2024-11-04T02:24:02,296 Created temporary directory: /tmp/pip-build-tracker-eakwpqby 2024-11-04T02:24:02,297 Initialized build tracking at /tmp/pip-build-tracker-eakwpqby 2024-11-04T02:24:02,298 Created build tracker: /tmp/pip-build-tracker-eakwpqby 2024-11-04T02:24:02,298 Entered build tracker: /tmp/pip-build-tracker-eakwpqby 2024-11-04T02:24:02,299 Created temporary directory: /tmp/pip-wheel-lcqtq7cs 2024-11-04T02:24:02,303 Created temporary directory: /tmp/pip-ephem-wheel-cache-g942gpnj 2024-11-04T02:24:02,346 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-11-04T02:24:02,348 2 location(s) to search for versions of nextflow: 2024-11-04T02:24:02,348 * https://pypi.org/simple/nextflow/ 2024-11-04T02:24:02,348 * https://www.piwheels.org/simple/nextflow/ 2024-11-04T02:24:02,349 Fetching project page and analyzing links: https://pypi.org/simple/nextflow/ 2024-11-04T02:24:02,350 Getting page https://pypi.org/simple/nextflow/ 2024-11-04T02:24:02,351 Found index url https://pypi.org/simple/ 2024-11-04T02:24:02,572 Fetched page https://pypi.org/simple/nextflow/ as application/vnd.pypi.simple.v1+json 2024-11-04T02:24:02,576 Found link https://files.pythonhosted.org/packages/d9/3d/162f93ee2c674b19e07782850b8e1044168c3615a9e3e3a9a2d75ad45e8a/nextflow-22.10.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.1 2024-11-04T02:24:02,577 Found link https://files.pythonhosted.org/packages/0b/00/f6d3c8d84864605147aa79ec17f763fd394f9cfaded672101e3d07bc0345/nextflow-22.10.6.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.6 2024-11-04T02:24:02,577 Found link https://files.pythonhosted.org/packages/f5/e8/e0882a1aad0b30b3ac760ae69914ffe986706f12d6539a1c0a08759d0e2b/nextflow-22.10.7.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.7 2024-11-04T02:24:02,578 Found link https://files.pythonhosted.org/packages/d5/eb/d7cd6b33724ea6c37f8dfd4ed4354a06ed66e8a87bb6c50cca26afa3d210/nextflow-23.4.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.1 2024-11-04T02:24:02,579 Found link https://files.pythonhosted.org/packages/77/eb/6f5e7d09188ac1fedc1b20c5bb3c679302cda22398c49682f8f3213565db/nextflow-23.4.2.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.2 2024-11-04T02:24:02,579 Found link https://files.pythonhosted.org/packages/37/0f/cd4e2d76402ebd60994753df846a4581fe1cd2c5c8ecfad4a0758328edf9/nextflow-23.4.3.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.3 2024-11-04T02:24:02,580 Found link https://files.pythonhosted.org/packages/7f/a1/ef4e714fdc8de1cf27f285565feea47eec4c85b96fc9063a07fe8215ef83/nextflow-23.4.4.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.4 2024-11-04T02:24:02,581 Found link https://files.pythonhosted.org/packages/5d/28/eb02b1a65c49e3b2dffd9d42e711e0544ee9db637cd4ca43b0c1a64e0eb4/nextflow-23.10.0.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.10.0 2024-11-04T02:24:02,581 Found link https://files.pythonhosted.org/packages/83/af/626ea17fa51a5397849f286ffb2c88e661e1498078b337287c8deee86ba6/nextflow-23.10.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.10.1 2024-11-04T02:24:02,582 Found link https://files.pythonhosted.org/packages/c4/9b/9cfb11bf3e9f51644b177c1ef2c635b11e96aedea5a40fd5839d197de7bd/nextflow-24.4.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.1 2024-11-04T02:24:02,583 Found link https://files.pythonhosted.org/packages/e3/bd/c2bbb7c09b5c88d1521f40025c5ddec825b5c789f374242afbffba08c84b/nextflow-24.4.2.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.2 2024-11-04T02:24:02,583 Found link https://files.pythonhosted.org/packages/5d/f7/65b3d0d6efa2d1dc0a74295b0bafac940349fb553ff77aecc2b19341206c/nextflow-24.4.3.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.3 2024-11-04T02:24:02,584 Found link https://files.pythonhosted.org/packages/0e/b6/cecfb82e6f67273377507d12df3bed4ac8ddc31a5761c98ce8ab3edf4454/nextflow-24.4.4.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.4 2024-11-04T02:24:02,585 Found link https://files.pythonhosted.org/packages/29/52/547b169dda8bf4f6586ee7c81cb6a3fd74ac87ec0cf7d1f23afb417103b0/nextflow-24.10.0.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.10.0 2024-11-04T02:24:02,586 Fetching project page and analyzing links: https://www.piwheels.org/simple/nextflow/ 2024-11-04T02:24:02,587 Getting page https://www.piwheels.org/simple/nextflow/ 2024-11-04T02:24:02,588 Found index url https://www.piwheels.org/simple/ 2024-11-04T02:24:02,757 Fetched page https://www.piwheels.org/simple/nextflow/ as text/html 2024-11-04T02:24:02,762 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-24.4.4-py3-none-any.whl#sha256=dd8afff5397e3bd0f6f7bb2f50680177e7b244eb90f9b176391034e9ac648894 (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,763 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-24.4.3-py3-none-any.whl#sha256=939e5cec991c7e0aa855382e5080b22a5a6d4e29ea2fe78489bc82c8efd54618 (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,763 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-24.4.2-py3-none-any.whl#sha256=e7fec3dff6b4f186a445cb5cfc249c17ac0391558a134e26af1ff85c0e55d3ba (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,764 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-24.4.1-py3-none-any.whl#sha256=de56fffc2db65488a1756d1230de2fdf75ce97d44ab44bd42e5dcd0587b13987 (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,764 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.10.1-py3-none-any.whl#sha256=81573f00e62309b377e56977d79c506407a4283adeb34ab3ccf025ee1b840b79 (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,765 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.10.0-py3-none-any.whl#sha256=7d68961906a1c33d39660746da229605ecefc580b066c8458ebebf96e563549d (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,765 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.4-py3-none-any.whl#sha256=07d049d85a7b1f1772982e66a45e970378c1b3e4a0aa11e94bff54eea2facfaf (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,766 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.3-py3-none-any.whl#sha256=1d2114b09aec49a7701bb1480ca7ce83e23acd47cdb495a709384efc2a525948 (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,766 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.2-py3-none-any.whl#sha256=2056f24035f07ee610923e7a8ec19e52b141789365e337ccf71e27a365a68ce6 (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,767 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.1-py3-none-any.whl#sha256=c07e0059e657c9519b9cc0b41d127157c166bf9116bacb750aa5fbf8ef9e9a55 (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,767 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.7-py3-none-any.whl#sha256=bd32f54d735936e85cc14b26070f88d5b86f2fda68079680e58d5dcd6472ecdd (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,768 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.6-py3-none-any.whl#sha256=10d80820a116271df8dd0c21f0373823dbf31f40715ebb305d3b85d49f39ad72 (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,768 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.1-py3-none-any.whl#sha256=746fe26a0a4083913632e05683071cc2fe41d7780835714a38c1d44116ff9073 (from https://www.piwheels.org/simple/nextflow/) 2024-11-04T02:24:02,769 Skipping link: not a file: https://www.piwheels.org/simple/nextflow/ 2024-11-04T02:24:02,770 Skipping link: not a file: https://pypi.org/simple/nextflow/ 2024-11-04T02:24:02,789 Given no hashes to check 1 links for project 'nextflow': discarding no candidates 2024-11-04T02:24:02,791 Collecting nextflow==24.10.0 2024-11-04T02:24:02,793 Created temporary directory: /tmp/pip-unpack-qopvp_bx 2024-11-04T02:24:03,008 Downloading nextflow-24.10.0.tar.gz (7.8 kB) 2024-11-04T02:24:03,033 Added nextflow==24.10.0 from https://files.pythonhosted.org/packages/29/52/547b169dda8bf4f6586ee7c81cb6a3fd74ac87ec0cf7d1f23afb417103b0/nextflow-24.10.0.tar.gz to build tracker '/tmp/pip-build-tracker-eakwpqby' 2024-11-04T02:24:03,035 Running setup.py (path:/tmp/pip-wheel-lcqtq7cs/nextflow_2e611edb9a464ce9b2ff2a45d8d6b30b/setup.py) egg_info for package nextflow 2024-11-04T02:24:03,036 Created temporary directory: /tmp/pip-pip-egg-info-51n_7u04 2024-11-04T02:24:03,036 Preparing metadata (setup.py): started 2024-11-04T02:24:03,038 Running command python setup.py egg_info 2024-11-04T02:24:04,111 running egg_info 2024-11-04T02:24:04,141 creating /tmp/pip-pip-egg-info-51n_7u04/nextflow.egg-info 2024-11-04T02:24:04,142 writing /tmp/pip-pip-egg-info-51n_7u04/nextflow.egg-info/PKG-INFO 2024-11-04T02:24:04,145 writing dependency_links to /tmp/pip-pip-egg-info-51n_7u04/nextflow.egg-info/dependency_links.txt 2024-11-04T02:24:04,147 writing top-level names to /tmp/pip-pip-egg-info-51n_7u04/nextflow.egg-info/top_level.txt 2024-11-04T02:24:04,148 writing manifest file '/tmp/pip-pip-egg-info-51n_7u04/nextflow.egg-info/SOURCES.txt' 2024-11-04T02:24:04,230 reading manifest file '/tmp/pip-pip-egg-info-51n_7u04/nextflow.egg-info/SOURCES.txt' 2024-11-04T02:24:04,233 writing manifest file '/tmp/pip-pip-egg-info-51n_7u04/nextflow.egg-info/SOURCES.txt' 2024-11-04T02:24:04,339 Preparing metadata (setup.py): finished with status 'done' 2024-11-04T02:24:04,343 Source in /tmp/pip-wheel-lcqtq7cs/nextflow_2e611edb9a464ce9b2ff2a45d8d6b30b has version 24.10.0, which satisfies requirement nextflow==24.10.0 from https://files.pythonhosted.org/packages/29/52/547b169dda8bf4f6586ee7c81cb6a3fd74ac87ec0cf7d1f23afb417103b0/nextflow-24.10.0.tar.gz 2024-11-04T02:24:04,344 Removed nextflow==24.10.0 from https://files.pythonhosted.org/packages/29/52/547b169dda8bf4f6586ee7c81cb6a3fd74ac87ec0cf7d1f23afb417103b0/nextflow-24.10.0.tar.gz from build tracker '/tmp/pip-build-tracker-eakwpqby' 2024-11-04T02:24:04,348 Created temporary directory: /tmp/pip-unpack-ql93bu9q 2024-11-04T02:24:04,349 Created temporary directory: /tmp/pip-unpack-58cx5114 2024-11-04T02:24:04,350 Building wheels for collected packages: nextflow 2024-11-04T02:24:04,354 Created temporary directory: /tmp/pip-wheel-h0akr2k9 2024-11-04T02:24:04,355 Building wheel for nextflow (setup.py): started 2024-11-04T02:24:04,356 Destination directory: /tmp/pip-wheel-h0akr2k9 2024-11-04T02:24:04,356 Running command python setup.py bdist_wheel 2024-11-04T02:24:05,405 running bdist_wheel 2024-11-04T02:24:05,538 running build 2024-11-04T02:24:05,539 running build_scripts 2024-11-04T02:24:05,540 creating build/scripts-3.11 2024-11-04T02:24:05,543 copying launcher/nextflow -> build/scripts-3.11 2024-11-04T02:24:05,545 changing mode of build/scripts-3.11/nextflow from 644 to 755 2024-11-04T02:24:05,574 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-11-04T02:24:05,574 !! 2024-11-04T02:24:05,576 ******************************************************************************** 2024-11-04T02:24:05,576 Please avoid running ``setup.py`` directly. 2024-11-04T02:24:05,577 Instead, use pypa/build, pypa/installer or other 2024-11-04T02:24:05,577 standards-based tools. 2024-11-04T02:24:05,579 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-11-04T02:24:05,579 ******************************************************************************** 2024-11-04T02:24:05,581 !! 2024-11-04T02:24:05,581 self.initialize_options() 2024-11-04T02:24:05,604 installing to build/bdist.linux-armv7l/wheel 2024-11-04T02:24:05,605 running install 2024-11-04T02:24:05,630 running install_egg_info 2024-11-04T02:24:05,691 running egg_info 2024-11-04T02:24:05,717 writing nextflow.egg-info/PKG-INFO 2024-11-04T02:24:05,720 writing dependency_links to nextflow.egg-info/dependency_links.txt 2024-11-04T02:24:05,722 writing top-level names to nextflow.egg-info/top_level.txt 2024-11-04T02:24:05,749 reading manifest file 'nextflow.egg-info/SOURCES.txt' 2024-11-04T02:24:05,754 writing manifest file 'nextflow.egg-info/SOURCES.txt' 2024-11-04T02:24:05,756 Copying nextflow.egg-info to build/bdist.linux-armv7l/wheel/./nextflow-24.10.0-py3.11.egg-info 2024-11-04T02:24:05,765 running install_scripts 2024-11-04T02:24:05,766 creating build/bdist.linux-armv7l/wheel/nextflow-24.10.0.data/scripts 2024-11-04T02:24:05,767 copying build/scripts-3.11/nextflow -> build/bdist.linux-armv7l/wheel/nextflow-24.10.0.data/scripts 2024-11-04T02:24:05,770 changing mode of build/bdist.linux-armv7l/wheel/nextflow-24.10.0.data/scripts/nextflow to 755 2024-11-04T02:24:05,780 creating build/bdist.linux-armv7l/wheel/nextflow-24.10.0.dist-info/WHEEL 2024-11-04T02:24:05,782 creating '/tmp/pip-wheel-h0akr2k9/nextflow-24.10.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-11-04T02:24:05,786 adding 'nextflow-24.10.0.data/scripts/nextflow' 2024-11-04T02:24:05,789 adding 'nextflow-24.10.0.dist-info/METADATA' 2024-11-04T02:24:05,790 adding 'nextflow-24.10.0.dist-info/WHEEL' 2024-11-04T02:24:05,791 adding 'nextflow-24.10.0.dist-info/top_level.txt' 2024-11-04T02:24:05,792 adding 'nextflow-24.10.0.dist-info/RECORD' 2024-11-04T02:24:05,798 removing build/bdist.linux-armv7l/wheel 2024-11-04T02:24:05,913 Building wheel for nextflow (setup.py): finished with status 'done' 2024-11-04T02:24:05,916 Created wheel for nextflow: filename=nextflow-24.10.0-py3-none-any.whl size=7926 sha256=fa91a2cbc9ab218f57b3c4e1d37b95d7bf9622251cc2e278a92594c457838317 2024-11-04T02:24:05,917 Stored in directory: /tmp/pip-ephem-wheel-cache-g942gpnj/wheels/27/ee/72/15737c70d191bb863f2ad944a047ebc85f4d0e6ca0a13403bd 2024-11-04T02:24:05,926 Successfully built nextflow 2024-11-04T02:24:05,929 Removed build tracker: '/tmp/pip-build-tracker-eakwpqby'