2024-11-02T23:46:29,202 Created temporary directory: /tmp/pip-build-tracker-egbmv9p1
2024-11-02T23:46:29,203 Initialized build tracking at /tmp/pip-build-tracker-egbmv9p1
2024-11-02T23:46:29,203 Created build tracker: /tmp/pip-build-tracker-egbmv9p1
2024-11-02T23:46:29,204 Entered build tracker: /tmp/pip-build-tracker-egbmv9p1
2024-11-02T23:46:29,205 Created temporary directory: /tmp/pip-wheel-4q2fn1se
2024-11-02T23:46:29,209 Created temporary directory: /tmp/pip-ephem-wheel-cache-utkj6x1u
2024-11-02T23:46:29,252 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-11-02T23:46:29,255 2 location(s) to search for versions of pub-worm:
2024-11-02T23:46:29,255 * https://pypi.org/simple/pub-worm/
2024-11-02T23:46:29,255 * https://www.piwheels.org/simple/pub-worm/
2024-11-02T23:46:29,256 Fetching project page and analyzing links: https://pypi.org/simple/pub-worm/
2024-11-02T23:46:29,257 Getting page https://pypi.org/simple/pub-worm/
2024-11-02T23:46:29,258 Found index url https://pypi.org/simple/
2024-11-02T23:46:29,478 Fetched page https://pypi.org/simple/pub-worm/ as application/vnd.pypi.simple.v1+json
2024-11-02T23:46:29,484   Found link https://files.pythonhosted.org/packages/b8/f0/9bb3afc5b9c0aba5ffc3e0530f85826c7d472bd722f814015247c340fb9f/pub_worm-0.0.1.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.0.1
2024-11-02T23:46:29,485   Found link https://files.pythonhosted.org/packages/d8/da/df592d4da97e43ba80b8d21977686643e2fe53863198e8636d52f8385c43/pub_worm-0.1.1.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.1
2024-11-02T23:46:29,486   Found link https://files.pythonhosted.org/packages/6f/b8/c578681405080946ef981f7d8ffca920a824488067c8d71585d3ed6a579d/pub_worm-0.1.2.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.2
2024-11-02T23:46:29,486   Found link https://files.pythonhosted.org/packages/95/ea/f0d51e75f6a6bc592da883218d988cf193bf319166fa473a9b9b88e8d264/pub_worm-0.1.3.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.3
2024-11-02T23:46:29,487   Found link https://files.pythonhosted.org/packages/75/a9/79c8f5eedf2bb7efb9da2d0fe145f73a38f517eb8598c34ee7c96cde0708/pub_worm-0.1.4.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.4
2024-11-02T23:46:29,488   Found link https://files.pythonhosted.org/packages/49/b1/562faa427fd1ff40c449f87cda75c7c1df17d70bb5190dd9acaa36d175b1/pub_worm-0.1.5.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.5
2024-11-02T23:46:29,488   Found link https://files.pythonhosted.org/packages/80/a0/1ce94f51ef16d83a09dea4f1985b068452c7880801597bd3eb82efd056fc/pub_worm-0.1.6.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.6
2024-11-02T23:46:29,489   Found link https://files.pythonhosted.org/packages/a3/21/a1cd9d1377b513ca7bb426346eb849aa4c84f3b3a3e1d80c0c7b05585d92/pub_worm-0.1.7.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.7
2024-11-02T23:46:29,490   Found link https://files.pythonhosted.org/packages/8f/fc/a0c2da18b286317e2843459c01336317cfeaa46efe28b278201968d1176d/pub_worm-0.1.8.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.8
2024-11-02T23:46:29,490   Found link https://files.pythonhosted.org/packages/05/8b/338f3714f1fa9c96e6eb4161453ee1686e7e852c3e568f53de43d9181cba/pub_worm-0.1.9.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.9
2024-11-02T23:46:29,491   Found link https://files.pythonhosted.org/packages/97/77/c5713bb989282f6cc978673a6444be453c991049862f200a583aae8061de/pub_worm-0.2.0.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.0
2024-11-02T23:46:29,492   Found link https://files.pythonhosted.org/packages/ba/54/2d9a593a5d99fea472983a809a8764698e89d7e9336eb4dece805bb685d1/pub_worm-0.2.1.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.1
2024-11-02T23:46:29,492   Found link https://files.pythonhosted.org/packages/da/24/bc0ded99393b36c2a10169df8df556b1ffa4efbcb6cc88c6d0d1245a4490/pub_worm-0.2.2.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.2
2024-11-02T23:46:29,493   Found link https://files.pythonhosted.org/packages/33/30/9561212f51f111d9449c44d81a0be28a5cf0c3b0b074539017aaf0d3630c/pub_worm-0.2.3.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.3
2024-11-02T23:46:29,494   Found link https://files.pythonhosted.org/packages/6c/a1/cf793b17a67838982ea4ec3ad482fcb8a43a35ccf82d0ac3271755dd778c/pub_worm-0.2.4.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.4
2024-11-02T23:46:29,494   Found link https://files.pythonhosted.org/packages/43/11/631571482818adc400afa644ca4fb69ab1c3380d266d34f0112877514a49/pub_worm-0.2.5.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.5
2024-11-02T23:46:29,495   Found link https://files.pythonhosted.org/packages/7d/07/f0b969d2ecfe9daa5682c4565ed168d28aa1e45dff044a102bdb549c2cba/pub_worm-0.2.6.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.6
2024-11-02T23:46:29,495   Found link https://files.pythonhosted.org/packages/f5/e4/6c2a317ea14ff7acce17ad7087f4937e860cb48d28976812e19191e544e5/pub_worm-0.2.7.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.7
2024-11-02T23:46:29,496   Found link https://files.pythonhosted.org/packages/51/40/51943d1557acd97d0bd3c5e4ea9131e52649895cce775d41150299780858/pub_worm-0.2.8.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.8
2024-11-02T23:46:29,497   Found link https://files.pythonhosted.org/packages/96/9b/59b37b2341e80821c39f248138f73e554aa06b6ab437d44aca25ec803725/pub_worm-0.2.9.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.9
2024-11-02T23:46:29,497   Found link https://files.pythonhosted.org/packages/6a/ca/c5f05833b54c4ddb2b8d70e1c3e9631b195d28c7dc92cfbbd22d539d9f0e/pub_worm-0.3.0.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.3.0
2024-11-02T23:46:29,498   Found link https://files.pythonhosted.org/packages/85/d9/83a18281c7792db68fb6f9af515e5a50b5235c2d9816586d522060be97a7/pub_worm-0.3.1.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.3.1
2024-11-02T23:46:29,498   Found link https://files.pythonhosted.org/packages/d6/ea/750af1e220e8ea7ca825e574c5f8485c82cebc05826882f736e492d11d4a/pub_worm-0.3.2.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.3.2
2024-11-02T23:46:29,499   Found link https://files.pythonhosted.org/packages/8a/b9/75cdcce68e88b56c29aacadd8cc4229c649b54f1e2ec77582527997599ce/pub_worm-0.3.3.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.3.3
2024-11-02T23:46:29,500   Found link https://files.pythonhosted.org/packages/4e/3c/d7b15b0ca8d9ef436dd08e08a40d7b1e039c3a9e786a5e9dfa8101d02dd7/pub_worm-0.3.4.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.3.4
2024-11-02T23:46:29,501   Found link https://files.pythonhosted.org/packages/a0/0f/b34482f11648e05a16204f290f64ff41a798e896121355059e8b5f039c47/pub_worm-0.3.5.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.3.5
2024-11-02T23:46:29,501   Found link https://files.pythonhosted.org/packages/53/5c/99090a17cc43030da42e4951e37a6b81a1ea98a54f4b7e12db9e4a35c6f2/pub_worm-0.3.6.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.3.6
2024-11-02T23:46:29,502 Fetching project page and analyzing links: https://www.piwheels.org/simple/pub-worm/
2024-11-02T23:46:29,503 Getting page https://www.piwheels.org/simple/pub-worm/
2024-11-02T23:46:29,504 Found index url https://www.piwheels.org/simple/
2024-11-02T23:46:29,666 Fetched page https://www.piwheels.org/simple/pub-worm/ as text/html
2024-11-02T23:46:29,673   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.3.3-py3-none-any.whl#sha256=da0d3ca0a782da9c6b12ec10ee6368664cb5c3c4fb652d55ac5ea0de063f95c0 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,674   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.3.2-py3-none-any.whl#sha256=8eb0af1a82d51754cf91c35469d2c0e3a47cee05f6570bd5c1fa918b9b457830 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,674   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.3.1-py3-none-any.whl#sha256=99d9dcd7ed7ebda453e569930ae75ceab3b9c7c8eeee77028acdd9c83809f0f3 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,675   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.3.0-py3-none-any.whl#sha256=25de0e60cf04e1f2361dafa06cd0ccc77faf62f68e246eb8e83301e354d9150a (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,676   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.9-py3-none-any.whl#sha256=0b5f756b21fa4c17fbed60801bd4dbc1fc1952ed843281a527c88d757d65485b (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,676   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.8-py3-none-any.whl#sha256=e38f0cefa270a92d5580a1df80252ec5a567937089f35923ee2f8fbaa4bab037 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,676   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.7-py3-none-any.whl#sha256=17c8216479e7796ddea333f1eccbc02c3362a728668da69bbf9e12b0239a9c8f (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,677   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.6-py3-none-any.whl#sha256=79f23813bcf27f437dd33b20d97761a1124ac1aa5aa80ff78557d4a6d78d0ff4 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,677   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.5-py3-none-any.whl#sha256=6372364213ad9038155851d20d7145b7fa44b8664abf2d718da4c2377fc3b56e (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,678   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.4-py3-none-any.whl#sha256=d426fb6e260eb1588f75b25281a6d726d740a9c88f34e8ffd0f0bbcd1e98acbc (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,678   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.3-py3-none-any.whl#sha256=08bbce548fac3ce388fa51fdcbf0a4b59a27180b5871a37d0bf5ced9c84e903a (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,679   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.2-py3-none-any.whl#sha256=1f5f09a3598f66e5a30431d4c93cd6b581049d7829a791820ecb783ddad91c19 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,679   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.1-py3-none-any.whl#sha256=2cd541418ccbf9158ab7e18b187c7d7bc297928fbb5f4817f84f67552fd20c2a (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,680   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.0-py3-none-any.whl#sha256=0fe4aa97fb602755d99717699395e7014f676d4ee4572930652a00f5b0407400 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,680   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.9-py3-none-any.whl#sha256=d36153a6672446b80a3ad4a128123f60f80f8f1444122936363fa80165d19f7a (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,681   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.8-py3-none-any.whl#sha256=ad3c0117baeaa8c04f86149fa0dd71f6ea65d60213da6d6b570d0157572afe2c (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,681   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.7-py3-none-any.whl#sha256=5b88eaacc4effbdf9cc173c4732a2ac60eac0a420ccac19ba626a2be72b7f12a (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,682   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.6-py3-none-any.whl#sha256=b18fb87705630077e0c3647f52c14b61e3b0ced91b1628a96bd5406c384f38ea (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,683   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.5-py3-none-any.whl#sha256=194f3e97c1023b9ba1e3ada69ff1de5c0883d9bf2e6c11d2b6173cf86f7d23ec (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,683   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.4-py3-none-any.whl#sha256=84de546e9b8e73c3cdbccb497a05d28c60537eda48d1b1fdb879be94e3fe3f27 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,684   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.3-py3-none-any.whl#sha256=c93d251f88dea0862a7a5878ea9d242ca2a3dfc38922c876268f91def0e576c1 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,684   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.2-py3-none-any.whl#sha256=414b783788f7426c998a30debf92f860ff421126db3b85415eedd560336e1cbb (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,684   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.1-py3-none-any.whl#sha256=dc4fcd02bf9ebdf2ea21f21ce51753823c46f53bdf7ad2cc731b344c105df198 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,685   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.0.1-py3-none-any.whl#sha256=64fc08fd5ed29b5a07f1941f7d146f1e984af13e0587f87fc5f8c4c194bd7330 (from https://www.piwheels.org/simple/pub-worm/)
2024-11-02T23:46:29,685 Skipping link: not a file: https://www.piwheels.org/simple/pub-worm/
2024-11-02T23:46:29,686 Skipping link: not a file: https://pypi.org/simple/pub-worm/
2024-11-02T23:46:29,706 Given no hashes to check 1 links for project 'pub-worm': discarding no candidates
2024-11-02T23:46:29,709 Collecting pub-worm==0.3.4
2024-11-02T23:46:29,711   Created temporary directory: /tmp/pip-unpack-uqm20g34
2024-11-02T23:46:29,932   Downloading pub_worm-0.3.4.tar.gz (397 kB)
2024-11-02T23:46:30,130   Added pub-worm==0.3.4 from https://files.pythonhosted.org/packages/4e/3c/d7b15b0ca8d9ef436dd08e08a40d7b1e039c3a9e786a5e9dfa8101d02dd7/pub_worm-0.3.4.tar.gz to build tracker '/tmp/pip-build-tracker-egbmv9p1'
2024-11-02T23:46:30,132   Running setup.py (path:/tmp/pip-wheel-4q2fn1se/pub-worm_e398652c44d640faabf3bd467e99c5b6/setup.py) egg_info for package pub-worm
2024-11-02T23:46:30,133   Created temporary directory: /tmp/pip-pip-egg-info-cy8ex88k
2024-11-02T23:46:30,134   Preparing metadata (setup.py): started
2024-11-02T23:46:30,135   Running command python setup.py egg_info
2024-11-02T23:46:31,194   running egg_info
2024-11-02T23:46:31,221   creating /tmp/pip-pip-egg-info-cy8ex88k/pub_worm.egg-info
2024-11-02T23:46:31,222   writing /tmp/pip-pip-egg-info-cy8ex88k/pub_worm.egg-info/PKG-INFO
2024-11-02T23:46:31,226   writing dependency_links to /tmp/pip-pip-egg-info-cy8ex88k/pub_worm.egg-info/dependency_links.txt
2024-11-02T23:46:31,227   writing requirements to /tmp/pip-pip-egg-info-cy8ex88k/pub_worm.egg-info/requires.txt
2024-11-02T23:46:31,229   writing top-level names to /tmp/pip-pip-egg-info-cy8ex88k/pub_worm.egg-info/top_level.txt
2024-11-02T23:46:31,230   writing manifest file '/tmp/pip-pip-egg-info-cy8ex88k/pub_worm.egg-info/SOURCES.txt'
2024-11-02T23:46:31,325   reading manifest file '/tmp/pip-pip-egg-info-cy8ex88k/pub_worm.egg-info/SOURCES.txt'
2024-11-02T23:46:31,327   reading manifest template 'MANIFEST.in'
2024-11-02T23:46:31,329   warning: no files found matching 'pub_worm/ncbi/data/ncbi_esummary.json'
2024-11-02T23:46:31,329   warning: no files found matching 'pub_worm/ncbi/data/ncbi_esearch.json'
2024-11-02T23:46:31,330   warning: no files found matching 'pub_worm/ncbi/data/ncbi_efetch.json'
2024-11-02T23:46:31,332   writing manifest file '/tmp/pip-pip-egg-info-cy8ex88k/pub_worm.egg-info/SOURCES.txt'
2024-11-02T23:46:31,441   Preparing metadata (setup.py): finished with status 'done'
2024-11-02T23:46:31,445   Source in /tmp/pip-wheel-4q2fn1se/pub-worm_e398652c44d640faabf3bd467e99c5b6 has version 0.3.4, which satisfies requirement pub-worm==0.3.4 from https://files.pythonhosted.org/packages/4e/3c/d7b15b0ca8d9ef436dd08e08a40d7b1e039c3a9e786a5e9dfa8101d02dd7/pub_worm-0.3.4.tar.gz
2024-11-02T23:46:31,446   Removed pub-worm==0.3.4 from https://files.pythonhosted.org/packages/4e/3c/d7b15b0ca8d9ef436dd08e08a40d7b1e039c3a9e786a5e9dfa8101d02dd7/pub_worm-0.3.4.tar.gz from build tracker '/tmp/pip-build-tracker-egbmv9p1'
2024-11-02T23:46:31,451 Created temporary directory: /tmp/pip-unpack-6g4zlz1q
2024-11-02T23:46:31,452 Created temporary directory: /tmp/pip-unpack-i7gajc2w
2024-11-02T23:46:31,452 Building wheels for collected packages: pub-worm
2024-11-02T23:46:31,456   Created temporary directory: /tmp/pip-wheel-klq01x2k
2024-11-02T23:46:31,456   Building wheel for pub-worm (setup.py): started
2024-11-02T23:46:31,457   Destination directory: /tmp/pip-wheel-klq01x2k
2024-11-02T23:46:31,458   Running command python setup.py bdist_wheel
2024-11-02T23:46:32,454   running bdist_wheel
2024-11-02T23:46:32,582   running build
2024-11-02T23:46:32,583   running build_py
2024-11-02T23:46:32,612   creating build/lib/pub_worm
2024-11-02T23:46:32,614   copying pub_worm/__init__.py -> build/lib/pub_worm
2024-11-02T23:46:32,616   creating build/lib/tests
2024-11-02T23:46:32,617   copying tests/__init__.py -> build/lib/tests
2024-11-02T23:46:32,620   creating build/lib/pub_worm/biorxiv
2024-11-02T23:46:32,621   copying pub_worm/biorxiv/__init__.py -> build/lib/pub_worm/biorxiv
2024-11-02T23:46:32,622   copying pub_worm/biorxiv/biorxiv_api.py -> build/lib/pub_worm/biorxiv
2024-11-02T23:46:32,625   creating build/lib/pub_worm/impact_factor
2024-11-02T23:46:32,626   copying pub_worm/impact_factor/__init__.py -> build/lib/pub_worm/impact_factor
2024-11-02T23:46:32,628   copying pub_worm/impact_factor/impact_factor_lookup.py -> build/lib/pub_worm/impact_factor
2024-11-02T23:46:32,630   creating build/lib/pub_worm/orcid
2024-11-02T23:46:32,631   copying pub_worm/orcid/__init__.py -> build/lib/pub_worm/orcid
2024-11-02T23:46:32,633   copying pub_worm/orcid/orcid_api.py -> build/lib/pub_worm/orcid
2024-11-02T23:46:32,635   creating build/lib/pub_worm/wormbase
2024-11-02T23:46:32,636   copying pub_worm/wormbase/to_csv_helpers.py -> build/lib/pub_worm/wormbase
2024-11-02T23:46:32,638   copying pub_worm/wormbase/__init__.py -> build/lib/pub_worm/wormbase
2024-11-02T23:46:32,640   copying pub_worm/wormbase/wormbase_util.py -> build/lib/pub_worm/wormbase
2024-11-02T23:46:32,642   copying pub_worm/wormbase/wormbase_api.py -> build/lib/pub_worm/wormbase
2024-11-02T23:46:32,645   creating build/lib/pub_worm/ensembl
2024-11-02T23:46:32,646   copying pub_worm/ensembl/__init__.py -> build/lib/pub_worm/ensembl
2024-11-02T23:46:32,648   copying pub_worm/ensembl/ensembl_api.py -> build/lib/pub_worm/ensembl
2024-11-02T23:46:32,650   creating build/lib/pub_worm/ncbi
2024-11-02T23:46:32,651   copying pub_worm/ncbi/__init__.py -> build/lib/pub_worm/ncbi
2024-11-02T23:46:32,653   copying pub_worm/ncbi/entreze_api.py -> build/lib/pub_worm/ncbi
2024-11-02T23:46:32,656   creating build/lib/tests/impact_factor
2024-11-02T23:46:32,657   copying tests/impact_factor/__init__.py -> build/lib/tests/impact_factor
2024-11-02T23:46:32,659   copying tests/impact_factor/test_get_impact_factor.py -> build/lib/tests/impact_factor
2024-11-02T23:46:32,661   creating build/lib/tests/orcid
2024-11-02T23:46:32,662   copying tests/orcid/__init__.py -> build/lib/tests/orcid
2024-11-02T23:46:32,664   copying tests/orcid/test_orcid_api.py -> build/lib/tests/orcid
2024-11-02T23:46:32,666   creating build/lib/tests/wormbase
2024-11-02T23:46:32,667   copying tests/wormbase/__init__.py -> build/lib/tests/wormbase
2024-11-02T23:46:32,669   copying tests/wormbase/test_wormbase_api.py -> build/lib/tests/wormbase
2024-11-02T23:46:32,671   creating build/lib/tests/ncbi
2024-11-02T23:46:32,672   copying tests/ncbi/__init__.py -> build/lib/tests/ncbi
2024-11-02T23:46:32,674   copying tests/ncbi/test_entreze_api.py -> build/lib/tests/ncbi
2024-11-02T23:46:32,675   running egg_info
2024-11-02T23:46:32,702   writing pub_worm.egg-info/PKG-INFO
2024-11-02T23:46:32,704   writing dependency_links to pub_worm.egg-info/dependency_links.txt
2024-11-02T23:46:32,706   writing requirements to pub_worm.egg-info/requires.txt
2024-11-02T23:46:32,707   writing top-level names to pub_worm.egg-info/top_level.txt
2024-11-02T23:46:32,744   reading manifest file 'pub_worm.egg-info/SOURCES.txt'
2024-11-02T23:46:32,748   reading manifest template 'MANIFEST.in'
2024-11-02T23:46:32,749   warning: no files found matching 'pub_worm/ncbi/data/ncbi_esummary.json'
2024-11-02T23:46:32,749   warning: no files found matching 'pub_worm/ncbi/data/ncbi_esearch.json'
2024-11-02T23:46:32,750   warning: no files found matching 'pub_worm/ncbi/data/ncbi_efetch.json'
2024-11-02T23:46:32,753   writing manifest file 'pub_worm.egg-info/SOURCES.txt'
2024-11-02T23:46:32,755   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'pub_worm.impact_factor.data' is absent from the `packages` configuration.
2024-11-02T23:46:32,756   !!

2024-11-02T23:46:32,757           ********************************************************************************
2024-11-02T23:46:32,758           ############################
2024-11-02T23:46:32,758           # Package would be ignored #
2024-11-02T23:46:32,758           ############################
2024-11-02T23:46:32,759           Python recognizes 'pub_worm.impact_factor.data' as an importable package[^1],
2024-11-02T23:46:32,759           but it is absent from setuptools' `packages` configuration.

2024-11-02T23:46:32,761           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-02T23:46:32,761           package, please make sure that 'pub_worm.impact_factor.data' is explicitly added
2024-11-02T23:46:32,761           to the `packages` configuration field.

2024-11-02T23:46:32,762           Alternatively, you can also rely on setuptools' discovery methods
2024-11-02T23:46:32,763           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-02T23:46:32,764           instead of `find_packages(...)`/`find:`).

2024-11-02T23:46:32,770           You can read more about "package discovery" on setuptools documentation page:

2024-11-02T23:46:32,771           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-02T23:46:32,773           If you don't want 'pub_worm.impact_factor.data' to be distributed and are
2024-11-02T23:46:32,773           already explicitly excluding 'pub_worm.impact_factor.data' via
2024-11-02T23:46:32,774           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-02T23:46:32,775           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-02T23:46:32,775           combination with a more fine grained `package-data` configuration.

2024-11-02T23:46:32,777           You can read more about "package data files" on setuptools documentation page:

2024-11-02T23:46:32,786           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-02T23:46:32,797           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-02T23:46:32,798                 even if it does not contain any `.py` files.
2024-11-02T23:46:32,799                 On the other hand, currently there is no concept of package data
2024-11-02T23:46:32,799                 directory, all directories are treated like packages.
2024-11-02T23:46:32,800           ********************************************************************************

2024-11-02T23:46:32,801   !!
2024-11-02T23:46:32,802     check.warn(importable)
2024-11-02T23:46:32,803   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'pub_worm.wormbase.data' is absent from the `packages` configuration.
2024-11-02T23:46:32,803   !!

2024-11-02T23:46:32,805           ********************************************************************************
2024-11-02T23:46:32,806           ############################
2024-11-02T23:46:32,806           # Package would be ignored #
2024-11-02T23:46:32,807           ############################
2024-11-02T23:46:32,808           Python recognizes 'pub_worm.wormbase.data' as an importable package[^1],
2024-11-02T23:46:32,808           but it is absent from setuptools' `packages` configuration.

2024-11-02T23:46:32,809           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-02T23:46:32,809           package, please make sure that 'pub_worm.wormbase.data' is explicitly added
2024-11-02T23:46:32,810           to the `packages` configuration field.

2024-11-02T23:46:32,811           Alternatively, you can also rely on setuptools' discovery methods
2024-11-02T23:46:32,811           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-02T23:46:32,811           instead of `find_packages(...)`/`find:`).

2024-11-02T23:46:32,812           You can read more about "package discovery" on setuptools documentation page:

2024-11-02T23:46:32,813           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-02T23:46:32,814           If you don't want 'pub_worm.wormbase.data' to be distributed and are
2024-11-02T23:46:32,815           already explicitly excluding 'pub_worm.wormbase.data' via
2024-11-02T23:46:32,815           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-02T23:46:32,816           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-02T23:46:32,816           combination with a more fine grained `package-data` configuration.

2024-11-02T23:46:32,817           You can read more about "package data files" on setuptools documentation page:

2024-11-02T23:46:32,819           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-02T23:46:32,820           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-02T23:46:32,821                 even if it does not contain any `.py` files.
2024-11-02T23:46:32,821                 On the other hand, currently there is no concept of package data
2024-11-02T23:46:32,822                 directory, all directories are treated like packages.
2024-11-02T23:46:32,823           ********************************************************************************

2024-11-02T23:46:32,824   !!
2024-11-02T23:46:32,825     check.warn(importable)
2024-11-02T23:46:32,825   creating build/lib/pub_worm/impact_factor/data
2024-11-02T23:46:32,826   copying pub_worm/impact_factor/data/2022_JCR_IF.csv -> build/lib/pub_worm/impact_factor/data
2024-11-02T23:46:32,826   creating build/lib/pub_worm/wormbase/data
2024-11-02T23:46:32,827   copying pub_worm/wormbase/data/wormbase_field_gene.json -> build/lib/pub_worm/wormbase/data
2024-11-02T23:46:32,828   copying pub_worm/wormbase/data/wormbase_field_paper.json -> build/lib/pub_worm/wormbase/data
2024-11-02T23:46:32,829   copying pub_worm/wormbase/data/wormbase_widget_gene.json -> build/lib/pub_worm/wormbase/data
2024-11-02T23:46:32,847   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-11-02T23:46:32,848   !!

2024-11-02T23:46:32,849           ********************************************************************************
2024-11-02T23:46:32,850           Please avoid running ``setup.py`` directly.
2024-11-02T23:46:32,850           Instead, use pypa/build, pypa/installer or other
2024-11-02T23:46:32,851           standards-based tools.

2024-11-02T23:46:32,852           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-11-02T23:46:32,853           ********************************************************************************

2024-11-02T23:46:32,854   !!
2024-11-02T23:46:32,854     self.initialize_options()
2024-11-02T23:46:32,877   installing to build/bdist.linux-armv7l/wheel
2024-11-02T23:46:32,878   running install
2024-11-02T23:46:32,902   running install_lib
2024-11-02T23:46:32,929   creating build/bdist.linux-armv7l/wheel
2024-11-02T23:46:32,931   creating build/bdist.linux-armv7l/wheel/pub_worm
2024-11-02T23:46:32,933   creating build/bdist.linux-armv7l/wheel/pub_worm/biorxiv
2024-11-02T23:46:32,934   copying build/lib/pub_worm/biorxiv/__init__.py -> build/bdist.linux-armv7l/wheel/./pub_worm/biorxiv
2024-11-02T23:46:32,935   copying build/lib/pub_worm/biorxiv/biorxiv_api.py -> build/bdist.linux-armv7l/wheel/./pub_worm/biorxiv
2024-11-02T23:46:32,938   creating build/bdist.linux-armv7l/wheel/pub_worm/impact_factor
2024-11-02T23:46:32,939   copying build/lib/pub_worm/impact_factor/__init__.py -> build/bdist.linux-armv7l/wheel/./pub_worm/impact_factor
2024-11-02T23:46:32,941   creating build/bdist.linux-armv7l/wheel/pub_worm/impact_factor/data
2024-11-02T23:46:32,942   copying build/lib/pub_worm/impact_factor/data/2022_JCR_IF.csv -> build/bdist.linux-armv7l/wheel/./pub_worm/impact_factor/data
2024-11-02T23:46:32,963   copying build/lib/pub_worm/impact_factor/impact_factor_lookup.py -> build/bdist.linux-armv7l/wheel/./pub_worm/impact_factor
2024-11-02T23:46:32,966   creating build/bdist.linux-armv7l/wheel/pub_worm/orcid
2024-11-02T23:46:32,967   copying build/lib/pub_worm/orcid/__init__.py -> build/bdist.linux-armv7l/wheel/./pub_worm/orcid
2024-11-02T23:46:32,968   copying build/lib/pub_worm/orcid/orcid_api.py -> build/bdist.linux-armv7l/wheel/./pub_worm/orcid
2024-11-02T23:46:32,970   copying build/lib/pub_worm/__init__.py -> build/bdist.linux-armv7l/wheel/./pub_worm
2024-11-02T23:46:32,972   creating build/bdist.linux-armv7l/wheel/pub_worm/wormbase
2024-11-02T23:46:32,973   copying build/lib/pub_worm/wormbase/to_csv_helpers.py -> build/bdist.linux-armv7l/wheel/./pub_worm/wormbase
2024-11-02T23:46:32,975   copying build/lib/pub_worm/wormbase/__init__.py -> build/bdist.linux-armv7l/wheel/./pub_worm/wormbase
2024-11-02T23:46:32,978   creating build/bdist.linux-armv7l/wheel/pub_worm/wormbase/data
2024-11-02T23:46:32,979   copying build/lib/pub_worm/wormbase/data/wormbase_field_paper.json -> build/bdist.linux-armv7l/wheel/./pub_worm/wormbase/data
2024-11-02T23:46:32,981   copying build/lib/pub_worm/wormbase/data/wormbase_widget_gene.json -> build/bdist.linux-armv7l/wheel/./pub_worm/wormbase/data
2024-11-02T23:46:32,982   copying build/lib/pub_worm/wormbase/data/wormbase_field_gene.json -> build/bdist.linux-armv7l/wheel/./pub_worm/wormbase/data
2024-11-02T23:46:32,984   copying build/lib/pub_worm/wormbase/wormbase_util.py -> build/bdist.linux-armv7l/wheel/./pub_worm/wormbase
2024-11-02T23:46:32,986   copying build/lib/pub_worm/wormbase/wormbase_api.py -> build/bdist.linux-armv7l/wheel/./pub_worm/wormbase
2024-11-02T23:46:32,989   creating build/bdist.linux-armv7l/wheel/pub_worm/ensembl
2024-11-02T23:46:32,990   copying build/lib/pub_worm/ensembl/__init__.py -> build/bdist.linux-armv7l/wheel/./pub_worm/ensembl
2024-11-02T23:46:32,992   copying build/lib/pub_worm/ensembl/ensembl_api.py -> build/bdist.linux-armv7l/wheel/./pub_worm/ensembl
2024-11-02T23:46:32,994   creating build/bdist.linux-armv7l/wheel/pub_worm/ncbi
2024-11-02T23:46:32,996   copying build/lib/pub_worm/ncbi/__init__.py -> build/bdist.linux-armv7l/wheel/./pub_worm/ncbi
2024-11-02T23:46:32,997   copying build/lib/pub_worm/ncbi/entreze_api.py -> build/bdist.linux-armv7l/wheel/./pub_worm/ncbi
2024-11-02T23:46:33,001   creating build/bdist.linux-armv7l/wheel/tests
2024-11-02T23:46:33,002   creating build/bdist.linux-armv7l/wheel/tests/impact_factor
2024-11-02T23:46:33,003   copying build/lib/tests/impact_factor/__init__.py -> build/bdist.linux-armv7l/wheel/./tests/impact_factor
2024-11-02T23:46:33,005   copying build/lib/tests/impact_factor/test_get_impact_factor.py -> build/bdist.linux-armv7l/wheel/./tests/impact_factor
2024-11-02T23:46:33,008   creating build/bdist.linux-armv7l/wheel/tests/orcid
2024-11-02T23:46:33,009   copying build/lib/tests/orcid/__init__.py -> build/bdist.linux-armv7l/wheel/./tests/orcid
2024-11-02T23:46:33,011   copying build/lib/tests/orcid/test_orcid_api.py -> build/bdist.linux-armv7l/wheel/./tests/orcid
2024-11-02T23:46:33,013   copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests
2024-11-02T23:46:33,014   creating build/bdist.linux-armv7l/wheel/tests/wormbase
2024-11-02T23:46:33,016   copying build/lib/tests/wormbase/__init__.py -> build/bdist.linux-armv7l/wheel/./tests/wormbase
2024-11-02T23:46:33,017   copying build/lib/tests/wormbase/test_wormbase_api.py -> build/bdist.linux-armv7l/wheel/./tests/wormbase
2024-11-02T23:46:33,019   creating build/bdist.linux-armv7l/wheel/tests/ncbi
2024-11-02T23:46:33,021   copying build/lib/tests/ncbi/__init__.py -> build/bdist.linux-armv7l/wheel/./tests/ncbi
2024-11-02T23:46:33,022   copying build/lib/tests/ncbi/test_entreze_api.py -> build/bdist.linux-armv7l/wheel/./tests/ncbi
2024-11-02T23:46:33,024   running install_egg_info
2024-11-02T23:46:33,057   Copying pub_worm.egg-info to build/bdist.linux-armv7l/wheel/./pub_worm-0.3.4-py3.11.egg-info
2024-11-02T23:46:33,068   running install_scripts
2024-11-02T23:46:33,079   creating build/bdist.linux-armv7l/wheel/pub_worm-0.3.4.dist-info/WHEEL
2024-11-02T23:46:33,082   creating '/tmp/pip-wheel-klq01x2k/pub_worm-0.3.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-11-02T23:46:33,084   adding 'pub_worm/__init__.py'
2024-11-02T23:46:33,086   adding 'pub_worm/biorxiv/__init__.py'
2024-11-02T23:46:33,087   adding 'pub_worm/biorxiv/biorxiv_api.py'
2024-11-02T23:46:33,089   adding 'pub_worm/ensembl/__init__.py'
2024-11-02T23:46:33,090   adding 'pub_worm/ensembl/ensembl_api.py'
2024-11-02T23:46:33,092   adding 'pub_worm/impact_factor/__init__.py'
2024-11-02T23:46:33,093   adding 'pub_worm/impact_factor/impact_factor_lookup.py'
2024-11-02T23:46:33,258   adding 'pub_worm/impact_factor/data/2022_JCR_IF.csv'
2024-11-02T23:46:33,268   adding 'pub_worm/ncbi/__init__.py'
2024-11-02T23:46:33,270   adding 'pub_worm/ncbi/entreze_api.py'
2024-11-02T23:46:33,272   adding 'pub_worm/orcid/__init__.py'
2024-11-02T23:46:33,273   adding 'pub_worm/orcid/orcid_api.py'
2024-11-02T23:46:33,275   adding 'pub_worm/wormbase/__init__.py'
2024-11-02T23:46:33,276   adding 'pub_worm/wormbase/to_csv_helpers.py'
2024-11-02T23:46:33,278   adding 'pub_worm/wormbase/wormbase_api.py'
2024-11-02T23:46:33,280   adding 'pub_worm/wormbase/wormbase_util.py'
2024-11-02T23:46:33,282   adding 'pub_worm/wormbase/data/wormbase_field_gene.json'
2024-11-02T23:46:33,283   adding 'pub_worm/wormbase/data/wormbase_field_paper.json'
2024-11-02T23:46:33,284   adding 'pub_worm/wormbase/data/wormbase_widget_gene.json'
2024-11-02T23:46:33,286   adding 'tests/__init__.py'
2024-11-02T23:46:33,288   adding 'tests/impact_factor/__init__.py'
2024-11-02T23:46:33,289   adding 'tests/impact_factor/test_get_impact_factor.py'
2024-11-02T23:46:33,291   adding 'tests/ncbi/__init__.py'
2024-11-02T23:46:33,292   adding 'tests/ncbi/test_entreze_api.py'
2024-11-02T23:46:33,294   adding 'tests/orcid/__init__.py'
2024-11-02T23:46:33,295   adding 'tests/orcid/test_orcid_api.py'
2024-11-02T23:46:33,296   adding 'tests/wormbase/__init__.py'
2024-11-02T23:46:33,298   adding 'tests/wormbase/test_wormbase_api.py'
2024-11-02T23:46:33,299   adding 'pub_worm-0.3.4.dist-info/METADATA'
2024-11-02T23:46:33,300   adding 'pub_worm-0.3.4.dist-info/WHEEL'
2024-11-02T23:46:33,301   adding 'pub_worm-0.3.4.dist-info/top_level.txt'
2024-11-02T23:46:33,302   adding 'pub_worm-0.3.4.dist-info/RECORD'
2024-11-02T23:46:33,307   removing build/bdist.linux-armv7l/wheel
2024-11-02T23:46:33,430   Building wheel for pub-worm (setup.py): finished with status 'done'
2024-11-02T23:46:33,436   Created wheel for pub-worm: filename=pub_worm-0.3.4-py3-none-any.whl size=402782 sha256=a3e5dd6c0f95799f1970ecd5fb6d76d08bb48ebd70bfce270c908e998d4310c9
2024-11-02T23:46:33,438   Stored in directory: /tmp/pip-ephem-wheel-cache-utkj6x1u/wheels/e9/9e/0b/073023c0ff637091154e88b8cf83f451290ba3041d98bc4000
2024-11-02T23:46:33,448 Successfully built pub-worm
2024-11-02T23:46:33,461 Removed build tracker: '/tmp/pip-build-tracker-egbmv9p1'