lib/starfish/core/experiment 2024-10-07T04:01:27,246 copying starfish/core/experiment/__init__.py -> build/lib/starfish/core/experiment 2024-10-07T04:01:27,248 copying starfish/core/experiment/version.py -> build/lib/starfish/core/experiment 2024-10-07T04:01:27,250 copying starfish/core/experiment/experiment.py -> build/lib/starfish/core/experiment 2024-10-07T04:01:27,253 creating build/lib/starfish/core/types 2024-10-07T04:01:27,254 copying starfish/core/types/__init__.py -> build/lib/starfish/core/types 2024-10-07T04:01:27,256 copying starfish/core/types/_decoded_spots.py -> build/lib/starfish/core/types 2024-10-07T04:01:27,258 copying starfish/core/types/_functionsource.py -> build/lib/starfish/core/types 2024-10-07T04:01:27,260 copying starfish/core/types/_constants.py -> build/lib/starfish/core/types 2024-10-07T04:01:27,262 copying starfish/core/types/_validated_table.py -> build/lib/starfish/core/types 2024-10-07T04:01:27,264 copying starfish/core/types/_spot_attributes.py -> build/lib/starfish/core/types 2024-10-07T04:01:27,266 copying starfish/core/types/_spot_finding_results.py -> build/lib/starfish/core/types 2024-10-07T04:01:27,269 creating build/lib/starfish/core/expression_matrix 2024-10-07T04:01:27,270 copying starfish/core/expression_matrix/__init__.py -> build/lib/starfish/core/expression_matrix 2024-10-07T04:01:27,271 copying starfish/core/expression_matrix/expression_matrix.py -> build/lib/starfish/core/expression_matrix 2024-10-07T04:01:27,273 copying starfish/core/expression_matrix/concatenate.py -> build/lib/starfish/core/expression_matrix 2024-10-07T04:01:27,275 creating build/lib/starfish/core/test 2024-10-07T04:01:27,276 copying starfish/core/test/factories.py -> build/lib/starfish/core/test 2024-10-07T04:01:27,279 copying starfish/core/test/__init__.py -> build/lib/starfish/core/test 2024-10-07T04:01:27,281 copying starfish/core/test/test_display.py -> build/lib/starfish/core/test 2024-10-07T04:01:27,282 copying starfish/core/test/test_multiprocessing_workflow.py -> build/lib/starfish/core/test 2024-10-07T04:01:27,285 copying starfish/core/test/test_synthetic_spot_creation.py -> build/lib/starfish/core/test 2024-10-07T04:01:27,287 creating build/lib/starfish/core/morphology 2024-10-07T04:01:27,288 copying starfish/core/morphology/__init__.py -> build/lib/starfish/core/morphology 2024-10-07T04:01:27,290 copying starfish/core/morphology/util.py -> build/lib/starfish/core/morphology 2024-10-07T04:01:27,292 creating build/lib/starfish/core/pipeline 2024-10-07T04:01:27,293 copying starfish/core/pipeline/__init__.py -> build/lib/starfish/core/pipeline 2024-10-07T04:01:27,295 copying starfish/core/pipeline/algorithmbase.py -> build/lib/starfish/core/pipeline 2024-10-07T04:01:27,297 creating build/lib/starfish/core/config 2024-10-07T04:01:27,298 copying starfish/core/config/__init__.py -> build/lib/starfish/core/config 2024-10-07T04:01:27,301 creating build/lib/starfish/core/util 2024-10-07T04:01:27,302 copying starfish/core/util/exec.py -> build/lib/starfish/core/util 2024-10-07T04:01:27,304 copying starfish/core/util/levels.py -> build/lib/starfish/core/util 2024-10-07T04:01:27,307 copying starfish/core/util/__init__.py -> build/lib/starfish/core/util 2024-10-07T04:01:27,308 copying starfish/core/util/logging.py -> build/lib/starfish/core/util 2024-10-07T04:01:27,310 copying starfish/core/util/argparse.py -> build/lib/starfish/core/util 2024-10-07T04:01:27,312 copying starfish/core/util/enum.py -> build/lib/starfish/core/util 2024-10-07T04:01:27,314 copying starfish/core/util/try_import.py -> build/lib/starfish/core/util 2024-10-07T04:01:27,316 copying starfish/core/util/clock.py -> build/lib/starfish/core/util 2024-10-07T04:01:27,318 copying starfish/core/util/config.py -> build/lib/starfish/core/util 2024-10-07T04:01:27,320 creating build/lib/starfish/core/image 2024-10-07T04:01:27,321 copying starfish/core/image/__init__.py -> build/lib/starfish/core/image 2024-10-07T04:01:27,323 creating build/lib/starfish/core/intensity_table 2024-10-07T04:01:27,325 copying starfish/core/intensity_table/overlap.py -> build/lib/starfish/core/intensity_table 2024-10-07T04:01:27,327 copying starfish/core/intensity_table/__init__.py -> build/lib/starfish/core/intensity_table 2024-10-07T04:01:27,329 copying starfish/core/intensity_table/intensity_table_coordinates.py -> build/lib/starfish/core/intensity_table 2024-10-07T04:01:27,331 copying starfish/core/intensity_table/intensity_table.py -> build/lib/starfish/core/intensity_table 2024-10-07T04:01:27,333 copying starfish/core/intensity_table/concatenate.py -> build/lib/starfish/core/intensity_table 2024-10-07T04:01:27,335 copying starfish/core/intensity_table/decoded_intensity_table.py -> build/lib/starfish/core/intensity_table 2024-10-07T04:01:27,338 creating build/lib/starfish/core/spots 2024-10-07T04:01:27,339 copying starfish/core/spots/__init__.py -> build/lib/starfish/core/spots 2024-10-07T04:01:27,341 creating build/lib/starfish/core/codebook 2024-10-07T04:01:27,342 copying starfish/core/codebook/codebook.py -> build/lib/starfish/core/codebook 2024-10-07T04:01:27,345 copying starfish/core/codebook/_format.py -> build/lib/starfish/core/codebook 2024-10-07T04:01:27,347 copying starfish/core/codebook/__init__.py -> build/lib/starfish/core/codebook 2024-10-07T04:01:27,349 creating build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,351 copying starfish/core/spacetx_format/cli.py -> build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,353 copying starfish/core/spacetx_format/test_field_of_view.py -> build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,354 copying starfish/core/spacetx_format/validate_sptx.py -> build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,357 copying starfish/core/spacetx_format/__init__.py -> build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,358 copying starfish/core/spacetx_format/test_codebook.py -> build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,361 copying starfish/core/spacetx_format/util.py -> build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,364 copying starfish/core/spacetx_format/test_fuzz.py -> build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,366 copying starfish/core/spacetx_format/test_experiment.py -> build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,369 copying starfish/core/spacetx_format/test_fov_manifest.py -> build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,371 copying starfish/core/spacetx_format/test_coordinates.py -> build/lib/starfish/core/spacetx_format 2024-10-07T04:01:27,374 creating build/lib/starfish/core/imagestack 2024-10-07T04:01:27,376 copying starfish/core/imagestack/__init__.py -> build/lib/starfish/core/imagestack 2024-10-07T04:01:27,378 copying starfish/core/imagestack/dataorder.py -> build/lib/starfish/core/imagestack 2024-10-07T04:01:27,382 copying starfish/core/imagestack/indexing_utils.py -> build/lib/starfish/core/imagestack 2024-10-07T04:01:27,385 copying starfish/core/imagestack/physical_coordinates.py -> build/lib/starfish/core/imagestack 2024-10-07T04:01:27,387 copying starfish/core/imagestack/imagestack.py -> build/lib/starfish/core/imagestack 2024-10-07T04:01:27,391 creating build/lib/starfish/core/experiment/test 2024-10-07T04:01:27,392 copying starfish/core/experiment/test/test_version.py -> build/lib/starfish/core/experiment/test 2024-10-07T04:01:27,394 copying starfish/core/experiment/test/__init__.py -> build/lib/starfish/core/experiment/test 2024-10-07T04:01:27,395 copying starfish/core/experiment/test/test_experiment.py -> build/lib/starfish/core/experiment/test 2024-10-07T04:01:27,399 creating build/lib/starfish/core/experiment/builder 2024-10-07T04:01:27,400 copying starfish/core/experiment/builder/builder.py -> build/lib/starfish/core/experiment/builder 2024-10-07T04:01:27,403 copying starfish/core/experiment/builder/__init__.py -> build/lib/starfish/core/experiment/builder 2024-10-07T04:01:27,404 copying starfish/core/experiment/builder/providers.py -> build/lib/starfish/core/experiment/builder 2024-10-07T04:01:27,406 copying starfish/core/experiment/builder/defaultproviders.py -> build/lib/starfish/core/experiment/builder 2024-10-07T04:01:27,409 copying starfish/core/experiment/builder/orderediterator.py -> build/lib/starfish/core/experiment/builder 2024-10-07T04:01:27,411 copying starfish/core/experiment/builder/inplace.py -> build/lib/starfish/core/experiment/builder 2024-10-07T04:01:27,412 copying starfish/core/experiment/builder/structured_formatter.py -> build/lib/starfish/core/experiment/builder 2024-10-07T04:01:27,416 creating build/lib/starfish/core/experiment/builder/test 2024-10-07T04:01:27,417 copying starfish/core/experiment/builder/test/test_orderediterator.py -> build/lib/starfish/core/experiment/builder/test 2024-10-07T04:01:27,419 copying starfish/core/experiment/builder/test/__init__.py -> build/lib/starfish/core/experiment/builder/test 2024-10-07T04:01:27,421 copying starfish/core/experiment/builder/test/test_small_axis.py -> build/lib/starfish/core/experiment/builder/test 2024-10-07T04:01:27,423 copying starfish/core/experiment/builder/test/test_inplace.py -> build/lib/starfish/core/experiment/builder/test 2024-10-07T04:01:27,426 creating build/lib/starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:27,427 copying starfish/core/experiment/builder/test/structured_formatter/test_multiple_fov.py -> build/lib/starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:27,429 copying starfish/core/experiment/builder/test/structured_formatter/test_single_fov.py -> build/lib/starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:27,431 copying starfish/core/experiment/builder/test/structured_formatter/__init__.py -> build/lib/starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:27,433 copying starfish/core/experiment/builder/test/structured_formatter/util.py -> build/lib/starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:27,435 copying starfish/core/experiment/builder/test/structured_formatter/test_tilepath.py -> build/lib/starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:27,438 creating build/lib/starfish/core/experiment/builder/test/factories 2024-10-07T04:01:27,439 copying starfish/core/experiment/builder/test/factories/all_purpose.py -> build/lib/starfish/core/experiment/builder/test/factories 2024-10-07T04:01:27,441 copying starfish/core/experiment/builder/test/factories/__init__.py -> build/lib/starfish/core/experiment/builder/test/factories 2024-10-07T04:01:27,443 copying starfish/core/experiment/builder/test/factories/unique_tiles.py -> build/lib/starfish/core/experiment/builder/test/factories 2024-10-07T04:01:27,446 creating build/lib/starfish/core/types/test 2024-10-07T04:01:27,447 copying starfish/core/types/test/__init__.py -> build/lib/starfish/core/types/test 2024-10-07T04:01:27,449 copying starfish/core/types/test/test_decoded_spots.py -> build/lib/starfish/core/types/test 2024-10-07T04:01:27,450 copying starfish/core/types/test/test_saving_spots.py -> build/lib/starfish/core/types/test 2024-10-07T04:01:27,453 creating build/lib/starfish/core/expression_matrix/test 2024-10-07T04:01:27,454 copying starfish/core/expression_matrix/test/__init__.py -> build/lib/starfish/core/expression_matrix/test 2024-10-07T04:01:27,456 copying starfish/core/expression_matrix/test/test_concatenate.py -> build/lib/starfish/core/expression_matrix/test 2024-10-07T04:01:27,458 copying starfish/core/expression_matrix/test/test_serialization.py -> build/lib/starfish/core/expression_matrix/test 2024-10-07T04:01:27,460 creating build/lib/starfish/core/morphology/label_image 2024-10-07T04:01:27,461 copying starfish/core/morphology/label_image/__init__.py -> build/lib/starfish/core/morphology/label_image 2024-10-07T04:01:27,463 copying starfish/core/morphology/label_image/label_image.py -> build/lib/starfish/core/morphology/label_image 2024-10-07T04:01:27,466 creating build/lib/starfish/core/morphology/Segment 2024-10-07T04:01:27,467 copying starfish/core/morphology/Segment/_base.py -> build/lib/starfish/core/morphology/Segment 2024-10-07T04:01:27,470 copying starfish/core/morphology/Segment/__init__.py -> build/lib/starfish/core/morphology/Segment 2024-10-07T04:01:27,472 copying starfish/core/morphology/Segment/watershed.py -> build/lib/starfish/core/morphology/Segment 2024-10-07T04:01:27,474 creating build/lib/starfish/core/morphology/binary_mask 2024-10-07T04:01:27,475 copying starfish/core/morphology/binary_mask/binary_mask.py -> build/lib/starfish/core/morphology/binary_mask 2024-10-07T04:01:27,479 copying starfish/core/morphology/binary_mask/expand.py -> build/lib/starfish/core/morphology/binary_mask 2024-10-07T04:01:27,481 copying starfish/core/morphology/binary_mask/_io.py -> build/lib/starfish/core/morphology/binary_mask 2024-10-07T04:01:27,483 copying starfish/core/morphology/binary_mask/__init__.py -> build/lib/starfish/core/morphology/binary_mask 2024-10-07T04:01:27,486 creating build/lib/starfish/core/morphology/Merge 2024-10-07T04:01:27,487 copying starfish/core/morphology/Merge/_base.py -> build/lib/starfish/core/morphology/Merge 2024-10-07T04:01:27,488 copying starfish/core/morphology/Merge/__init__.py -> build/lib/starfish/core/morphology/Merge 2024-10-07T04:01:27,490 copying starfish/core/morphology/Merge/simple.py -> build/lib/starfish/core/morphology/Merge 2024-10-07T04:01:27,492 creating build/lib/starfish/core/morphology/Binarize 2024-10-07T04:01:27,493 copying starfish/core/morphology/Binarize/_base.py -> build/lib/starfish/core/morphology/Binarize 2024-10-07T04:01:27,495 copying starfish/core/morphology/Binarize/__init__.py -> build/lib/starfish/core/morphology/Binarize 2024-10-07T04:01:27,497 copying starfish/core/morphology/Binarize/threshold.py -> build/lib/starfish/core/morphology/Binarize 2024-10-07T04:01:27,500 creating build/lib/starfish/core/morphology/Filter 2024-10-07T04:01:27,501 copying starfish/core/morphology/Filter/reduce.py -> build/lib/starfish/core/morphology/Filter 2024-10-07T04:01:27,503 copying starfish/core/morphology/Filter/_base.py -> build/lib/starfish/core/morphology/Filter 2024-10-07T04:01:27,505 copying starfish/core/morphology/Filter/__init__.py -> build/lib/starfish/core/morphology/Filter 2024-10-07T04:01:27,506 copying starfish/core/morphology/Filter/map.py -> build/lib/starfish/core/morphology/Filter 2024-10-07T04:01:27,508 copying starfish/core/morphology/Filter/min_distance_label.py -> build/lib/starfish/core/morphology/Filter 2024-10-07T04:01:27,510 copying starfish/core/morphology/Filter/areafilter.py -> build/lib/starfish/core/morphology/Filter 2024-10-07T04:01:27,512 copying starfish/core/morphology/Filter/structural_label.py -> build/lib/starfish/core/morphology/Filter 2024-10-07T04:01:27,514 creating build/lib/starfish/core/morphology/label_image/test 2024-10-07T04:01:27,515 copying starfish/core/morphology/label_image/test/__init__.py -> build/lib/starfish/core/morphology/label_image/test 2024-10-07T04:01:27,517 copying starfish/core/morphology/label_image/test/test_label_image.py -> build/lib/starfish/core/morphology/label_image/test 2024-10-07T04:01:27,520 creating build/lib/starfish/core/morphology/binary_mask/test 2024-10-07T04:01:27,521 copying starfish/core/morphology/binary_mask/test/test_binary_mask.py -> build/lib/starfish/core/morphology/binary_mask/test 2024-10-07T04:01:27,523 copying starfish/core/morphology/binary_mask/test/test_from_binary_arrays_and_ticks.py -> build/lib/starfish/core/morphology/binary_mask/test 2024-10-07T04:01:27,526 copying starfish/core/morphology/binary_mask/test/factories.py -> build/lib/starfish/core/morphology/binary_mask/test 2024-10-07T04:01:27,527 copying starfish/core/morphology/binary_mask/test/__init__.py -> build/lib/starfish/core/morphology/binary_mask/test 2024-10-07T04:01:27,529 copying starfish/core/morphology/binary_mask/test/test_from_label_array_and_ticks.py -> build/lib/starfish/core/morphology/binary_mask/test 2024-10-07T04:01:27,532 copying starfish/core/morphology/binary_mask/test/test_expand.py -> build/lib/starfish/core/morphology/binary_mask/test 2024-10-07T04:01:27,534 creating build/lib/starfish/core/morphology/Merge/test 2024-10-07T04:01:27,535 copying starfish/core/morphology/Merge/test/__init__.py -> build/lib/starfish/core/morphology/Merge/test 2024-10-07T04:01:27,537 copying starfish/core/morphology/Merge/test/test_simple.py -> build/lib/starfish/core/morphology/Merge/test 2024-10-07T04:01:27,539 creating build/lib/starfish/core/morphology/Binarize/test 2024-10-07T04:01:27,541 copying starfish/core/morphology/Binarize/test/__init__.py -> build/lib/starfish/core/morphology/Binarize/test 2024-10-07T04:01:27,542 copying starfish/core/morphology/Binarize/test/test_threshold.py -> build/lib/starfish/core/morphology/Binarize/test 2024-10-07T04:01:27,545 creating build/lib/starfish/core/morphology/Filter/test 2024-10-07T04:01:27,546 copying starfish/core/morphology/Filter/test/__init__.py -> build/lib/starfish/core/morphology/Filter/test 2024-10-07T04:01:27,548 copying starfish/core/morphology/Filter/test/test_reduce.py -> build/lib/starfish/core/morphology/Filter/test 2024-10-07T04:01:27,549 copying starfish/core/morphology/Filter/test/test_areafilter.py -> build/lib/starfish/core/morphology/Filter/test 2024-10-07T04:01:27,551 copying starfish/core/morphology/Filter/test/test_map.py -> build/lib/starfish/core/morphology/Filter/test 2024-10-07T04:01:27,553 creating build/lib/starfish/core/config/test 2024-10-07T04:01:27,555 copying starfish/core/config/test/__init__.py -> build/lib/starfish/core/config/test 2024-10-07T04:01:27,556 copying starfish/core/config/test/test_config.py -> build/lib/starfish/core/config/test 2024-10-07T04:01:27,559 creating build/lib/starfish/core/util/test 2024-10-07T04:01:27,560 copying starfish/core/util/test/test_preserve_float_range.py -> build/lib/starfish/core/util/test 2024-10-07T04:01:27,563 copying starfish/core/util/test/__init__.py -> build/lib/starfish/core/util/test 2024-10-07T04:01:27,564 copying starfish/core/util/test/test_levels.py -> build/lib/starfish/core/util/test 2024-10-07T04:01:27,567 creating build/lib/starfish/core/util/click 2024-10-07T04:01:27,568 copying starfish/core/util/click/__init__.py -> build/lib/starfish/core/util/click 2024-10-07T04:01:27,571 creating build/lib/starfish/core/image/Segment 2024-10-07T04:01:27,572 copying starfish/core/image/Segment/_base.py -> build/lib/starfish/core/image/Segment 2024-10-07T04:01:27,574 copying starfish/core/image/Segment/__init__.py -> build/lib/starfish/core/image/Segment 2024-10-07T04:01:27,576 copying starfish/core/image/Segment/watershed.py -> build/lib/starfish/core/image/Segment 2024-10-07T04:01:27,579 creating build/lib/starfish/core/image/_registration 2024-10-07T04:01:27,580 copying starfish/core/image/_registration/transforms_list.py -> build/lib/starfish/core/image/_registration 2024-10-07T04:01:27,583 copying starfish/core/image/_registration/_format.py -> build/lib/starfish/core/image/_registration 2024-10-07T04:01:27,585 copying starfish/core/image/_registration/__init__.py -> build/lib/starfish/core/image/_registration 2024-10-07T04:01:27,587 creating build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,588 copying starfish/core/image/Filter/clip_percentile_to_zero.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,591 copying starfish/core/image/Filter/reduce.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,593 copying starfish/core/image/Filter/ilastik_pre_trained_probability.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,596 copying starfish/core/image/Filter/laplace.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,598 copying starfish/core/image/Filter/bandpass.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,600 copying starfish/core/image/Filter/clip_value_to_zero.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,602 copying starfish/core/image/Filter/_base.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,604 copying starfish/core/image/Filter/__init__.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,606 copying starfish/core/image/Filter/clip.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,608 copying starfish/core/image/Filter/element_wise_mult.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,610 copying starfish/core/image/Filter/match_histograms.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,612 copying starfish/core/image/Filter/linear_unmixing.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,614 copying starfish/core/image/Filter/white_tophat.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,616 copying starfish/core/image/Filter/util.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,618 copying starfish/core/image/Filter/gaussian_high_pass.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,621 copying starfish/core/image/Filter/zero_by_channel_magnitude.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,623 copying starfish/core/image/Filter/map.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,625 copying starfish/core/image/Filter/call_bases.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,627 copying starfish/core/image/Filter/mean_high_pass.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,629 copying starfish/core/image/Filter/richardson_lucy_deconvolution.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,631 copying starfish/core/image/Filter/gaussian_low_pass.py -> build/lib/starfish/core/image/Filter 2024-10-07T04:01:27,634 creating build/lib/starfish/core/image/_registration/test 2024-10-07T04:01:27,635 copying starfish/core/image/_registration/test/__init__.py -> build/lib/starfish/core/image/_registration/test 2024-10-07T04:01:27,637 copying starfish/core/image/_registration/test/test_transforms_list.py -> build/lib/starfish/core/image/_registration/test 2024-10-07T04:01:27,640 creating build/lib/starfish/core/image/_registration/ApplyTransform 2024-10-07T04:01:27,641 copying starfish/core/image/_registration/ApplyTransform/_base.py -> build/lib/starfish/core/image/_registration/ApplyTransform 2024-10-07T04:01:27,643 copying starfish/core/image/_registration/ApplyTransform/__init__.py -> build/lib/starfish/core/image/_registration/ApplyTransform 2024-10-07T04:01:27,644 copying starfish/core/image/_registration/ApplyTransform/warp.py -> build/lib/starfish/core/image/_registration/ApplyTransform 2024-10-07T04:01:27,647 creating build/lib/starfish/core/image/_registration/LearnTransform 2024-10-07T04:01:27,648 copying starfish/core/image/_registration/LearnTransform/_base.py -> build/lib/starfish/core/image/_registration/LearnTransform 2024-10-07T04:01:27,650 copying starfish/core/image/_registration/LearnTransform/__init__.py -> build/lib/starfish/core/image/_registration/LearnTransform 2024-10-07T04:01:27,651 copying starfish/core/image/_registration/LearnTransform/translation.py -> build/lib/starfish/core/image/_registration/LearnTransform 2024-10-07T04:01:27,654 creating build/lib/starfish/core/image/_registration/ApplyTransform/test 2024-10-07T04:01:27,655 copying starfish/core/image/_registration/ApplyTransform/test/__init__.py -> build/lib/starfish/core/image/_registration/ApplyTransform/test 2024-10-07T04:01:27,657 copying starfish/core/image/_registration/ApplyTransform/test/test_warp.py -> build/lib/starfish/core/image/_registration/ApplyTransform/test 2024-10-07T04:01:27,659 creating build/lib/starfish/core/image/_registration/LearnTransform/test 2024-10-07T04:01:27,660 copying starfish/core/image/_registration/LearnTransform/test/__init__.py -> build/lib/starfish/core/image/_registration/LearnTransform/test 2024-10-07T04:01:27,662 copying starfish/core/image/_registration/LearnTransform/test/test_translation.py -> build/lib/starfish/core/image/_registration/LearnTransform/test 2024-10-07T04:01:27,665 creating build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,666 copying starfish/core/image/Filter/test/test_call_bases.py -> build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,668 copying starfish/core/image/Filter/test/test_filter.py -> build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,670 copying starfish/core/image/Filter/test/__init__.py -> build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,672 copying starfish/core/image/Filter/test/test_reduce.py -> build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,674 copying starfish/core/image/Filter/test/test_linear_unmixing.py -> build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,676 copying starfish/core/image/Filter/test/test_white_tophat.py -> build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,678 copying starfish/core/image/Filter/test/test_zero_by_channel_magnitude.py -> build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,680 copying starfish/core/image/Filter/test/test_map.py -> build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,682 copying starfish/core/image/Filter/test/test_api_contract.py -> build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,684 copying starfish/core/image/Filter/test/test_histogram_matching.py -> build/lib/starfish/core/image/Filter/test 2024-10-07T04:01:27,687 creating build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,688 copying starfish/core/intensity_table/test/factories.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,690 copying starfish/core/intensity_table/test/test_intensity_table_serialization.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,692 copying starfish/core/intensity_table/test/__init__.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,693 copying starfish/core/intensity_table/test/test_concatenate.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,695 copying starfish/core/intensity_table/test/test_to_mermaid.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,697 copying starfish/core/intensity_table/test/test_from_spot_data.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,699 copying starfish/core/intensity_table/test/test_stack_intensity_table_reshaping.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,701 copying starfish/core/intensity_table/test/test_overlap.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,703 copying starfish/core/intensity_table/test/test_intensity_table_coords.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,706 copying starfish/core/intensity_table/test/test_synthetic_intensities.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,708 copying starfish/core/intensity_table/test/test_from_imagestack.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,710 copying starfish/core/intensity_table/test/test_empty_intensity_table.py -> build/lib/starfish/core/intensity_table/test 2024-10-07T04:01:27,712 creating build/lib/starfish/core/spots/AssignTargets 2024-10-07T04:01:27,713 copying starfish/core/spots/AssignTargets/label.py -> build/lib/starfish/core/spots/AssignTargets 2024-10-07T04:01:27,715 copying starfish/core/spots/AssignTargets/_base.py -> build/lib/starfish/core/spots/AssignTargets 2024-10-07T04:01:27,717 copying starfish/core/spots/AssignTargets/__init__.py -> build/lib/starfish/core/spots/AssignTargets 2024-10-07T04:01:27,720 creating build/lib/starfish/core/spots/DetectPixels 2024-10-07T04:01:27,721 copying starfish/core/spots/DetectPixels/_base.py -> build/lib/starfish/core/spots/DetectPixels 2024-10-07T04:01:27,723 copying starfish/core/spots/DetectPixels/__init__.py -> build/lib/starfish/core/spots/DetectPixels 2024-10-07T04:01:27,725 copying starfish/core/spots/DetectPixels/pixel_spot_decoder.py -> build/lib/starfish/core/spots/DetectPixels 2024-10-07T04:01:27,727 copying starfish/core/spots/DetectPixels/combine_adjacent_features.py -> build/lib/starfish/core/spots/DetectPixels 2024-10-07T04:01:27,730 creating build/lib/starfish/core/spots/DecodeSpots 2024-10-07T04:01:27,731 copying starfish/core/spots/DecodeSpots/check_all_decoder.py -> build/lib/starfish/core/spots/DecodeSpots 2024-10-07T04:01:27,734 copying starfish/core/spots/DecodeSpots/simple_lookup_decoder.py -> build/lib/starfish/core/spots/DecodeSpots 2024-10-07T04:01:27,736 copying starfish/core/spots/DecodeSpots/_base.py -> build/lib/starfish/core/spots/DecodeSpots 2024-10-07T04:01:27,738 copying starfish/core/spots/DecodeSpots/__init__.py -> build/lib/starfish/core/spots/DecodeSpots 2024-10-07T04:01:27,740 copying starfish/core/spots/DecodeSpots/per_round_max_channel_decoder.py -> build/lib/starfish/core/spots/DecodeSpots 2024-10-07T04:01:27,742 copying starfish/core/spots/DecodeSpots/util.py -> build/lib/starfish/core/spots/DecodeSpots 2024-10-07T04:01:27,744 copying starfish/core/spots/DecodeSpots/trace_builders.py -> build/lib/starfish/core/spots/DecodeSpots 2024-10-07T04:01:27,746 copying starfish/core/spots/DecodeSpots/check_all_funcs.py -> build/lib/starfish/core/spots/DecodeSpots 2024-10-07T04:01:27,749 copying starfish/core/spots/DecodeSpots/metric_decoder.py -> build/lib/starfish/core/spots/DecodeSpots 2024-10-07T04:01:27,752 creating build/lib/starfish/core/spots/FindSpots 2024-10-07T04:01:27,753 copying starfish/core/spots/FindSpots/_base.py -> build/lib/starfish/core/spots/FindSpots 2024-10-07T04:01:27,755 copying starfish/core/spots/FindSpots/__init__.py -> build/lib/starfish/core/spots/FindSpots 2024-10-07T04:01:27,757 copying starfish/core/spots/FindSpots/blob.py -> build/lib/starfish/core/spots/FindSpots 2024-10-07T04:01:27,760 copying starfish/core/spots/FindSpots/local_max_peak_finder.py -> build/lib/starfish/core/spots/FindSpots 2024-10-07T04:01:27,762 copying starfish/core/spots/FindSpots/spot_finding_utils.py -> build/lib/starfish/core/spots/FindSpots 2024-10-07T04:01:27,765 copying starfish/core/spots/FindSpots/trackpy_local_max_peak_finder.py -> build/lib/starfish/core/spots/FindSpots 2024-10-07T04:01:27,768 creating build/lib/starfish/core/spots/DetectPixels/test 2024-10-07T04:01:27,769 copying starfish/core/spots/DetectPixels/test/test_targets_map.py -> build/lib/starfish/core/spots/DetectPixels/test 2024-10-07T04:01:27,771 copying starfish/core/spots/DetectPixels/test/test_calculate_mean_pixel_traces.py -> build/lib/starfish/core/spots/DetectPixels/test 2024-10-07T04:01:27,773 copying starfish/core/spots/DetectPixels/test/__init__.py -> build/lib/starfish/core/spots/DetectPixels/test 2024-10-07T04:01:27,775 copying starfish/core/spots/DetectPixels/test/test_intensities_to_decoded_image.py -> build/lib/starfish/core/spots/DetectPixels/test 2024-10-07T04:01:27,777 copying starfish/core/spots/DetectPixels/test/test_create_spot_attributes.py -> build/lib/starfish/core/spots/DetectPixels/test 2024-10-07T04:01:27,779 creating build/lib/starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:27,781 copying starfish/core/spots/DecodeSpots/test/test_nearest_neighbor_trace_builder.py -> build/lib/starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:27,783 copying starfish/core/spots/DecodeSpots/test/test_trace_builders.py -> build/lib/starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:27,785 copying starfish/core/spots/DecodeSpots/test/test_metric_decoder.py -> build/lib/starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:27,787 copying starfish/core/spots/DecodeSpots/test/test_composite_codebook.py -> build/lib/starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:27,790 copying starfish/core/spots/DecodeSpots/test/test_decoding_without_spots.py -> build/lib/starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:27,792 copying starfish/core/spots/DecodeSpots/test/__init__.py -> build/lib/starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:27,794 copying starfish/core/spots/DecodeSpots/test/test_check_all.py -> build/lib/starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:27,796 copying starfish/core/spots/DecodeSpots/test/test_spot_finders.py -> build/lib/starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:27,799 creating build/lib/starfish/core/spots/FindSpots/test 2024-10-07T04:01:27,801 copying starfish/core/spots/FindSpots/test/test_spot_detection.py -> build/lib/starfish/core/spots/FindSpots/test 2024-10-07T04:01:27,803 copying starfish/core/spots/FindSpots/test/test_synthetic_data.py -> build/lib/starfish/core/spots/FindSpots/test 2024-10-07T04:01:27,805 copying starfish/core/spots/FindSpots/test/__init__.py -> build/lib/starfish/core/spots/FindSpots/test 2024-10-07T04:01:27,807 copying starfish/core/spots/FindSpots/test/test_local_max_peak_finder.py -> build/lib/starfish/core/spots/FindSpots/test 2024-10-07T04:01:27,810 creating build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,811 copying starfish/core/codebook/test/test_synthetic_one_hot_codebook.py -> build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,813 copying starfish/core/codebook/test/test_from_code_array.py -> build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,816 copying starfish/core/codebook/test/test_to_json.py -> build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,818 copying starfish/core/codebook/test/factories.py -> build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,820 copying starfish/core/codebook/test/test_per_round_max_decode.py -> build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,822 copying starfish/core/codebook/test/__init__.py -> build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,823 copying starfish/core/codebook/test/test_approximate_nearest_code.py -> build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,825 copying starfish/core/codebook/test/test_metric_decode.py -> build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,827 copying starfish/core/codebook/test/test_normalize_code_traces.py -> build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,829 copying starfish/core/codebook/test/test_code_length.py -> build/lib/starfish/core/codebook/test 2024-10-07T04:01:27,832 creating build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,833 copying starfish/core/imagestack/test/test_slice_ops.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,835 copying starfish/core/imagestack/test/test_from_numpy_array.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,840 copying starfish/core/imagestack/test/test_metadata.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,842 copying starfish/core/imagestack/test/test_export.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,844 copying starfish/core/imagestack/test/__init__.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,845 copying starfish/core/imagestack/test/test_physical_coordinate_calculator.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,847 copying starfish/core/imagestack/test/test_cropped_load.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,850 copying starfish/core/imagestack/test/test_slicedimage_dtype.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,853 copying starfish/core/imagestack/test/test_apply.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,855 copying starfish/core/imagestack/test/test_index.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,858 copying starfish/core/imagestack/test/test_labeled_indices.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,860 copying starfish/core/imagestack/test/test_from_tilefetcher.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,862 copying starfish/core/imagestack/test/imagestack_test_utils.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,865 copying starfish/core/imagestack/test/test_coordinates.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,867 copying starfish/core/imagestack/test/test_max_proj.py -> build/lib/starfish/core/imagestack/test 2024-10-07T04:01:27,870 creating build/lib/starfish/core/imagestack/parser 2024-10-07T04:01:27,871 copying starfish/core/imagestack/parser/crop.py -> build/lib/starfish/core/imagestack/parser 2024-10-07T04:01:27,874 copying starfish/core/imagestack/parser/__init__.py -> build/lib/starfish/core/imagestack/parser 2024-10-07T04:01:27,876 copying starfish/core/imagestack/parser/_key.py -> build/lib/starfish/core/imagestack/parser 2024-10-07T04:01:27,878 copying starfish/core/imagestack/parser/_tiledata.py -> build/lib/starfish/core/imagestack/parser 2024-10-07T04:01:27,881 creating build/lib/starfish/core/imagestack/test/factories 2024-10-07T04:01:27,882 copying starfish/core/imagestack/test/factories/all_purpose.py -> build/lib/starfish/core/imagestack/test/factories 2024-10-07T04:01:27,885 copying starfish/core/imagestack/test/factories/synthetic_stack.py -> build/lib/starfish/core/imagestack/test/factories 2024-10-07T04:01:27,887 copying starfish/core/imagestack/test/factories/__init__.py -> build/lib/starfish/core/imagestack/test/factories 2024-10-07T04:01:27,889 copying starfish/core/imagestack/test/factories/with_coords.py -> build/lib/starfish/core/imagestack/test/factories 2024-10-07T04:01:27,891 copying starfish/core/imagestack/test/factories/unique_tiles.py -> build/lib/starfish/core/imagestack/test/factories 2024-10-07T04:01:27,893 copying starfish/core/imagestack/test/factories/from_codebook.py -> build/lib/starfish/core/imagestack/test/factories 2024-10-07T04:01:27,895 creating build/lib/starfish/core/imagestack/parser/tilefetcher 2024-10-07T04:01:27,897 copying starfish/core/imagestack/parser/tilefetcher/__init__.py -> build/lib/starfish/core/imagestack/parser/tilefetcher 2024-10-07T04:01:27,899 copying starfish/core/imagestack/parser/tilefetcher/_parser.py -> build/lib/starfish/core/imagestack/parser/tilefetcher 2024-10-07T04:01:27,902 creating build/lib/starfish/core/imagestack/parser/tileset 2024-10-07T04:01:27,904 copying starfish/core/imagestack/parser/tileset/__init__.py -> build/lib/starfish/core/imagestack/parser/tileset 2024-10-07T04:01:27,906 copying starfish/core/imagestack/parser/tileset/_parser.py -> build/lib/starfish/core/imagestack/parser/tileset 2024-10-07T04:01:27,909 creating build/lib/starfish/core/imagestack/parser/numpy 2024-10-07T04:01:27,910 copying starfish/core/imagestack/parser/numpy/__init__.py -> build/lib/starfish/core/imagestack/parser/numpy 2024-10-07T04:01:27,913 creating build/lib/starfish/test/full_pipelines 2024-10-07T04:01:27,915 copying starfish/test/full_pipelines/__init__.py -> build/lib/starfish/test/full_pipelines 2024-10-07T04:01:27,917 creating build/lib/starfish/test/full_pipelines/api 2024-10-07T04:01:27,918 copying starfish/test/full_pipelines/api/__init__.py -> build/lib/starfish/test/full_pipelines/api 2024-10-07T04:01:27,920 copying starfish/test/full_pipelines/api/test_dartfish.py -> build/lib/starfish/test/full_pipelines/api 2024-10-07T04:01:27,923 copying starfish/test/full_pipelines/api/test_iss_doc_pipeline.py -> build/lib/starfish/test/full_pipelines/api 2024-10-07T04:01:27,925 copying starfish/test/full_pipelines/api/test_allen_smFISH.py -> build/lib/starfish/test/full_pipelines/api 2024-10-07T04:01:27,927 copying starfish/test/full_pipelines/api/test_merfish.py -> build/lib/starfish/test/full_pipelines/api 2024-10-07T04:01:27,930 copying starfish/test/full_pipelines/api/test_iss_api.py -> build/lib/starfish/test/full_pipelines/api 2024-10-07T04:01:27,933 running egg_info 2024-10-07T04:01:27,961 writing starfish.egg-info/PKG-INFO 2024-10-07T04:01:27,965 writing dependency_links to starfish.egg-info/dependency_links.txt 2024-10-07T04:01:27,967 writing entry points to starfish.egg-info/entry_points.txt 2024-10-07T04:01:27,969 writing requirements to starfish.egg-info/requires.txt 2024-10-07T04:01:27,970 writing top-level names to starfish.egg-info/top_level.txt 2024-10-07T04:01:28,058 reading manifest file 'starfish.egg-info/SOURCES.txt' 2024-10-07T04:01:28,088 reading manifest template 'MANIFEST.in' 2024-10-07T04:01:28,113 adding license file 'LICENSE' 2024-10-07T04:01:28,141 writing manifest file 'starfish.egg-info/SOURCES.txt' 2024-10-07T04:01:28,151 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'starfish.spacetx_format.examples.codebook' is absent from the `packages` configuration. 2024-10-07T04:01:28,152 !! 2024-10-07T04:01:28,153 ******************************************************************************** 2024-10-07T04:01:28,154 ############################ 2024-10-07T04:01:28,155 # Package would be ignored # 2024-10-07T04:01:28,155 ############################ 2024-10-07T04:01:28,156 Python recognizes 'starfish.spacetx_format.examples.codebook' as an importable package[^1], 2024-10-07T04:01:28,157 but it is absent from setuptools' `packages` configuration. 2024-10-07T04:01:28,158 This leads to an ambiguous overall configuration. If you want to distribute this 2024-10-07T04:01:28,159 package, please make sure that 'starfish.spacetx_format.examples.codebook' is explicitly added 2024-10-07T04:01:28,160 to the `packages` configuration field. 2024-10-07T04:01:28,161 Alternatively, you can also rely on setuptools' discovery methods 2024-10-07T04:01:28,161 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-10-07T04:01:28,162 instead of `find_packages(...)`/`find:`). 2024-10-07T04:01:28,162 You can read more about "package discovery" on setuptools documentation page: 2024-10-07T04:01:28,163 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-10-07T04:01:28,164 If you don't want 'starfish.spacetx_format.examples.codebook' to be distributed and are 2024-10-07T04:01:28,165 already explicitly excluding 'starfish.spacetx_format.examples.codebook' via 2024-10-07T04:01:28,165 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-10-07T04:01:28,166 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-10-07T04:01:28,166 combination with a more fine grained `package-data` configuration. 2024-10-07T04:01:28,167 You can read more about "package data files" on setuptools documentation page: 2024-10-07T04:01:28,168 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-10-07T04:01:28,169 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-10-07T04:01:28,170 even if it does not contain any `.py` files. 2024-10-07T04:01:28,170 On the other hand, currently there is no concept of package data 2024-10-07T04:01:28,171 directory, all directories are treated like packages. 2024-10-07T04:01:28,171 ******************************************************************************** 2024-10-07T04:01:28,173 !! 2024-10-07T04:01:28,173 check.warn(importable) 2024-10-07T04:01:28,174 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'starfish.spacetx_format.examples.experiment' is absent from the `packages` configuration. 2024-10-07T04:01:28,174 !! 2024-10-07T04:01:28,175 ******************************************************************************** 2024-10-07T04:01:28,176 ############################ 2024-10-07T04:01:28,176 # Package would be ignored # 2024-10-07T04:01:28,177 ############################ 2024-10-07T04:01:28,177 Python recognizes 'starfish.spacetx_format.examples.experiment' as an importable package[^1], 2024-10-07T04:01:28,178 but it is absent from setuptools' `packages` configuration. 2024-10-07T04:01:28,179 This leads to an ambiguous overall configuration. If you want to distribute this 2024-10-07T04:01:28,179 package, please make sure that 'starfish.spacetx_format.examples.experiment' is explicitly added 2024-10-07T04:01:28,180 to the `packages` configuration field. 2024-10-07T04:01:28,181 Alternatively, you can also rely on setuptools' discovery methods 2024-10-07T04:01:28,181 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-10-07T04:01:28,182 instead of `find_packages(...)`/`find:`). 2024-10-07T04:01:28,183 You can read more about "package discovery" on setuptools documentation page: 2024-10-07T04:01:28,184 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-10-07T04:01:28,185 If you don't want 'starfish.spacetx_format.examples.experiment' to be distributed and are 2024-10-07T04:01:28,186 already explicitly excluding 'starfish.spacetx_format.examples.experiment' via 2024-10-07T04:01:28,186 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-10-07T04:01:28,187 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-10-07T04:01:28,188 combination with a more fine grained `package-data` configuration. 2024-10-07T04:01:28,189 You can read more about "package data files" on setuptools documentation page: 2024-10-07T04:01:28,190 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-10-07T04:01:28,191 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-10-07T04:01:28,191 even if it does not contain any `.py` files. 2024-10-07T04:01:28,192 On the other hand, currently there is no concept of package data 2024-10-07T04:01:28,192 directory, all directories are treated like packages. 2024-10-07T04:01:28,193 ******************************************************************************** 2024-10-07T04:01:28,194 !! 2024-10-07T04:01:28,194 check.warn(importable) 2024-10-07T04:01:28,195 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'starfish.spacetx_format.examples.field_of_view' is absent from the `packages` configuration. 2024-10-07T04:01:28,195 !! 2024-10-07T04:01:28,196 ******************************************************************************** 2024-10-07T04:01:28,197 ############################ 2024-10-07T04:01:28,197 # Package would be ignored # 2024-10-07T04:01:28,198 ############################ 2024-10-07T04:01:28,198 Python recognizes 'starfish.spacetx_format.examples.field_of_view' as an importable package[^1], 2024-10-07T04:01:28,198 but it is absent from setuptools' `packages` configuration. 2024-10-07T04:01:28,199 This leads to an ambiguous overall configuration. If you want to distribute this 2024-10-07T04:01:28,200 package, please make sure that 'starfish.spacetx_format.examples.field_of_view' is explicitly added 2024-10-07T04:01:28,200 to the `packages` configuration field. 2024-10-07T04:01:28,201 Alternatively, you can also rely on setuptools' discovery methods 2024-10-07T04:01:28,202 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-10-07T04:01:28,202 instead of `find_packages(...)`/`find:`). 2024-10-07T04:01:28,203 You can read more about "package discovery" on setuptools documentation page: 2024-10-07T04:01:28,204 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-10-07T04:01:28,205 If you don't want 'starfish.spacetx_format.examples.field_of_view' to be distributed and are 2024-10-07T04:01:28,206 already explicitly excluding 'starfish.spacetx_format.examples.field_of_view' via 2024-10-07T04:01:28,206 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-10-07T04:01:28,207 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-10-07T04:01:28,207 combination with a more fine grained `package-data` configuration. 2024-10-07T04:01:28,208 You can read more about "package data files" on setuptools documentation page: 2024-10-07T04:01:28,209 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-10-07T04:01:28,211 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-10-07T04:01:28,211 even if it does not contain any `.py` files. 2024-10-07T04:01:28,212 On the other hand, currently there is no concept of package data 2024-10-07T04:01:28,212 directory, all directories are treated like packages. 2024-10-07T04:01:28,213 ******************************************************************************** 2024-10-07T04:01:28,214 !! 2024-10-07T04:01:28,215 check.warn(importable) 2024-10-07T04:01:28,215 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'starfish.spacetx_format.examples.fov_manifest' is absent from the `packages` configuration. 2024-10-07T04:01:28,216 !! 2024-10-07T04:01:28,217 ******************************************************************************** 2024-10-07T04:01:28,217 ############################ 2024-10-07T04:01:28,218 # Package would be ignored # 2024-10-07T04:01:28,218 ############################ 2024-10-07T04:01:28,219 Python recognizes 'starfish.spacetx_format.examples.fov_manifest' as an importable package[^1], 2024-10-07T04:01:28,219 but it is absent from setuptools' `packages` configuration. 2024-10-07T04:01:28,220 This leads to an ambiguous overall configuration. If you want to distribute this 2024-10-07T04:01:28,220 package, please make sure that 'starfish.spacetx_format.examples.fov_manifest' is explicitly added 2024-10-07T04:01:28,221 to the `packages` configuration field. 2024-10-07T04:01:28,222 Alternatively, you can also rely on setuptools' discovery methods 2024-10-07T04:01:28,222 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-10-07T04:01:28,223 instead of `find_packages(...)`/`find:`). 2024-10-07T04:01:28,223 You can read more about "package discovery" on setuptools documentation page: 2024-10-07T04:01:28,225 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-10-07T04:01:28,226 If you don't want 'starfish.spacetx_format.examples.fov_manifest' to be distributed and are 2024-10-07T04:01:28,226 already explicitly excluding 'starfish.spacetx_format.examples.fov_manifest' via 2024-10-07T04:01:28,227 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-10-07T04:01:28,227 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-10-07T04:01:28,228 combination with a more fine grained `package-data` configuration. 2024-10-07T04:01:28,229 You can read more about "package data files" on setuptools documentation page: 2024-10-07T04:01:28,230 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-10-07T04:01:28,231 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-10-07T04:01:28,232 even if it does not contain any `.py` files. 2024-10-07T04:01:28,232 On the other hand, currently there is no concept of package data 2024-10-07T04:01:28,233 directory, all directories are treated like packages. 2024-10-07T04:01:28,234 ******************************************************************************** 2024-10-07T04:01:28,234 !! 2024-10-07T04:01:28,235 check.warn(importable) 2024-10-07T04:01:28,235 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'starfish.spacetx_format.schema' is absent from the `packages` configuration. 2024-10-07T04:01:28,236 !! 2024-10-07T04:01:28,237 ******************************************************************************** 2024-10-07T04:01:28,237 ############################ 2024-10-07T04:01:28,238 # Package would be ignored # 2024-10-07T04:01:28,238 ############################ 2024-10-07T04:01:28,239 Python recognizes 'starfish.spacetx_format.schema' as an importable package[^1], 2024-10-07T04:01:28,239 but it is absent from setuptools' `packages` configuration. 2024-10-07T04:01:28,240 This leads to an ambiguous overall configuration. If you want to distribute this 2024-10-07T04:01:28,241 package, please make sure that 'starfish.spacetx_format.schema' is explicitly added 2024-10-07T04:01:28,241 to the `packages` configuration field. 2024-10-07T04:01:28,242 Alternatively, you can also rely on setuptools' discovery methods 2024-10-07T04:01:28,243 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-10-07T04:01:28,243 instead of `find_packages(...)`/`find:`). 2024-10-07T04:01:28,244 You can read more about "package discovery" on setuptools documentation page: 2024-10-07T04:01:28,245 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-10-07T04:01:28,246 If you don't want 'starfish.spacetx_format.schema' to be distributed and are 2024-10-07T04:01:28,247 already explicitly excluding 'starfish.spacetx_format.schema' via 2024-10-07T04:01:28,247 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-10-07T04:01:28,247 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-10-07T04:01:28,248 combination with a more fine grained `package-data` configuration. 2024-10-07T04:01:28,249 You can read more about "package data files" on setuptools documentation page: 2024-10-07T04:01:28,250 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-10-07T04:01:28,251 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-10-07T04:01:28,252 even if it does not contain any `.py` files. 2024-10-07T04:01:28,252 On the other hand, currently there is no concept of package data 2024-10-07T04:01:28,253 directory, all directories are treated like packages. 2024-10-07T04:01:28,253 ******************************************************************************** 2024-10-07T04:01:28,254 !! 2024-10-07T04:01:28,254 check.warn(importable) 2024-10-07T04:01:28,255 copying starfish/REQUIREMENTS-STRICT.txt -> build/lib/starfish 2024-10-07T04:01:28,255 creating build/lib/starfish/spacetx_format/examples/codebook 2024-10-07T04:01:28,255 copying starfish/spacetx_format/examples/codebook/codebook.json -> build/lib/starfish/spacetx_format/examples/codebook 2024-10-07T04:01:28,256 copying starfish/spacetx_format/examples/codebook/codebook_diagonal.json -> build/lib/starfish/spacetx_format/examples/codebook 2024-10-07T04:01:28,257 copying starfish/spacetx_format/examples/codebook/codebook_diagonal_inferred_value.json -> build/lib/starfish/spacetx_format/examples/codebook 2024-10-07T04:01:28,257 creating build/lib/starfish/spacetx_format/examples/experiment 2024-10-07T04:01:28,258 copying starfish/spacetx_format/examples/experiment/dartfish_experiment.json -> build/lib/starfish/spacetx_format/examples/experiment 2024-10-07T04:01:28,258 copying starfish/spacetx_format/examples/experiment/experiment.json -> build/lib/starfish/spacetx_format/examples/experiment 2024-10-07T04:01:28,258 copying starfish/spacetx_format/examples/experiment/no_fov_manifest.json -> build/lib/starfish/spacetx_format/examples/experiment 2024-10-07T04:01:28,259 creating build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,259 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_scalar.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,260 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_single.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,260 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_scalar.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,261 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_single.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,261 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_single.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,262 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_triple.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,262 copying starfish/spacetx_format/examples/field_of_view/coordinates_good_max.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,263 copying starfish/spacetx_format/examples/field_of_view/coordinates_good_min.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,264 copying starfish/spacetx_format/examples/field_of_view/dartfish_field_of_view.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,264 copying starfish/spacetx_format/examples/field_of_view/dartfish_nuclei.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,264 copying starfish/spacetx_format/examples/field_of_view/field_of_view.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,265 copying starfish/spacetx_format/examples/field_of_view/too_large.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:28,265 creating build/lib/starfish/spacetx_format/examples/fov_manifest 2024-10-07T04:01:28,266 copying starfish/spacetx_format/examples/fov_manifest/fov_manifest.json -> build/lib/starfish/spacetx_format/examples/fov_manifest 2024-10-07T04:01:28,266 creating build/lib/starfish/spacetx_format/schema 2024-10-07T04:01:28,266 copying starfish/spacetx_format/schema/experiment_4.0.0.json -> build/lib/starfish/spacetx_format/schema 2024-10-07T04:01:28,267 copying starfish/spacetx_format/schema/experiment_5.0.0.json -> build/lib/starfish/spacetx_format/schema 2024-10-07T04:01:28,267 copying starfish/spacetx_format/schema/extras.json -> build/lib/starfish/spacetx_format/schema 2024-10-07T04:01:28,269 copying starfish/spacetx_format/schema/fov_manifest_0.0.0.json -> build/lib/starfish/spacetx_format/schema 2024-10-07T04:01:28,271 copying starfish/spacetx_format/schema/fov_manifest_0.1.0.json -> build/lib/starfish/spacetx_format/schema 2024-10-07T04:01:28,273 copying starfish/spacetx_format/schema/version.json -> build/lib/starfish/spacetx_format/schema 2024-10-07T04:01:28,275 creating build/lib/starfish/spacetx_format/schema/codebook_0.0.0 2024-10-07T04:01:28,276 copying starfish/spacetx_format/schema/codebook_0.0.0/codebook.json -> build/lib/starfish/spacetx_format/schema/codebook_0.0.0 2024-10-07T04:01:28,279 copying starfish/spacetx_format/schema/codebook_0.0.0/codeword.json -> build/lib/starfish/spacetx_format/schema/codebook_0.0.0 2024-10-07T04:01:28,281 creating build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0 2024-10-07T04:01:28,282 copying starfish/spacetx_format/schema/field_of_view_0.0.0/field_of_view.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0 2024-10-07T04:01:28,284 creating build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2024-10-07T04:01:28,285 copying starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/coordinates.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2024-10-07T04:01:28,288 copying starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/indices.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2024-10-07T04:01:28,290 copying starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/tiles.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2024-10-07T04:01:28,292 creating build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0 2024-10-07T04:01:28,293 copying starfish/spacetx_format/schema/field_of_view_0.1.0/field_of_view.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0 2024-10-07T04:01:28,296 creating build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2024-10-07T04:01:28,297 copying starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/coordinates.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2024-10-07T04:01:28,299 copying starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/indices.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2024-10-07T04:01:28,301 copying starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/tiles.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2024-10-07T04:01:28,332 UPDATING build/lib/starfish/core/_version.py 2024-10-07T04:01:28,337 set build/lib/starfish/core/_version.py to '0.3.0' 2024-10-07T04:01:28,365 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-10-07T04:01:28,365 !! 2024-10-07T04:01:28,366 ******************************************************************************** 2024-10-07T04:01:28,366 Please avoid running ``setup.py`` directly. 2024-10-07T04:01:28,367 Instead, use pypa/build, pypa/installer or other 2024-10-07T04:01:28,367 standards-based tools. 2024-10-07T04:01:28,368 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-10-07T04:01:28,369 ******************************************************************************** 2024-10-07T04:01:28,370 !! 2024-10-07T04:01:28,370 self.initialize_options() 2024-10-07T04:01:28,392 installing to build/bdist.linux-armv7l/wheel 2024-10-07T04:01:28,393 running install 2024-10-07T04:01:28,417 running install_lib 2024-10-07T04:01:28,444 creating build/bdist.linux-armv7l/wheel 2024-10-07T04:01:28,446 creating build/bdist.linux-armv7l/wheel/starfish 2024-10-07T04:01:28,448 creating build/bdist.linux-armv7l/wheel/starfish/core 2024-10-07T04:01:28,450 copying build/lib/starfish/core/compat.py -> build/bdist.linux-armv7l/wheel/./starfish/core 2024-10-07T04:01:28,453 copying build/lib/starfish/core/_display.py -> build/bdist.linux-armv7l/wheel/./starfish/core 2024-10-07T04:01:28,455 copying build/lib/starfish/core/_version.py -> build/bdist.linux-armv7l/wheel/./starfish/core 2024-10-07T04:01:28,458 creating build/bdist.linux-armv7l/wheel/starfish/core/segmentation_mask 2024-10-07T04:01:28,459 copying build/lib/starfish/core/segmentation_mask/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/segmentation_mask 2024-10-07T04:01:28,461 copying build/lib/starfish/core/segmentation_mask/segmentation_mask.py -> build/bdist.linux-armv7l/wheel/./starfish/core/segmentation_mask 2024-10-07T04:01:28,463 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment 2024-10-07T04:01:28,465 copying build/lib/starfish/core/experiment/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment 2024-10-07T04:01:28,467 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment/test 2024-10-07T04:01:28,468 copying build/lib/starfish/core/experiment/test/test_version.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/test 2024-10-07T04:01:28,470 copying build/lib/starfish/core/experiment/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/test 2024-10-07T04:01:28,471 copying build/lib/starfish/core/experiment/test/test_experiment.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/test 2024-10-07T04:01:28,474 copying build/lib/starfish/core/experiment/version.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment 2024-10-07T04:01:28,475 copying build/lib/starfish/core/experiment/experiment.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment 2024-10-07T04:01:28,479 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder 2024-10-07T04:01:28,481 copying build/lib/starfish/core/experiment/builder/builder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder 2024-10-07T04:01:28,524 copying build/lib/starfish/core/experiment/builder/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder 2024-10-07T04:01:28,527 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test 2024-10-07T04:01:28,528 copying build/lib/starfish/core/experiment/builder/test/test_orderediterator.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test 2024-10-07T04:01:28,530 copying build/lib/starfish/core/experiment/builder/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test 2024-10-07T04:01:28,532 copying build/lib/starfish/core/experiment/builder/test/test_small_axis.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test 2024-10-07T04:01:28,534 copying build/lib/starfish/core/experiment/builder/test/test_inplace.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test 2024-10-07T04:01:28,538 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:28,539 copying build/lib/starfish/core/experiment/builder/test/structured_formatter/test_multiple_fov.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:28,542 copying build/lib/starfish/core/experiment/builder/test/structured_formatter/test_single_fov.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:28,545 copying build/lib/starfish/core/experiment/builder/test/structured_formatter/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:28,547 copying build/lib/starfish/core/experiment/builder/test/structured_formatter/util.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:28,549 copying build/lib/starfish/core/experiment/builder/test/structured_formatter/test_tilepath.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test/structured_formatter 2024-10-07T04:01:28,552 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/factories 2024-10-07T04:01:28,553 copying build/lib/starfish/core/experiment/builder/test/factories/all_purpose.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test/factories 2024-10-07T04:01:28,556 copying build/lib/starfish/core/experiment/builder/test/factories/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test/factories 2024-10-07T04:01:28,559 copying build/lib/starfish/core/experiment/builder/test/factories/unique_tiles.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder/test/factories 2024-10-07T04:01:28,561 copying build/lib/starfish/core/experiment/builder/providers.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder 2024-10-07T04:01:28,563 copying build/lib/starfish/core/experiment/builder/defaultproviders.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder 2024-10-07T04:01:28,566 copying build/lib/starfish/core/experiment/builder/orderediterator.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder 2024-10-07T04:01:28,568 copying build/lib/starfish/core/experiment/builder/inplace.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder 2024-10-07T04:01:28,570 copying build/lib/starfish/core/experiment/builder/structured_formatter.py -> build/bdist.linux-armv7l/wheel/./starfish/core/experiment/builder 2024-10-07T04:01:28,574 creating build/bdist.linux-armv7l/wheel/starfish/core/types 2024-10-07T04:01:28,575 copying build/lib/starfish/core/types/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/types 2024-10-07T04:01:28,577 copying build/lib/starfish/core/types/_decoded_spots.py -> build/bdist.linux-armv7l/wheel/./starfish/core/types 2024-10-07T04:01:28,580 creating build/bdist.linux-armv7l/wheel/starfish/core/types/test 2024-10-07T04:01:28,582 copying build/lib/starfish/core/types/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/types/test 2024-10-07T04:01:28,584 copying build/lib/starfish/core/types/test/test_decoded_spots.py -> build/bdist.linux-armv7l/wheel/./starfish/core/types/test 2024-10-07T04:01:28,586 copying build/lib/starfish/core/types/test/test_saving_spots.py -> build/bdist.linux-armv7l/wheel/./starfish/core/types/test 2024-10-07T04:01:28,588 copying build/lib/starfish/core/types/_functionsource.py -> build/bdist.linux-armv7l/wheel/./starfish/core/types 2024-10-07T04:01:28,591 copying build/lib/starfish/core/types/_constants.py -> build/bdist.linux-armv7l/wheel/./starfish/core/types 2024-10-07T04:01:28,593 copying build/lib/starfish/core/types/_validated_table.py -> build/bdist.linux-armv7l/wheel/./starfish/core/types 2024-10-07T04:01:28,595 copying build/lib/starfish/core/types/_spot_attributes.py -> build/bdist.linux-armv7l/wheel/./starfish/core/types 2024-10-07T04:01:28,598 copying build/lib/starfish/core/types/_spot_finding_results.py -> build/bdist.linux-armv7l/wheel/./starfish/core/types 2024-10-07T04:01:28,600 copying build/lib/starfish/core/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core 2024-10-07T04:01:28,603 creating build/bdist.linux-armv7l/wheel/starfish/core/expression_matrix 2024-10-07T04:01:28,604 copying build/lib/starfish/core/expression_matrix/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/expression_matrix 2024-10-07T04:01:28,607 creating build/bdist.linux-armv7l/wheel/starfish/core/expression_matrix/test 2024-10-07T04:01:28,608 copying build/lib/starfish/core/expression_matrix/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/expression_matrix/test 2024-10-07T04:01:28,610 copying build/lib/starfish/core/expression_matrix/test/test_concatenate.py -> build/bdist.linux-armv7l/wheel/./starfish/core/expression_matrix/test 2024-10-07T04:01:28,613 copying build/lib/starfish/core/expression_matrix/test/test_serialization.py -> build/bdist.linux-armv7l/wheel/./starfish/core/expression_matrix/test 2024-10-07T04:01:28,615 copying build/lib/starfish/core/expression_matrix/expression_matrix.py -> build/bdist.linux-armv7l/wheel/./starfish/core/expression_matrix 2024-10-07T04:01:28,617 copying build/lib/starfish/core/expression_matrix/concatenate.py -> build/bdist.linux-armv7l/wheel/./starfish/core/expression_matrix 2024-10-07T04:01:28,620 creating build/bdist.linux-armv7l/wheel/starfish/core/test 2024-10-07T04:01:28,621 copying build/lib/starfish/core/test/factories.py -> build/bdist.linux-armv7l/wheel/./starfish/core/test 2024-10-07T04:01:28,624 copying build/lib/starfish/core/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/test 2024-10-07T04:01:28,626 copying build/lib/starfish/core/test/test_display.py -> build/bdist.linux-armv7l/wheel/./starfish/core/test 2024-10-07T04:01:28,629 copying build/lib/starfish/core/test/test_multiprocessing_workflow.py -> build/bdist.linux-armv7l/wheel/./starfish/core/test 2024-10-07T04:01:28,631 copying build/lib/starfish/core/test/test_synthetic_spot_creation.py -> build/bdist.linux-armv7l/wheel/./starfish/core/test 2024-10-07T04:01:28,634 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology 2024-10-07T04:01:28,636 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/label_image 2024-10-07T04:01:28,638 copying build/lib/starfish/core/morphology/label_image/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/label_image 2024-10-07T04:01:28,641 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/label_image/test 2024-10-07T04:01:28,643 copying build/lib/starfish/core/morphology/label_image/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/label_image/test 2024-10-07T04:01:28,645 copying build/lib/starfish/core/morphology/label_image/test/test_label_image.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/label_image/test 2024-10-07T04:01:28,648 copying build/lib/starfish/core/morphology/label_image/label_image.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/label_image 2024-10-07T04:01:28,651 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Segment 2024-10-07T04:01:28,653 copying build/lib/starfish/core/morphology/Segment/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Segment 2024-10-07T04:01:28,655 copying build/lib/starfish/core/morphology/Segment/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Segment 2024-10-07T04:01:28,657 copying build/lib/starfish/core/morphology/Segment/watershed.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Segment 2024-10-07T04:01:28,661 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask 2024-10-07T04:01:28,663 copying build/lib/starfish/core/morphology/binary_mask/binary_mask.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/binary_mask 2024-10-07T04:01:28,666 copying build/lib/starfish/core/morphology/binary_mask/expand.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/binary_mask 2024-10-07T04:01:28,668 copying build/lib/starfish/core/morphology/binary_mask/_io.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/binary_mask 2024-10-07T04:01:28,671 copying build/lib/starfish/core/morphology/binary_mask/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/binary_mask 2024-10-07T04:01:28,673 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask/test 2024-10-07T04:01:28,675 copying build/lib/starfish/core/morphology/binary_mask/test/test_binary_mask.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/binary_mask/test 2024-10-07T04:01:28,678 copying build/lib/starfish/core/morphology/binary_mask/test/test_from_binary_arrays_and_ticks.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/binary_mask/test 2024-10-07T04:01:28,680 copying build/lib/starfish/core/morphology/binary_mask/test/factories.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/binary_mask/test 2024-10-07T04:01:28,682 copying build/lib/starfish/core/morphology/binary_mask/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/binary_mask/test 2024-10-07T04:01:28,684 copying build/lib/starfish/core/morphology/binary_mask/test/test_from_label_array_and_ticks.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/binary_mask/test 2024-10-07T04:01:28,687 copying build/lib/starfish/core/morphology/binary_mask/test/test_expand.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/binary_mask/test 2024-10-07T04:01:28,689 copying build/lib/starfish/core/morphology/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology 2024-10-07T04:01:28,692 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Merge 2024-10-07T04:01:28,693 copying build/lib/starfish/core/morphology/Merge/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Merge 2024-10-07T04:01:28,695 copying build/lib/starfish/core/morphology/Merge/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Merge 2024-10-07T04:01:28,698 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Merge/test 2024-10-07T04:01:28,700 copying build/lib/starfish/core/morphology/Merge/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Merge/test 2024-10-07T04:01:28,702 copying build/lib/starfish/core/morphology/Merge/test/test_simple.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Merge/test 2024-10-07T04:01:28,704 copying build/lib/starfish/core/morphology/Merge/simple.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Merge 2024-10-07T04:01:28,707 copying build/lib/starfish/core/morphology/util.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology 2024-10-07T04:01:28,709 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Binarize 2024-10-07T04:01:28,711 copying build/lib/starfish/core/morphology/Binarize/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Binarize 2024-10-07T04:01:28,713 copying build/lib/starfish/core/morphology/Binarize/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Binarize 2024-10-07T04:01:28,716 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Binarize/test 2024-10-07T04:01:28,717 copying build/lib/starfish/core/morphology/Binarize/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Binarize/test 2024-10-07T04:01:28,719 copying build/lib/starfish/core/morphology/Binarize/test/test_threshold.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Binarize/test 2024-10-07T04:01:28,722 copying build/lib/starfish/core/morphology/Binarize/threshold.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Binarize 2024-10-07T04:01:28,724 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter 2024-10-07T04:01:28,726 copying build/lib/starfish/core/morphology/Filter/reduce.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter 2024-10-07T04:01:28,728 copying build/lib/starfish/core/morphology/Filter/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter 2024-10-07T04:01:28,730 copying build/lib/starfish/core/morphology/Filter/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter 2024-10-07T04:01:28,733 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter/test 2024-10-07T04:01:28,735 copying build/lib/starfish/core/morphology/Filter/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter/test 2024-10-07T04:01:28,737 copying build/lib/starfish/core/morphology/Filter/test/test_reduce.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter/test 2024-10-07T04:01:28,739 copying build/lib/starfish/core/morphology/Filter/test/test_areafilter.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter/test 2024-10-07T04:01:28,741 copying build/lib/starfish/core/morphology/Filter/test/test_map.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter/test 2024-10-07T04:01:28,743 copying build/lib/starfish/core/morphology/Filter/map.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter 2024-10-07T04:01:28,746 copying build/lib/starfish/core/morphology/Filter/min_distance_label.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter 2024-10-07T04:01:28,748 copying build/lib/starfish/core/morphology/Filter/areafilter.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter 2024-10-07T04:01:28,750 copying build/lib/starfish/core/morphology/Filter/structural_label.py -> build/bdist.linux-armv7l/wheel/./starfish/core/morphology/Filter 2024-10-07T04:01:28,753 creating build/bdist.linux-armv7l/wheel/starfish/core/pipeline 2024-10-07T04:01:28,754 copying build/lib/starfish/core/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/pipeline 2024-10-07T04:01:28,756 copying build/lib/starfish/core/pipeline/algorithmbase.py -> build/bdist.linux-armv7l/wheel/./starfish/core/pipeline 2024-10-07T04:01:28,759 creating build/bdist.linux-armv7l/wheel/starfish/core/config 2024-10-07T04:01:28,760 copying build/lib/starfish/core/config/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/config 2024-10-07T04:01:28,764 creating build/bdist.linux-armv7l/wheel/starfish/core/config/test 2024-10-07T04:01:28,765 copying build/lib/starfish/core/config/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/config/test 2024-10-07T04:01:28,767 copying build/lib/starfish/core/config/test/test_config.py -> build/bdist.linux-armv7l/wheel/./starfish/core/config/test 2024-10-07T04:01:28,770 copying build/lib/starfish/core/starfish.py -> build/bdist.linux-armv7l/wheel/./starfish/core 2024-10-07T04:01:28,773 creating build/bdist.linux-armv7l/wheel/starfish/core/util 2024-10-07T04:01:28,774 copying build/lib/starfish/core/util/exec.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util 2024-10-07T04:01:28,777 copying build/lib/starfish/core/util/levels.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util 2024-10-07T04:01:28,780 copying build/lib/starfish/core/util/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util 2024-10-07T04:01:28,782 copying build/lib/starfish/core/util/logging.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util 2024-10-07T04:01:28,784 creating build/bdist.linux-armv7l/wheel/starfish/core/util/test 2024-10-07T04:01:28,786 copying build/lib/starfish/core/util/test/test_preserve_float_range.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util/test 2024-10-07T04:01:28,789 copying build/lib/starfish/core/util/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util/test 2024-10-07T04:01:28,791 copying build/lib/starfish/core/util/test/test_levels.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util/test 2024-10-07T04:01:28,793 copying build/lib/starfish/core/util/argparse.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util 2024-10-07T04:01:28,795 copying build/lib/starfish/core/util/enum.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util 2024-10-07T04:01:28,797 copying build/lib/starfish/core/util/try_import.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util 2024-10-07T04:01:28,798 copying build/lib/starfish/core/util/clock.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util 2024-10-07T04:01:28,801 creating build/bdist.linux-armv7l/wheel/starfish/core/util/click 2024-10-07T04:01:28,802 copying build/lib/starfish/core/util/click/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util/click 2024-10-07T04:01:28,804 copying build/lib/starfish/core/util/config.py -> build/bdist.linux-armv7l/wheel/./starfish/core/util 2024-10-07T04:01:28,806 creating build/bdist.linux-armv7l/wheel/starfish/core/image 2024-10-07T04:01:28,809 creating build/bdist.linux-armv7l/wheel/starfish/core/image/Segment 2024-10-07T04:01:28,810 copying build/lib/starfish/core/image/Segment/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Segment 2024-10-07T04:01:28,812 copying build/lib/starfish/core/image/Segment/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Segment 2024-10-07T04:01:28,813 copying build/lib/starfish/core/image/Segment/watershed.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Segment 2024-10-07T04:01:28,816 copying build/lib/starfish/core/image/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image 2024-10-07T04:01:28,818 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration 2024-10-07T04:01:28,819 copying build/lib/starfish/core/image/_registration/transforms_list.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration 2024-10-07T04:01:28,822 copying build/lib/starfish/core/image/_registration/_format.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration 2024-10-07T04:01:28,824 copying build/lib/starfish/core/image/_registration/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration 2024-10-07T04:01:28,826 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/test 2024-10-07T04:01:28,827 copying build/lib/starfish/core/image/_registration/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/test 2024-10-07T04:01:28,829 copying build/lib/starfish/core/image/_registration/test/test_transforms_list.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/test 2024-10-07T04:01:28,832 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/ApplyTransform 2024-10-07T04:01:28,833 copying build/lib/starfish/core/image/_registration/ApplyTransform/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/ApplyTransform 2024-10-07T04:01:28,835 copying build/lib/starfish/core/image/_registration/ApplyTransform/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/ApplyTransform 2024-10-07T04:01:28,838 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/ApplyTransform/test 2024-10-07T04:01:28,839 copying build/lib/starfish/core/image/_registration/ApplyTransform/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/ApplyTransform/test 2024-10-07T04:01:28,841 copying build/lib/starfish/core/image/_registration/ApplyTransform/test/test_warp.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/ApplyTransform/test 2024-10-07T04:01:28,843 copying build/lib/starfish/core/image/_registration/ApplyTransform/warp.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/ApplyTransform 2024-10-07T04:01:28,846 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/LearnTransform 2024-10-07T04:01:28,847 copying build/lib/starfish/core/image/_registration/LearnTransform/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/LearnTransform 2024-10-07T04:01:28,849 copying build/lib/starfish/core/image/_registration/LearnTransform/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/LearnTransform 2024-10-07T04:01:28,851 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/LearnTransform/test 2024-10-07T04:01:28,852 copying build/lib/starfish/core/image/_registration/LearnTransform/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/LearnTransform/test 2024-10-07T04:01:28,854 copying build/lib/starfish/core/image/_registration/LearnTransform/test/test_translation.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/LearnTransform/test 2024-10-07T04:01:28,856 copying build/lib/starfish/core/image/_registration/LearnTransform/translation.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/_registration/LearnTransform 2024-10-07T04:01:28,859 creating build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2024-10-07T04:01:28,860 copying build/lib/starfish/core/image/Filter/clip_percentile_to_zero.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,862 copying build/lib/starfish/core/image/Filter/reduce.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,865 copying build/lib/starfish/core/image/Filter/ilastik_pre_trained_probability.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,867 copying build/lib/starfish/core/image/Filter/laplace.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,871 copying build/lib/starfish/core/image/Filter/bandpass.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,874 copying build/lib/starfish/core/image/Filter/clip_value_to_zero.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,877 copying build/lib/starfish/core/image/Filter/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,880 copying build/lib/starfish/core/image/Filter/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,883 copying build/lib/starfish/core/image/Filter/clip.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,886 copying build/lib/starfish/core/image/Filter/element_wise_mult.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,890 creating build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2024-10-07T04:01:28,892 copying build/lib/starfish/core/image/Filter/test/test_call_bases.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter/test 2024-10-07T04:01:28,895 copying build/lib/starfish/core/image/Filter/test/test_filter.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter/test 2024-10-07T04:01:28,898 copying build/lib/starfish/core/image/Filter/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter/test 2024-10-07T04:01:28,901 copying build/lib/starfish/core/image/Filter/test/test_reduce.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter/test 2024-10-07T04:01:28,904 copying build/lib/starfish/core/image/Filter/test/test_linear_unmixing.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter/test 2024-10-07T04:01:28,907 copying build/lib/starfish/core/image/Filter/test/test_white_tophat.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter/test 2024-10-07T04:01:28,910 copying build/lib/starfish/core/image/Filter/test/test_zero_by_channel_magnitude.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter/test 2024-10-07T04:01:28,913 copying build/lib/starfish/core/image/Filter/test/test_map.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter/test 2024-10-07T04:01:28,916 copying build/lib/starfish/core/image/Filter/test/test_api_contract.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter/test 2024-10-07T04:01:28,919 copying build/lib/starfish/core/image/Filter/test/test_histogram_matching.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter/test 2024-10-07T04:01:28,922 copying build/lib/starfish/core/image/Filter/match_histograms.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,925 copying build/lib/starfish/core/image/Filter/linear_unmixing.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,928 copying build/lib/starfish/core/image/Filter/white_tophat.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,931 copying build/lib/starfish/core/image/Filter/util.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,935 copying build/lib/starfish/core/image/Filter/gaussian_high_pass.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,938 copying build/lib/starfish/core/image/Filter/zero_by_channel_magnitude.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,941 copying build/lib/starfish/core/image/Filter/map.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,944 copying build/lib/starfish/core/image/Filter/call_bases.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,946 copying build/lib/starfish/core/image/Filter/mean_high_pass.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,949 copying build/lib/starfish/core/image/Filter/richardson_lucy_deconvolution.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,952 copying build/lib/starfish/core/image/Filter/gaussian_low_pass.py -> build/bdist.linux-armv7l/wheel/./starfish/core/image/Filter 2024-10-07T04:01:28,955 copying build/lib/starfish/core/errors.py -> build/bdist.linux-armv7l/wheel/./starfish/core 2024-10-07T04:01:28,958 creating build/bdist.linux-armv7l/wheel/starfish/core/intensity_table 2024-10-07T04:01:28,960 copying build/lib/starfish/core/intensity_table/overlap.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table 2024-10-07T04:01:28,963 copying build/lib/starfish/core/intensity_table/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table 2024-10-07T04:01:28,966 creating build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2024-10-07T04:01:28,967 copying build/lib/starfish/core/intensity_table/test/factories.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,969 copying build/lib/starfish/core/intensity_table/test/test_intensity_table_serialization.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,971 copying build/lib/starfish/core/intensity_table/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,972 copying build/lib/starfish/core/intensity_table/test/test_concatenate.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,974 copying build/lib/starfish/core/intensity_table/test/test_to_mermaid.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,976 copying build/lib/starfish/core/intensity_table/test/test_from_spot_data.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,978 copying build/lib/starfish/core/intensity_table/test/test_stack_intensity_table_reshaping.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,980 copying build/lib/starfish/core/intensity_table/test/test_overlap.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,982 copying build/lib/starfish/core/intensity_table/test/test_intensity_table_coords.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,985 copying build/lib/starfish/core/intensity_table/test/test_synthetic_intensities.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,986 copying build/lib/starfish/core/intensity_table/test/test_from_imagestack.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,988 copying build/lib/starfish/core/intensity_table/test/test_empty_intensity_table.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table/test 2024-10-07T04:01:28,990 copying build/lib/starfish/core/intensity_table/intensity_table_coordinates.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table 2024-10-07T04:01:28,992 copying build/lib/starfish/core/intensity_table/intensity_table.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table 2024-10-07T04:01:28,994 copying build/lib/starfish/core/intensity_table/concatenate.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table 2024-10-07T04:01:28,996 copying build/lib/starfish/core/intensity_table/decoded_intensity_table.py -> build/bdist.linux-armv7l/wheel/./starfish/core/intensity_table 2024-10-07T04:01:28,999 creating build/bdist.linux-armv7l/wheel/starfish/core/spots 2024-10-07T04:01:29,000 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/AssignTargets 2024-10-07T04:01:29,002 copying build/lib/starfish/core/spots/AssignTargets/label.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/AssignTargets 2024-10-07T04:01:29,004 copying build/lib/starfish/core/spots/AssignTargets/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/AssignTargets 2024-10-07T04:01:29,006 copying build/lib/starfish/core/spots/AssignTargets/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/AssignTargets 2024-10-07T04:01:29,007 copying build/lib/starfish/core/spots/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots 2024-10-07T04:01:29,010 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels 2024-10-07T04:01:29,011 copying build/lib/starfish/core/spots/DetectPixels/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DetectPixels 2024-10-07T04:01:29,013 copying build/lib/starfish/core/spots/DetectPixels/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DetectPixels 2024-10-07T04:01:29,015 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels/test 2024-10-07T04:01:29,016 copying build/lib/starfish/core/spots/DetectPixels/test/test_targets_map.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DetectPixels/test 2024-10-07T04:01:29,018 copying build/lib/starfish/core/spots/DetectPixels/test/test_calculate_mean_pixel_traces.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DetectPixels/test 2024-10-07T04:01:29,021 copying build/lib/starfish/core/spots/DetectPixels/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DetectPixels/test 2024-10-07T04:01:29,022 copying build/lib/starfish/core/spots/DetectPixels/test/test_intensities_to_decoded_image.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DetectPixels/test 2024-10-07T04:01:29,024 copying build/lib/starfish/core/spots/DetectPixels/test/test_create_spot_attributes.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DetectPixels/test 2024-10-07T04:01:29,026 copying build/lib/starfish/core/spots/DetectPixels/pixel_spot_decoder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DetectPixels 2024-10-07T04:01:29,028 copying build/lib/starfish/core/spots/DetectPixels/combine_adjacent_features.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DetectPixels 2024-10-07T04:01:29,031 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots 2024-10-07T04:01:29,032 copying build/lib/starfish/core/spots/DecodeSpots/check_all_decoder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots 2024-10-07T04:01:29,035 copying build/lib/starfish/core/spots/DecodeSpots/simple_lookup_decoder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots 2024-10-07T04:01:29,037 copying build/lib/starfish/core/spots/DecodeSpots/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots 2024-10-07T04:01:29,039 copying build/lib/starfish/core/spots/DecodeSpots/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots 2024-10-07T04:01:29,041 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:29,042 copying build/lib/starfish/core/spots/DecodeSpots/test/test_nearest_neighbor_trace_builder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:29,045 copying build/lib/starfish/core/spots/DecodeSpots/test/test_trace_builders.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:29,047 copying build/lib/starfish/core/spots/DecodeSpots/test/test_metric_decoder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:29,049 copying build/lib/starfish/core/spots/DecodeSpots/test/test_composite_codebook.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:29,051 copying build/lib/starfish/core/spots/DecodeSpots/test/test_decoding_without_spots.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:29,053 copying build/lib/starfish/core/spots/DecodeSpots/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:29,055 copying build/lib/starfish/core/spots/DecodeSpots/test/test_check_all.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:29,057 copying build/lib/starfish/core/spots/DecodeSpots/test/test_spot_finders.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots/test 2024-10-07T04:01:29,059 copying build/lib/starfish/core/spots/DecodeSpots/per_round_max_channel_decoder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots 2024-10-07T04:01:29,061 copying build/lib/starfish/core/spots/DecodeSpots/util.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots 2024-10-07T04:01:29,063 copying build/lib/starfish/core/spots/DecodeSpots/trace_builders.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots 2024-10-07T04:01:29,065 copying build/lib/starfish/core/spots/DecodeSpots/check_all_funcs.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots 2024-10-07T04:01:29,068 copying build/lib/starfish/core/spots/DecodeSpots/metric_decoder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/DecodeSpots 2024-10-07T04:01:29,071 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots 2024-10-07T04:01:29,072 copying build/lib/starfish/core/spots/FindSpots/_base.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/FindSpots 2024-10-07T04:01:29,074 copying build/lib/starfish/core/spots/FindSpots/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/FindSpots 2024-10-07T04:01:29,076 copying build/lib/starfish/core/spots/FindSpots/blob.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/FindSpots 2024-10-07T04:01:29,079 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots/test 2024-10-07T04:01:29,080 copying build/lib/starfish/core/spots/FindSpots/test/test_spot_detection.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/FindSpots/test 2024-10-07T04:01:29,083 copying build/lib/starfish/core/spots/FindSpots/test/test_synthetic_data.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/FindSpots/test 2024-10-07T04:01:29,085 copying build/lib/starfish/core/spots/FindSpots/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/FindSpots/test 2024-10-07T04:01:29,087 copying build/lib/starfish/core/spots/FindSpots/test/test_local_max_peak_finder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/FindSpots/test 2024-10-07T04:01:29,088 copying build/lib/starfish/core/spots/FindSpots/local_max_peak_finder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/FindSpots 2024-10-07T04:01:29,091 copying build/lib/starfish/core/spots/FindSpots/spot_finding_utils.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/FindSpots 2024-10-07T04:01:29,093 copying build/lib/starfish/core/spots/FindSpots/trackpy_local_max_peak_finder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spots/FindSpots 2024-10-07T04:01:29,096 creating build/bdist.linux-armv7l/wheel/starfish/core/codebook 2024-10-07T04:01:29,097 copying build/lib/starfish/core/codebook/codebook.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook 2024-10-07T04:01:29,100 copying build/lib/starfish/core/codebook/_format.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook 2024-10-07T04:01:29,102 copying build/lib/starfish/core/codebook/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook 2024-10-07T04:01:29,104 creating build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2024-10-07T04:01:29,105 copying build/lib/starfish/core/codebook/test/test_synthetic_one_hot_codebook.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook/test 2024-10-07T04:01:29,107 copying build/lib/starfish/core/codebook/test/test_from_code_array.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook/test 2024-10-07T04:01:29,109 copying build/lib/starfish/core/codebook/test/test_to_json.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook/test 2024-10-07T04:01:29,111 copying build/lib/starfish/core/codebook/test/factories.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook/test 2024-10-07T04:01:29,113 copying build/lib/starfish/core/codebook/test/test_per_round_max_decode.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook/test 2024-10-07T04:01:29,116 copying build/lib/starfish/core/codebook/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook/test 2024-10-07T04:01:29,117 copying build/lib/starfish/core/codebook/test/test_approximate_nearest_code.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook/test 2024-10-07T04:01:29,119 copying build/lib/starfish/core/codebook/test/test_metric_decode.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook/test 2024-10-07T04:01:29,121 copying build/lib/starfish/core/codebook/test/test_normalize_code_traces.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook/test 2024-10-07T04:01:29,123 copying build/lib/starfish/core/codebook/test/test_code_length.py -> build/bdist.linux-armv7l/wheel/./starfish/core/codebook/test 2024-10-07T04:01:29,126 creating build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2024-10-07T04:01:29,127 copying build/lib/starfish/core/spacetx_format/cli.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spacetx_format 2024-10-07T04:01:29,129 copying build/lib/starfish/core/spacetx_format/test_field_of_view.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spacetx_format 2024-10-07T04:01:29,131 copying build/lib/starfish/core/spacetx_format/validate_sptx.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spacetx_format 2024-10-07T04:01:29,133 copying build/lib/starfish/core/spacetx_format/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spacetx_format 2024-10-07T04:01:29,134 copying build/lib/starfish/core/spacetx_format/test_codebook.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spacetx_format 2024-10-07T04:01:29,136 copying build/lib/starfish/core/spacetx_format/util.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spacetx_format 2024-10-07T04:01:29,139 copying build/lib/starfish/core/spacetx_format/test_fuzz.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spacetx_format 2024-10-07T04:01:29,141 copying build/lib/starfish/core/spacetx_format/test_experiment.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spacetx_format 2024-10-07T04:01:29,142 copying build/lib/starfish/core/spacetx_format/test_fov_manifest.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spacetx_format 2024-10-07T04:01:29,144 copying build/lib/starfish/core/spacetx_format/test_coordinates.py -> build/bdist.linux-armv7l/wheel/./starfish/core/spacetx_format 2024-10-07T04:01:29,146 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack 2024-10-07T04:01:29,147 copying build/lib/starfish/core/imagestack/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack 2024-10-07T04:01:29,150 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2024-10-07T04:01:29,151 copying build/lib/starfish/core/imagestack/test/test_slice_ops.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,154 copying build/lib/starfish/core/imagestack/test/test_from_numpy_array.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,155 copying build/lib/starfish/core/imagestack/test/test_metadata.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,157 copying build/lib/starfish/core/imagestack/test/test_export.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,159 copying build/lib/starfish/core/imagestack/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,161 copying build/lib/starfish/core/imagestack/test/test_physical_coordinate_calculator.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,163 copying build/lib/starfish/core/imagestack/test/test_cropped_load.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,165 copying build/lib/starfish/core/imagestack/test/test_slicedimage_dtype.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,167 copying build/lib/starfish/core/imagestack/test/test_apply.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,169 copying build/lib/starfish/core/imagestack/test/test_index.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,172 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test/factories 2024-10-07T04:01:29,173 copying build/lib/starfish/core/imagestack/test/factories/all_purpose.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test/factories 2024-10-07T04:01:29,175 copying build/lib/starfish/core/imagestack/test/factories/synthetic_stack.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test/factories 2024-10-07T04:01:29,177 copying build/lib/starfish/core/imagestack/test/factories/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test/factories 2024-10-07T04:01:29,179 copying build/lib/starfish/core/imagestack/test/factories/with_coords.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test/factories 2024-10-07T04:01:29,181 copying build/lib/starfish/core/imagestack/test/factories/unique_tiles.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test/factories 2024-10-07T04:01:29,183 copying build/lib/starfish/core/imagestack/test/factories/from_codebook.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test/factories 2024-10-07T04:01:29,185 copying build/lib/starfish/core/imagestack/test/test_labeled_indices.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,187 copying build/lib/starfish/core/imagestack/test/test_from_tilefetcher.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,189 copying build/lib/starfish/core/imagestack/test/imagestack_test_utils.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,192 copying build/lib/starfish/core/imagestack/test/test_coordinates.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,194 copying build/lib/starfish/core/imagestack/test/test_max_proj.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/test 2024-10-07T04:01:29,196 copying build/lib/starfish/core/imagestack/dataorder.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack 2024-10-07T04:01:29,198 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser 2024-10-07T04:01:29,200 copying build/lib/starfish/core/imagestack/parser/crop.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/parser 2024-10-07T04:01:29,202 copying build/lib/starfish/core/imagestack/parser/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/parser 2024-10-07T04:01:29,205 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser/tilefetcher 2024-10-07T04:01:29,207 copying build/lib/starfish/core/imagestack/parser/tilefetcher/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/parser/tilefetcher 2024-10-07T04:01:29,209 copying build/lib/starfish/core/imagestack/parser/tilefetcher/_parser.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/parser/tilefetcher 2024-10-07T04:01:29,212 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser/tileset 2024-10-07T04:01:29,214 copying build/lib/starfish/core/imagestack/parser/tileset/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/parser/tileset 2024-10-07T04:01:29,216 copying build/lib/starfish/core/imagestack/parser/tileset/_parser.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/parser/tileset 2024-10-07T04:01:29,219 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser/numpy 2024-10-07T04:01:29,220 copying build/lib/starfish/core/imagestack/parser/numpy/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/parser/numpy 2024-10-07T04:01:29,223 copying build/lib/starfish/core/imagestack/parser/_key.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/parser 2024-10-07T04:01:29,225 copying build/lib/starfish/core/imagestack/parser/_tiledata.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack/parser 2024-10-07T04:01:29,228 copying build/lib/starfish/core/imagestack/indexing_utils.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack 2024-10-07T04:01:29,230 copying build/lib/starfish/core/imagestack/physical_coordinates.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack 2024-10-07T04:01:29,233 copying build/lib/starfish/core/imagestack/imagestack.py -> build/bdist.linux-armv7l/wheel/./starfish/core/imagestack 2024-10-07T04:01:29,236 copying build/lib/starfish/types.py -> build/bdist.linux-armv7l/wheel/./starfish 2024-10-07T04:01:29,239 creating build/bdist.linux-armv7l/wheel/starfish/experiment 2024-10-07T04:01:29,240 copying build/lib/starfish/experiment/builder.py -> build/bdist.linux-armv7l/wheel/./starfish/experiment 2024-10-07T04:01:29,243 copying build/lib/starfish/experiment/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/experiment 2024-10-07T04:01:29,245 copying build/lib/starfish/REQUIREMENTS-STRICT.txt -> build/bdist.linux-armv7l/wheel/./starfish 2024-10-07T04:01:29,247 copying build/lib/starfish/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish 2024-10-07T04:01:29,250 creating build/bdist.linux-armv7l/wheel/starfish/test 2024-10-07T04:01:29,252 copying build/lib/starfish/test/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/test 2024-10-07T04:01:29,254 creating build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines 2024-10-07T04:01:29,256 copying build/lib/starfish/test/full_pipelines/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/test/full_pipelines 2024-10-07T04:01:29,258 creating build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines/api 2024-10-07T04:01:29,260 copying build/lib/starfish/test/full_pipelines/api/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/test/full_pipelines/api 2024-10-07T04:01:29,262 copying build/lib/starfish/test/full_pipelines/api/test_dartfish.py -> build/bdist.linux-armv7l/wheel/./starfish/test/full_pipelines/api 2024-10-07T04:01:29,265 copying build/lib/starfish/test/full_pipelines/api/test_iss_doc_pipeline.py -> build/bdist.linux-armv7l/wheel/./starfish/test/full_pipelines/api 2024-10-07T04:01:29,267 copying build/lib/starfish/test/full_pipelines/api/test_allen_smFISH.py -> build/bdist.linux-armv7l/wheel/./starfish/test/full_pipelines/api 2024-10-07T04:01:29,269 copying build/lib/starfish/test/full_pipelines/api/test_merfish.py -> build/bdist.linux-armv7l/wheel/./starfish/test/full_pipelines/api 2024-10-07T04:01:29,272 copying build/lib/starfish/test/full_pipelines/api/test_iss_api.py -> build/bdist.linux-armv7l/wheel/./starfish/test/full_pipelines/api 2024-10-07T04:01:29,274 copying build/lib/starfish/spots.py -> build/bdist.linux-armv7l/wheel/./starfish 2024-10-07T04:01:29,277 copying build/lib/starfish/data.py -> build/bdist.linux-armv7l/wheel/./starfish 2024-10-07T04:01:29,280 creating build/bdist.linux-armv7l/wheel/starfish/util 2024-10-07T04:01:29,281 copying build/lib/starfish/util/__init__.py -> build/bdist.linux-armv7l/wheel/./starfish/util 2024-10-07T04:01:29,283 copying build/lib/starfish/util/plot.py -> build/bdist.linux-armv7l/wheel/./starfish/util 2024-10-07T04:01:29,286 copying build/lib/starfish/morphology.py -> build/bdist.linux-armv7l/wheel/./starfish 2024-10-07T04:01:29,288 copying build/lib/starfish/__main__.py -> build/bdist.linux-armv7l/wheel/./starfish 2024-10-07T04:01:29,290 copying build/lib/starfish/config.py -> build/bdist.linux-armv7l/wheel/./starfish 2024-10-07T04:01:29,292 copying build/lib/starfish/image.py -> build/bdist.linux-armv7l/wheel/./starfish 2024-10-07T04:01:29,294 copying build/lib/starfish/test.py -> build/bdist.linux-armv7l/wheel/./starfish 2024-10-07T04:01:29,296 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format 2024-10-07T04:01:29,298 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema 2024-10-07T04:01:29,300 copying build/lib/starfish/spacetx_format/schema/version.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema 2024-10-07T04:01:29,302 copying build/lib/starfish/spacetx_format/schema/experiment_5.0.0.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema 2024-10-07T04:01:29,304 copying build/lib/starfish/spacetx_format/schema/extras.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema 2024-10-07T04:01:29,305 copying build/lib/starfish/spacetx_format/schema/fov_manifest_0.0.0.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema 2024-10-07T04:01:29,307 copying build/lib/starfish/spacetx_format/schema/fov_manifest_0.1.0.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema 2024-10-07T04:01:29,310 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/codebook_0.0.0 2024-10-07T04:01:29,311 copying build/lib/starfish/spacetx_format/schema/codebook_0.0.0/codeword.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema/codebook_0.0.0 2024-10-07T04:01:29,313 copying build/lib/starfish/spacetx_format/schema/codebook_0.0.0/codebook.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema/codebook_0.0.0 2024-10-07T04:01:29,315 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.1.0 2024-10-07T04:01:29,317 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2024-10-07T04:01:29,318 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/indices.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2024-10-07T04:01:29,321 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/tiles.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2024-10-07T04:01:29,322 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/coordinates.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2024-10-07T04:01:29,324 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/field_of_view.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema/field_of_view_0.1.0 2024-10-07T04:01:29,326 copying build/lib/starfish/spacetx_format/schema/experiment_4.0.0.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema 2024-10-07T04:01:29,328 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.0.0 2024-10-07T04:01:29,330 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2024-10-07T04:01:29,331 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/indices.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2024-10-07T04:01:29,333 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/tiles.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2024-10-07T04:01:29,335 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/coordinates.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2024-10-07T04:01:29,337 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/field_of_view.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/schema/field_of_view_0.0.0 2024-10-07T04:01:29,340 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples 2024-10-07T04:01:29,342 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/experiment 2024-10-07T04:01:29,343 copying build/lib/starfish/spacetx_format/examples/experiment/dartfish_experiment.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/experiment 2024-10-07T04:01:29,345 copying build/lib/starfish/spacetx_format/examples/experiment/experiment.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/experiment 2024-10-07T04:01:29,347 copying build/lib/starfish/spacetx_format/examples/experiment/no_fov_manifest.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/experiment 2024-10-07T04:01:29,349 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,350 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_scalar.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,352 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_scalar.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,354 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_good_min.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,356 copying build/lib/starfish/spacetx_format/examples/field_of_view/dartfish_field_of_view.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,358 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_single.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,360 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_triple.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,362 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_good_max.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,363 copying build/lib/starfish/spacetx_format/examples/field_of_view/too_large.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,365 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_single.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,367 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_single.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,369 copying build/lib/starfish/spacetx_format/examples/field_of_view/field_of_view.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,370 copying build/lib/starfish/spacetx_format/examples/field_of_view/dartfish_nuclei.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/field_of_view 2024-10-07T04:01:29,373 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/fov_manifest 2024-10-07T04:01:29,374 copying build/lib/starfish/spacetx_format/examples/fov_manifest/fov_manifest.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/fov_manifest 2024-10-07T04:01:29,376 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/codebook 2024-10-07T04:01:29,377 copying build/lib/starfish/spacetx_format/examples/codebook/codebook_diagonal_inferred_value.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/codebook 2024-10-07T04:01:29,379 copying build/lib/starfish/spacetx_format/examples/codebook/codebook_diagonal.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/codebook 2024-10-07T04:01:29,381 copying build/lib/starfish/spacetx_format/examples/codebook/codebook.json -> build/bdist.linux-armv7l/wheel/./starfish/spacetx_format/examples/codebook 2024-10-07T04:01:29,383 running install_egg_info 2024-10-07T04:01:29,416 Copying starfish.egg-info to build/bdist.linux-armv7l/wheel/./starfish-0.3.0-py3.11.egg-info 2024-10-07T04:01:29,428 running install_scripts 2024-10-07T04:01:29,450 creating build/bdist.linux-armv7l/wheel/starfish-0.3.0.dist-info/WHEEL 2024-10-07T04:01:29,453 creating '/tmp/pip-wheel-e6uhkkp8/starfish-0.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-10-07T04:01:29,455 adding 'starfish/REQUIREMENTS-STRICT.txt' 2024-10-07T04:01:29,456 adding 'starfish/__init__.py' 2024-10-07T04:01:29,458 adding 'starfish/__main__.py' 2024-10-07T04:01:29,459 adding 'starfish/config.py' 2024-10-07T04:01:29,460 adding 'starfish/data.py' 2024-10-07T04:01:29,462 adding 'starfish/image.py' 2024-10-07T04:01:29,463 adding 'starfish/morphology.py' 2024-10-07T04:01:29,464 adding 'starfish/spots.py' 2024-10-07T04:01:29,465 adding 'starfish/test.py' 2024-10-07T04:01:29,466 adding 'starfish/types.py' 2024-10-07T04:01:29,468 adding 'starfish/core/__init__.py' 2024-10-07T04:01:29,470 adding 'starfish/core/_display.py' 2024-10-07T04:01:29,472 adding 'starfish/core/_version.py' 2024-10-07T04:01:29,475 adding 'starfish/core/compat.py' 2024-10-07T04:01:29,476 adding 'starfish/core/errors.py' 2024-10-07T04:01:29,477 adding 'starfish/core/starfish.py' 2024-10-07T04:01:29,479 adding 'starfish/core/codebook/__init__.py' 2024-10-07T04:01:29,480 adding 'starfish/core/codebook/_format.py' 2024-10-07T04:01:29,484 adding 'starfish/core/codebook/codebook.py' 2024-10-07T04:01:29,486 adding 'starfish/core/codebook/test/__init__.py' 2024-10-07T04:01:29,487 adding 'starfish/core/codebook/test/factories.py' 2024-10-07T04:01:29,489 adding 'starfish/core/codebook/test/test_approximate_nearest_code.py' 2024-10-07T04:01:29,490 adding 'starfish/core/codebook/test/test_code_length.py' 2024-10-07T04:01:29,491 adding 'starfish/core/codebook/test/test_from_code_array.py' 2024-10-07T04:01:29,493 adding 'starfish/core/codebook/test/test_metric_decode.py' 2024-10-07T04:01:29,495 adding 'starfish/core/codebook/test/test_normalize_code_traces.py' 2024-10-07T04:01:29,496 adding 'starfish/core/codebook/test/test_per_round_max_decode.py' 2024-10-07T04:01:29,497 adding 'starfish/core/codebook/test/test_synthetic_one_hot_codebook.py' 2024-10-07T04:01:29,499 adding 'starfish/core/codebook/test/test_to_json.py' 2024-10-07T04:01:29,501 adding 'starfish/core/config/__init__.py' 2024-10-07T04:01:29,502 adding 'starfish/core/config/test/__init__.py' 2024-10-07T04:01:29,504 adding 'starfish/core/config/test/test_config.py' 2024-10-07T04:01:29,505 adding 'starfish/core/experiment/__init__.py' 2024-10-07T04:01:29,507 adding 'starfish/core/experiment/experiment.py' 2024-10-07T04:01:29,509 adding 'starfish/core/experiment/version.py' 2024-10-07T04:01:29,510 adding 'starfish/core/experiment/builder/__init__.py' 2024-10-07T04:01:29,513 adding 'starfish/core/experiment/builder/builder.py' 2024-10-07T04:01:29,514 adding 'starfish/core/experiment/builder/defaultproviders.py' 2024-10-07T04:01:29,515 adding 'starfish/core/experiment/builder/inplace.py' 2024-10-07T04:01:29,517 adding 'starfish/core/experiment/builder/orderediterator.py' 2024-10-07T04:01:29,518 adding 'starfish/core/experiment/builder/providers.py' 2024-10-07T04:01:29,520 adding 'starfish/core/experiment/builder/structured_formatter.py' 2024-10-07T04:01:29,522 adding 'starfish/core/experiment/builder/test/__init__.py' 2024-10-07T04:01:29,524 adding 'starfish/core/experiment/builder/test/test_inplace.py' 2024-10-07T04:01:29,525 adding 'starfish/core/experiment/builder/test/test_orderediterator.py' 2024-10-07T04:01:29,526 adding 'starfish/core/experiment/builder/test/test_small_axis.py' 2024-10-07T04:01:29,528 adding 'starfish/core/experiment/builder/test/factories/__init__.py' 2024-10-07T04:01:29,529 adding 'starfish/core/experiment/builder/test/factories/all_purpose.py' 2024-10-07T04:01:29,531 adding 'starfish/core/experiment/builder/test/factories/unique_tiles.py' 2024-10-07T04:01:29,533 adding 'starfish/core/experiment/builder/test/structured_formatter/__init__.py' 2024-10-07T04:01:29,534 adding 'starfish/core/experiment/builder/test/structured_formatter/test_multiple_fov.py' 2024-10-07T04:01:29,536 adding 'starfish/core/experiment/builder/test/structured_formatter/test_single_fov.py' 2024-10-07T04:01:29,537 adding 'starfish/core/experiment/builder/test/structured_formatter/test_tilepath.py' 2024-10-07T04:01:29,539 adding 'starfish/core/experiment/builder/test/structured_formatter/util.py' 2024-10-07T04:01:29,541 adding 'starfish/core/experiment/test/__init__.py' 2024-10-07T04:01:29,542 adding 'starfish/core/experiment/test/test_experiment.py' 2024-10-07T04:01:29,543 adding 'starfish/core/experiment/test/test_version.py' 2024-10-07T04:01:29,545 adding 'starfish/core/expression_matrix/__init__.py' 2024-10-07T04:01:29,546 adding 'starfish/core/expression_matrix/concatenate.py' 2024-10-07T04:01:29,548 adding 'starfish/core/expression_matrix/expression_matrix.py' 2024-10-07T04:01:29,549 adding 'starfish/core/expression_matrix/test/__init__.py' 2024-10-07T04:01:29,551 adding 'starfish/core/expression_matrix/test/test_concatenate.py' 2024-10-07T04:01:29,552 adding 'starfish/core/expression_matrix/test/test_serialization.py' 2024-10-07T04:01:29,554 adding 'starfish/core/image/__init__.py' 2024-10-07T04:01:29,556 adding 'starfish/core/image/Filter/__init__.py' 2024-10-07T04:01:29,557 adding 'starfish/core/image/Filter/_base.py' 2024-10-07T04:01:29,559 adding 'starfish/core/image/Filter/bandpass.py' 2024-10-07T04:01:29,561 adding 'starfish/core/image/Filter/call_bases.py' 2024-10-07T04:01:29,562 adding 'starfish/core/image/Filter/clip.py' 2024-10-07T04:01:29,564 adding 'starfish/core/image/Filter/clip_percentile_to_zero.py' 2024-10-07T04:01:29,565 adding 'starfish/core/image/Filter/clip_value_to_zero.py' 2024-10-07T04:01:29,567 adding 'starfish/core/image/Filter/element_wise_mult.py' 2024-10-07T04:01:29,568 adding 'starfish/core/image/Filter/gaussian_high_pass.py' 2024-10-07T04:01:29,570 adding 'starfish/core/image/Filter/gaussian_low_pass.py' 2024-10-07T04:01:29,572 adding 'starfish/core/image/Filter/ilastik_pre_trained_probability.py' 2024-10-07T04:01:29,573 adding 'starfish/core/image/Filter/laplace.py' 2024-10-07T04:01:29,575 adding 'starfish/core/image/Filter/linear_unmixing.py' 2024-10-07T04:01:29,576 adding 'starfish/core/image/Filter/map.py' 2024-10-07T04:01:29,577 adding 'starfish/core/image/Filter/match_histograms.py' 2024-10-07T04:01:29,579 adding 'starfish/core/image/Filter/mean_high_pass.py' 2024-10-07T04:01:29,581 adding 'starfish/core/image/Filter/reduce.py' 2024-10-07T04:01:29,582 adding 'starfish/core/image/Filter/richardson_lucy_deconvolution.py' 2024-10-07T04:01:29,584 adding 'starfish/core/image/Filter/util.py' 2024-10-07T04:01:29,585 adding 'starfish/core/image/Filter/white_tophat.py' 2024-10-07T04:01:29,586 adding 'starfish/core/image/Filter/zero_by_channel_magnitude.py' 2024-10-07T04:01:29,588 adding 'starfish/core/image/Filter/test/__init__.py' 2024-10-07T04:01:29,589 adding 'starfish/core/image/Filter/test/test_api_contract.py' 2024-10-07T04:01:29,591 adding 'starfish/core/image/Filter/test/test_call_bases.py' 2024-10-07T04:01:29,592 adding 'starfish/core/image/Filter/test/test_filter.py' 2024-10-07T04:01:29,593 adding 'starfish/core/image/Filter/test/test_histogram_matching.py' 2024-10-07T04:01:29,594 adding 'starfish/core/image/Filter/test/test_linear_unmixing.py' 2024-10-07T04:01:29,595 adding 'starfish/core/image/Filter/test/test_map.py' 2024-10-07T04:01:29,597 adding 'starfish/core/image/Filter/test/test_reduce.py' 2024-10-07T04:01:29,598 adding 'starfish/core/image/Filter/test/test_white_tophat.py' 2024-10-07T04:01:29,599 adding 'starfish/core/image/Filter/test/test_zero_by_channel_magnitude.py' 2024-10-07T04:01:29,601 adding 'starfish/core/image/Segment/__init__.py' 2024-10-07T04:01:29,602 adding 'starfish/core/image/Segment/_base.py' 2024-10-07T04:01:29,604 adding 'starfish/core/image/Segment/watershed.py' 2024-10-07T04:01:29,606 adding 'starfish/core/image/_registration/__init__.py' 2024-10-07T04:01:29,607 adding 'starfish/core/image/_registration/_format.py' 2024-10-07T04:01:29,608 adding 'starfish/core/image/_registration/transforms_list.py' 2024-10-07T04:01:29,610 adding 'starfish/core/image/_registration/ApplyTransform/__init__.py' 2024-10-07T04:01:29,611 adding 'starfish/core/image/_registration/ApplyTransform/_base.py' 2024-10-07T04:01:29,613 adding 'starfish/core/image/_registration/ApplyTransform/warp.py' 2024-10-07T04:01:29,614 adding 'starfish/core/image/_registration/ApplyTransform/test/__init__.py' 2024-10-07T04:01:29,616 adding 'starfish/core/image/_registration/ApplyTransform/test/test_warp.py' 2024-10-07T04:01:29,617 adding 'starfish/core/image/_registration/LearnTransform/__init__.py' 2024-10-07T04:01:29,619 adding 'starfish/core/image/_registration/LearnTransform/_base.py' 2024-10-07T04:01:29,620 adding 'starfish/core/image/_registration/LearnTransform/translation.py' 2024-10-07T04:01:29,622 adding 'starfish/core/image/_registration/LearnTransform/test/__init__.py' 2024-10-07T04:01:29,623 adding 'starfish/core/image/_registration/LearnTransform/test/test_translation.py' 2024-10-07T04:01:29,625 adding 'starfish/core/image/_registration/test/__init__.py' 2024-10-07T04:01:29,626 adding 'starfish/core/image/_registration/test/test_transforms_list.py' 2024-10-07T04:01:29,628 adding 'starfish/core/imagestack/__init__.py' 2024-10-07T04:01:29,629 adding 'starfish/core/imagestack/dataorder.py' 2024-10-07T04:01:29,634 adding 'starfish/core/imagestack/imagestack.py' 2024-10-07T04:01:29,636 adding 'starfish/core/imagestack/indexing_utils.py' 2024-10-07T04:01:29,637 adding 'starfish/core/imagestack/physical_coordinates.py' 2024-10-07T04:01:29,639 adding 'starfish/core/imagestack/parser/__init__.py' 2024-10-07T04:01:29,640 adding 'starfish/core/imagestack/parser/_key.py' 2024-10-07T04:01:29,642 adding 'starfish/core/imagestack/parser/_tiledata.py' 2024-10-07T04:01:29,644 adding 'starfish/core/imagestack/parser/crop.py' 2024-10-07T04:01:29,646 adding 'starfish/core/imagestack/parser/numpy/__init__.py' 2024-10-07T04:01:29,647 adding 'starfish/core/imagestack/parser/tilefetcher/__init__.py' 2024-10-07T04:01:29,649 adding 'starfish/core/imagestack/parser/tilefetcher/_parser.py' 2024-10-07T04:01:29,650 adding 'starfish/core/imagestack/parser/tileset/__init__.py' 2024-10-07T04:01:29,652 adding 'starfish/core/imagestack/parser/tileset/_parser.py' 2024-10-07T04:01:29,653 adding 'starfish/core/imagestack/test/__init__.py' 2024-10-07T04:01:29,655 adding 'starfish/core/imagestack/test/imagestack_test_utils.py' 2024-10-07T04:01:29,656 adding 'starfish/core/imagestack/test/test_apply.py' 2024-10-07T04:01:29,657 adding 'starfish/core/imagestack/test/test_coordinates.py' 2024-10-07T04:01:29,659 adding 'starfish/core/imagestack/test/test_cropped_load.py' 2024-10-07T04:01:29,660 adding 'starfish/core/imagestack/test/test_export.py' 2024-10-07T04:01:29,661 adding 'starfish/core/imagestack/test/test_from_numpy_array.py' 2024-10-07T04:01:29,663 adding 'starfish/core/imagestack/test/test_from_tilefetcher.py' 2024-10-07T04:01:29,664 adding 'starfish/core/imagestack/test/test_index.py' 2024-10-07T04:01:29,666 adding 'starfish/core/imagestack/test/test_labeled_indices.py' 2024-10-07T04:01:29,667 adding 'starfish/core/imagestack/test/test_max_proj.py' 2024-10-07T04:01:29,669 adding 'starfish/core/imagestack/test/test_metadata.py' 2024-10-07T04:01:29,670 adding 'starfish/core/imagestack/test/test_physical_coordinate_calculator.py' 2024-10-07T04:01:29,671 adding 'starfish/core/imagestack/test/test_slice_ops.py' 2024-10-07T04:01:29,672 adding 'starfish/core/imagestack/test/test_slicedimage_dtype.py' 2024-10-07T04:01:29,674 adding 'starfish/core/imagestack/test/factories/__init__.py' 2024-10-07T04:01:29,675 adding 'starfish/core/imagestack/test/factories/all_purpose.py' 2024-10-07T04:01:29,677 adding 'starfish/core/imagestack/test/factories/from_codebook.py' 2024-10-07T04:01:29,678 adding 'starfish/core/imagestack/test/factories/synthetic_stack.py' 2024-10-07T04:01:29,679 adding 'starfish/core/imagestack/test/factories/unique_tiles.py' 2024-10-07T04:01:29,681 adding 'starfish/core/imagestack/test/factories/with_coords.py' 2024-10-07T04:01:29,682 adding 'starfish/core/intensity_table/__init__.py' 2024-10-07T04:01:29,684 adding 'starfish/core/intensity_table/concatenate.py' 2024-10-07T04:01:29,686 adding 'starfish/core/intensity_table/decoded_intensity_table.py' 2024-10-07T04:01:29,688 adding 'starfish/core/intensity_table/intensity_table.py' 2024-10-07T04:01:29,689 adding 'starfish/core/intensity_table/intensity_table_coordinates.py' 2024-10-07T04:01:29,691 adding 'starfish/core/intensity_table/overlap.py' 2024-10-07T04:01:29,693 adding 'starfish/core/intensity_table/test/__init__.py' 2024-10-07T04:01:29,694 adding 'starfish/core/intensity_table/test/factories.py' 2024-10-07T04:01:29,695 adding 'starfish/core/intensity_table/test/test_concatenate.py' 2024-10-07T04:01:29,697 adding 'starfish/core/intensity_table/test/test_empty_intensity_table.py' 2024-10-07T04:01:29,698 adding 'starfish/core/intensity_table/test/test_from_imagestack.py' 2024-10-07T04:01:29,699 adding 'starfish/core/intensity_table/test/test_from_spot_data.py' 2024-10-07T04:01:29,701 adding 'starfish/core/intensity_table/test/test_intensity_table_coords.py' 2024-10-07T04:01:29,702 adding 'starfish/core/intensity_table/test/test_intensity_table_serialization.py' 2024-10-07T04:01:29,704 adding 'starfish/core/intensity_table/test/test_overlap.py' 2024-10-07T04:01:29,705 adding 'starfish/core/intensity_table/test/test_stack_intensity_table_reshaping.py' 2024-10-07T04:01:29,706 adding 'starfish/core/intensity_table/test/test_synthetic_intensities.py' 2024-10-07T04:01:29,707 adding 'starfish/core/intensity_table/test/test_to_mermaid.py' 2024-10-07T04:01:29,709 adding 'starfish/core/morphology/__init__.py' 2024-10-07T04:01:29,711 adding 'starfish/core/morphology/util.py' 2024-10-07T04:01:29,712 adding 'starfish/core/morphology/Binarize/__init__.py' 2024-10-07T04:01:29,714 adding 'starfish/core/morphology/Binarize/_base.py' 2024-10-07T04:01:29,715 adding 'starfish/core/morphology/Binarize/threshold.py' 2024-10-07T04:01:29,717 adding 'starfish/core/morphology/Binarize/test/__init__.py' 2024-10-07T04:01:29,718 adding 'starfish/core/morphology/Binarize/test/test_threshold.py' 2024-10-07T04:01:29,745 adding 'starfish/core/morphology/Filter/__init__.py' 2024-10-07T04:01:29,747 adding 'starfish/core/morphology/Filter/_base.py' 2024-10-07T04:01:29,748 adding 'starfish/core/morphology/Filter/areafilter.py' 2024-10-07T04:01:29,749 adding 'starfish/core/morphology/Filter/map.py' 2024-10-07T04:01:29,751 adding 'starfish/core/morphology/Filter/min_distance_label.py' 2024-10-07T04:01:29,752 adding 'starfish/core/morphology/Filter/reduce.py' 2024-10-07T04:01:29,753 adding 'starfish/core/morphology/Filter/structural_label.py' 2024-10-07T04:01:29,755 adding 'starfish/core/morphology/Filter/test/__init__.py' 2024-10-07T04:01:29,756 adding 'starfish/core/morphology/Filter/test/test_areafilter.py' 2024-10-07T04:01:29,758 adding 'starfish/core/morphology/Filter/test/test_map.py' 2024-10-07T04:01:29,759 adding 'starfish/core/morphology/Filter/test/test_reduce.py' 2024-10-07T04:01:29,761 adding 'starfish/core/morphology/Merge/__init__.py' 2024-10-07T04:01:29,762 adding 'starfish/core/morphology/Merge/_base.py' 2024-10-07T04:01:29,763 adding 'starfish/core/morphology/Merge/simple.py' 2024-10-07T04:01:29,765 adding 'starfish/core/morphology/Merge/test/__init__.py' 2024-10-07T04:01:29,766 adding 'starfish/core/morphology/Merge/test/test_simple.py' 2024-10-07T04:01:29,768 adding 'starfish/core/morphology/Segment/__init__.py' 2024-10-07T04:01:29,769 adding 'starfish/core/morphology/Segment/_base.py' 2024-10-07T04:01:29,770 adding 'starfish/core/morphology/Segment/watershed.py' 2024-10-07T04:01:29,772 adding 'starfish/core/morphology/binary_mask/__init__.py' 2024-10-07T04:01:29,774 adding 'starfish/core/morphology/binary_mask/_io.py' 2024-10-07T04:01:29,777 adding 'starfish/core/morphology/binary_mask/binary_mask.py' 2024-10-07T04:01:29,778 adding 'starfish/core/morphology/binary_mask/expand.py' 2024-10-07T04:01:29,780 adding 'starfish/core/morphology/binary_mask/test/__init__.py' 2024-10-07T04:01:29,781 adding 'starfish/core/morphology/binary_mask/test/factories.py' 2024-10-07T04:01:29,783 adding 'starfish/core/morphology/binary_mask/test/test_binary_mask.py' 2024-10-07T04:01:29,784 adding 'starfish/core/morphology/binary_mask/test/test_expand.py' 2024-10-07T04:01:29,786 adding 'starfish/core/morphology/binary_mask/test/test_from_binary_arrays_and_ticks.py' 2024-10-07T04:01:29,787 adding 'starfish/core/morphology/binary_mask/test/test_from_label_array_and_ticks.py' 2024-10-07T04:01:29,789 adding 'starfish/core/morphology/label_image/__init__.py' 2024-10-07T04:01:29,791 adding 'starfish/core/morphology/label_image/label_image.py' 2024-10-07T04:01:29,792 adding 'starfish/core/morphology/label_image/test/__init__.py' 2024-10-07T04:01:29,794 adding 'starfish/core/morphology/label_image/test/test_label_image.py' 2024-10-07T04:01:29,795 adding 'starfish/core/pipeline/__init__.py' 2024-10-07T04:01:29,797 adding 'starfish/core/pipeline/algorithmbase.py' 2024-10-07T04:01:29,798 adding 'starfish/core/segmentation_mask/__init__.py' 2024-10-07T04:01:29,800 adding 'starfish/core/segmentation_mask/segmentation_mask.py' 2024-10-07T04:01:29,801 adding 'starfish/core/spacetx_format/__init__.py' 2024-10-07T04:01:29,803 adding 'starfish/core/spacetx_format/cli.py' 2024-10-07T04:01:29,804 adding 'starfish/core/spacetx_format/test_codebook.py' 2024-10-07T04:01:29,805 adding 'starfish/core/spacetx_format/test_coordinates.py' 2024-10-07T04:01:29,807 adding 'starfish/core/spacetx_format/test_experiment.py' 2024-10-07T04:01:29,808 adding 'starfish/core/spacetx_format/test_field_of_view.py' 2024-10-07T04:01:29,809 adding 'starfish/core/spacetx_format/test_fov_manifest.py' 2024-10-07T04:01:29,811 adding 'starfish/core/spacetx_format/test_fuzz.py' 2024-10-07T04:01:29,813 adding 'starfish/core/spacetx_format/util.py' 2024-10-07T04:01:29,814 adding 'starfish/core/spacetx_format/validate_sptx.py' 2024-10-07T04:01:29,816 adding 'starfish/core/spots/__init__.py' 2024-10-07T04:01:29,817 adding 'starfish/core/spots/AssignTargets/__init__.py' 2024-10-07T04:01:29,819 adding 'starfish/core/spots/AssignTargets/_base.py' 2024-10-07T04:01:29,820 adding 'starfish/core/spots/AssignTargets/label.py' 2024-10-07T04:01:29,822 adding 'starfish/core/spots/DecodeSpots/__init__.py' 2024-10-07T04:01:29,823 adding 'starfish/core/spots/DecodeSpots/_base.py' 2024-10-07T04:01:29,826 adding 'starfish/core/spots/DecodeSpots/check_all_decoder.py' 2024-10-07T04:01:29,834 adding 'starfish/core/spots/DecodeSpots/check_all_funcs.py' 2024-10-07T04:01:29,836 adding 'starfish/core/spots/DecodeSpots/metric_decoder.py' 2024-10-07T04:01:29,838 adding 'starfish/core/spots/DecodeSpots/per_round_max_channel_decoder.py' 2024-10-07T04:01:29,839 adding 'starfish/core/spots/DecodeSpots/simple_lookup_decoder.py' 2024-10-07T04:01:29,840 adding 'starfish/core/spots/DecodeSpots/trace_builders.py' 2024-10-07T04:01:29,842 adding 'starfish/core/spots/DecodeSpots/util.py' 2024-10-07T04:01:29,843 adding 'starfish/core/spots/DecodeSpots/test/__init__.py' 2024-10-07T04:01:29,845 adding 'starfish/core/spots/DecodeSpots/test/test_check_all.py' 2024-10-07T04:01:29,847 adding 'starfish/core/spots/DecodeSpots/test/test_composite_codebook.py' 2024-10-07T04:01:29,848 adding 'starfish/core/spots/DecodeSpots/test/test_decoding_without_spots.py' 2024-10-07T04:01:29,850 adding 'starfish/core/spots/DecodeSpots/test/test_metric_decoder.py' 2024-10-07T04:01:29,851 adding 'starfish/core/spots/DecodeSpots/test/test_nearest_neighbor_trace_builder.py' 2024-10-07T04:01:29,852 adding 'starfish/core/spots/DecodeSpots/test/test_spot_finders.py' 2024-10-07T04:01:29,854 adding 'starfish/core/spots/DecodeSpots/test/test_trace_builders.py' 2024-10-07T04:01:29,855 adding 'starfish/core/spots/DetectPixels/__init__.py' 2024-10-07T04:01:29,857 adding 'starfish/core/spots/DetectPixels/_base.py' 2024-10-07T04:01:29,859 adding 'starfish/core/spots/DetectPixels/combine_adjacent_features.py' 2024-10-07T04:01:29,861 adding 'starfish/core/spots/DetectPixels/pixel_spot_decoder.py' 2024-10-07T04:01:29,862 adding 'starfish/core/spots/DetectPixels/test/__init__.py' 2024-10-07T04:01:29,864 adding 'starfish/core/spots/DetectPixels/test/test_calculate_mean_pixel_traces.py' 2024-10-07T04:01:29,865 adding 'starfish/core/spots/DetectPixels/test/test_create_spot_attributes.py' 2024-10-07T04:01:29,867 adding 'starfish/core/spots/DetectPixels/test/test_intensities_to_decoded_image.py' 2024-10-07T04:01:29,868 adding 'starfish/core/spots/DetectPixels/test/test_targets_map.py' 2024-10-07T04:01:29,870 adding 'starfish/core/spots/FindSpots/__init__.py' 2024-10-07T04:01:29,871 adding 'starfish/core/spots/FindSpots/_base.py' 2024-10-07T04:01:29,873 adding 'starfish/core/spots/FindSpots/blob.py' 2024-10-07T04:01:29,876 adding 'starfish/core/spots/FindSpots/local_max_peak_finder.py' 2024-10-07T04:01:29,877 adding 'starfish/core/spots/FindSpots/spot_finding_utils.py' 2024-10-07T04:01:29,879 adding 'starfish/core/spots/FindSpots/trackpy_local_max_peak_finder.py' 2024-10-07T04:01:29,881 adding 'starfish/core/spots/FindSpots/test/__init__.py' 2024-10-07T04:01:29,882 adding 'starfish/core/spots/FindSpots/test/test_local_max_peak_finder.py' 2024-10-07T04:01:29,884 adding 'starfish/core/spots/FindSpots/test/test_spot_detection.py' 2024-10-07T04:01:29,885 adding 'starfish/core/spots/FindSpots/test/test_synthetic_data.py' 2024-10-07T04:01:29,887 adding 'starfish/core/test/__init__.py' 2024-10-07T04:01:29,889 adding 'starfish/core/test/factories.py' 2024-10-07T04:01:29,891 adding 'starfish/core/test/test_display.py' 2024-10-07T04:01:29,892 adding 'starfish/core/test/test_multiprocessing_workflow.py' 2024-10-07T04:01:29,894 adding 'starfish/core/test/test_synthetic_spot_creation.py' 2024-10-07T04:01:29,896 adding 'starfish/core/types/__init__.py' 2024-10-07T04:01:29,897 adding 'starfish/core/types/_constants.py' 2024-10-07T04:01:29,898 adding 'starfish/core/types/_decoded_spots.py' 2024-10-07T04:01:29,900 adding 'starfish/core/types/_functionsource.py' 2024-10-07T04:01:29,901 adding 'starfish/core/types/_spot_attributes.py' 2024-10-07T04:01:29,903 adding 'starfish/core/types/_spot_finding_results.py' 2024-10-07T04:01:29,904 adding 'starfish/core/types/_validated_table.py' 2024-10-07T04:01:29,905 adding 'starfish/core/types/test/__init__.py' 2024-10-07T04:01:29,906 adding 'starfish/core/types/test/test_decoded_spots.py' 2024-10-07T04:01:29,908 adding 'starfish/core/types/test/test_saving_spots.py' 2024-10-07T04:01:29,909 adding 'starfish/core/util/__init__.py' 2024-10-07T04:01:29,910 adding 'starfish/core/util/argparse.py' 2024-10-07T04:01:29,911 adding 'starfish/core/util/clock.py' 2024-10-07T04:01:29,913 adding 'starfish/core/util/config.py' 2024-10-07T04:01:29,914 adding 'starfish/core/util/enum.py' 2024-10-07T04:01:29,915 adding 'starfish/core/util/exec.py' 2024-10-07T04:01:29,917 adding 'starfish/core/util/levels.py' 2024-10-07T04:01:29,919 adding 'starfish/core/util/logging.py' 2024-10-07T04:01:29,920 adding 'starfish/core/util/try_import.py' 2024-10-07T04:01:29,922 adding 'starfish/core/util/click/__init__.py' 2024-10-07T04:01:29,923 adding 'starfish/core/util/test/__init__.py' 2024-10-07T04:01:29,924 adding 'starfish/core/util/test/test_levels.py' 2024-10-07T04:01:29,926 adding 'starfish/core/util/test/test_preserve_float_range.py' 2024-10-07T04:01:29,927 adding 'starfish/experiment/__init__.py' 2024-10-07T04:01:29,929 adding 'starfish/experiment/builder.py' 2024-10-07T04:01:29,931 adding 'starfish/spacetx_format/examples/codebook/codebook.json' 2024-10-07T04:01:29,932 adding 'starfish/spacetx_format/examples/codebook/codebook_diagonal.json' 2024-10-07T04:01:29,933 adding 'starfish/spacetx_format/examples/codebook/codebook_diagonal_inferred_value.json' 2024-10-07T04:01:29,935 adding 'starfish/spacetx_format/examples/experiment/dartfish_experiment.json' 2024-10-07T04:01:29,936 adding 'starfish/spacetx_format/examples/experiment/experiment.json' 2024-10-07T04:01:29,937 adding 'starfish/spacetx_format/examples/experiment/no_fov_manifest.json' 2024-10-07T04:01:29,939 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_scalar.json' 2024-10-07T04:01:29,941 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_single.json' 2024-10-07T04:01:29,942 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_scalar.json' 2024-10-07T04:01:29,943 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_single.json' 2024-10-07T04:01:29,944 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_single.json' 2024-10-07T04:01:29,945 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_triple.json' 2024-10-07T04:01:29,946 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_good_max.json' 2024-10-07T04:01:29,947 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_good_min.json' 2024-10-07T04:01:29,949 adding 'starfish/spacetx_format/examples/field_of_view/dartfish_field_of_view.json' 2024-10-07T04:01:29,950 adding 'starfish/spacetx_format/examples/field_of_view/dartfish_nuclei.json' 2024-10-07T04:01:29,951 adding 'starfish/spacetx_format/examples/field_of_view/field_of_view.json' 2024-10-07T04:01:29,953 adding 'starfish/spacetx_format/examples/field_of_view/too_large.json' 2024-10-07T04:01:29,954 adding 'starfish/spacetx_format/examples/fov_manifest/fov_manifest.json' 2024-10-07T04:01:29,956 adding 'starfish/spacetx_format/schema/experiment_4.0.0.json' 2024-10-07T04:01:29,957 adding 'starfish/spacetx_format/schema/experiment_5.0.0.json' 2024-10-07T04:01:29,959 adding 'starfish/spacetx_format/schema/extras.json' 2024-10-07T04:01:29,960 adding 'starfish/spacetx_format/schema/fov_manifest_0.0.0.json' 2024-10-07T04:01:29,961 adding 'starfish/spacetx_format/schema/fov_manifest_0.1.0.json' 2024-10-07T04:01:29,962 adding 'starfish/spacetx_format/schema/version.json' 2024-10-07T04:01:29,964 adding 'starfish/spacetx_format/schema/codebook_0.0.0/codebook.json' 2024-10-07T04:01:29,965 adding 'starfish/spacetx_format/schema/codebook_0.0.0/codeword.json' 2024-10-07T04:01:29,967 adding 'starfish/spacetx_format/schema/field_of_view_0.0.0/field_of_view.json' 2024-10-07T04:01:29,968 adding 'starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/coordinates.json' 2024-10-07T04:01:29,970 adding 'starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/indices.json' 2024-10-07T04:01:29,971 adding 'starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/tiles.json' 2024-10-07T04:01:29,972 adding 'starfish/spacetx_format/schema/field_of_view_0.1.0/field_of_view.json' 2024-10-07T04:01:29,974 adding 'starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/coordinates.json' 2024-10-07T04:01:29,975 adding 'starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/indices.json' 2024-10-07T04:01:29,977 adding 'starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/tiles.json' 2024-10-07T04:01:29,978 adding 'starfish/test/__init__.py' 2024-10-07T04:01:29,980 adding 'starfish/test/full_pipelines/__init__.py' 2024-10-07T04:01:29,981 adding 'starfish/test/full_pipelines/api/__init__.py' 2024-10-07T04:01:29,983 adding 'starfish/test/full_pipelines/api/test_allen_smFISH.py' 2024-10-07T04:01:29,984 adding 'starfish/test/full_pipelines/api/test_dartfish.py' 2024-10-07T04:01:29,986 adding 'starfish/test/full_pipelines/api/test_iss_api.py' 2024-10-07T04:01:29,987 adding 'starfish/test/full_pipelines/api/test_iss_doc_pipeline.py' 2024-10-07T04:01:29,989 adding 'starfish/test/full_pipelines/api/test_merfish.py' 2024-10-07T04:01:29,991 adding 'starfish/util/__init__.py' 2024-10-07T04:01:29,992 adding 'starfish/util/plot.py' 2024-10-07T04:01:29,994 adding 'starfish-0.3.0.dist-info/LICENSE' 2024-10-07T04:01:29,995 adding 'starfish-0.3.0.dist-info/METADATA' 2024-10-07T04:01:29,997 adding 'starfish-0.3.0.dist-info/WHEEL' 2024-10-07T04:01:29,998 adding 'starfish-0.3.0.dist-info/entry_points.txt' 2024-10-07T04:01:29,998 adding 'starfish-0.3.0.dist-info/top_level.txt' 2024-10-07T04:01:30,004 adding 'starfish-0.3.0.dist-info/RECORD' 2024-10-07T04:01:30,013 removing build/bdist.linux-armv7l/wheel 2024-10-07T04:01:30,234 Building wheel for starfish (setup.py): finished with status 'done' 2024-10-07T04:01:30,241 Created wheel for starfish: filename=starfish-0.3.0-py3-none-any.whl size=390195 sha256=1ac4dc92bda40d503e8baad71786a0775446e90c082c9cfc77e7d53fa31244a0 2024-10-07T04:01:30,242 Stored in directory: /tmp/pip-ephem-wheel-cache-zfn4xdms/wheels/ed/d4/8a/59345c1f2a9dade648fd0be56e15f7381f6f1f53fbfd3bfaa3 2024-10-07T04:01:30,264 Successfully built starfish 2024-10-07T04:01:30,283 Removed build tracker: '/tmp/pip-build-tracker-jraahegg'