2024-11-04T09:43:40,933 Created temporary directory: /tmp/pip-build-tracker-yf41q5et 2024-11-04T09:43:40,934 Initialized build tracking at /tmp/pip-build-tracker-yf41q5et 2024-11-04T09:43:40,935 Created build tracker: /tmp/pip-build-tracker-yf41q5et 2024-11-04T09:43:40,935 Entered build tracker: /tmp/pip-build-tracker-yf41q5et 2024-11-04T09:43:40,936 Created temporary directory: /tmp/pip-wheel-yndsjom_ 2024-11-04T09:43:40,940 Created temporary directory: /tmp/pip-ephem-wheel-cache-31fe11e7 2024-11-04T09:43:40,983 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-11-04T09:43:40,986 2 location(s) to search for versions of spci: 2024-11-04T09:43:40,986 * https://pypi.org/simple/spci/ 2024-11-04T09:43:40,986 * https://www.piwheels.org/simple/spci/ 2024-11-04T09:43:40,987 Fetching project page and analyzing links: https://pypi.org/simple/spci/ 2024-11-04T09:43:40,987 Getting page https://pypi.org/simple/spci/ 2024-11-04T09:43:40,989 Found index url https://pypi.org/simple/ 2024-11-04T09:43:41,209 Fetched page https://pypi.org/simple/spci/ as application/vnd.pypi.simple.v1+json 2024-11-04T09:43:41,212 Skipping link: No binaries permitted for spci: https://files.pythonhosted.org/packages/1a/41/32d0d8358817d6906af703026287c106096f9338e724c6b325290f0bbc69/spci-1.1.0-py3-none-any.whl (from https://pypi.org/simple/spci/) (requires-python:>=3.6) 2024-11-04T09:43:41,213 Found link https://files.pythonhosted.org/packages/91/fc/96c4104ed9b23aabbba514fd7434a7c29a0fdd3740f30cb3d8022a5d30b5/spci-1.1.0.tar.gz (from https://pypi.org/simple/spci/) (requires-python:>=3.6), version: 1.1.0 2024-11-04T09:43:41,213 Skipping link: No binaries permitted for spci: https://files.pythonhosted.org/packages/b5/03/d2ffe5eb4420ab13ee16c39f0fefa4ec01b872b837dad736d7efe66c514c/spci-1.1.1-py3-none-any.whl (from https://pypi.org/simple/spci/) (requires-python:>=3.6) 2024-11-04T09:43:41,214 Found link https://files.pythonhosted.org/packages/6e/c5/704cfbf85c8e2870d81431b9c25500e495f9bedcf9565126df3f3a52e870/spci-1.1.1.tar.gz (from https://pypi.org/simple/spci/) (requires-python:>=3.6), version: 1.1.1 2024-11-04T09:43:41,215 Skipping link: No binaries permitted for spci: https://files.pythonhosted.org/packages/12/b0/4931707302555d699a4120861090ff7693b48d00b9071c20790c59395576/spci-1.1.2-py3-none-any.whl (from https://pypi.org/simple/spci/) (requires-python:>=3.6) 2024-11-04T09:43:41,216 Found link https://files.pythonhosted.org/packages/bd/c3/3a234feb5025948f920a75ed9011b549423dfd546f92a3dc77951b590a6d/spci-1.1.2.tar.gz (from https://pypi.org/simple/spci/) (requires-python:>=3.6), version: 1.1.2 2024-11-04T09:43:41,216 Skipping link: No binaries permitted for spci: https://files.pythonhosted.org/packages/f6/65/78d76c8e0297104559312c4880b2bbc461305708f722db1c392e75d0a0d5/spci-1.1.3-py3-none-any.whl (from https://pypi.org/simple/spci/) (requires-python:>=3.6) 2024-11-04T09:43:41,217 Found link https://files.pythonhosted.org/packages/81/17/166f99ea4a929645df3b422dfd80ab7acb407e5176ef1925ed06c7a48cdd/spci-1.1.3.tar.gz (from https://pypi.org/simple/spci/) (requires-python:>=3.6), version: 1.1.3 2024-11-04T09:43:41,218 Skipping link: No binaries permitted for spci: https://files.pythonhosted.org/packages/1f/ac/ab5307425262cd0d66faf403300b8bff2025e3147b06d1e83f9370d23b44/spci-1.1.4-py3-none-any.whl (from https://pypi.org/simple/spci/) (requires-python:>=3.6) 2024-11-04T09:43:41,219 Found link https://files.pythonhosted.org/packages/ce/15/885ebd7b398b7d491ddec994087220fb4e3c529b9f2b3f8412a284e3375a/spci-1.1.4.tar.gz (from https://pypi.org/simple/spci/) (requires-python:>=3.6), version: 1.1.4 2024-11-04T09:43:41,220 Fetching project page and analyzing links: https://www.piwheels.org/simple/spci/ 2024-11-04T09:43:41,220 Getting page https://www.piwheels.org/simple/spci/ 2024-11-04T09:43:41,221 Found index url https://www.piwheels.org/simple/ 2024-11-04T09:43:41,388 Fetched page https://www.piwheels.org/simple/spci/ as text/html 2024-11-04T09:43:41,390 Skipping link: No binaries permitted for spci: https://www.piwheels.org/simple/spci/spci-1.1.3-py3-none-any.whl#sha256=127deacd2c92606c4cb4c25cd6b189ecadfa3aa118890069c4d334ff812257b6 (from https://www.piwheels.org/simple/spci/) (requires-python:>=3.6) 2024-11-04T09:43:41,391 Skipping link: No binaries permitted for spci: https://www.piwheels.org/simple/spci/spci-1.1.2-py3-none-any.whl#sha256=12b5b9199bd5b761c46a92342a7edcf0c6f69355690166f42a3e4aa5bf0761f7 (from https://www.piwheels.org/simple/spci/) (requires-python:>=3.6) 2024-11-04T09:43:41,392 Skipping link: No binaries permitted for spci: https://www.piwheels.org/simple/spci/spci-1.1.1-py3-none-any.whl#sha256=1f5a2d433db3cc13ca66b73815a700db7fe871afcf9107932168dbf8411863c3 (from https://www.piwheels.org/simple/spci/) (requires-python:>=3.6) 2024-11-04T09:43:41,392 Skipping link: No binaries permitted for spci: https://www.piwheels.org/simple/spci/spci-1.1.0-py3-none-any.whl#sha256=657d7b6b114bcf163a18de5d335dce76e68b209c3086afd15180fbc604b77966 (from https://www.piwheels.org/simple/spci/) (requires-python:>=3.6) 2024-11-04T09:43:41,393 Skipping link: not a file: https://www.piwheels.org/simple/spci/ 2024-11-04T09:43:41,393 Skipping link: not a file: https://pypi.org/simple/spci/ 2024-11-04T09:43:41,411 Given no hashes to check 1 links for project 'spci': discarding no candidates 2024-11-04T09:43:41,413 Collecting spci==1.1.4 2024-11-04T09:43:41,415 Created temporary directory: /tmp/pip-unpack-dpcf1q8p 2024-11-04T09:43:41,630 Downloading spci-1.1.4.tar.gz (47 kB) 2024-11-04T09:43:41,741 Added spci==1.1.4 from https://files.pythonhosted.org/packages/ce/15/885ebd7b398b7d491ddec994087220fb4e3c529b9f2b3f8412a284e3375a/spci-1.1.4.tar.gz to build tracker '/tmp/pip-build-tracker-yf41q5et' 2024-11-04T09:43:41,742 Running setup.py (path:/tmp/pip-wheel-yndsjom_/spci_9160ec7f943b4eef97c5f5508e586a86/setup.py) egg_info for package spci 2024-11-04T09:43:41,743 Created temporary directory: /tmp/pip-pip-egg-info-dynko6ai 2024-11-04T09:43:41,744 Preparing metadata (setup.py): started 2024-11-04T09:43:41,745 Running command python setup.py egg_info 2024-11-04T09:43:42,239 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:495: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-11-04T09:43:42,239 !! 2024-11-04T09:43:42,240 ******************************************************************************** 2024-11-04T09:43:42,241 Usage of dash-separated 'description-file' will not be supported in future 2024-11-04T09:43:42,241 versions. Please use the underscore name 'description_file' instead. 2024-11-04T09:43:42,242 By 2025-Mar-03, you need to update your project and remove deprecated calls 2024-11-04T09:43:42,243 or your builds will no longer be supported. 2024-11-04T09:43:42,244 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-11-04T09:43:42,244 ******************************************************************************** 2024-11-04T09:43:42,245 !! 2024-11-04T09:43:42,246 opt = self.warn_dash_deprecation(opt, section) 2024-11-04T09:43:42,764 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:495: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-11-04T09:43:42,764 !! 2024-11-04T09:43:42,766 ******************************************************************************** 2024-11-04T09:43:42,766 Usage of dash-separated 'description-file' will not be supported in future 2024-11-04T09:43:42,767 versions. Please use the underscore name 'description_file' instead. 2024-11-04T09:43:42,768 By 2025-Mar-03, you need to update your project and remove deprecated calls 2024-11-04T09:43:42,768 or your builds will no longer be supported. 2024-11-04T09:43:42,769 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-11-04T09:43:42,770 ******************************************************************************** 2024-11-04T09:43:42,771 !! 2024-11-04T09:43:42,772 opt = self.warn_dash_deprecation(opt, section) 2024-11-04T09:43:42,799 running egg_info 2024-11-04T09:43:42,827 creating /tmp/pip-pip-egg-info-dynko6ai/spci.egg-info 2024-11-04T09:43:42,828 writing /tmp/pip-pip-egg-info-dynko6ai/spci.egg-info/PKG-INFO 2024-11-04T09:43:42,832 writing dependency_links to /tmp/pip-pip-egg-info-dynko6ai/spci.egg-info/dependency_links.txt 2024-11-04T09:43:42,834 writing entry points to /tmp/pip-pip-egg-info-dynko6ai/spci.egg-info/entry_points.txt 2024-11-04T09:43:42,836 writing requirements to /tmp/pip-pip-egg-info-dynko6ai/spci.egg-info/requires.txt 2024-11-04T09:43:42,837 writing top-level names to /tmp/pip-pip-egg-info-dynko6ai/spci.egg-info/top_level.txt 2024-11-04T09:43:42,839 writing manifest file '/tmp/pip-pip-egg-info-dynko6ai/spci.egg-info/SOURCES.txt' 2024-11-04T09:43:42,932 reading manifest file '/tmp/pip-pip-egg-info-dynko6ai/spci.egg-info/SOURCES.txt' 2024-11-04T09:43:42,933 reading manifest template 'MANIFEST.in' 2024-11-04T09:43:42,937 writing manifest file '/tmp/pip-pip-egg-info-dynko6ai/spci.egg-info/SOURCES.txt' 2024-11-04T09:43:43,048 Preparing metadata (setup.py): finished with status 'done' 2024-11-04T09:43:43,052 Source in /tmp/pip-wheel-yndsjom_/spci_9160ec7f943b4eef97c5f5508e586a86 has version 1.1.4, which satisfies requirement spci==1.1.4 from https://files.pythonhosted.org/packages/ce/15/885ebd7b398b7d491ddec994087220fb4e3c529b9f2b3f8412a284e3375a/spci-1.1.4.tar.gz 2024-11-04T09:43:43,053 Removed spci==1.1.4 from https://files.pythonhosted.org/packages/ce/15/885ebd7b398b7d491ddec994087220fb4e3c529b9f2b3f8412a284e3375a/spci-1.1.4.tar.gz from build tracker '/tmp/pip-build-tracker-yf41q5et' 2024-11-04T09:43:43,058 Created temporary directory: /tmp/pip-unpack-0anl4y04 2024-11-04T09:43:43,059 Created temporary directory: /tmp/pip-unpack-xx3ssww0 2024-11-04T09:43:43,060 Building wheels for collected packages: spci 2024-11-04T09:43:43,064 Created temporary directory: /tmp/pip-wheel-7mi1s2oz 2024-11-04T09:43:43,065 Building wheel for spci (setup.py): started 2024-11-04T09:43:43,066 Destination directory: /tmp/pip-wheel-7mi1s2oz 2024-11-04T09:43:43,066 Running command python setup.py bdist_wheel 2024-11-04T09:43:43,555 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:495: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-11-04T09:43:43,555 !! 2024-11-04T09:43:43,557 ******************************************************************************** 2024-11-04T09:43:43,557 Usage of dash-separated 'description-file' will not be supported in future 2024-11-04T09:43:43,558 versions. Please use the underscore name 'description_file' instead. 2024-11-04T09:43:43,559 By 2025-Mar-03, you need to update your project and remove deprecated calls 2024-11-04T09:43:43,560 or your builds will no longer be supported. 2024-11-04T09:43:43,561 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-11-04T09:43:43,561 ******************************************************************************** 2024-11-04T09:43:43,562 !! 2024-11-04T09:43:43,563 opt = self.warn_dash_deprecation(opt, section) 2024-11-04T09:43:44,081 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:495: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-11-04T09:43:44,082 !! 2024-11-04T09:43:44,083 ******************************************************************************** 2024-11-04T09:43:44,083 Usage of dash-separated 'description-file' will not be supported in future 2024-11-04T09:43:44,084 versions. Please use the underscore name 'description_file' instead. 2024-11-04T09:43:44,085 By 2025-Mar-03, you need to update your project and remove deprecated calls 2024-11-04T09:43:44,086 or your builds will no longer be supported. 2024-11-04T09:43:44,087 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-11-04T09:43:44,087 ******************************************************************************** 2024-11-04T09:43:44,089 !! 2024-11-04T09:43:44,090 opt = self.warn_dash_deprecation(opt, section) 2024-11-04T09:43:44,090 running bdist_wheel 2024-11-04T09:43:44,222 running build 2024-11-04T09:43:44,223 running build_py 2024-11-04T09:43:44,254 creating build/lib/spci 2024-11-04T09:43:44,256 copying spci/find_frags_rdkit.py -> build/lib/spci 2024-11-04T09:43:44,259 copying spci/find_murcko_rdkit.py -> build/lib/spci 2024-11-04T09:43:44,261 copying spci/extractsdf.py -> build/lib/spci 2024-11-04T09:43:44,263 copying spci/mol_context.py -> build/lib/spci 2024-11-04T09:43:44,265 copying spci/sdf_field2title.py -> build/lib/spci 2024-11-04T09:43:44,267 copying spci/filter_descriptors.py -> build/lib/spci 2024-11-04T09:43:44,270 copying spci/descriptors.py -> build/lib/spci 2024-11-04T09:43:44,272 copying spci/sirms_file_class.py -> build/lib/spci 2024-11-04T09:43:44,274 copying spci/model.py -> build/lib/spci 2024-11-04T09:43:44,277 copying spci/calc_atomic_properties_chemaxon.py -> build/lib/spci 2024-11-04T09:43:44,279 copying spci/predict.py -> build/lib/spci 2024-11-04T09:43:44,282 copying spci/spci.py -> build/lib/spci 2024-11-04T09:43:44,286 copying spci/plot_property_distribution.py -> build/lib/spci 2024-11-04T09:43:44,287 copying spci/find_frags_auto_rdkit.py -> build/lib/spci 2024-11-04T09:43:44,290 copying spci/__init__.py -> build/lib/spci 2024-11-04T09:43:44,291 copying spci/plot_contributions.py -> build/lib/spci 2024-11-04T09:43:44,294 copying spci/calc_frag_contrib.py -> build/lib/spci 2024-11-04T09:43:44,296 running egg_info 2024-11-04T09:43:44,323 writing spci.egg-info/PKG-INFO 2024-11-04T09:43:44,327 writing dependency_links to spci.egg-info/dependency_links.txt 2024-11-04T09:43:44,329 writing entry points to spci.egg-info/entry_points.txt 2024-11-04T09:43:44,331 writing requirements to spci.egg-info/requires.txt 2024-11-04T09:43:44,332 writing top-level names to spci.egg-info/top_level.txt 2024-11-04T09:43:44,366 reading manifest file 'spci.egg-info/SOURCES.txt' 2024-11-04T09:43:44,370 reading manifest template 'MANIFEST.in' 2024-11-04T09:43:44,374 writing manifest file 'spci.egg-info/SOURCES.txt' 2024-11-04T09:43:44,377 copying spci/default.smarts -> build/lib/spci 2024-11-04T09:43:44,380 copying spci/setup.txt -> build/lib/spci 2024-11-04T09:43:44,382 copying spci/std_rules.xml -> build/lib/spci 2024-11-04T09:43:44,411 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-11-04T09:43:44,412 !! 2024-11-04T09:43:44,413 ******************************************************************************** 2024-11-04T09:43:44,413 Please avoid running ``setup.py`` directly. 2024-11-04T09:43:44,414 Instead, use pypa/build, pypa/installer or other 2024-11-04T09:43:44,415 standards-based tools. 2024-11-04T09:43:44,416 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-11-04T09:43:44,416 ******************************************************************************** 2024-11-04T09:43:44,417 !! 2024-11-04T09:43:44,418 self.initialize_options() 2024-11-04T09:43:44,441 installing to build/bdist.linux-armv7l/wheel 2024-11-04T09:43:44,441 running install 2024-11-04T09:43:44,466 running install_lib 2024-11-04T09:43:44,494 creating build/bdist.linux-armv7l/wheel 2024-11-04T09:43:44,496 creating build/bdist.linux-armv7l/wheel/spci 2024-11-04T09:43:44,498 copying build/lib/spci/find_frags_rdkit.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,500 copying build/lib/spci/std_rules.xml -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,503 copying build/lib/spci/find_murcko_rdkit.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,504 copying build/lib/spci/extractsdf.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,507 copying build/lib/spci/setup.txt -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,509 copying build/lib/spci/mol_context.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,512 copying build/lib/spci/sdf_field2title.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,513 copying build/lib/spci/filter_descriptors.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,516 copying build/lib/spci/descriptors.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,518 copying build/lib/spci/default.smarts -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,520 copying build/lib/spci/sirms_file_class.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,523 copying build/lib/spci/model.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,525 copying build/lib/spci/calc_atomic_properties_chemaxon.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,528 copying build/lib/spci/predict.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,530 copying build/lib/spci/spci.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,534 copying build/lib/spci/plot_property_distribution.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,536 copying build/lib/spci/find_frags_auto_rdkit.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,538 copying build/lib/spci/__init__.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,540 copying build/lib/spci/plot_contributions.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,542 copying build/lib/spci/calc_frag_contrib.py -> build/bdist.linux-armv7l/wheel/./spci 2024-11-04T09:43:44,545 running install_egg_info 2024-11-04T09:43:44,580 Copying spci.egg-info to build/bdist.linux-armv7l/wheel/./spci-1.1.4-py3.11.egg-info 2024-11-04T09:43:44,591 running install_scripts 2024-11-04T09:43:44,607 creating build/bdist.linux-armv7l/wheel/spci-1.1.4.dist-info/WHEEL 2024-11-04T09:43:44,610 creating '/tmp/pip-wheel-7mi1s2oz/spci-1.1.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-11-04T09:43:44,612 adding 'spci/__init__.py' 2024-11-04T09:43:44,614 adding 'spci/calc_atomic_properties_chemaxon.py' 2024-11-04T09:43:44,616 adding 'spci/calc_frag_contrib.py' 2024-11-04T09:43:44,618 adding 'spci/default.smarts' 2024-11-04T09:43:44,620 adding 'spci/descriptors.py' 2024-11-04T09:43:44,622 adding 'spci/extractsdf.py' 2024-11-04T09:43:44,623 adding 'spci/filter_descriptors.py' 2024-11-04T09:43:44,625 adding 'spci/find_frags_auto_rdkit.py' 2024-11-04T09:43:44,627 adding 'spci/find_frags_rdkit.py' 2024-11-04T09:43:44,628 adding 'spci/find_murcko_rdkit.py' 2024-11-04T09:43:44,631 adding 'spci/model.py' 2024-11-04T09:43:44,633 adding 'spci/mol_context.py' 2024-11-04T09:43:44,635 adding 'spci/plot_contributions.py' 2024-11-04T09:43:44,637 adding 'spci/plot_property_distribution.py' 2024-11-04T09:43:44,639 adding 'spci/predict.py' 2024-11-04T09:43:44,640 adding 'spci/sdf_field2title.py' 2024-11-04T09:43:44,642 adding 'spci/setup.txt' 2024-11-04T09:43:44,643 adding 'spci/sirms_file_class.py' 2024-11-04T09:43:44,648 adding 'spci/spci.py' 2024-11-04T09:43:44,650 adding 'spci/std_rules.xml' 2024-11-04T09:43:44,652 adding 'spci-1.1.4.dist-info/METADATA' 2024-11-04T09:43:44,653 adding 'spci-1.1.4.dist-info/WHEEL' 2024-11-04T09:43:44,654 adding 'spci-1.1.4.dist-info/entry_points.txt' 2024-11-04T09:43:44,655 adding 'spci-1.1.4.dist-info/top_level.txt' 2024-11-04T09:43:44,656 adding 'spci-1.1.4.dist-info/RECORD' 2024-11-04T09:43:44,659 removing build/bdist.linux-armv7l/wheel 2024-11-04T09:43:44,773 Building wheel for spci (setup.py): finished with status 'done' 2024-11-04T09:43:44,777 Created wheel for spci: filename=spci-1.1.4-py3-none-any.whl size=55865 sha256=1a09c7a00adf4d1b0cbde9fd85aa2523d207bf9df9cf4001539a58b043795b0b 2024-11-04T09:43:44,778 Stored in directory: /tmp/pip-ephem-wheel-cache-31fe11e7/wheels/4a/63/1d/d71956c92d66df7411c27694dc941a1d49e313d8a41d59d51b 2024-11-04T09:43:44,788 Successfully built spci 2024-11-04T09:43:44,793 Removed build tracker: '/tmp/pip-build-tracker-yf41q5et'