2024-10-11T17:59:13,508 Disabling truststore because Python version isn't 3.10+
2024-10-11T17:59:13,979 Created temporary directory: /tmp/pip-build-tracker-4l6vd39w
2024-10-11T17:59:13,980 Initialized build tracking at /tmp/pip-build-tracker-4l6vd39w
2024-10-11T17:59:13,980 Created build tracker: /tmp/pip-build-tracker-4l6vd39w
2024-10-11T17:59:13,980 Entered build tracker: /tmp/pip-build-tracker-4l6vd39w
2024-10-11T17:59:13,981 Created temporary directory: /tmp/pip-wheel-bmnf4z5a
2024-10-11T17:59:13,986 Created temporary directory: /tmp/pip-ephem-wheel-cache-gtgq6ie8
2024-10-11T17:59:14,029 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-10-11T17:59:14,032 2 location(s) to search for versions of sigprofilermatrixgenerator:
2024-10-11T17:59:14,032 * https://pypi.org/simple/sigprofilermatrixgenerator/
2024-10-11T17:59:14,032 * https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-10-11T17:59:14,033 Fetching project page and analyzing links: https://pypi.org/simple/sigprofilermatrixgenerator/
2024-10-11T17:59:14,033 Getting page https://pypi.org/simple/sigprofilermatrixgenerator/
2024-10-11T17:59:14,035 Found index url https://pypi.org/simple/
2024-10-11T17:59:14,058 Fetched page https://pypi.org/simple/sigprofilermatrixgenerator/ as application/vnd.pypi.simple.v1+json
2024-10-11T17:59:14,086   Found link https://files.pythonhosted.org/packages/c7/6a/28ddff4162d24d6994148c515057e5bfc71bb0183721f1ca875f6cc3c98a/SigProfilerMatrixGenerator-0.1.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.1
2024-10-11T17:59:14,087   Found link https://files.pythonhosted.org/packages/09/e0/a27c3a87eaa67985ed16425b07c6d0dbb9f2ed0bb370964a5eea8be9dc91/SigProfilerMatrixGenerator-0.1.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.2
2024-10-11T17:59:14,087   Found link https://files.pythonhosted.org/packages/bd/dd/b943503008f3dcda163b33e9402f52439b23c6b036cb328bcd37d6e7d010/SigProfilerMatrixGenerator-0.1.3.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.3
2024-10-11T17:59:14,087   Found link https://files.pythonhosted.org/packages/18/52/e8df4d5c50b73bee8f9ac77f5b30e1706176258c27c9ef81b20f467e3f60/SigProfilerMatrixGenerator-0.1.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.4
2024-10-11T17:59:14,088   Found link https://files.pythonhosted.org/packages/17/7b/f57ee232ba6fd2a0c0d49ce3777af69dea21e0ef979664825fbfd6e15d72/SigProfilerMatrixGenerator-0.1.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.5
2024-10-11T17:59:14,088   Found link https://files.pythonhosted.org/packages/7d/ea/fcb33c23e6653c3c50d6b438eb03cba08321e36d245b0642e4f4f29facd9/SigProfilerMatrixGenerator-0.1.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.6
2024-10-11T17:59:14,088   Found link https://files.pythonhosted.org/packages/f4/a3/770fcf7b2863289ff8d37137be8acc20995c64664d47dcd110dcaa8eedfb/SigProfilerMatrixGenerator-0.1.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.7
2024-10-11T17:59:14,088   Found link https://files.pythonhosted.org/packages/a9/0c/ae900daf1713185f851a882aafab8dbdf75cdd979fac87ac8b028ea3228e/SigProfilerMatrixGenerator-0.1.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.8
2024-10-11T17:59:14,089   Found link https://files.pythonhosted.org/packages/f9/58/915584f3317f44676353a359f2a91956fe9a1b4a7347487c0a6fe557b662/SigProfilerMatrixGenerator-0.1.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.9
2024-10-11T17:59:14,089   Found link https://files.pythonhosted.org/packages/e6/3a/9de0d7a6d81bcd6cf9386555aa3d0c8d9976927c066c9d05ce90fcc35f49/SigProfilerMatrixGenerator-0.1.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.10
2024-10-11T17:59:14,089   Found link https://files.pythonhosted.org/packages/a1/1f/2e6637742e6d3ef7aa0c36a946495fa8735826daadb50ae1939c6509bcb8/SigProfilerMatrixGenerator-0.1.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.11
2024-10-11T17:59:14,089   Found link https://files.pythonhosted.org/packages/9c/b9/5145722e31781332e84eba772a625e97101c77ac297e3f1c61384cee8f93/SigProfilerMatrixGenerator-0.1.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.12
2024-10-11T17:59:14,090   Found link https://files.pythonhosted.org/packages/56/03/e9e9b0dd8a36620b30677a94c2966d625c077727ab3c7c5ce657b75ddab1/SigProfilerMatrixGenerator-0.1.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.13
2024-10-11T17:59:14,090   Found link https://files.pythonhosted.org/packages/34/fc/a637b67b91bbc04cddaed487535962978a25e50face12c79da107a72e643/SigProfilerMatrixGenerator-0.1.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.14
2024-10-11T17:59:14,090   Found link https://files.pythonhosted.org/packages/be/d6/3678d80d2770647ee4ee99d672562fbe83e2ddebe4021ffdbe951410981e/SigProfilerMatrixGenerator-0.1.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.15
2024-10-11T17:59:14,090   Found link https://files.pythonhosted.org/packages/8f/46/07527d1d65dcad2f18876682b403ee40b8712a876894770519091819a94b/SigProfilerMatrixGenerator-0.1.16.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.16
2024-10-11T17:59:14,091   Found link https://files.pythonhosted.org/packages/0a/6f/fb786541b30b112da6f35604558b88f29adfd37b322e1bb477ead17ee013/SigProfilerMatrixGenerator-0.1.17.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.17
2024-10-11T17:59:14,091   Found link https://files.pythonhosted.org/packages/4c/be/499843893df4d02c0bdb5792039b9f550b358513fab7e252dc758fe461ab/SigProfilerMatrixGenerator-0.1.18.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.18
2024-10-11T17:59:14,091   Found link https://files.pythonhosted.org/packages/ce/31/b2b1bcda58e24b3a8c725477a0e1a6f41b0e9285741103f5deeb69bd0d04/SigProfilerMatrixGenerator-0.1.19.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.19
2024-10-11T17:59:14,092   Found link https://files.pythonhosted.org/packages/e1/21/fd9805121c089baa2223948e25ec2af1e8fdcde7544e433869740f1c0538/SigProfilerMatrixGenerator-0.1.20.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.20
2024-10-11T17:59:14,092   Found link https://files.pythonhosted.org/packages/9a/50/979cb4ca33ddd93a69ea767d17e17456f37f4466a7ba8f282ee55168c790/SigProfilerMatrixGenerator-0.1.21.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.21
2024-10-11T17:59:14,092   Found link https://files.pythonhosted.org/packages/e7/4b/f33f7d0898286be90c3db156863fafcde4e5e8f2ca4aef92e7c6f7424980/SigProfilerMatrixGenerator-0.1.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.22
2024-10-11T17:59:14,092   Found link https://files.pythonhosted.org/packages/c0/19/bfb595b2593be0eb945d196e1689714aade50c5ec43e96a351419579e18d/SigProfilerMatrixGenerator-0.1.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.23
2024-10-11T17:59:14,093   Found link https://files.pythonhosted.org/packages/e8/1c/7efb25df28e11476adad1e8cea8a2d8462d183175c7d4be29415fed872f3/SigProfilerMatrixGenerator-0.1.25.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.25
2024-10-11T17:59:14,093   Found link https://files.pythonhosted.org/packages/48/ca/6df1d33d4c0325190b09c0b2ff257cd46a97fe2b7136115a4ff5b1bcbb6d/SigProfilerMatrixGenerator-1.0.0.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.0
2024-10-11T17:59:14,093   Found link https://files.pythonhosted.org/packages/ae/1f/730357fb22484d14eb0cfe72e81962c2cfedf90cca75d94c6e1f88afb7b5/SigProfilerMatrixGenerator-1.0.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.1
2024-10-11T17:59:14,093   Found link https://files.pythonhosted.org/packages/8a/e3/1fc8743ee3078227377531039541b21553ab56fdc9914089aecaad18b218/SigProfilerMatrixGenerator-1.0.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.2
2024-10-11T17:59:14,094   Found link https://files.pythonhosted.org/packages/b3/89/6c10ccc120647b2b8a3ff3be7e12c8f0a7d3bbb648728a30e50a641fc5a2/SigProfilerMatrixGenerator-1.0.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.4
2024-10-11T17:59:14,094   Found link https://files.pythonhosted.org/packages/16/56/3e1fe788f9089baf807f1181061d68c19b0a3b4aa27cadedf86ffada0d6c/SigProfilerMatrixGenerator-1.0.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.5
2024-10-11T17:59:14,094   Found link https://files.pythonhosted.org/packages/31/23/bc67851b0fa5539bdb1528045700da2410ebbd4f771e493f7b5f17155365/SigProfilerMatrixGenerator-1.0.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.6
2024-10-11T17:59:14,094   Found link https://files.pythonhosted.org/packages/37/5e/7930da2d209c5944aae45447a8729c85958682f91ab8c5d2bca18ffcfab8/SigProfilerMatrixGenerator-1.0.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.7
2024-10-11T17:59:14,095   Found link https://files.pythonhosted.org/packages/12/c2/a1f85e85501667941a77de4751cd124173bb7dd6b37e5603d6818fbfa9ba/SigProfilerMatrixGenerator-1.0.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.8
2024-10-11T17:59:14,095   Found link https://files.pythonhosted.org/packages/68/8c/7923d4db4e08bbb467d66495f821f17ab2bed7e25b005b7fc153e2d08540/SigProfilerMatrixGenerator-1.0.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.9
2024-10-11T17:59:14,095   Found link https://files.pythonhosted.org/packages/57/3b/92569f53b63e6556dd46fcc514202e865878d7cb3b73f9481730d683f41c/SigProfilerMatrixGenerator-1.0.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.10
2024-10-11T17:59:14,095   Found link https://files.pythonhosted.org/packages/f7/4e/0d43742effcd43be3c8d865026b32017fa1407a6148bc0011dc4a8683509/SigProfilerMatrixGenerator-1.0.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.11
2024-10-11T17:59:14,096   Found link https://files.pythonhosted.org/packages/21/2e/5b81999306f02c711b74ce4c88a3725efb6502ce87b031a95e7f432715d2/SigProfilerMatrixGenerator-1.0.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.12
2024-10-11T17:59:14,096   Found link https://files.pythonhosted.org/packages/a6/ca/ec6bb5899fb7f42110102afa2636d04710b917e755b6b80fdef21e80c090/SigProfilerMatrixGenerator-1.0.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.13
2024-10-11T17:59:14,096   Found link https://files.pythonhosted.org/packages/aa/5f/9eb3e025425af0a8b4ab4dbd629158b53bdf092ec3ba73d87f5bb5af643a/SigProfilerMatrixGenerator-1.0.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.14
2024-10-11T17:59:14,097   Found link https://files.pythonhosted.org/packages/31/e8/5aacb489a0ad39cf892cbc7b91be93ee873e009a28c2ca0fda6ff210f1c2/SigProfilerMatrixGenerator-1.0.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.15
2024-10-11T17:59:14,097   Found link https://files.pythonhosted.org/packages/30/5a/62a7b4224b255e639b0177e9ddc719dce52ca0db701382e9c02a3267c1b3/SigProfilerMatrixGenerator-1.0.16.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.16
2024-10-11T17:59:14,097   Found link https://files.pythonhosted.org/packages/25/df/a04f48053469efffed5a2574bfdfd11f2fd6f6250596aebb9207fe5ddbd1/SigProfilerMatrixGenerator-1.0.17.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.17
2024-10-11T17:59:14,097   Found link https://files.pythonhosted.org/packages/e4/81/6e8a9f2c9b4454d8b7df1a2f889d9bfa20786f368469a0082859f9a226e9/SigProfilerMatrixGenerator-1.0.18.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.18
2024-10-11T17:59:14,098   Found link https://files.pythonhosted.org/packages/8c/07/d6e05005a349db7a2c6e33a03926a0dad081882cbd82781095070e5e6dd2/SigProfilerMatrixGenerator-1.0.19.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.19
2024-10-11T17:59:14,098   Found link https://files.pythonhosted.org/packages/e7/20/e149f3195446422925cf948bcc7e5aa8ccd6a89cd673d72aa481b7187e85/SigProfilerMatrixGenerator-1.0.20.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.20
2024-10-11T17:59:14,098   Found link https://files.pythonhosted.org/packages/dc/3f/3a10507445e03d04dcb132d4cf450a510f14076bb9b17284744cd9647cc6/SigProfilerMatrixGenerator-1.0.21.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.21
2024-10-11T17:59:14,098   Found link https://files.pythonhosted.org/packages/96/3f/4486e817c70d7d37084e168c33a8c77159c0cb5c931ab2afea1e771d94ed/SigProfilerMatrixGenerator-1.0.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.22
2024-10-11T17:59:14,099   Found link https://files.pythonhosted.org/packages/70/d6/0fb646f64373ff597bfc61020312d9f7ec781718043e5ab9e73348aaa77b/SigProfilerMatrixGenerator-1.0.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.23
2024-10-11T17:59:14,099   Found link https://files.pythonhosted.org/packages/cd/df/b2510bad2f657d52cfb18cab3de62b0de6fb7e7cab29bf7fb495eb97c731/SigProfilerMatrixGenerator-1.0.24.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.24
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2024-10-11T17:59:14,099   Found link https://files.pythonhosted.org/packages/74/e4/0946e6d541ac0b827722eba36fd908c90fd74e859f9bfdc423bd067d3595/SigProfilerMatrixGenerator-1.0.26.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.26
2024-10-11T17:59:14,100   Found link https://files.pythonhosted.org/packages/fe/ea/0c801757b97f261a9e4e1a4853a5b8debfff9570b28658ab842966a50e0f/SigProfilerMatrixGenerator-1.1.0.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.0
2024-10-11T17:59:14,100   Found link https://files.pythonhosted.org/packages/9f/b3/bfc2353a925e4adbaa27767e37fcf0df31a68fb78deacff8a52cb7fd7563/SigProfilerMatrixGenerator-1.1.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.1
2024-10-11T17:59:14,100   Found link https://files.pythonhosted.org/packages/f3/66/47c778b0e3eb8e486a92ef9449a94c7ca1ed43ff376c848f943dfde7c596/SigProfilerMatrixGenerator-1.1.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.2
2024-10-11T17:59:14,100   Found link https://files.pythonhosted.org/packages/d2/b1/9a5769d42d5d513cebb7bce116a823957ee2a49c32e068634c0294cca07c/SigProfilerMatrixGenerator-1.1.3.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.3
2024-10-11T17:59:14,101   Found link https://files.pythonhosted.org/packages/71/5d/0f501a5a374e675476177d0731c9e048ea6cc964902b185beb673849d0f0/SigProfilerMatrixGenerator-1.1.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.4
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2024-10-11T17:59:14,102   Found link https://files.pythonhosted.org/packages/f2/6f/3c38ca097d04587ea2807d6002783f4b5740cadfbb807d23c80b909aff13/SigProfilerMatrixGenerator-1.1.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.7
2024-10-11T17:59:14,102   Found link https://files.pythonhosted.org/packages/bd/48/84e1963975ceab1231f2913efcc3f7cb8cb48fd162e97c70fc1289c3132c/SigProfilerMatrixGenerator-1.1.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.8
2024-10-11T17:59:14,102   Found link https://files.pythonhosted.org/packages/23/0d/834403077582d0634f8134dc0356ec1a29901c22fb864cd0c541b1c231ef/SigProfilerMatrixGenerator-1.1.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.9
2024-10-11T17:59:14,102   Found link https://files.pythonhosted.org/packages/20/d7/3cc96e6bb315ec5dd52b2063a13d279276df7fe44475388c1c48c156c53c/SigProfilerMatrixGenerator-1.1.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.10
2024-10-11T17:59:14,103   Found link https://files.pythonhosted.org/packages/4d/9a/e833c99f878bf981d6c0a0ee6f2e61ffb700943be9135f777df873802444/SigProfilerMatrixGenerator-1.1.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.11
2024-10-11T17:59:14,103   Found link https://files.pythonhosted.org/packages/3a/1f/2af2e39b20153ff125e5a5eea041411141ee78935f3e6053be62c33df6e2/SigProfilerMatrixGenerator-1.1.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.12
2024-10-11T17:59:14,103   Found link https://files.pythonhosted.org/packages/31/09/67b586235317fb7f025b3958092e21cd4ac78a3e4868099147e5bbecb10d/SigProfilerMatrixGenerator-1.1.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.13
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2024-10-11T17:59:14,128   Found link https://files.pythonhosted.org/packages/17/31/d5ab5957d3267c803970d15aea1bb7363fbe61d20a26d24f393beadf665e/SigProfilerMatrixGenerator-1.2.27.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.27
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2024-10-11T17:59:14,130   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://files.pythonhosted.org/packages/58/49/f2d56087944c562c86f7071b4306d94894a200f0208be956e4d12b4fe5dc/SigProfilerMatrixGenerator-1.2.30-py3-none-any.whl (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
2024-10-11T17:59:14,130   Found link https://files.pythonhosted.org/packages/9a/87/627452fe76c9a58105fd5644a16aec98d00b837993af85d6d586578d9e5d/SigProfilerMatrixGenerator-1.2.30.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.30
2024-10-11T17:59:14,131 Fetching project page and analyzing links: https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-10-11T17:59:14,131 Getting page https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-10-11T17:59:14,132 Found index url https://www.piwheels.org/simple/
2024-10-11T17:59:14,173 Fetched page https://www.piwheels.org/simple/sigprofilermatrixgenerator/ as text/html
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2024-10-11T17:59:14,221   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.1-py3-none-any.whl#sha256=f3241561fcec6a5c0de8bfbff9666644aa97858abd6918f630b02cd0dc693be0 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,221   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.0-py3-none-any.whl#sha256=2baf8d7d7a986468236e54641751b8723ffb12c56ea21e1287a57ffded55eff2 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,221   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.25-py3-none-any.whl#sha256=aee497b7fad4bd30bfa688d613151b9673c70e2cf4b2904e9ba683b17712c980 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,221   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.23-py3-none-any.whl#sha256=dfa173d162a53137e68829a92518c083c9487cbe835d94364dec2ae7348e59c8 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,221   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.22-py3-none-any.whl#sha256=33b7f2f608e3bec7f43b5d3e971d8eab51c19febef85689b827ee22e0acfe80e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,221   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.21-py3-none-any.whl#sha256=9499c45cc55c74f2611b656cb8c826618e6c5dbf866d411f490f04d0f9426ad6 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,222   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.20-py3-none-any.whl#sha256=66a22a8ae93c7fb4e9baad202887e052740893fe0a61880b9f1ec95a09d1c0a0 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,222   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.19-py3-none-any.whl#sha256=365cdf3ead6ecb7d2cf9490b1fed6d629726f24d561d7630b30941cb1a29f348 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,222   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.18-py3-none-any.whl#sha256=449947ad34781b25cae1349dcd4b6d4549946ba009835356645bf7595b5c111a (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,222   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.17-py3-none-any.whl#sha256=ae0861d72d43dec0054d6516d9076cb80508514b36f46150767ab5341333d148 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,222   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.16-py3-none-any.whl#sha256=1001d7d6c2fa91680ec31c47ce6a079da2a667accc48484e0a7da3d77aac8740 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,223   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.15-py3-none-any.whl#sha256=288504536508f749d994d31930658f022b5401332bc810ded63b3cd0a49cef3e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,223   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.14-py3-none-any.whl#sha256=35fcddd4e462deee7959573e5e45dfa75d3f2b4ffce81939750a96eedac0b49d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,223   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.13-py3-none-any.whl#sha256=fbb27c504c29ed32596c118b00da8aa59f67854e86799b0b330f8a9f2470037a (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,223   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.12-py3-none-any.whl#sha256=24992b19ac04769baed3433c1b795f09597f608117d9e33c67bf40e474e99e84 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,223   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.11-py3-none-any.whl#sha256=c3b1761ab13a6dfb85050409e587eff691595bbf3b22248d8e45024792d0873d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,223   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.10-py3-none-any.whl#sha256=ee4542b0f7f955e9ed1a2377647dcdfe279cb2f4abb1c9f82f65331a696466e6 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,224   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.9-py3-none-any.whl#sha256=15e07c22774c555e633b3c7365931ec869749f9e93699b316ad8b88b90e98661 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,224   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.8-py3-none-any.whl#sha256=f8f015f2654820e23e139b06dad20b2b070c591cf3804c89728031fd465a1761 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,224   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.7-py3-none-any.whl#sha256=2b7197f9e7546455ecec51a3668c35746722be54000330897cdb3bab16b2846c (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,224   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.6-py3-none-any.whl#sha256=9bb77768a94a36b84528c72712dcbab7060347122efa53e72efa67f7db5a4c1d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,224   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.5-py3-none-any.whl#sha256=3bf26507e0f667a2958c8b58caa1307bf15b8dc11912252798fc227e99e98a0b (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,225   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.4-py3-none-any.whl#sha256=68f6f2f696d2ada3a780a59862675d42663d7c9e2e10563337ec01ab3e357dff (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,225   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.3-py3-none-any.whl#sha256=2c8f7184b84f55dd295a9ccbe96ba73b3f8746271bfd3844e25b8204b8df2044 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,225   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.2-py3-none-any.whl#sha256=a77ce882dc149901406d631720a444648a7acde033b8599373cd1cf50ea132b5 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,225   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.1-py3-none-any.whl#sha256=e2a5663dc832700fdb64b22350ca8b0d792920cd1a1ec3cbec1f670ebd911a30 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-10-11T17:59:14,225 Skipping link: not a file: https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-10-11T17:59:14,226 Skipping link: not a file: https://pypi.org/simple/sigprofilermatrixgenerator/
2024-10-11T17:59:14,255 Given no hashes to check 1 links for project 'sigprofilermatrixgenerator': discarding no candidates
2024-10-11T17:59:14,258 Collecting sigprofilermatrixgenerator==1.2.30
2024-10-11T17:59:14,260   Created temporary directory: /tmp/pip-unpack-plkvt9e9
2024-10-11T17:59:14,279   Downloading SigProfilerMatrixGenerator-1.2.30.tar.gz (40.5 MB)
2024-10-11T17:59:24,916   Added sigprofilermatrixgenerator==1.2.30 from https://files.pythonhosted.org/packages/9a/87/627452fe76c9a58105fd5644a16aec98d00b837993af85d6d586578d9e5d/SigProfilerMatrixGenerator-1.2.30.tar.gz to build tracker '/tmp/pip-build-tracker-4l6vd39w'
2024-10-11T17:59:24,918   Running setup.py (path:/tmp/pip-wheel-bmnf4z5a/sigprofilermatrixgenerator_fd6b53135a55444ab073ebf54f3e304c/setup.py) egg_info for package sigprofilermatrixgenerator
2024-10-11T17:59:24,919   Created temporary directory: /tmp/pip-pip-egg-info-3oz255jq
2024-10-11T17:59:24,919   Preparing metadata (setup.py): started
2024-10-11T17:59:24,920   Running command python setup.py egg_info
2024-10-11T17:59:26,056   running egg_info
2024-10-11T17:59:26,058   creating /tmp/pip-pip-egg-info-3oz255jq/SigProfilerMatrixGenerator.egg-info
2024-10-11T17:59:26,084   writing /tmp/pip-pip-egg-info-3oz255jq/SigProfilerMatrixGenerator.egg-info/PKG-INFO
2024-10-11T17:59:26,090   writing dependency_links to /tmp/pip-pip-egg-info-3oz255jq/SigProfilerMatrixGenerator.egg-info/dependency_links.txt
2024-10-11T17:59:26,091   writing entry points to /tmp/pip-pip-egg-info-3oz255jq/SigProfilerMatrixGenerator.egg-info/entry_points.txt
2024-10-11T17:59:26,094   writing requirements to /tmp/pip-pip-egg-info-3oz255jq/SigProfilerMatrixGenerator.egg-info/requires.txt
2024-10-11T17:59:26,095   writing top-level names to /tmp/pip-pip-egg-info-3oz255jq/SigProfilerMatrixGenerator.egg-info/top_level.txt
2024-10-11T17:59:26,097   writing manifest file '/tmp/pip-pip-egg-info-3oz255jq/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-10-11T17:59:26,182   reading manifest file '/tmp/pip-pip-egg-info-3oz255jq/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-10-11T17:59:26,184   reading manifest template 'MANIFEST.in'
2024-10-11T17:59:26,506   adding license file 'LICENSE'
2024-10-11T17:59:26,551   writing manifest file '/tmp/pip-pip-egg-info-3oz255jq/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-10-11T17:59:26,642   Preparing metadata (setup.py): finished with status 'done'
2024-10-11T17:59:26,647   Source in /tmp/pip-wheel-bmnf4z5a/sigprofilermatrixgenerator_fd6b53135a55444ab073ebf54f3e304c has version 1.2.30, which satisfies requirement sigprofilermatrixgenerator==1.2.30 from https://files.pythonhosted.org/packages/9a/87/627452fe76c9a58105fd5644a16aec98d00b837993af85d6d586578d9e5d/SigProfilerMatrixGenerator-1.2.30.tar.gz
2024-10-11T17:59:26,648   Removed sigprofilermatrixgenerator==1.2.30 from https://files.pythonhosted.org/packages/9a/87/627452fe76c9a58105fd5644a16aec98d00b837993af85d6d586578d9e5d/SigProfilerMatrixGenerator-1.2.30.tar.gz from build tracker '/tmp/pip-build-tracker-4l6vd39w'
2024-10-11T17:59:26,661 Created temporary directory: /tmp/pip-unpack-cjn5_llm
2024-10-11T17:59:26,662 Created temporary directory: /tmp/pip-unpack-1wczqmbk
2024-10-11T17:59:26,662 Building wheels for collected packages: sigprofilermatrixgenerator
2024-10-11T17:59:26,666   Created temporary directory: /tmp/pip-wheel-_4rfddpn
2024-10-11T17:59:26,666   Building wheel for sigprofilermatrixgenerator (setup.py): started
2024-10-11T17:59:26,667   Destination directory: /tmp/pip-wheel-_4rfddpn
2024-10-11T17:59:26,667   Running command python setup.py bdist_wheel
2024-10-11T17:59:27,693   running bdist_wheel
2024-10-11T17:59:27,825   running build
2024-10-11T17:59:27,826   running build_py
2024-10-11T17:59:27,855   creating build/lib/SigProfilerMatrixGenerator
2024-10-11T17:59:27,857   copying SigProfilerMatrixGenerator/test_helpers.py -> build/lib/SigProfilerMatrixGenerator
2024-10-11T17:59:27,860   copying SigProfilerMatrixGenerator/install.py -> build/lib/SigProfilerMatrixGenerator
2024-10-11T17:59:27,863   copying SigProfilerMatrixGenerator/version.py -> build/lib/SigProfilerMatrixGenerator
2024-10-11T17:59:27,864   copying SigProfilerMatrixGenerator/__init__.py -> build/lib/SigProfilerMatrixGenerator
2024-10-11T17:59:27,865   running egg_info
2024-10-11T17:59:27,892   writing SigProfilerMatrixGenerator.egg-info/PKG-INFO
2024-10-11T17:59:27,897   writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt
2024-10-11T17:59:27,898   writing entry points to SigProfilerMatrixGenerator.egg-info/entry_points.txt
2024-10-11T17:59:27,901   writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt
2024-10-11T17:59:27,902   writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt
2024-10-11T17:59:27,931   reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-10-11T17:59:27,987   reading manifest template 'MANIFEST.in'
2024-10-11T17:59:28,285   adding license file 'LICENSE'
2024-10-11T17:59:28,353   writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-10-11T17:59:28,358   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.controllers' is absent from the `packages` configuration.
2024-10-11T17:59:28,358   !!

2024-10-11T17:59:28,358           ********************************************************************************
2024-10-11T17:59:28,358           ############################
2024-10-11T17:59:28,358           # Package would be ignored #
2024-10-11T17:59:28,359           ############################
2024-10-11T17:59:28,359           Python recognizes 'SigProfilerMatrixGenerator.controllers' as an importable package[^1],
2024-10-11T17:59:28,359           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,359           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,359           package, please make sure that 'SigProfilerMatrixGenerator.controllers' is explicitly added
2024-10-11T17:59:28,359           to the `packages` configuration field.

2024-10-11T17:59:28,360           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,360           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,360           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,360           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,360           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,360           If you don't want 'SigProfilerMatrixGenerator.controllers' to be distributed and are
2024-10-11T17:59:28,361           already explicitly excluding 'SigProfilerMatrixGenerator.controllers' via
2024-10-11T17:59:28,361           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,361           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,361           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,361           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,361           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,362           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,362                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,362                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,362                 directory, all directories are treated like packages.
2024-10-11T17:59:28,362           ********************************************************************************

2024-10-11T17:59:28,362   !!
2024-10-11T17:59:28,362     check.warn(importable)
2024-10-11T17:59:28,363   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV' is absent from the `packages` configuration.
2024-10-11T17:59:28,363   !!

2024-10-11T17:59:28,363           ********************************************************************************
2024-10-11T17:59:28,363           ############################
2024-10-11T17:59:28,363           # Package would be ignored #
2024-10-11T17:59:28,363           ############################
2024-10-11T17:59:28,363           Python recognizes 'SigProfilerMatrixGenerator.references.CNV' as an importable package[^1],
2024-10-11T17:59:28,364           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,364           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,364           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV' is explicitly added
2024-10-11T17:59:28,364           to the `packages` configuration field.

2024-10-11T17:59:28,364           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,364           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,364           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,365           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,365           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,365           If you don't want 'SigProfilerMatrixGenerator.references.CNV' to be distributed and are
2024-10-11T17:59:28,365           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV' via
2024-10-11T17:59:28,365           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,365           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,366           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,366           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,366           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,366           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,366                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,367                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,367                 directory, all directories are treated like packages.
2024-10-11T17:59:28,367           ********************************************************************************

2024-10-11T17:59:28,367   !!
2024-10-11T17:59:28,367     check.warn(importable)
2024-10-11T17:59:28,367   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_input' is absent from the `packages` configuration.
2024-10-11T17:59:28,367   !!

2024-10-11T17:59:28,368           ********************************************************************************
2024-10-11T17:59:28,368           ############################
2024-10-11T17:59:28,368           # Package would be ignored #
2024-10-11T17:59:28,368           ############################
2024-10-11T17:59:28,368           Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_input' as an importable package[^1],
2024-10-11T17:59:28,368           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,368           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,368           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_input' is explicitly added
2024-10-11T17:59:28,369           to the `packages` configuration field.

2024-10-11T17:59:28,369           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,369           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,369           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,369           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,369           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,370           If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_input' to be distributed and are
2024-10-11T17:59:28,370           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_input' via
2024-10-11T17:59:28,370           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,370           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,370           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,370           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,371           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,371           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,371                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,371                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,371                 directory, all directories are treated like packages.
2024-10-11T17:59:28,371           ********************************************************************************

2024-10-11T17:59:28,372   !!
2024-10-11T17:59:28,372     check.warn(importable)
2024-10-11T17:59:28,372   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_output' is absent from the `packages` configuration.
2024-10-11T17:59:28,372   !!

2024-10-11T17:59:28,372           ********************************************************************************
2024-10-11T17:59:28,372           ############################
2024-10-11T17:59:28,372           # Package would be ignored #
2024-10-11T17:59:28,372           ############################
2024-10-11T17:59:28,373           Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_output' as an importable package[^1],
2024-10-11T17:59:28,373           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,373           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,373           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_output' is explicitly added
2024-10-11T17:59:28,373           to the `packages` configuration field.

2024-10-11T17:59:28,373           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,373           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,374           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,374           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,374           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,374           If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_output' to be distributed and are
2024-10-11T17:59:28,374           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_output' via
2024-10-11T17:59:28,374           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,375           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,375           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,375           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,375           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,375           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,376                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,376                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,376                 directory, all directories are treated like packages.
2024-10-11T17:59:28,376           ********************************************************************************

2024-10-11T17:59:28,376   !!
2024-10-11T17:59:28,376     check.warn(importable)
2024-10-11T17:59:28,376   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.SV' is absent from the `packages` configuration.
2024-10-11T17:59:28,376   !!

2024-10-11T17:59:28,377           ********************************************************************************
2024-10-11T17:59:28,377           ############################
2024-10-11T17:59:28,377           # Package would be ignored #
2024-10-11T17:59:28,377           ############################
2024-10-11T17:59:28,377           Python recognizes 'SigProfilerMatrixGenerator.references.SV' as an importable package[^1],
2024-10-11T17:59:28,377           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,377           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,378           package, please make sure that 'SigProfilerMatrixGenerator.references.SV' is explicitly added
2024-10-11T17:59:28,378           to the `packages` configuration field.

2024-10-11T17:59:28,378           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,378           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,378           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,378           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,379           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,379           If you don't want 'SigProfilerMatrixGenerator.references.SV' to be distributed and are
2024-10-11T17:59:28,379           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV' via
2024-10-11T17:59:28,379           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,379           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,379           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,380           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,380           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,380           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,380                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,380                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,380                 directory, all directories are treated like packages.
2024-10-11T17:59:28,380           ********************************************************************************

2024-10-11T17:59:28,381   !!
2024-10-11T17:59:28,381     check.warn(importable)
2024-10-11T17:59:28,381   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input' is absent from the `packages` configuration.
2024-10-11T17:59:28,381   !!

2024-10-11T17:59:28,381           ********************************************************************************
2024-10-11T17:59:28,381           ############################
2024-10-11T17:59:28,381           # Package would be ignored #
2024-10-11T17:59:28,382           ############################
2024-10-11T17:59:28,382           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input' as an importable package[^1],
2024-10-11T17:59:28,382           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,382           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,382           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input' is explicitly added
2024-10-11T17:59:28,382           to the `packages` configuration field.

2024-10-11T17:59:28,382           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,383           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,383           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,383           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,383           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,383           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input' to be distributed and are
2024-10-11T17:59:28,383           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input' via
2024-10-11T17:59:28,384           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,384           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,384           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,384           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,384           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,385           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,385                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,385                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,385                 directory, all directories are treated like packages.
2024-10-11T17:59:28,385           ********************************************************************************

2024-10-11T17:59:28,385   !!
2024-10-11T17:59:28,385     check.warn(importable)
2024-10-11T17:59:28,385   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is absent from the `packages` configuration.
2024-10-11T17:59:28,386   !!

2024-10-11T17:59:28,386           ********************************************************************************
2024-10-11T17:59:28,386           ############################
2024-10-11T17:59:28,386           # Package would be ignored #
2024-10-11T17:59:28,386           ############################
2024-10-11T17:59:28,386           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' as an importable package[^1],
2024-10-11T17:59:28,386           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,387           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,387           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is explicitly added
2024-10-11T17:59:28,387           to the `packages` configuration field.

2024-10-11T17:59:28,387           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,387           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,387           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,387           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,388           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,388           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' to be distributed and are
2024-10-11T17:59:28,388           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' via
2024-10-11T17:59:28,388           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,388           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,388           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,388           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,389           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,389           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,389                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,389                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,389                 directory, all directories are treated like packages.
2024-10-11T17:59:28,389           ********************************************************************************

2024-10-11T17:59:28,390   !!
2024-10-11T17:59:28,390     check.warn(importable)
2024-10-11T17:59:28,390   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' is absent from the `packages` configuration.
2024-10-11T17:59:28,390   !!

2024-10-11T17:59:28,390           ********************************************************************************
2024-10-11T17:59:28,390           ############################
2024-10-11T17:59:28,390           # Package would be ignored #
2024-10-11T17:59:28,391           ############################
2024-10-11T17:59:28,391           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' as an importable package[^1],
2024-10-11T17:59:28,391           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,391           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,391           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' is explicitly added
2024-10-11T17:59:28,391           to the `packages` configuration field.

2024-10-11T17:59:28,391           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,392           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,392           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,392           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,392           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,392           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' to be distributed and are
2024-10-11T17:59:28,392           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' via
2024-10-11T17:59:28,392           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,393           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,393           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,393           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,393           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,393           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,394                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,394                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,394                 directory, all directories are treated like packages.
2024-10-11T17:59:28,394           ********************************************************************************

2024-10-11T17:59:28,394   !!
2024-10-11T17:59:28,394     check.warn(importable)
2024-10-11T17:59:28,394   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is absent from the `packages` configuration.
2024-10-11T17:59:28,394   !!

2024-10-11T17:59:28,395           ********************************************************************************
2024-10-11T17:59:28,395           ############################
2024-10-11T17:59:28,395           # Package would be ignored #
2024-10-11T17:59:28,395           ############################
2024-10-11T17:59:28,395           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' as an importable package[^1],
2024-10-11T17:59:28,395           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,395           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,396           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is explicitly added
2024-10-11T17:59:28,396           to the `packages` configuration field.

2024-10-11T17:59:28,396           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,396           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,396           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,396           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,397           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,397           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' to be distributed and are
2024-10-11T17:59:28,397           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' via
2024-10-11T17:59:28,397           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,397           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,397           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,398           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,398           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,398           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,398                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,398                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,398                 directory, all directories are treated like packages.
2024-10-11T17:59:28,399           ********************************************************************************

2024-10-11T17:59:28,399   !!
2024-10-11T17:59:28,399     check.warn(importable)
2024-10-11T17:59:28,399   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome' is absent from the `packages` configuration.
2024-10-11T17:59:28,399   !!

2024-10-11T17:59:28,399           ********************************************************************************
2024-10-11T17:59:28,399           ############################
2024-10-11T17:59:28,400           # Package would be ignored #
2024-10-11T17:59:28,400           ############################
2024-10-11T17:59:28,400           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome' as an importable package[^1],
2024-10-11T17:59:28,400           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,400           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,400           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome' is explicitly added
2024-10-11T17:59:28,400           to the `packages` configuration field.

2024-10-11T17:59:28,401           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,401           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,401           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,401           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,401           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,401           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome' to be distributed and are
2024-10-11T17:59:28,402           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome' via
2024-10-11T17:59:28,402           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,402           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,402           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,402           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,402           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,403           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,403                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,403                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,403                 directory, all directories are treated like packages.
2024-10-11T17:59:28,403           ********************************************************************************

2024-10-11T17:59:28,403   !!
2024-10-11T17:59:28,403     check.warn(importable)
2024-10-11T17:59:28,404   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is absent from the `packages` configuration.
2024-10-11T17:59:28,404   !!

2024-10-11T17:59:28,404           ********************************************************************************
2024-10-11T17:59:28,404           ############################
2024-10-11T17:59:28,404           # Package would be ignored #
2024-10-11T17:59:28,404           ############################
2024-10-11T17:59:28,404           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' as an importable package[^1],
2024-10-11T17:59:28,405           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,405           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,405           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is explicitly added
2024-10-11T17:59:28,405           to the `packages` configuration field.

2024-10-11T17:59:28,405           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,405           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,405           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,406           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,406           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,406           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' to be distributed and are
2024-10-11T17:59:28,406           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' via
2024-10-11T17:59:28,406           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,406           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,407           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,407           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,407           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,407           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,407                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,408                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,408                 directory, all directories are treated like packages.
2024-10-11T17:59:28,408           ********************************************************************************

2024-10-11T17:59:28,408   !!
2024-10-11T17:59:28,408     check.warn(importable)
2024-10-11T17:59:28,408   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is absent from the `packages` configuration.
2024-10-11T17:59:28,408   !!

2024-10-11T17:59:28,409           ********************************************************************************
2024-10-11T17:59:28,409           ############################
2024-10-11T17:59:28,409           # Package would be ignored #
2024-10-11T17:59:28,409           ############################
2024-10-11T17:59:28,409           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' as an importable package[^1],
2024-10-11T17:59:28,409           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,409           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,409           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is explicitly added
2024-10-11T17:59:28,410           to the `packages` configuration field.

2024-10-11T17:59:28,410           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,410           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,410           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,410           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,410           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,411           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' to be distributed and are
2024-10-11T17:59:28,411           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' via
2024-10-11T17:59:28,411           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,411           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,411           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,411           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,411           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,412           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,412                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,412                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,412                 directory, all directories are treated like packages.
2024-10-11T17:59:28,412           ********************************************************************************

2024-10-11T17:59:28,412   !!
2024-10-11T17:59:28,413     check.warn(importable)
2024-10-11T17:59:28,413   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is absent from the `packages` configuration.
2024-10-11T17:59:28,413   !!

2024-10-11T17:59:28,413           ********************************************************************************
2024-10-11T17:59:28,413           ############################
2024-10-11T17:59:28,413           # Package would be ignored #
2024-10-11T17:59:28,413           ############################
2024-10-11T17:59:28,413           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' as an importable package[^1],
2024-10-11T17:59:28,414           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,414           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,414           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is explicitly added
2024-10-11T17:59:28,414           to the `packages` configuration field.

2024-10-11T17:59:28,414           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,414           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,414           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,415           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,415           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,415           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' to be distributed and are
2024-10-11T17:59:28,415           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' via
2024-10-11T17:59:28,415           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,415           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,416           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,416           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,416           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,416           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,416                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,417                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,417                 directory, all directories are treated like packages.
2024-10-11T17:59:28,417           ********************************************************************************

2024-10-11T17:59:28,417   !!
2024-10-11T17:59:28,417     check.warn(importable)
2024-10-11T17:59:28,417   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is absent from the `packages` configuration.
2024-10-11T17:59:28,417   !!

2024-10-11T17:59:28,418           ********************************************************************************
2024-10-11T17:59:28,418           ############################
2024-10-11T17:59:28,418           # Package would be ignored #
2024-10-11T17:59:28,418           ############################
2024-10-11T17:59:28,418           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' as an importable package[^1],
2024-10-11T17:59:28,418           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,418           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,418           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is explicitly added
2024-10-11T17:59:28,419           to the `packages` configuration field.

2024-10-11T17:59:28,419           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,419           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,419           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,419           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,419           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,420           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' to be distributed and are
2024-10-11T17:59:28,420           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' via
2024-10-11T17:59:28,420           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,420           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,420           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,420           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,421           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,421           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,421                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,421                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,421                 directory, all directories are treated like packages.
2024-10-11T17:59:28,421           ********************************************************************************

2024-10-11T17:59:28,422   !!
2024-10-11T17:59:28,422     check.warn(importable)
2024-10-11T17:59:28,422   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is absent from the `packages` configuration.
2024-10-11T17:59:28,422   !!

2024-10-11T17:59:28,422           ********************************************************************************
2024-10-11T17:59:28,422           ############################
2024-10-11T17:59:28,422           # Package would be ignored #
2024-10-11T17:59:28,422           ############################
2024-10-11T17:59:28,423           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' as an importable package[^1],
2024-10-11T17:59:28,423           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,423           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,423           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is explicitly added
2024-10-11T17:59:28,423           to the `packages` configuration field.

2024-10-11T17:59:28,423           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,423           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,424           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,424           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,424           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,424           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' to be distributed and are
2024-10-11T17:59:28,424           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' via
2024-10-11T17:59:28,424           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,425           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,425           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,425           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,425           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,425           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,426                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,426                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,426                 directory, all directories are treated like packages.
2024-10-11T17:59:28,426           ********************************************************************************

2024-10-11T17:59:28,426   !!
2024-10-11T17:59:28,426     check.warn(importable)
2024-10-11T17:59:28,426   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is absent from the `packages` configuration.
2024-10-11T17:59:28,426   !!

2024-10-11T17:59:28,427           ********************************************************************************
2024-10-11T17:59:28,427           ############################
2024-10-11T17:59:28,427           # Package would be ignored #
2024-10-11T17:59:28,427           ############################
2024-10-11T17:59:28,427           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' as an importable package[^1],
2024-10-11T17:59:28,427           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,427           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,428           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is explicitly added
2024-10-11T17:59:28,428           to the `packages` configuration field.

2024-10-11T17:59:28,428           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,428           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,428           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,428           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,429           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,429           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' to be distributed and are
2024-10-11T17:59:28,429           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' via
2024-10-11T17:59:28,429           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,429           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,429           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,429           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,430           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,430           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,430                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,430                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,430                 directory, all directories are treated like packages.
2024-10-11T17:59:28,430           ********************************************************************************

2024-10-11T17:59:28,430   !!
2024-10-11T17:59:28,431     check.warn(importable)
2024-10-11T17:59:28,431   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is absent from the `packages` configuration.
2024-10-11T17:59:28,431   !!

2024-10-11T17:59:28,431           ********************************************************************************
2024-10-11T17:59:28,431           ############################
2024-10-11T17:59:28,431           # Package would be ignored #
2024-10-11T17:59:28,431           ############################
2024-10-11T17:59:28,431           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' as an importable package[^1],
2024-10-11T17:59:28,431           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,432           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,432           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is explicitly added
2024-10-11T17:59:28,432           to the `packages` configuration field.

2024-10-11T17:59:28,432           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,432           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,432           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,433           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,433           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,433           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' to be distributed and are
2024-10-11T17:59:28,433           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' via
2024-10-11T17:59:28,433           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,433           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,433           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,434           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,434           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,434           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,434                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,434                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,434                 directory, all directories are treated like packages.
2024-10-11T17:59:28,435           ********************************************************************************

2024-10-11T17:59:28,435   !!
2024-10-11T17:59:28,435     check.warn(importable)
2024-10-11T17:59:28,435   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is absent from the `packages` configuration.
2024-10-11T17:59:28,435   !!

2024-10-11T17:59:28,435           ********************************************************************************
2024-10-11T17:59:28,435           ############################
2024-10-11T17:59:28,435           # Package would be ignored #
2024-10-11T17:59:28,436           ############################
2024-10-11T17:59:28,436           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' as an importable package[^1],
2024-10-11T17:59:28,436           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,436           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,436           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is explicitly added
2024-10-11T17:59:28,436           to the `packages` configuration field.

2024-10-11T17:59:28,437           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,437           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,437           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,437           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,437           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,437           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' to be distributed and are
2024-10-11T17:59:28,438           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' via
2024-10-11T17:59:28,438           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,438           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,438           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,438           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,438           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,439           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,439                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,439                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,439                 directory, all directories are treated like packages.
2024-10-11T17:59:28,439           ********************************************************************************

2024-10-11T17:59:28,439   !!
2024-10-11T17:59:28,439     check.warn(importable)
2024-10-11T17:59:28,439   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is absent from the `packages` configuration.
2024-10-11T17:59:28,440   !!

2024-10-11T17:59:28,440           ********************************************************************************
2024-10-11T17:59:28,440           ############################
2024-10-11T17:59:28,440           # Package would be ignored #
2024-10-11T17:59:28,440           ############################
2024-10-11T17:59:28,440           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' as an importable package[^1],
2024-10-11T17:59:28,440           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,441           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,441           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is explicitly added
2024-10-11T17:59:28,441           to the `packages` configuration field.

2024-10-11T17:59:28,441           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,441           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,441           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,441           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,442           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,442           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' to be distributed and are
2024-10-11T17:59:28,442           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' via
2024-10-11T17:59:28,442           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,442           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,442           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,443           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,443           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,443           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,443                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,443                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,443                 directory, all directories are treated like packages.
2024-10-11T17:59:28,443           ********************************************************************************

2024-10-11T17:59:28,444   !!
2024-10-11T17:59:28,444     check.warn(importable)
2024-10-11T17:59:28,444   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is absent from the `packages` configuration.
2024-10-11T17:59:28,444   !!

2024-10-11T17:59:28,444           ********************************************************************************
2024-10-11T17:59:28,444           ############################
2024-10-11T17:59:28,444           # Package would be ignored #
2024-10-11T17:59:28,444           ############################
2024-10-11T17:59:28,445           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' as an importable package[^1],
2024-10-11T17:59:28,445           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,445           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,445           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is explicitly added
2024-10-11T17:59:28,445           to the `packages` configuration field.

2024-10-11T17:59:28,445           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,445           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,446           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,446           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,446           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,446           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' to be distributed and are
2024-10-11T17:59:28,446           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' via
2024-10-11T17:59:28,446           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,447           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,447           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,447           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,447           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,447           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,447                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,448                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,448                 directory, all directories are treated like packages.
2024-10-11T17:59:28,448           ********************************************************************************

2024-10-11T17:59:28,448   !!
2024-10-11T17:59:28,448     check.warn(importable)
2024-10-11T17:59:28,448   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is absent from the `packages` configuration.
2024-10-11T17:59:28,448   !!

2024-10-11T17:59:28,449           ********************************************************************************
2024-10-11T17:59:28,449           ############################
2024-10-11T17:59:28,449           # Package would be ignored #
2024-10-11T17:59:28,449           ############################
2024-10-11T17:59:28,449           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' as an importable package[^1],
2024-10-11T17:59:28,449           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,449           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,449           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is explicitly added
2024-10-11T17:59:28,449           to the `packages` configuration field.

2024-10-11T17:59:28,450           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,450           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,450           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,450           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,450           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,450           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' to be distributed and are
2024-10-11T17:59:28,451           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' via
2024-10-11T17:59:28,451           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,451           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,451           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,451           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,451           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,452           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,452                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,452                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,452                 directory, all directories are treated like packages.
2024-10-11T17:59:28,452           ********************************************************************************

2024-10-11T17:59:28,452   !!
2024-10-11T17:59:28,452     check.warn(importable)
2024-10-11T17:59:28,453   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is absent from the `packages` configuration.
2024-10-11T17:59:28,453   !!

2024-10-11T17:59:28,453           ********************************************************************************
2024-10-11T17:59:28,453           ############################
2024-10-11T17:59:28,453           # Package would be ignored #
2024-10-11T17:59:28,453           ############################
2024-10-11T17:59:28,453           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' as an importable package[^1],
2024-10-11T17:59:28,453           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,454           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,454           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is explicitly added
2024-10-11T17:59:28,454           to the `packages` configuration field.

2024-10-11T17:59:28,454           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,454           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,454           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,454           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,455           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,455           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' to be distributed and are
2024-10-11T17:59:28,455           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' via
2024-10-11T17:59:28,455           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,455           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,455           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,456           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,456           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,456           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,456                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,456                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,457                 directory, all directories are treated like packages.
2024-10-11T17:59:28,457           ********************************************************************************

2024-10-11T17:59:28,457   !!
2024-10-11T17:59:28,457     check.warn(importable)
2024-10-11T17:59:28,457   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is absent from the `packages` configuration.
2024-10-11T17:59:28,457   !!

2024-10-11T17:59:28,457           ********************************************************************************
2024-10-11T17:59:28,457           ############################
2024-10-11T17:59:28,458           # Package would be ignored #
2024-10-11T17:59:28,458           ############################
2024-10-11T17:59:28,458           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' as an importable package[^1],
2024-10-11T17:59:28,458           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,458           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,458           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is explicitly added
2024-10-11T17:59:28,458           to the `packages` configuration field.

2024-10-11T17:59:28,459           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,459           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,459           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,459           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,459           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,459           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' to be distributed and are
2024-10-11T17:59:28,460           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' via
2024-10-11T17:59:28,460           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,460           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,460           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,460           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,460           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,461           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,461                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,461                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,461                 directory, all directories are treated like packages.
2024-10-11T17:59:28,461           ********************************************************************************

2024-10-11T17:59:28,461   !!
2024-10-11T17:59:28,461     check.warn(importable)
2024-10-11T17:59:28,462   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is absent from the `packages` configuration.
2024-10-11T17:59:28,462   !!

2024-10-11T17:59:28,462           ********************************************************************************
2024-10-11T17:59:28,462           ############################
2024-10-11T17:59:28,462           # Package would be ignored #
2024-10-11T17:59:28,462           ############################
2024-10-11T17:59:28,462           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' as an importable package[^1],
2024-10-11T17:59:28,462           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,463           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,463           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is explicitly added
2024-10-11T17:59:28,463           to the `packages` configuration field.

2024-10-11T17:59:28,463           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,463           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,463           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,464           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,464           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,464           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' to be distributed and are
2024-10-11T17:59:28,464           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' via
2024-10-11T17:59:28,464           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,464           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,464           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,465           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,465           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,465           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,465                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,465                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,465                 directory, all directories are treated like packages.
2024-10-11T17:59:28,465           ********************************************************************************

2024-10-11T17:59:28,466   !!
2024-10-11T17:59:28,466     check.warn(importable)
2024-10-11T17:59:28,466   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is absent from the `packages` configuration.
2024-10-11T17:59:28,466   !!

2024-10-11T17:59:28,466           ********************************************************************************
2024-10-11T17:59:28,466           ############################
2024-10-11T17:59:28,466           # Package would be ignored #
2024-10-11T17:59:28,467           ############################
2024-10-11T17:59:28,467           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' as an importable package[^1],
2024-10-11T17:59:28,467           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,467           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,467           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is explicitly added
2024-10-11T17:59:28,468           to the `packages` configuration field.

2024-10-11T17:59:28,468           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,468           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,468           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,468           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,469           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,469           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' to be distributed and are
2024-10-11T17:59:28,469           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' via
2024-10-11T17:59:28,469           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,469           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,469           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,470           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,470           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,470           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,470                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,470                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,470                 directory, all directories are treated like packages.
2024-10-11T17:59:28,471           ********************************************************************************

2024-10-11T17:59:28,471   !!
2024-10-11T17:59:28,471     check.warn(importable)
2024-10-11T17:59:28,471   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is absent from the `packages` configuration.
2024-10-11T17:59:28,471   !!

2024-10-11T17:59:28,471           ********************************************************************************
2024-10-11T17:59:28,471           ############################
2024-10-11T17:59:28,472           # Package would be ignored #
2024-10-11T17:59:28,472           ############################
2024-10-11T17:59:28,472           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' as an importable package[^1],
2024-10-11T17:59:28,472           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,472           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,472           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is explicitly added
2024-10-11T17:59:28,472           to the `packages` configuration field.

2024-10-11T17:59:28,472           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,473           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,473           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,473           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,473           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,473           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' to be distributed and are
2024-10-11T17:59:28,473           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' via
2024-10-11T17:59:28,474           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,474           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,474           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,474           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,474           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,475           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,475                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,475                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,475                 directory, all directories are treated like packages.
2024-10-11T17:59:28,475           ********************************************************************************

2024-10-11T17:59:28,475   !!
2024-10-11T17:59:28,475     check.warn(importable)
2024-10-11T17:59:28,475   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is absent from the `packages` configuration.
2024-10-11T17:59:28,476   !!

2024-10-11T17:59:28,476           ********************************************************************************
2024-10-11T17:59:28,476           ############################
2024-10-11T17:59:28,476           # Package would be ignored #
2024-10-11T17:59:28,476           ############################
2024-10-11T17:59:28,476           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' as an importable package[^1],
2024-10-11T17:59:28,476           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,477           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,477           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is explicitly added
2024-10-11T17:59:28,477           to the `packages` configuration field.

2024-10-11T17:59:28,477           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,477           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,477           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,477           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,478           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,478           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' to be distributed and are
2024-10-11T17:59:28,478           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' via
2024-10-11T17:59:28,478           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,478           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,478           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,478           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,479           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,479           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,479                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,479                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,479                 directory, all directories are treated like packages.
2024-10-11T17:59:28,479           ********************************************************************************

2024-10-11T17:59:28,480   !!
2024-10-11T17:59:28,480     check.warn(importable)
2024-10-11T17:59:28,480   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is absent from the `packages` configuration.
2024-10-11T17:59:28,480   !!

2024-10-11T17:59:28,480           ********************************************************************************
2024-10-11T17:59:28,480           ############################
2024-10-11T17:59:28,480           # Package would be ignored #
2024-10-11T17:59:28,480           ############################
2024-10-11T17:59:28,481           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' as an importable package[^1],
2024-10-11T17:59:28,481           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,481           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,481           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is explicitly added
2024-10-11T17:59:28,481           to the `packages` configuration field.

2024-10-11T17:59:28,481           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,481           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,481           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,482           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,482           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,482           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' to be distributed and are
2024-10-11T17:59:28,482           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' via
2024-10-11T17:59:28,482           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,482           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,482           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,483           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,483           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,483           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,483                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,483                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,484                 directory, all directories are treated like packages.
2024-10-11T17:59:28,484           ********************************************************************************

2024-10-11T17:59:28,484   !!
2024-10-11T17:59:28,484     check.warn(importable)
2024-10-11T17:59:28,484   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is absent from the `packages` configuration.
2024-10-11T17:59:28,484   !!

2024-10-11T17:59:28,484           ********************************************************************************
2024-10-11T17:59:28,485           ############################
2024-10-11T17:59:28,485           # Package would be ignored #
2024-10-11T17:59:28,485           ############################
2024-10-11T17:59:28,485           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' as an importable package[^1],
2024-10-11T17:59:28,485           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,485           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,485           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is explicitly added
2024-10-11T17:59:28,486           to the `packages` configuration field.

2024-10-11T17:59:28,486           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,486           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,486           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,486           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,486           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,487           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' to be distributed and are
2024-10-11T17:59:28,487           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' via
2024-10-11T17:59:28,487           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,487           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,487           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,487           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,488           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,488           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,488                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,488                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,488                 directory, all directories are treated like packages.
2024-10-11T17:59:28,488           ********************************************************************************

2024-10-11T17:59:28,488   !!
2024-10-11T17:59:28,489     check.warn(importable)
2024-10-11T17:59:28,489   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is absent from the `packages` configuration.
2024-10-11T17:59:28,489   !!

2024-10-11T17:59:28,489           ********************************************************************************
2024-10-11T17:59:28,489           ############################
2024-10-11T17:59:28,489           # Package would be ignored #
2024-10-11T17:59:28,489           ############################
2024-10-11T17:59:28,489           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' as an importable package[^1],
2024-10-11T17:59:28,490           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,490           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,490           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is explicitly added
2024-10-11T17:59:28,490           to the `packages` configuration field.

2024-10-11T17:59:28,490           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,490           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,490           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,491           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,491           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,491           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' to be distributed and are
2024-10-11T17:59:28,491           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' via
2024-10-11T17:59:28,491           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,491           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,491           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,492           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,492           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,492           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,492                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,492                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,493                 directory, all directories are treated like packages.
2024-10-11T17:59:28,493           ********************************************************************************

2024-10-11T17:59:28,493   !!
2024-10-11T17:59:28,493     check.warn(importable)
2024-10-11T17:59:28,493   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' is absent from the `packages` configuration.
2024-10-11T17:59:28,493   !!

2024-10-11T17:59:28,493           ********************************************************************************
2024-10-11T17:59:28,494           ############################
2024-10-11T17:59:28,494           # Package would be ignored #
2024-10-11T17:59:28,494           ############################
2024-10-11T17:59:28,494           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' as an importable package[^1],
2024-10-11T17:59:28,494           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,494           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,494           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' is explicitly added
2024-10-11T17:59:28,494           to the `packages` configuration field.

2024-10-11T17:59:28,495           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,495           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,495           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,495           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,495           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,495           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' to be distributed and are
2024-10-11T17:59:28,496           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' via
2024-10-11T17:59:28,496           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,496           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,496           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,496           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,496           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,497           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,497                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,497                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,497                 directory, all directories are treated like packages.
2024-10-11T17:59:28,497           ********************************************************************************

2024-10-11T17:59:28,497   !!
2024-10-11T17:59:28,497     check.warn(importable)
2024-10-11T17:59:28,497   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is absent from the `packages` configuration.
2024-10-11T17:59:28,498   !!

2024-10-11T17:59:28,498           ********************************************************************************
2024-10-11T17:59:28,498           ############################
2024-10-11T17:59:28,498           # Package would be ignored #
2024-10-11T17:59:28,498           ############################
2024-10-11T17:59:28,498           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' as an importable package[^1],
2024-10-11T17:59:28,498           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,499           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,499           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is explicitly added
2024-10-11T17:59:28,499           to the `packages` configuration field.

2024-10-11T17:59:28,499           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,499           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,499           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,499           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,500           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,500           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' to be distributed and are
2024-10-11T17:59:28,500           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' via
2024-10-11T17:59:28,500           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,500           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,500           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,501           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,501           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,501           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,501                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,501                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,501                 directory, all directories are treated like packages.
2024-10-11T17:59:28,501           ********************************************************************************

2024-10-11T17:59:28,502   !!
2024-10-11T17:59:28,502     check.warn(importable)
2024-10-11T17:59:28,502   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is absent from the `packages` configuration.
2024-10-11T17:59:28,502   !!

2024-10-11T17:59:28,502           ********************************************************************************
2024-10-11T17:59:28,502           ############################
2024-10-11T17:59:28,502           # Package would be ignored #
2024-10-11T17:59:28,503           ############################
2024-10-11T17:59:28,503           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' as an importable package[^1],
2024-10-11T17:59:28,503           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,503           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,503           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is explicitly added
2024-10-11T17:59:28,503           to the `packages` configuration field.

2024-10-11T17:59:28,503           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,503           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,504           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,504           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,504           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,504           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' to be distributed and are
2024-10-11T17:59:28,504           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' via
2024-10-11T17:59:28,504           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,505           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,505           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,505           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,505           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,505           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,505                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,506                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,506                 directory, all directories are treated like packages.
2024-10-11T17:59:28,506           ********************************************************************************

2024-10-11T17:59:28,506   !!
2024-10-11T17:59:28,506     check.warn(importable)
2024-10-11T17:59:28,506   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is absent from the `packages` configuration.
2024-10-11T17:59:28,506   !!

2024-10-11T17:59:28,507           ********************************************************************************
2024-10-11T17:59:28,507           ############################
2024-10-11T17:59:28,507           # Package would be ignored #
2024-10-11T17:59:28,507           ############################
2024-10-11T17:59:28,507           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' as an importable package[^1],
2024-10-11T17:59:28,507           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,507           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,507           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is explicitly added
2024-10-11T17:59:28,507           to the `packages` configuration field.

2024-10-11T17:59:28,508           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,508           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,508           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,508           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,508           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,509           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' to be distributed and are
2024-10-11T17:59:28,509           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' via
2024-10-11T17:59:28,509           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,509           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,509           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,509           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,509           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,510           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,510                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,510                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,510                 directory, all directories are treated like packages.
2024-10-11T17:59:28,510           ********************************************************************************

2024-10-11T17:59:28,510   !!
2024-10-11T17:59:28,510     check.warn(importable)
2024-10-11T17:59:28,511   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is absent from the `packages` configuration.
2024-10-11T17:59:28,511   !!

2024-10-11T17:59:28,511           ********************************************************************************
2024-10-11T17:59:28,511           ############################
2024-10-11T17:59:28,511           # Package would be ignored #
2024-10-11T17:59:28,511           ############################
2024-10-11T17:59:28,511           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' as an importable package[^1],
2024-10-11T17:59:28,511           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,512           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,512           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is explicitly added
2024-10-11T17:59:28,512           to the `packages` configuration field.

2024-10-11T17:59:28,512           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,512           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,512           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,512           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,513           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,513           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' to be distributed and are
2024-10-11T17:59:28,513           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' via
2024-10-11T17:59:28,513           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,513           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,513           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,514           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,514           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,514           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,514                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,514                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,514                 directory, all directories are treated like packages.
2024-10-11T17:59:28,514           ********************************************************************************

2024-10-11T17:59:28,515   !!
2024-10-11T17:59:28,515     check.warn(importable)
2024-10-11T17:59:28,515   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is absent from the `packages` configuration.
2024-10-11T17:59:28,515   !!

2024-10-11T17:59:28,515           ********************************************************************************
2024-10-11T17:59:28,515           ############################
2024-10-11T17:59:28,515           # Package would be ignored #
2024-10-11T17:59:28,515           ############################
2024-10-11T17:59:28,516           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' as an importable package[^1],
2024-10-11T17:59:28,516           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,516           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,516           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is explicitly added
2024-10-11T17:59:28,516           to the `packages` configuration field.

2024-10-11T17:59:28,516           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,517           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,517           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,517           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,517           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,517           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' to be distributed and are
2024-10-11T17:59:28,517           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' via
2024-10-11T17:59:28,518           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,518           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,518           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,518           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,518           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,518           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,519                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,519                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,519                 directory, all directories are treated like packages.
2024-10-11T17:59:28,519           ********************************************************************************

2024-10-11T17:59:28,519   !!
2024-10-11T17:59:28,519     check.warn(importable)
2024-10-11T17:59:28,519   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is absent from the `packages` configuration.
2024-10-11T17:59:28,519   !!

2024-10-11T17:59:28,520           ********************************************************************************
2024-10-11T17:59:28,520           ############################
2024-10-11T17:59:28,520           # Package would be ignored #
2024-10-11T17:59:28,520           ############################
2024-10-11T17:59:28,520           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' as an importable package[^1],
2024-10-11T17:59:28,520           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,520           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,520           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is explicitly added
2024-10-11T17:59:28,521           to the `packages` configuration field.

2024-10-11T17:59:28,521           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,521           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,521           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,521           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,521           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,522           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' to be distributed and are
2024-10-11T17:59:28,522           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' via
2024-10-11T17:59:28,522           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,522           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,522           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,522           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,522           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,523           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,523                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,523                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,523                 directory, all directories are treated like packages.
2024-10-11T17:59:28,523           ********************************************************************************

2024-10-11T17:59:28,523   !!
2024-10-11T17:59:28,524     check.warn(importable)
2024-10-11T17:59:28,524   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is absent from the `packages` configuration.
2024-10-11T17:59:28,524   !!

2024-10-11T17:59:28,524           ********************************************************************************
2024-10-11T17:59:28,524           ############################
2024-10-11T17:59:28,524           # Package would be ignored #
2024-10-11T17:59:28,524           ############################
2024-10-11T17:59:28,524           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' as an importable package[^1],
2024-10-11T17:59:28,524           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,525           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,525           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is explicitly added
2024-10-11T17:59:28,525           to the `packages` configuration field.

2024-10-11T17:59:28,525           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,525           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,525           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,526           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,526           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,526           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' to be distributed and are
2024-10-11T17:59:28,526           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' via
2024-10-11T17:59:28,526           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,526           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,526           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,527           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,527           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,527           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,527                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,527                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,527                 directory, all directories are treated like packages.
2024-10-11T17:59:28,528           ********************************************************************************

2024-10-11T17:59:28,528   !!
2024-10-11T17:59:28,528     check.warn(importable)
2024-10-11T17:59:28,528   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is absent from the `packages` configuration.
2024-10-11T17:59:28,528   !!

2024-10-11T17:59:28,528           ********************************************************************************
2024-10-11T17:59:28,528           ############################
2024-10-11T17:59:28,529           # Package would be ignored #
2024-10-11T17:59:28,529           ############################
2024-10-11T17:59:28,529           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' as an importable package[^1],
2024-10-11T17:59:28,529           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,529           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,529           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is explicitly added
2024-10-11T17:59:28,529           to the `packages` configuration field.

2024-10-11T17:59:28,529           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,530           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,530           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,530           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,530           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,530           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' to be distributed and are
2024-10-11T17:59:28,530           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' via
2024-10-11T17:59:28,531           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,531           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,531           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,531           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,531           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,532           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,532                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,532                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,532                 directory, all directories are treated like packages.
2024-10-11T17:59:28,532           ********************************************************************************

2024-10-11T17:59:28,532   !!
2024-10-11T17:59:28,532     check.warn(importable)
2024-10-11T17:59:28,532   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is absent from the `packages` configuration.
2024-10-11T17:59:28,533   !!

2024-10-11T17:59:28,533           ********************************************************************************
2024-10-11T17:59:28,533           ############################
2024-10-11T17:59:28,533           # Package would be ignored #
2024-10-11T17:59:28,533           ############################
2024-10-11T17:59:28,533           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' as an importable package[^1],
2024-10-11T17:59:28,533           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,533           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,534           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is explicitly added
2024-10-11T17:59:28,534           to the `packages` configuration field.

2024-10-11T17:59:28,534           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,534           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,534           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,534           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,535           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,535           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' to be distributed and are
2024-10-11T17:59:28,535           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' via
2024-10-11T17:59:28,535           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,535           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,535           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,535           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,536           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,536           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,536                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,536                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,536                 directory, all directories are treated like packages.
2024-10-11T17:59:28,536           ********************************************************************************

2024-10-11T17:59:28,537   !!
2024-10-11T17:59:28,537     check.warn(importable)
2024-10-11T17:59:28,537   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is absent from the `packages` configuration.
2024-10-11T17:59:28,537   !!

2024-10-11T17:59:28,537           ********************************************************************************
2024-10-11T17:59:28,537           ############################
2024-10-11T17:59:28,537           # Package would be ignored #
2024-10-11T17:59:28,537           ############################
2024-10-11T17:59:28,538           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' as an importable package[^1],
2024-10-11T17:59:28,538           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,538           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,538           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is explicitly added
2024-10-11T17:59:28,538           to the `packages` configuration field.

2024-10-11T17:59:28,538           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,538           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,538           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,539           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,539           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,539           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' to be distributed and are
2024-10-11T17:59:28,539           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' via
2024-10-11T17:59:28,539           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,539           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,540           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,540           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,540           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,540           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,540                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,540                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,541                 directory, all directories are treated like packages.
2024-10-11T17:59:28,541           ********************************************************************************

2024-10-11T17:59:28,541   !!
2024-10-11T17:59:28,541     check.warn(importable)
2024-10-11T17:59:28,541   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' is absent from the `packages` configuration.
2024-10-11T17:59:28,541   !!

2024-10-11T17:59:28,541           ********************************************************************************
2024-10-11T17:59:28,542           ############################
2024-10-11T17:59:28,542           # Package would be ignored #
2024-10-11T17:59:28,542           ############################
2024-10-11T17:59:28,542           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' as an importable package[^1],
2024-10-11T17:59:28,542           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,542           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,542           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' is explicitly added
2024-10-11T17:59:28,542           to the `packages` configuration field.

2024-10-11T17:59:28,543           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,543           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,543           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,543           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,543           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,543           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' to be distributed and are
2024-10-11T17:59:28,543           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' via
2024-10-11T17:59:28,544           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,544           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,544           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,544           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,544           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,545           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,545                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,545                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,545                 directory, all directories are treated like packages.
2024-10-11T17:59:28,545           ********************************************************************************

2024-10-11T17:59:28,545   !!
2024-10-11T17:59:28,545     check.warn(importable)
2024-10-11T17:59:28,545   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is absent from the `packages` configuration.
2024-10-11T17:59:28,546   !!

2024-10-11T17:59:28,546           ********************************************************************************
2024-10-11T17:59:28,546           ############################
2024-10-11T17:59:28,546           # Package would be ignored #
2024-10-11T17:59:28,546           ############################
2024-10-11T17:59:28,546           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' as an importable package[^1],
2024-10-11T17:59:28,546           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,546           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,547           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is explicitly added
2024-10-11T17:59:28,547           to the `packages` configuration field.

2024-10-11T17:59:28,547           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,547           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,547           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,547           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,548           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,548           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' to be distributed and are
2024-10-11T17:59:28,548           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' via
2024-10-11T17:59:28,548           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,548           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,548           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,549           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,549           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,549           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,549                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,549                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,550                 directory, all directories are treated like packages.
2024-10-11T17:59:28,550           ********************************************************************************

2024-10-11T17:59:28,550   !!
2024-10-11T17:59:28,550     check.warn(importable)
2024-10-11T17:59:28,550   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.scripts' is absent from the `packages` configuration.
2024-10-11T17:59:28,550   !!

2024-10-11T17:59:28,551           ********************************************************************************
2024-10-11T17:59:28,551           ############################
2024-10-11T17:59:28,551           # Package would be ignored #
2024-10-11T17:59:28,551           ############################
2024-10-11T17:59:28,551           Python recognizes 'SigProfilerMatrixGenerator.scripts' as an importable package[^1],
2024-10-11T17:59:28,551           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,552           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,552           package, please make sure that 'SigProfilerMatrixGenerator.scripts' is explicitly added
2024-10-11T17:59:28,552           to the `packages` configuration field.

2024-10-11T17:59:28,552           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,552           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,552           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,552           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,553           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,553           If you don't want 'SigProfilerMatrixGenerator.scripts' to be distributed and are
2024-10-11T17:59:28,553           already explicitly excluding 'SigProfilerMatrixGenerator.scripts' via
2024-10-11T17:59:28,553           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,553           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,553           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,554           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,554           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,554           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,554                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,555                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,555                 directory, all directories are treated like packages.
2024-10-11T17:59:28,555           ********************************************************************************

2024-10-11T17:59:28,555   !!
2024-10-11T17:59:28,555     check.warn(importable)
2024-10-11T17:59:28,555   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:218: _Warning: Package 'SigProfilerMatrixGenerator.scripts.Benchmark' is absent from the `packages` configuration.
2024-10-11T17:59:28,555   !!

2024-10-11T17:59:28,556           ********************************************************************************
2024-10-11T17:59:28,556           ############################
2024-10-11T17:59:28,556           # Package would be ignored #
2024-10-11T17:59:28,556           ############################
2024-10-11T17:59:28,556           Python recognizes 'SigProfilerMatrixGenerator.scripts.Benchmark' as an importable package[^1],
2024-10-11T17:59:28,556           but it is absent from setuptools' `packages` configuration.

2024-10-11T17:59:28,557           This leads to an ambiguous overall configuration. If you want to distribute this
2024-10-11T17:59:28,557           package, please make sure that 'SigProfilerMatrixGenerator.scripts.Benchmark' is explicitly added
2024-10-11T17:59:28,557           to the `packages` configuration field.

2024-10-11T17:59:28,557           Alternatively, you can also rely on setuptools' discovery methods
2024-10-11T17:59:28,557           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-10-11T17:59:28,557           instead of `find_packages(...)`/`find:`).

2024-10-11T17:59:28,558           You can read more about "package discovery" on setuptools documentation page:

2024-10-11T17:59:28,558           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-10-11T17:59:28,558           If you don't want 'SigProfilerMatrixGenerator.scripts.Benchmark' to be distributed and are
2024-10-11T17:59:28,558           already explicitly excluding 'SigProfilerMatrixGenerator.scripts.Benchmark' via
2024-10-11T17:59:28,558           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-10-11T17:59:28,558           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-10-11T17:59:28,559           combination with a more fine grained `package-data` configuration.

2024-10-11T17:59:28,559           You can read more about "package data files" on setuptools documentation page:

2024-10-11T17:59:28,559           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-10-11T17:59:28,559           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-10-11T17:59:28,559                 even if it does not contain any `.py` files.
2024-10-11T17:59:28,560                 On the other hand, currently there is no concept of package data
2024-10-11T17:59:28,560                 directory, all directories are treated like packages.
2024-10-11T17:59:28,560           ********************************************************************************

2024-10-11T17:59:28,560   !!
2024-10-11T17:59:28,560     check.warn(importable)
2024-10-11T17:59:28,560   creating build/lib/SigProfilerMatrixGenerator/controllers
2024-10-11T17:59:28,561   copying SigProfilerMatrixGenerator/controllers/__init__.py -> build/lib/SigProfilerMatrixGenerator/controllers
2024-10-11T17:59:28,561   copying SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/lib/SigProfilerMatrixGenerator/controllers
2024-10-11T17:59:28,561   creating build/lib/SigProfilerMatrixGenerator/references/CNV
2024-10-11T17:59:28,561   copying SigProfilerMatrixGenerator/references/CNV/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-10-11T17:59:28,561   copying SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-10-11T17:59:28,561   copying SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-10-11T17:59:28,562   creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-10-11T17:59:28,563   copying SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-10-11T17:59:28,580   copying SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-10-11T17:59:28,589   creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_output
2024-10-11T17:59:28,590   copying SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_output
2024-10-11T17:59:28,592   creating build/lib/SigProfilerMatrixGenerator/references/SV
2024-10-11T17:59:28,593   copying SigProfilerMatrixGenerator/references/SV/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/SV
2024-10-11T17:59:28,596   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input
2024-10-11T17:59:28,597   copying SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input
2024-10-11T17:59:28,599   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,601   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,604   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,606   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,608   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,610   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,613   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,615   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,617   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,619   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,622   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,625   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,627   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,630   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,633   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,635   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,637   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,639   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,642   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,644   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,646   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,649   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,651   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,654   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,656   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,659   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,661   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,663   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,666   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,669   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,672   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,674   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,677   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,679   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,682   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,684   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,686   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,689   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,691   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,694   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,697   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,699   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,702   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,705   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,708   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,710   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,713   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,715   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,717   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,719   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,721   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:28,723   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,725   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,727   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,730   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,732   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,734   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,736   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,738   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,740   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,742   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,744   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,747   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,749   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,752   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,755   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,757   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,760   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,763   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,766   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,769   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,771   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,774   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,777   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,779   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,781   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,783   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,786   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,789   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,793   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,796   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,798   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,801   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,804   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,806   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,809   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,811   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,814   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,817   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,819   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,823   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,825   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,828   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,830   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,833   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,835   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,837   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,839   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,841   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,843   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,847   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,849   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:28,851   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,852   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,861   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.purple.sv.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,870   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,872   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,874   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,877   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,879   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,918   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,953   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,955   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,957   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,959   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,961   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,964   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:28,966   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:28,967   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:28,972   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:28,976   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:28,978   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:28,980   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:28,983   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:28,986   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:28,988   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:28,997   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,004   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,006   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,009   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,011   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,014   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,016   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,019   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,021   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,025   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,029   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,032   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,034   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,037   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,039   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,041   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,051   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,058   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,060   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,063   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,065   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,068   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,070   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,072   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,074   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,078   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,081   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,084   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,086   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,089   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,092   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,094   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,102   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,107   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,110   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,112   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,115   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,117   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,119   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,121   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,123   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,127   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,130   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,133   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,135   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,138   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,140   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,142   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,148   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,155   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,157   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,159   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,162   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,164   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,166   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,168   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,170   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,175   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,179   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,181   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,183   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,185   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,188   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,190   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,198   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,204   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,206   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,209   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,212   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,215   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,217   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,219   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,222   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,224   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,229   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,231   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,233   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,236   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,241   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,245   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,252   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,260   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,262   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,265   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,267   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,269   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,272   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,275   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,279   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,283   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,299   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,312   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,332   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,353   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,356   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,358   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,360   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,362   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,365   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,368   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,370   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,373   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,376   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,379   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,382   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,384   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,387   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,389   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,391   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,394   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,397   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,401   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,407   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,414   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,420   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,422   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,425   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,427   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,429   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,432   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,436   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,441   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,445   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,470   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,489   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,518   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,542   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,544   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,546   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,549   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,551   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,553   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,556   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,559   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,562   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,565   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,567   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,570   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,573   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,575   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,577   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,580   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,582   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,587   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,591   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,597   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,602   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,605   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,607   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,609   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,611   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,614   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,617   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,620   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,623   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,637   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,651   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,672   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,690   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,692   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,694   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,697   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,699   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,702   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,705   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,709   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,711   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,714   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,718   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,721   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,723   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,726   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,729   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,731   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,737   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,741   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,748   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,754   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,757   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,759   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,762   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,764   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,767   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,771   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,775   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,778   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,788   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,799   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,819   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,835   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,837   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,839   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,841   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,843   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,846   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,849   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,851   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,854   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,857   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,860   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,862   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,865   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,867   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,870   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,872   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,875   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,879   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,884   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,890   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,895   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,898   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,900   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,902   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,904   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,907   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,911   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,914   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,917   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,932   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,946   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,959   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,970   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,973   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,975   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,977   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,979   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,981   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,984   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,986   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,989   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,992   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:29,997   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:30,000   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:30,003   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:30,006   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:30,024   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:30,026   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:30,029   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:30,031   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:30,033   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-10-11T17:59:30,035   copying SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-10-11T17:59:30,037   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-10-11T17:59:30,038   copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-10-11T17:59:30,302   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-10-11T17:59:30,304   copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-10-11T17:59:30,391   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-10-11T17:59:30,392   copying SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-10-11T17:59:30,590   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-10-11T17:59:30,591   copying SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-10-11T17:59:30,661   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-10-11T17:59:30,662   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-10-11T17:59:30,665   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-10-11T17:59:30,667   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-10-11T17:59:30,670   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-10-11T17:59:30,671   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-10-11T17:59:30,744   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-10-11T17:59:30,745   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-10-11T17:59:30,826   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-10-11T17:59:30,827   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-10-11T17:59:30,898   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-10-11T17:59:30,899   copying SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-10-11T17:59:31,225   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-10-11T17:59:31,226   copying SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-10-11T17:59:31,232   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-10-11T17:59:31,233   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-10-11T17:59:31,235   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,236   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,242   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,251   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,260   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,264   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,270   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,276   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,284   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,293   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,298   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,308   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,320   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,325   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,329   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,333   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,342   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,350   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,358   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,366   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,375   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,384   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,391   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,398   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,400   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,407   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:31,410   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,411   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,418   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,430   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,438   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,442   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,449   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,454   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,464   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,476   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,481   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,494   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,509   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,515   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,519   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,525   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,537   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,548   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,556   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,565   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,574   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,581   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,587   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,594   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,596   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,603   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:31,606   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:31,607   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:31,617   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:31,629   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:31,641   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:31,651   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:31,653   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:31,668   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:31,677   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,679   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,683   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,686   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,690   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,693   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,697   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,700   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,703   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,707   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,711   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,714   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,719   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,724   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,727   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,730   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,733   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,737   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,740   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,743   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,747   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,750   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,753   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,757   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,761   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,763   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,766   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,769   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,772   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,775   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,778   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,781   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,784   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,787   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,791   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,796   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,800   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,804   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,808   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,813   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:31,818   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-10-11T17:59:31,819   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-10-11T17:59:31,821   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,823   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,830   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,839   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,844   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,849   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,854   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,860   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,865   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,872   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,877   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,882   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,891   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,900   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,906   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,913   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,920   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,927   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,936   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,942   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,948   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,950   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,956   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:31,959   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:31,960   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:31,967   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:31,974   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:31,980   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:31,986   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:31,993   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:31,999   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,005   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,013   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,019   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,025   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,034   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,046   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,054   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,061   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,068   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,077   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,090   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,097   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,104   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,110   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:32,113   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,114   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,121   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,133   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,138   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,143   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,151   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,158   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,164   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,171   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,176   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,181   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,189   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,204   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,216   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,234   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,251   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,261   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,271   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,278   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,286   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,289   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,295   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:32,298   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,299   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,305   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,309   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,313   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,316   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,320   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,324   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,329   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,333   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,337   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,341   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,350   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,354   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,361   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,367   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,373   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,379   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,384   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,389   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,394   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,398   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,401   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,405   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:32,407   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,408   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,416   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,421   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,426   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,431   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,436   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,441   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,446   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,450   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,455   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,460   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,478   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,484   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,494   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,505   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,515   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,527   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,537   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,549   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,559   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,565   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,568   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,575   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:32,577   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,578   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,581   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,585   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,588   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,591   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,594   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,596   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,599   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,602   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,605   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,609   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,612   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,616   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,619   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,622   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,625   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,629   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:32,632   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-10-11T17:59:32,633   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-10-11T17:59:32,635   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,636   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,640   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,644   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,647   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,650   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,654   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,657   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,660   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,664   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,667   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,671   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,675   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,678   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,681   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,684   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,688   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,692   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,695   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,698   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,702   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,706   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,709   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,713   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,716   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:32,718   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,720   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,723   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,727   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,730   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,734   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,737   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,740   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,743   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,747   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,750   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,754   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,759   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,762   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,765   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,768   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,771   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,775   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,778   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,782   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,785   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,789   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,793   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,797   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,800   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:32,803   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:32,804   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:32,809   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:32,814   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:32,819   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:32,823   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:32,825   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:32,832   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:32,837   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,838   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,842   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,845   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,848   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,851   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,854   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,857   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,860   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,863   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,866   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,869   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,873   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,876   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,879   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,882   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,885   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,888   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,891   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,894   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,897   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,899   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,902   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,906   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,909   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,911   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,914   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,917   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,919   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,922   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,925   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,928   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,930   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,934   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,937   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,940   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,943   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,947   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,950   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,954   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:32,957   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,958   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,962   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,967   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,971   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,975   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,978   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,981   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,985   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,988   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,991   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,995   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:32,998   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:33,003   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:33,006   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:33,010   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:33,014   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:33,018   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:33,022   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:33,026   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:33,029   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:33,033   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:33,035   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,037   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,041   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,045   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,048   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,051   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,054   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,058   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,062   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,066   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,069   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,073   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,077   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,081   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,085   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,088   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,092   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,095   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,099   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,103   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,106   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,110   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:33,112   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,113   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,117   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,121   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,126   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,129   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,133   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,136   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,139   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,142   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,145   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,149   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,153   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,157   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,162   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,167   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,171   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,174   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,179   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,183   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,186   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,190   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:33,192   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,193   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,197   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,201   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,204   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,207   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,210   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,213   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,217   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,220   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,223   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,226   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,232   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,234   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,239   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,243   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,247   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,251   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,254   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,258   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,262   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,267   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,269   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,274   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:33,277   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,278   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,285   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,289   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,293   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,298   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,302   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,306   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,311   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,314   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,319   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,322   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,330   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,335   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,341   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,347   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,353   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,359   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,363   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,367   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,371   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,375   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,377   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,381   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:33,383   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,384   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,387   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,390   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,393   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,396   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,399   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,402   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,405   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,407   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,411   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,415   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,419   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,422   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,425   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,428   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,431   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:33,433   creating build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,434   copying SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,438   copying SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,444   copying SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,448   copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,453   copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,455   copying SigProfilerMatrixGenerator/scripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,457   copying SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,461   copying SigProfilerMatrixGenerator/scripts/ref_install.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,463   copying SigProfilerMatrixGenerator/scripts/reference_genome_manager.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,466   copying SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,469   copying SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,471   copying SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,474   copying SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,477   copying SigProfilerMatrixGenerator/scripts/vcfToBedpe.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:33,480   creating build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:33,481   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:33,486   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:33,488   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:33,493   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:33,495   copying SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:33,497   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:33,501   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:33,503   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:33,508   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:33,540   /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-10-11T17:59:33,540   !!

2024-10-11T17:59:33,540           ********************************************************************************
2024-10-11T17:59:33,541           Please avoid running ``setup.py`` directly.
2024-10-11T17:59:33,541           Instead, use pypa/build, pypa/installer or other
2024-10-11T17:59:33,541           standards-based tools.

2024-10-11T17:59:33,541           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-10-11T17:59:33,541           ********************************************************************************

2024-10-11T17:59:33,542   !!
2024-10-11T17:59:33,542     self.initialize_options()
2024-10-11T17:59:33,566   installing to build/bdist.linux-armv7l/wheel
2024-10-11T17:59:33,566   running install
2024-10-11T17:59:33,592   running install_lib
2024-10-11T17:59:33,618   creating build/bdist.linux-armv7l/wheel
2024-10-11T17:59:33,621   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-10-11T17:59:33,622   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references
2024-10-11T17:59:33,624   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes
2024-10-11T17:59:33,626   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-10-11T17:59:33,628   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,630   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,635   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,643   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,653   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,659   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,665   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,673   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,682   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,684   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,689   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,696   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,701   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,710   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,715   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,726   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,734   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,738   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,745   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,750   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,757   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,765   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-10-11T17:59:33,772   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-10-11T17:59:33,773   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-10-11T17:59:33,777   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,778   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,783   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,785   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,798   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,809   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,817   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,828   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,835   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,842   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,850   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,853   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,859   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,869   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,874   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,884   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,893   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,901   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,907   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,913   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,917   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,922   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,933   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,942   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,950   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,957   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-10-11T17:59:33,961   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:33,963   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:33,971   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:33,981   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:33,991   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:34,000   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:34,002   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:34,014   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-10-11T17:59:34,022   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,023   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,026   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,028   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,030   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,033   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,035   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,038   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,040   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,043   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,046   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,049   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,052   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,054   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,057   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,059   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,062   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,064   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-10-11T17:59:34,068   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,070   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,076   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,078   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,084   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,090   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,095   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,102   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,109   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,118   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,128   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,131   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,138   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,152   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,162   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,170   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,175   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,182   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,189   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,193   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,198   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,202   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,207   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,212   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-10-11T17:59:34,218   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,219   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,223   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,225   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,229   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,232   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,235   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,239   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,242   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,248   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,252   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,254   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,258   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,265   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,270   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,275   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,278   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,282   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,286   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,290   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,293   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,296   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,301   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,304   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-10-11T17:59:34,308   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,310   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,313   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,316   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,319   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,323   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,326   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,329   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,333   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,337   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,340   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,343   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,345   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,348   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,350   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,354   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,357   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,359   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,362   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,364   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,367   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,370   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,373   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,376   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,379   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,382   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,385   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,388   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,391   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,393   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,397   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,400   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,403   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,408   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,411   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,414   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,417   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,421   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,423   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,426   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-10-11T17:59:34,429   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-10-11T17:59:34,431   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,432   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,438   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,439   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,452   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,461   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,469   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,478   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,483   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,488   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,495   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,498   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,505   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,520   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,525   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,535   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,547   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,554   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,562   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,570   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,573   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,578   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,584   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,593   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,601   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,609   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-10-11T17:59:34,613   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,614   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,616   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,621   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,627   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,638   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,645   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,651   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,658   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,671   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,673   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,679   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,687   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,694   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,711   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,718   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,731   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,741   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,746   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,754   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,762   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,770   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,778   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-10-11T17:59:34,785   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,787   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,789   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,794   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,802   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,813   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,819   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,824   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,832   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,839   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,842   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,846   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,853   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,858   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,867   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,872   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,890   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,902   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,906   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,914   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,921   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,927   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,936   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-10-11T17:59:34,949   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,951   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,953   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,955   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,958   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,960   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,963   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,966   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,968   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,971   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,973   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,975   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,977   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,980   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,982   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,984   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,986   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:34,990   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,007   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,009   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,011   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,013   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,016   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,019   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,038   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,041   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,043   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,045   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,051   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,053   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,056   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,058   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,059   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,062   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,064   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,075   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,077   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,079   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,081   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,083   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,085   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,091   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,093   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,095   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,097   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,099   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,101   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,103   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,108   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,110   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,129   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,132   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,134   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,136   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,139   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,142   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,144   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,146   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,150   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,153   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,155   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,157   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,160   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,163   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,167   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,169   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,172   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,188   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,191   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,193   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,195   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,197   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,199   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,204   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,220   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,223   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,225   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,228   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,230   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,233   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,241   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,243   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,249   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,255   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,263   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,264   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,266   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,268   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,270   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,272   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,274   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,277   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,283   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,309   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,311   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,323   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,324   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,326   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,329   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,332   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,334   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,336   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,338   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,342   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,345   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,348   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,350   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,352   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,359   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,361   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,363   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,367   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,369   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,371   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,373   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,375   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,377   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,378   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,380   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,383   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,385   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,387   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,396   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,398   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,402   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,405   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,409   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,412   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,414   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,416   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,418   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,427   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,429   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,438   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,440   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,444   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,447   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,449   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,451   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,453   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,455   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,457   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,461   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,462   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,464   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,470   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,477   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,486   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,488   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,498   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,500   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,502   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,508   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,510   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,512   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,514   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,517   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,526   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,529   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,531   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,534   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,540   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,543   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,551   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,557   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,559   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,560   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,562   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,564   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,566   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,567   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,590   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,592   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,594   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,598   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,605   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,623   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,626   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,628   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,630   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,633   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,646   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,648   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,668   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,669   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,673   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,682   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,684   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,687   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,689   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,696   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,701   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,703   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,705   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,710   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,712   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,715   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,717   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,719   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,727   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,729   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,731   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,744   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,747   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,749   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,751   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,753   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,755   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,758   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,761   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,770   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,771   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,773   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,777   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,779   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,781   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,783   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,791   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,798   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,801   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,803   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,805   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,820   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,821   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,824   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,826   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,827   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,829   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,831   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,833   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,843   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,845   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,847   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,852   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,854   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,856   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,858   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,873   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,874   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,897   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,899   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,902   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,903   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,907   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,909   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,910   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,933   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,935   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-10-11T17:59:35,938   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-10-11T17:59:35,940   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-10-11T17:59:35,941   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-10-11T17:59:36,007   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-10-11T17:59:36,009   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-10-11T17:59:36,011   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-10-11T17:59:36,014   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-10-11T17:59:36,017   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-10-11T17:59:36,018   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-10-11T17:59:36,091   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-10-11T17:59:36,093   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-10-11T17:59:36,291   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-10-11T17:59:36,292   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-10-11T17:59:36,298   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-10-11T17:59:36,299   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-10-11T17:59:36,667   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-10-11T17:59:36,669   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-10-11T17:59:36,753   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome
2024-10-11T17:59:36,755   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-10-11T17:59:36,757   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-10-11T17:59:37,008   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-10-11T17:59:37,009   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-10-11T17:59:37,079   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-10-11T17:59:37,081   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-10-11T17:59:37,150   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-10-11T17:59:37,152   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,153   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,155   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,159   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,162   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,165   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,168   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,171   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,174   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,177   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,180   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,182   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,185   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,188   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,191   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,194   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,197   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,200   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,203   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,206   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,209   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,211   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-10-11T17:59:37,216   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,217   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,220   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,222   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,224   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,227   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,231   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,234   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,236   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,239   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,241   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,245   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,248   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,251   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,253   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,256   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,259   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,262   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,265   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,268   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,271   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,274   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,276   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,280   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,282   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-10-11T17:59:37,286   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:37,287   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:37,293   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:37,297   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:37,299   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:37,303   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:37,309   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:37,313   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-10-11T17:59:37,319   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,321   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,323   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,326   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,328   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,330   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,333   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,335   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,337   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,339   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,342   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,344   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,346   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,349   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,351   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,354   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,356   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-10-11T17:59:37,359   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,360   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,362   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,365   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,368   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,372   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,376   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,379   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,382   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,389   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,392   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,395   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,399   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,402   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,405   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,408   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,411   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,414   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,417   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,419   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,421   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,424   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,427   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,429   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-10-11T17:59:37,434   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,435   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,437   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,441   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,443   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,447   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,450   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,453   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,456   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,461   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,465   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,467   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,470   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,473   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,476   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,479   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,482   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,485   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,488   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,490   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,492   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,495   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,498   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,500   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-10-11T17:59:37,504   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,505   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,508   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,510   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,512   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,515   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,517   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,519   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,522   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,524   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,527   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,529   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,532   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,534   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,537   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,540   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,543   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,545   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,548   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,550   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,552   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,555   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,557   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,560   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,562   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,564   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,567   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,569   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,572   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,575   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,578   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,580   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,582   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,584   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,587   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,589   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,591   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,594   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,596   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,599   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-10-11T17:59:37,601   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-10-11T17:59:37,604   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,605   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,608   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,610   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,612   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,615   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,618   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,621   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,624   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,626   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,629   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,633   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,635   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,638   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,641   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,643   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,646   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,649   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,651   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,654   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,657   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,659   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,662   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,665   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,668   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-10-11T17:59:37,671   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,673   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,674   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,678   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,681   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,684   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,687   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,690   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,693   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,696   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,699   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,702   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,705   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,707   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,710   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,713   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,715   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,718   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,721   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,724   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,727   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,729   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-10-11T17:59:37,734   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,735   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,737   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,740   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,743   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,746   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,749   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,752   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,755   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,762   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,765   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,768   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,771   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,774   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,777   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,780   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,783   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,785   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,788   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,791   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,794   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,797   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-10-11T17:59:37,801   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV
2024-10-11T17:59:37,802   copying build/lib/SigProfilerMatrixGenerator/references/SV/.DS_Store -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV
2024-10-11T17:59:37,805   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input
2024-10-11T17:59:37,807   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,809   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,810   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,812   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,815   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,816   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,819   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,822   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,823   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,827   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,829   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,831   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,833   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,834   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,836   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,839   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,842   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,843   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,845   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,847   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,849   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,852   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,853   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,855   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,857   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,860   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,862   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,864   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,867   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,868   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,871   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,872   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,874   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,877   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,878   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,880   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,881   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,883   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,885   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,887   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,889   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,891   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,893   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,896   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,898   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,899   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,902   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,905   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,909   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,911   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,913   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-10-11T17:59:37,917   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,919   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,921   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,924   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,926   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,929   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,931   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,933   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,935   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,938   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,940   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,943   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,945   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,947   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,950   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,953   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,956   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,958   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,961   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,963   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,966   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,968   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,971   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,973   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,977   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,979   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,982   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,984   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,986   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,989   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,991   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,995   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:37,997   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,000   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,001   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,003   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,005   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,007   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,010   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,012   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,014   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,016   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,018   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,021   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,023   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,025   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,027   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,029   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,031   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,033   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,035   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-10-11T17:59:38,037   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input
2024-10-11T17:59:38,040   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,041   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.purple.sv.vcf -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,050   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,051   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.vcf -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,054   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,055   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.vcf -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,057   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,059   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,061   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.vcf -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,063   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,064   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,099   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.vcf -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,134   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,140   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,142   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-10-11T17:59:38,145   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV
2024-10-11T17:59:38,147   copying build/lib/SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV
2024-10-11T17:59:38,149   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_output
2024-10-11T17:59:38,151   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV/example_output
2024-10-11T17:59:38,154   copying build/lib/SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV
2024-10-11T17:59:38,156   copying build/lib/SigProfilerMatrixGenerator/references/CNV/.DS_Store -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV
2024-10-11T17:59:38,159   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2024-10-11T17:59:38,160   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV/example_input
2024-10-11T17:59:38,169   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV/example_input
2024-10-11T17:59:38,186   copying build/lib/SigProfilerMatrixGenerator/test_helpers.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator
2024-10-11T17:59:38,189   copying build/lib/SigProfilerMatrixGenerator/install.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator
2024-10-11T17:59:38,192   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,193   copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,195   copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,198   copying build/lib/SigProfilerMatrixGenerator/scripts/reference_genome_manager.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,200   copying build/lib/SigProfilerMatrixGenerator/scripts/vcfToBedpe.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,202   copying build/lib/SigProfilerMatrixGenerator/scripts/ref_install.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,204   copying build/lib/SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,207   copying build/lib/SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,210   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:38,211   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:38,213   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:38,215   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:38,219   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:38,223   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:38,224   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:38,229   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:38,233   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:38,234   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-10-11T17:59:38,235   copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,237   copying build/lib/SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,240   copying build/lib/SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,243   copying build/lib/SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,246   copying build/lib/SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,251   copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,255   copying build/lib/SigProfilerMatrixGenerator/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-10-11T17:59:38,257   copying build/lib/SigProfilerMatrixGenerator/version.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator
2024-10-11T17:59:38,258   copying build/lib/SigProfilerMatrixGenerator/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator
2024-10-11T17:59:38,260   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/controllers
2024-10-11T17:59:38,261   copying build/lib/SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/controllers
2024-10-11T17:59:38,263   copying build/lib/SigProfilerMatrixGenerator/controllers/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/controllers
2024-10-11T17:59:38,265   running install_egg_info
2024-10-11T17:59:38,297   Copying SigProfilerMatrixGenerator.egg-info to build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator-1.2.30-py3.9.egg-info
2024-10-11T17:59:38,312   running install_scripts
2024-10-11T17:59:38,333   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator-1.2.30.dist-info/WHEEL
2024-10-11T17:59:38,336   creating '/tmp/pip-wheel-_4rfddpn/SigProfilerMatrixGenerator-1.2.30-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-10-11T17:59:38,338   adding 'SigProfilerMatrixGenerator/__init__.py'
2024-10-11T17:59:38,341   adding 'SigProfilerMatrixGenerator/install.py'
2024-10-11T17:59:38,343   adding 'SigProfilerMatrixGenerator/test_helpers.py'
2024-10-11T17:59:38,344   adding 'SigProfilerMatrixGenerator/version.py'
2024-10-11T17:59:38,346   adding 'SigProfilerMatrixGenerator/controllers/__init__.py'
2024-10-11T17:59:38,347   adding 'SigProfilerMatrixGenerator/controllers/cli_controller.py'
2024-10-11T17:59:38,350   adding 'SigProfilerMatrixGenerator/references/CNV/.DS_Store'
2024-10-11T17:59:38,351   adding 'SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv'
2024-10-11T17:59:38,352   adding 'SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt'
2024-10-11T17:59:38,486   adding 'SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv'
2024-10-11T17:59:38,557   adding 'SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv'
2024-10-11T17:59:38,562   adding 'SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv'
2024-10-11T17:59:38,564   adding 'SigProfilerMatrixGenerator/references/SV/.DS_Store'
2024-10-11T17:59:38,566   adding 'SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store'
2024-10-11T17:59:38,572   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,574   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,575   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,576   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,578   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,579   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,580   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,583   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,585   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,588   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,590   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,593   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv'
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2024-10-11T17:59:38,599   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,600   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,601   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,602   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,604   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv'
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2024-10-11T17:59:38,623   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,625   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv'
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2024-10-11T17:59:38,629   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,631   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,632   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv'
2024-10-11T17:59:38,635   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv'
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2024-10-11T17:59:38,669   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv'
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2024-10-11T17:59:38,676   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv'
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2024-10-11T17:59:39,206   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv'
2024-10-11T17:59:39,230   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv'
2024-10-11T17:59:39,231   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv'
2024-10-11T17:59:39,233   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv'
2024-10-11T17:59:39,237   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv'
2024-10-11T17:59:39,241   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv'
2024-10-11T17:59:39,242   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv'
2024-10-11T17:59:39,349   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv'
2024-10-11T17:59:39,452   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv'
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2024-10-11T17:59:39,456   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv'
2024-10-11T17:59:39,457   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv'
2024-10-11T17:59:39,459   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv'
2024-10-11T17:59:39,460   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv'
2024-10-11T17:59:39,462   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv'
2024-10-11T17:59:39,463   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv'
2024-10-11T17:59:39,488   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv'
2024-10-11T17:59:39,511   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv'
2024-10-11T17:59:39,513   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv'
2024-10-11T17:59:39,514   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv'
2024-10-11T17:59:39,519   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv'
2024-10-11T17:59:39,523   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv'
2024-10-11T17:59:39,524   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv'
2024-10-11T17:59:39,630   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv'
2024-10-11T17:59:39,735   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv'
2024-10-11T17:59:39,737   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv'
2024-10-11T17:59:39,739   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv'
2024-10-11T17:59:39,740   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv'
2024-10-11T17:59:39,742   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv'
2024-10-11T17:59:39,743   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv'
2024-10-11T17:59:39,745   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv'
2024-10-11T17:59:39,746   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv'
2024-10-11T17:59:39,769   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv'
2024-10-11T17:59:39,788   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv'
2024-10-11T17:59:39,790   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv'
2024-10-11T17:59:39,791   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv'
2024-10-11T17:59:39,795   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv'
2024-10-11T17:59:39,798   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv'
2024-10-11T17:59:39,800   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv'
2024-10-11T17:59:39,890   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv'
2024-10-11T17:59:39,979   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv'
2024-10-11T17:59:39,981   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv'
2024-10-11T17:59:39,983   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv'
2024-10-11T17:59:39,984   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv'
2024-10-11T17:59:39,986   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv'
2024-10-11T17:59:39,987   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv'
2024-10-11T17:59:39,988   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv'
2024-10-11T17:59:39,990   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv'
2024-10-11T17:59:40,012   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv'
2024-10-11T17:59:40,031   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv'
2024-10-11T17:59:40,033   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv'
2024-10-11T17:59:40,034   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv'
2024-10-11T17:59:40,038   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv'
2024-10-11T17:59:40,042   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv'
2024-10-11T17:59:40,043   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv'
2024-10-11T17:59:40,133   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv'
2024-10-11T17:59:40,221   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv'
2024-10-11T17:59:40,223   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv'
2024-10-11T17:59:40,225   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv'
2024-10-11T17:59:40,227   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv'
2024-10-11T17:59:40,228   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv'
2024-10-11T17:59:40,229   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv'
2024-10-11T17:59:40,231   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv'
2024-10-11T17:59:40,232   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv'
2024-10-11T17:59:40,255   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv'
2024-10-11T17:59:40,276   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv'
2024-10-11T17:59:40,278   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv'
2024-10-11T17:59:40,279   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv'
2024-10-11T17:59:40,282   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv'
2024-10-11T17:59:40,286   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv'
2024-10-11T17:59:40,287   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv'
2024-10-11T17:59:40,383   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv'
2024-10-11T17:59:40,476   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv'
2024-10-11T17:59:40,478   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv'
2024-10-11T17:59:40,480   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv'
2024-10-11T17:59:40,482   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv'
2024-10-11T17:59:40,494   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv'
2024-10-11T17:59:40,497   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv'
2024-10-11T17:59:40,498   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv'
2024-10-11T17:59:40,500   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv'
2024-10-11T17:59:40,501   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv'
2024-10-11T17:59:40,564   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv'
2024-10-11T17:59:40,566   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv'
2024-10-11T17:59:40,567   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv'
2024-10-11T17:59:40,569   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv'
2024-10-11T17:59:40,604   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv'
2024-10-11T17:59:40,640   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv'
2024-10-11T17:59:40,706   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv'
2024-10-11T17:59:40,773   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv'
2024-10-11T17:59:40,777   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv'
2024-10-11T17:59:40,778   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv'
2024-10-11T17:59:40,780   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv'
2024-10-11T17:59:40,781   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv'
2024-10-11T17:59:40,789   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv'
2024-10-11T17:59:40,798   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv'
2024-10-11T17:59:40,813   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv'
2024-10-11T17:59:40,828   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv'
2024-10-11T17:59:40,975   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv'
2024-10-11T17:59:41,121   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv'
2024-10-11T17:59:41,394   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv'
2024-10-11T17:59:41,648   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv'
2024-10-11T17:59:41,656   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv'
2024-10-11T17:59:41,657   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv'
2024-10-11T17:59:41,658   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv'
2024-10-11T17:59:41,659   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv'
2024-10-11T17:59:41,662   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv'
2024-10-11T17:59:41,665   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv'
2024-10-11T17:59:41,668   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv'
2024-10-11T17:59:41,671   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv'
2024-10-11T17:59:41,674   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv'
2024-10-11T17:59:41,677   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv'
2024-10-11T17:59:41,679   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv'
2024-10-11T17:59:41,682   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv'
2024-10-11T17:59:41,684   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv'
2024-10-11T17:59:41,686   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv'
2024-10-11T17:59:41,687   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv'
2024-10-11T17:59:41,689   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv'
2024-10-11T17:59:41,691   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv'
2024-10-11T17:59:41,726   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv'
2024-10-11T17:59:41,794   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv'
2024-10-11T17:59:41,860   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv'
2024-10-11T17:59:41,926   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv'
2024-10-11T17:59:41,930   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv'
2024-10-11T17:59:41,931   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv'
2024-10-11T17:59:41,933   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv'
2024-10-11T17:59:41,934   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv'
2024-10-11T17:59:41,942   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv'
2024-10-11T17:59:41,957   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv'
2024-10-11T17:59:41,973   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv'
2024-10-11T17:59:41,981   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv'
2024-10-11T17:59:42,128   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv'
2024-10-11T17:59:42,277   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv'
2024-10-11T17:59:42,547   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv'
2024-10-11T17:59:42,804   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv'
2024-10-11T17:59:42,812   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv'
2024-10-11T17:59:42,813   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv'
2024-10-11T17:59:42,814   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv'
2024-10-11T17:59:42,816   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv'
2024-10-11T17:59:42,818   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv'
2024-10-11T17:59:42,821   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv'
2024-10-11T17:59:42,825   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv'
2024-10-11T17:59:42,828   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv'
2024-10-11T17:59:42,831   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv'
2024-10-11T17:59:42,833   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv'
2024-10-11T17:59:42,836   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv'
2024-10-11T17:59:42,839   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv'
2024-10-11T17:59:42,840   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv'
2024-10-11T17:59:42,842   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv'
2024-10-11T17:59:42,843   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv'
2024-10-11T17:59:42,845   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv'
2024-10-11T17:59:42,875   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv'
2024-10-11T17:59:42,906   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv'
2024-10-11T17:59:42,962   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv'
2024-10-11T17:59:43,020   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv'
2024-10-11T17:59:43,023   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv'
2024-10-11T17:59:43,024   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv'
2024-10-11T17:59:43,026   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv'
2024-10-11T17:59:43,027   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv'
2024-10-11T17:59:43,034   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv'
2024-10-11T17:59:43,041   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv'
2024-10-11T17:59:43,054   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv'
2024-10-11T17:59:43,062   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv'
2024-10-11T17:59:43,191   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv'
2024-10-11T17:59:43,321   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv'
2024-10-11T17:59:43,557   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv'
2024-10-11T17:59:43,778   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv'
2024-10-11T17:59:43,785   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv'
2024-10-11T17:59:43,786   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv'
2024-10-11T17:59:43,788   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv'
2024-10-11T17:59:43,790   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv'
2024-10-11T17:59:43,792   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv'
2024-10-11T17:59:43,795   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv'
2024-10-11T17:59:43,798   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv'
2024-10-11T17:59:43,800   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv'
2024-10-11T17:59:43,802   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv'
2024-10-11T17:59:43,805   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv'
2024-10-11T17:59:43,807   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv'
2024-10-11T17:59:43,809   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv'
2024-10-11T17:59:43,810   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv'
2024-10-11T17:59:43,811   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv'
2024-10-11T17:59:43,813   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv'
2024-10-11T17:59:43,843   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv'
2024-10-11T17:59:43,875   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv'
2024-10-11T17:59:43,932   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv'
2024-10-11T17:59:43,989   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv'
2024-10-11T17:59:43,992   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv'
2024-10-11T17:59:43,994   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv'
2024-10-11T17:59:43,995   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv'
2024-10-11T17:59:43,997   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv'
2024-10-11T17:59:44,003   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv'
2024-10-11T17:59:44,011   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv'
2024-10-11T17:59:44,023   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv'
2024-10-11T17:59:44,031   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv'
2024-10-11T17:59:44,158   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv'
2024-10-11T17:59:44,286   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv'
2024-10-11T17:59:44,523   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv'
2024-10-11T17:59:44,745   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv'
2024-10-11T17:59:44,752   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv'
2024-10-11T17:59:44,753   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv'
2024-10-11T17:59:44,755   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv'
2024-10-11T17:59:44,756   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv'
2024-10-11T17:59:44,758   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv'
2024-10-11T17:59:44,760   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv'
2024-10-11T17:59:44,763   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv'
2024-10-11T17:59:44,766   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv'
2024-10-11T17:59:44,768   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv'
2024-10-11T17:59:44,771   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv'
2024-10-11T17:59:44,773   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv'
2024-10-11T17:59:44,776   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv'
2024-10-11T17:59:44,777   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv'
2024-10-11T17:59:44,779   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv'
2024-10-11T17:59:44,781   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv'
2024-10-11T17:59:44,782   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv'
2024-10-11T17:59:44,813   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv'
2024-10-11T17:59:44,847   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv'
2024-10-11T17:59:44,881   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv'
2024-10-11T17:59:44,916   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv'
2024-10-11T17:59:44,918   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv'
2024-10-11T17:59:44,919   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv'
2024-10-11T17:59:44,921   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv'
2024-10-11T17:59:44,922   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv'
2024-10-11T17:59:44,929   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv'
2024-10-11T17:59:44,937   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv'
2024-10-11T17:59:44,944   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv'
2024-10-11T17:59:44,952   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv'
2024-10-11T17:59:45,084   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv'
2024-10-11T17:59:45,224   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv'
2024-10-11T17:59:45,366   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv'
2024-10-11T17:59:45,512   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv'
2024-10-11T17:59:45,517   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv'
2024-10-11T17:59:45,518   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv'
2024-10-11T17:59:45,520   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv'
2024-10-11T17:59:45,521   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv'
2024-10-11T17:59:45,524   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv'
2024-10-11T17:59:45,526   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv'
2024-10-11T17:59:45,529   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv'
2024-10-11T17:59:45,531   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv'
2024-10-11T17:59:45,539   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt'
2024-10-11T17:59:45,585   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv'
2024-10-11T17:59:45,593   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv'
2024-10-11T17:59:45,595   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv'
2024-10-11T17:59:45,606   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv'
2024-10-11T17:59:45,776   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv'
2024-10-11T17:59:45,782   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv'
2024-10-11T17:59:45,784   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv'
2024-10-11T17:59:45,787   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv'
2024-10-11T17:59:45,788   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv'
2024-10-11T17:59:45,790   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py'
2024-10-11T17:59:48,609   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list'
2024-10-11T17:59:49,698   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list'
2024-10-11T17:59:51,030   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list'
2024-10-11T17:59:51,949   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list'
2024-10-11T17:59:51,979   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list'
2024-10-11T17:59:51,981   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt'
2024-10-11T17:59:51,983   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv'
2024-10-11T17:59:52,883   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list'
2024-10-11T17:59:53,810   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list'
2024-10-11T17:59:54,740   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list'
2024-10-11T17:59:57,109   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list'
2024-10-11T17:59:57,313   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list'
2024-10-11T17:59:57,319   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py'
2024-10-11T17:59:57,344   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt'
2024-10-11T17:59:57,388   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt'
2024-10-11T17:59:57,431   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt'
2024-10-11T17:59:57,441   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt'
2024-10-11T17:59:57,466   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt'
2024-10-11T17:59:57,488   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt'
2024-10-11T17:59:57,522   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt'
2024-10-11T17:59:57,759   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt'
2024-10-11T17:59:58,074   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt'
2024-10-11T17:59:58,227   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt'
2024-10-11T17:59:58,537   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt'
2024-10-11T17:59:58,579   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt'
2024-10-11T17:59:58,751   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt'
2024-10-11T17:59:59,076   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt'
2024-10-11T17:59:59,365   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt'
2024-10-11T17:59:59,534   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt'
2024-10-11T17:59:59,753   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt'
2024-10-11T17:59:59,788   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt'
2024-10-11T17:59:59,998   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt'
2024-10-11T18:00:00,031   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt'
2024-10-11T18:00:00,057   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt'
2024-10-11T18:00:00,081   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt'
2024-10-11T18:00:00,083   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt'
2024-10-11T18:00:00,118   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt'
2024-10-11T18:00:00,123   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt'
2024-10-11T18:00:00,161   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt'
2024-10-11T18:00:00,221   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt'
2024-10-11T18:00:00,267   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt'
2024-10-11T18:00:00,278   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt'
2024-10-11T18:00:00,303   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt'
2024-10-11T18:00:00,325   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt'
2024-10-11T18:00:00,358   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt'
2024-10-11T18:00:00,401   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt'
2024-10-11T18:00:00,415   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt'
2024-10-11T18:00:00,478   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt'
2024-10-11T18:00:00,541   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt'
2024-10-11T18:00:00,559   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt'
2024-10-11T18:00:00,567   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt'
2024-10-11T18:00:00,582   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt'
2024-10-11T18:00:00,627   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt'
2024-10-11T18:00:00,669   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt'
2024-10-11T18:00:00,697   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt'
2024-10-11T18:00:00,728   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt'
2024-10-11T18:00:00,760   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt'
2024-10-11T18:00:00,793   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt'
2024-10-11T18:00:00,819   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt'
2024-10-11T18:00:00,842   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt'
2024-10-11T18:00:00,845   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt'
2024-10-11T18:00:00,869   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt'
2024-10-11T18:00:00,873   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt'
2024-10-11T18:00:01,117   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt'
2024-10-11T18:00:01,163   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt'
2024-10-11T18:00:01,210   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt'
2024-10-11T18:00:01,250   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt'
2024-10-11T18:00:01,254   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt'
2024-10-11T18:00:01,313   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt'
2024-10-11T18:00:01,350   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt'
2024-10-11T18:00:01,360   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt'
2024-10-11T18:00:01,367   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt'
2024-10-11T18:00:01,373   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt'
2024-10-11T18:00:01,378   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt'
2024-10-11T18:00:01,382   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt'
2024-10-11T18:00:01,387   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt'
2024-10-11T18:00:01,397   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt'
2024-10-11T18:00:01,403   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt'
2024-10-11T18:00:01,412   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt'
2024-10-11T18:00:01,415   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt'
2024-10-11T18:00:01,429   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt'
2024-10-11T18:00:01,440   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt'
2024-10-11T18:00:01,446   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt'
2024-10-11T18:00:01,449   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt'
2024-10-11T18:00:01,453   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt'
2024-10-11T18:00:01,459   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt'
2024-10-11T18:00:01,464   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt'
2024-10-11T18:00:01,470   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt'
2024-10-11T18:00:01,476   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt'
2024-10-11T18:00:01,481   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt'
2024-10-11T18:00:01,483   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt'
2024-10-11T18:00:01,492   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt'
2024-10-11T18:00:01,497   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt'
2024-10-11T18:00:01,500   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt'
2024-10-11T18:00:01,506   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt'
2024-10-11T18:00:01,509   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt'
2024-10-11T18:00:01,512   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt'
2024-10-11T18:00:01,515   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt'
2024-10-11T18:00:01,517   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt'
2024-10-11T18:00:01,520   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt'
2024-10-11T18:00:01,524   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt'
2024-10-11T18:00:01,529   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt'
2024-10-11T18:00:01,536   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt'
2024-10-11T18:00:01,548   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt'
2024-10-11T18:00:01,558   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt'
2024-10-11T18:00:01,567   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt'
2024-10-11T18:00:01,574   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt'
2024-10-11T18:00:01,586   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt'
2024-10-11T18:00:01,596   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt'
2024-10-11T18:00:01,599   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt'
2024-10-11T18:00:01,623   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt'
2024-10-11T18:00:01,659   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt'
2024-10-11T18:00:01,676   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt'
2024-10-11T18:00:01,695   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt'
2024-10-11T18:00:02,211   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt'
2024-10-11T18:00:02,816   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt'
2024-10-11T18:00:03,103   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt'
2024-10-11T18:00:03,340   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt'
2024-10-11T18:00:03,471   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt'
2024-10-11T18:00:03,706   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt'
2024-10-11T18:00:03,897   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt'
2024-10-11T18:00:03,991   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt'
2024-10-11T18:00:04,016   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt'
2024-10-11T18:00:04,047   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt'
2024-10-11T18:00:04,079   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt'
2024-10-11T18:00:04,108   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt'
2024-10-11T18:00:04,157   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt'
2024-10-11T18:00:04,181   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt'
2024-10-11T18:00:04,211   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt'
2024-10-11T18:00:04,214   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt'
2024-10-11T18:00:04,232   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt'
2024-10-11T18:00:04,237   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt'
2024-10-11T18:00:04,261   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt'
2024-10-11T18:00:04,297   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt'
2024-10-11T18:00:04,314   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt'
2024-10-11T18:00:04,333   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt'
2024-10-11T18:00:04,352   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt'
2024-10-11T18:00:04,371   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt'
2024-10-11T18:00:04,390   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt'
2024-10-11T18:00:04,415   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt'
2024-10-11T18:00:04,429   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt'
2024-10-11T18:00:04,445   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt'
2024-10-11T18:00:04,476   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt'
2024-10-11T18:00:04,520   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt'
2024-10-11T18:00:04,545   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt'
2024-10-11T18:00:04,576   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt'
2024-10-11T18:00:04,608   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt'
2024-10-11T18:00:04,637   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt'
2024-10-11T18:00:04,686   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt'
2024-10-11T18:00:04,711   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt'
2024-10-11T18:00:04,742   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt'
2024-10-11T18:00:04,762   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt'
2024-10-11T18:00:04,766   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt'
2024-10-11T18:00:04,795   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt'
2024-10-11T18:00:04,856   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt'
2024-10-11T18:00:04,877   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt'
2024-10-11T18:00:04,897   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt'
2024-10-11T18:00:05,142   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt'
2024-10-11T18:00:05,164   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt'
2024-10-11T18:00:05,186   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt'
2024-10-11T18:00:05,218   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt'
2024-10-11T18:00:05,232   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt'
2024-10-11T18:00:05,250   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt'
2024-10-11T18:00:05,286   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt'
2024-10-11T18:00:05,354   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt'
2024-10-11T18:00:05,390   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt'
2024-10-11T18:00:05,443   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt'
2024-10-11T18:00:05,490   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt'
2024-10-11T18:00:05,527   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt'
2024-10-11T18:00:05,585   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt'
2024-10-11T18:00:05,617   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt'
2024-10-11T18:00:05,649   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt'
2024-10-11T18:00:05,653   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt'
2024-10-11T18:00:05,679   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt'
2024-10-11T18:00:05,682   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt'
2024-10-11T18:00:05,703   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt'
2024-10-11T18:00:05,711   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt'
2024-10-11T18:00:05,720   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt'
2024-10-11T18:00:05,728   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt'
2024-10-11T18:00:05,737   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt'
2024-10-11T18:00:05,746   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt'
2024-10-11T18:00:05,754   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt'
2024-10-11T18:00:05,762   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt'
2024-10-11T18:00:05,768   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt'
2024-10-11T18:00:05,775   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt'
2024-10-11T18:00:05,811   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt'
2024-10-11T18:00:05,821   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt'
2024-10-11T18:00:05,840   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt'
2024-10-11T18:00:05,862   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt'
2024-10-11T18:00:05,881   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt'
2024-10-11T18:00:05,898   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt'
2024-10-11T18:00:05,911   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt'
2024-10-11T18:00:05,929   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt'
2024-10-11T18:00:05,945   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt'
2024-10-11T18:00:05,956   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt'
2024-10-11T18:00:05,958   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt'
2024-10-11T18:00:05,969   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt'
2024-10-11T18:00:05,971   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt'
2024-10-11T18:00:06,005   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt'
2024-10-11T18:00:06,020   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt'
2024-10-11T18:00:06,035   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt'
2024-10-11T18:00:06,123   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt'
2024-10-11T18:00:06,139   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt'
2024-10-11T18:00:06,154   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt'
2024-10-11T18:00:06,168   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt'
2024-10-11T18:00:06,183   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt'
2024-10-11T18:00:06,195   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt'
2024-10-11T18:00:06,207   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt'
2024-10-11T18:00:06,269   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt'
2024-10-11T18:00:06,285   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt'
2024-10-11T18:00:06,318   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt'
2024-10-11T18:00:06,355   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt'
2024-10-11T18:00:06,388   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt'
2024-10-11T18:00:06,418   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt'
2024-10-11T18:00:06,442   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt'
2024-10-11T18:00:06,471   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt'
2024-10-11T18:00:06,498   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt'
2024-10-11T18:00:06,518   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt'
2024-10-11T18:00:06,521   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt'
2024-10-11T18:00:06,541   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt'
2024-10-11T18:00:06,543   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt'
2024-10-11T18:00:06,547   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt'
2024-10-11T18:00:06,551   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt'
2024-10-11T18:00:06,558   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt'
2024-10-11T18:00:06,560   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt'
2024-10-11T18:00:06,562   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt'
2024-10-11T18:00:06,564   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt'
2024-10-11T18:00:06,568   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt'
2024-10-11T18:00:06,573   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt'
2024-10-11T18:00:06,575   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt'
2024-10-11T18:00:06,578   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt'
2024-10-11T18:00:06,583   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt'
2024-10-11T18:00:06,588   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt'
2024-10-11T18:00:06,592   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt'
2024-10-11T18:00:06,596   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt'
2024-10-11T18:00:06,600   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt'
2024-10-11T18:00:06,605   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt'
2024-10-11T18:00:06,609   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt'
2024-10-11T18:00:06,611   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py'
2024-10-11T18:00:06,619   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt'
2024-10-11T18:00:06,631   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt'
2024-10-11T18:00:06,640   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt'
2024-10-11T18:00:06,644   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt'
2024-10-11T18:00:06,649   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt'
2024-10-11T18:00:06,654   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt'
2024-10-11T18:00:06,661   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt'
2024-10-11T18:00:06,671   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt'
2024-10-11T18:00:06,674   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt'
2024-10-11T18:00:06,686   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt'
2024-10-11T18:00:06,708   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt'
2024-10-11T18:00:06,713   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt'
2024-10-11T18:00:06,716   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt'
2024-10-11T18:00:06,720   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt'
2024-10-11T18:00:06,733   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt'
2024-10-11T18:00:06,744   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt'
2024-10-11T18:00:06,751   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt'
2024-10-11T18:00:06,760   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt'
2024-10-11T18:00:06,771   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt'
2024-10-11T18:00:06,781   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt'
2024-10-11T18:00:06,788   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt'
2024-10-11T18:00:06,796   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt'
2024-10-11T18:00:06,804   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt'
2024-10-11T18:00:06,805   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt'
2024-10-11T18:00:06,813   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt'
2024-10-11T18:00:06,825   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt'
2024-10-11T18:00:06,834   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt'
2024-10-11T18:00:06,839   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt'
2024-10-11T18:00:06,844   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt'
2024-10-11T18:00:06,849   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt'
2024-10-11T18:00:06,856   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt'
2024-10-11T18:00:06,866   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt'
2024-10-11T18:00:06,869   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt'
2024-10-11T18:00:06,881   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt'
2024-10-11T18:00:06,903   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt'
2024-10-11T18:00:06,908   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt'
2024-10-11T18:00:06,910   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt'
2024-10-11T18:00:06,914   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt'
2024-10-11T18:00:06,927   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt'
2024-10-11T18:00:06,938   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt'
2024-10-11T18:00:06,945   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt'
2024-10-11T18:00:06,953   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt'
2024-10-11T18:00:06,963   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt'
2024-10-11T18:00:06,971   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt'
2024-10-11T18:00:06,978   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt'
2024-10-11T18:00:06,985   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt'
2024-10-11T18:00:06,994   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt'
2024-10-11T18:00:06,996   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt'
2024-10-11T18:00:07,019   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt'
2024-10-11T18:00:07,051   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt'
2024-10-11T18:00:07,082   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt'
2024-10-11T18:00:07,110   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt'
2024-10-11T18:00:07,112   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt'
2024-10-11T18:00:07,164   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt'
2024-10-11T18:00:07,193   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt'
2024-10-11T18:00:07,201   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt'
2024-10-11T18:00:07,205   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt'
2024-10-11T18:00:07,210   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt'
2024-10-11T18:00:07,214   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt'
2024-10-11T18:00:07,218   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt'
2024-10-11T18:00:07,222   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt'
2024-10-11T18:00:07,226   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt'
2024-10-11T18:00:07,231   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt'
2024-10-11T18:00:07,237   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt'
2024-10-11T18:00:07,240   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt'
2024-10-11T18:00:07,254   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt'
2024-10-11T18:00:07,262   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt'
2024-10-11T18:00:07,267   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt'
2024-10-11T18:00:07,269   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt'
2024-10-11T18:00:07,272   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt'
2024-10-11T18:00:07,276   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt'
2024-10-11T18:00:07,280   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt'
2024-10-11T18:00:07,284   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt'
2024-10-11T18:00:07,289   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt'
2024-10-11T18:00:07,292   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt'
2024-10-11T18:00:07,297   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt'
2024-10-11T18:00:07,303   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt'
2024-10-11T18:00:07,306   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt'
2024-10-11T18:00:07,309   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt'
2024-10-11T18:00:07,314   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt'
2024-10-11T18:00:07,316   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt'
2024-10-11T18:00:07,318   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt'
2024-10-11T18:00:07,321   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt'
2024-10-11T18:00:07,323   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt'
2024-10-11T18:00:07,325   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt'
2024-10-11T18:00:07,328   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt'
2024-10-11T18:00:07,332   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt'
2024-10-11T18:00:07,337   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt'
2024-10-11T18:00:07,345   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt'
2024-10-11T18:00:07,353   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt'
2024-10-11T18:00:07,359   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt'
2024-10-11T18:00:07,364   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt'
2024-10-11T18:00:07,373   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt'
2024-10-11T18:00:07,381   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt'
2024-10-11T18:00:07,391   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt'
2024-10-11T18:00:07,406   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt'
2024-10-11T18:00:07,412   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt'
2024-10-11T18:00:07,419   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt'
2024-10-11T18:00:07,427   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt'
2024-10-11T18:00:07,434   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt'
2024-10-11T18:00:07,440   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt'
2024-10-11T18:00:07,449   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt'
2024-10-11T18:00:07,453   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt'
2024-10-11T18:00:07,459   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt'
2024-10-11T18:00:07,471   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt'
2024-10-11T18:00:07,491   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt'
2024-10-11T18:00:07,500   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt'
2024-10-11T18:00:07,515   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt'
2024-10-11T18:00:07,528   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt'
2024-10-11T18:00:07,538   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt'
2024-10-11T18:00:07,559   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt'
2024-10-11T18:00:07,569   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt'
2024-10-11T18:00:07,581   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt'
2024-10-11T18:00:07,590   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt'
2024-10-11T18:00:07,593   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt'
2024-10-11T18:00:07,602   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt'
2024-10-11T18:00:07,618   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt'
2024-10-11T18:00:07,624   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt'
2024-10-11T18:00:07,631   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt'
2024-10-11T18:00:07,638   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt'
2024-10-11T18:00:07,645   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt'
2024-10-11T18:00:07,650   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt'
2024-10-11T18:00:07,659   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt'
2024-10-11T18:00:07,663   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt'
2024-10-11T18:00:07,669   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt'
2024-10-11T18:00:07,681   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt'
2024-10-11T18:00:07,701   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt'
2024-10-11T18:00:07,711   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt'
2024-10-11T18:00:07,725   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt'
2024-10-11T18:00:07,738   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt'
2024-10-11T18:00:07,749   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt'
2024-10-11T18:00:07,770   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt'
2024-10-11T18:00:07,780   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt'
2024-10-11T18:00:07,792   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt'
2024-10-11T18:00:07,800   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt'
2024-10-11T18:00:07,803   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt'
2024-10-11T18:00:07,812   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt'
2024-10-11T18:00:07,828   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt'
2024-10-11T18:00:07,834   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt'
2024-10-11T18:00:07,842   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt'
2024-10-11T18:00:07,849   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt'
2024-10-11T18:00:07,856   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt'
2024-10-11T18:00:07,861   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt'
2024-10-11T18:00:07,871   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt'
2024-10-11T18:00:07,875   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt'
2024-10-11T18:00:07,881   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt'
2024-10-11T18:00:07,893   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt'
2024-10-11T18:00:07,913   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt'
2024-10-11T18:00:07,924   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt'
2024-10-11T18:00:07,938   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt'
2024-10-11T18:00:07,952   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt'
2024-10-11T18:00:07,963   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt'
2024-10-11T18:00:07,985   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt'
2024-10-11T18:00:07,995   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt'
2024-10-11T18:00:08,007   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt'
2024-10-11T18:00:08,015   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt'
2024-10-11T18:00:08,017   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt'
2024-10-11T18:00:08,034   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt'
2024-10-11T18:00:08,039   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt'
2024-10-11T18:00:08,044   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt'
2024-10-11T18:00:08,049   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt'
2024-10-11T18:00:08,054   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt'
2024-10-11T18:00:08,060   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt'
2024-10-11T18:00:08,065   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt'
2024-10-11T18:00:08,070   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt'
2024-10-11T18:00:08,074   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt'
2024-10-11T18:00:08,079   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt'
2024-10-11T18:00:08,112   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt'
2024-10-11T18:00:08,118   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt'
2024-10-11T18:00:08,132   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt'
2024-10-11T18:00:08,152   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt'
2024-10-11T18:00:08,166   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt'
2024-10-11T18:00:08,181   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt'
2024-10-11T18:00:08,190   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt'
2024-10-11T18:00:08,203   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt'
2024-10-11T18:00:08,215   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt'
2024-10-11T18:00:08,223   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt'
2024-10-11T18:00:08,225   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt'
2024-10-11T18:00:08,233   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt'
2024-10-11T18:00:08,235   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt'
2024-10-11T18:00:08,254   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt'
2024-10-11T18:00:08,261   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt'
2024-10-11T18:00:08,269   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt'
2024-10-11T18:00:08,277   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt'
2024-10-11T18:00:08,285   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt'
2024-10-11T18:00:08,293   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt'
2024-10-11T18:00:08,300   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt'
2024-10-11T18:00:08,307   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt'
2024-10-11T18:00:08,313   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt'
2024-10-11T18:00:08,319   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt'
2024-10-11T18:00:08,362   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt'
2024-10-11T18:00:08,371   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt'
2024-10-11T18:00:08,392   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt'
2024-10-11T18:00:08,417   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt'
2024-10-11T18:00:08,440   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt'
2024-10-11T18:00:08,460   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt'
2024-10-11T18:00:08,476   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt'
2024-10-11T18:00:08,495   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt'
2024-10-11T18:00:08,512   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt'
2024-10-11T18:00:08,522   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt'
2024-10-11T18:00:08,524   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt'
2024-10-11T18:00:08,536   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt'
2024-10-11T18:00:08,538   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt'
2024-10-11T18:00:08,541   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt'
2024-10-11T18:00:08,544   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt'
2024-10-11T18:00:08,550   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt'
2024-10-11T18:00:08,553   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt'
2024-10-11T18:00:08,555   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt'
2024-10-11T18:00:08,557   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt'
2024-10-11T18:00:08,561   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt'
2024-10-11T18:00:08,563   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt'
2024-10-11T18:00:08,566   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt'
2024-10-11T18:00:08,569   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt'
2024-10-11T18:00:08,573   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt'
2024-10-11T18:00:08,577   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt'
2024-10-11T18:00:08,579   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt'
2024-10-11T18:00:08,583   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt'
2024-10-11T18:00:08,587   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt'
2024-10-11T18:00:08,591   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt'
2024-10-11T18:00:08,594   adding 'SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py'
2024-10-11T18:00:08,606   adding 'SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py'
2024-10-11T18:00:08,612   adding 'SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py'
2024-10-11T18:00:08,617   adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py'
2024-10-11T18:00:08,619   adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py'
2024-10-11T18:00:08,620   adding 'SigProfilerMatrixGenerator/scripts/__init__.py'
2024-10-11T18:00:08,623   adding 'SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py'
2024-10-11T18:00:08,625   adding 'SigProfilerMatrixGenerator/scripts/ref_install.py'
2024-10-11T18:00:08,628   adding 'SigProfilerMatrixGenerator/scripts/reference_genome_manager.py'
2024-10-11T18:00:08,630   adding 'SigProfilerMatrixGenerator/scripts/save_chrom_strings.py'
2024-10-11T18:00:08,632   adding 'SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py'
2024-10-11T18:00:08,635   adding 'SigProfilerMatrixGenerator/scripts/save_context_distribution.py'
2024-10-11T18:00:08,638   adding 'SigProfilerMatrixGenerator/scripts/save_tsb_192.py'
2024-10-11T18:00:08,640   adding 'SigProfilerMatrixGenerator/scripts/vcfToBedpe.py'
2024-10-11T18:00:08,660   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt'
2024-10-11T18:00:08,662   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt'
2024-10-11T18:00:08,682   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt'
2024-10-11T18:00:08,684   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt'
2024-10-11T18:00:08,686   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py'
2024-10-11T18:00:08,707   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt'
2024-10-11T18:00:08,710   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt'
2024-10-11T18:00:08,731   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt'
2024-10-11T18:00:08,734   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt'
2024-10-11T18:00:08,736   adding 'SigProfilerMatrixGenerator-1.2.30.dist-info/LICENSE'
2024-10-11T18:00:08,738   adding 'SigProfilerMatrixGenerator-1.2.30.dist-info/METADATA'
2024-10-11T18:00:08,739   adding 'SigProfilerMatrixGenerator-1.2.30.dist-info/WHEEL'
2024-10-11T18:00:08,740   adding 'SigProfilerMatrixGenerator-1.2.30.dist-info/entry_points.txt'
2024-10-11T18:00:08,742   adding 'SigProfilerMatrixGenerator-1.2.30.dist-info/top_level.txt'
2024-10-11T18:00:08,758   adding 'SigProfilerMatrixGenerator-1.2.30.dist-info/RECORD'
2024-10-11T18:00:09,442   removing build/bdist.linux-armv7l/wheel
2024-10-11T18:00:09,888   Building wheel for sigprofilermatrixgenerator (setup.py): finished with status 'done'
2024-10-11T18:00:10,299   Created wheel for sigprofilermatrixgenerator: filename=SigProfilerMatrixGenerator-1.2.30-py3-none-any.whl size=41323239 sha256=3ab6aec469fbebe0532a6278f29090bd7c48b05d811b3b451fa85752bd319b46
2024-10-11T18:00:10,300   Stored in directory: /tmp/pip-ephem-wheel-cache-gtgq6ie8/wheels/4f/f4/62/c2f3af1284b5720c34d9bc3581be88d37435ccf6af608ec393
2024-10-11T18:00:10,360 Successfully built sigprofilermatrixgenerator
2024-10-11T18:00:12,408 Removed build tracker: '/tmp/pip-build-tracker-4l6vd39w'