2024-11-04T22:45:43,228 Created temporary directory: /tmp/pip-build-tracker-nmramaak 2024-11-04T22:45:43,229 Initialized build tracking at /tmp/pip-build-tracker-nmramaak 2024-11-04T22:45:43,230 Created build tracker: /tmp/pip-build-tracker-nmramaak 2024-11-04T22:45:43,230 Entered build tracker: /tmp/pip-build-tracker-nmramaak 2024-11-04T22:45:43,231 Created temporary directory: /tmp/pip-wheel-whphlfpz 2024-11-04T22:45:43,235 Created temporary directory: /tmp/pip-ephem-wheel-cache-9cr8si09 2024-11-04T22:45:43,278 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-11-04T22:45:43,280 2 location(s) to search for versions of nrpcalc: 2024-11-04T22:45:43,280 * https://pypi.org/simple/nrpcalc/ 2024-11-04T22:45:43,280 * https://www.piwheels.org/simple/nrpcalc/ 2024-11-04T22:45:43,281 Fetching project page and analyzing links: https://pypi.org/simple/nrpcalc/ 2024-11-04T22:45:43,282 Getting page https://pypi.org/simple/nrpcalc/ 2024-11-04T22:45:43,283 Found index url https://pypi.org/simple/ 2024-11-04T22:45:43,503 Fetched page https://pypi.org/simple/nrpcalc/ as application/vnd.pypi.simple.v1+json 2024-11-04T22:45:43,506 Ignoring invalid Requires-Python ('>=2.7, <3.0.*') for link: https://files.pythonhosted.org/packages/c5/a4/6a403b7588caa3094914c8e28a35b4a6cbd2e343b95e6b7a1f87efefc221/nrpcalc-1.1.22.tar.gz (from https://pypi.org/simple/nrpcalc/) (requires-python:>=2.7, <3.0.*) 2024-11-04T22:45:43,506 Found link https://files.pythonhosted.org/packages/c5/a4/6a403b7588caa3094914c8e28a35b4a6cbd2e343b95e6b7a1f87efefc221/nrpcalc-1.1.22.tar.gz (from https://pypi.org/simple/nrpcalc/) (requires-python:>=2.7, <3.0.*), version: 1.1.22 2024-11-04T22:45:43,507 Skipping link: No binaries permitted for nrpcalc: https://files.pythonhosted.org/packages/50/45/58c3f2e35784ce8268fd81ced9239b2decd32599b633d1a255f170d407be/nrpcalc-1.6.3-py3-none-any.whl (from https://pypi.org/simple/nrpcalc/) (requires-python:!=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, >=3.6.*, <4.0.*) 2024-11-04T22:45:43,508 Ignoring invalid Requires-Python ('!=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, >=3.6.*, <4.0.*') for link: https://files.pythonhosted.org/packages/85/a6/ff15f61f62b64717d5e76f75634a3aa0aa252c64ea88c3a286f28c12ae29/nrpcalc-1.6.3.tar.gz (from https://pypi.org/simple/nrpcalc/) (requires-python:!=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, >=3.6.*, <4.0.*) 2024-11-04T22:45:43,508 Found link https://files.pythonhosted.org/packages/85/a6/ff15f61f62b64717d5e76f75634a3aa0aa252c64ea88c3a286f28c12ae29/nrpcalc-1.6.3.tar.gz (from https://pypi.org/simple/nrpcalc/) (requires-python:!=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, >=3.6.*, <4.0.*), version: 1.6.3 2024-11-04T22:45:43,509 Skipping link: No binaries permitted for nrpcalc: https://files.pythonhosted.org/packages/e4/25/b062ff19f75a509534714c7f88627fdf9be7bebe50da9be7acd1c1a385f7/nrpcalc-1.7.5-py3-none-any.whl (from https://pypi.org/simple/nrpcalc/) (requires-python:<4,>=3.6) 2024-11-04T22:45:43,510 Found link https://files.pythonhosted.org/packages/fc/65/75e4b638eef347bb8bdd59fee2f2f1dd32ec60614edbd03b1ebc2122a696/nrpcalc-1.7.5.tar.gz (from https://pypi.org/simple/nrpcalc/) (requires-python:<4,>=3.6), version: 1.7.5 2024-11-04T22:45:43,511 Fetching project page and analyzing links: https://www.piwheels.org/simple/nrpcalc/ 2024-11-04T22:45:43,512 Getting page https://www.piwheels.org/simple/nrpcalc/ 2024-11-04T22:45:43,513 Found index url https://www.piwheels.org/simple/ 2024-11-04T22:45:43,726 Fetched page https://www.piwheels.org/simple/nrpcalc/ as text/html 2024-11-04T22:45:43,727 Skipping link: No binaries permitted for nrpcalc: https://www.piwheels.org/simple/nrpcalc/nrpcalc-1.6.3-py3-none-any.whl#sha256=b69cdacb7dba482616d9c5a2963647b955045ee74695b04296c7b9ee6cfd10ce (from https://www.piwheels.org/simple/nrpcalc/) (requires-python:!=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, >=3.6.*, <4.0.*) 2024-11-04T22:45:43,728 Skipping link: not a file: https://www.piwheels.org/simple/nrpcalc/ 2024-11-04T22:45:43,729 Skipping link: not a file: https://pypi.org/simple/nrpcalc/ 2024-11-04T22:45:43,747 Given no hashes to check 1 links for project 'nrpcalc': discarding no candidates 2024-11-04T22:45:43,749 Collecting nrpcalc==1.7.5 2024-11-04T22:45:43,751 Created temporary directory: /tmp/pip-unpack-oe3b4w9q 2024-11-04T22:45:43,975 Downloading nrpcalc-1.7.5.tar.gz (44 kB) 2024-11-04T22:45:44,084 Added nrpcalc==1.7.5 from https://files.pythonhosted.org/packages/fc/65/75e4b638eef347bb8bdd59fee2f2f1dd32ec60614edbd03b1ebc2122a696/nrpcalc-1.7.5.tar.gz to build tracker '/tmp/pip-build-tracker-nmramaak' 2024-11-04T22:45:44,085 Running setup.py (path:/tmp/pip-wheel-whphlfpz/nrpcalc_67b8c674746f40a2b5a217a68a990ca2/setup.py) egg_info for package nrpcalc 2024-11-04T22:45:44,086 Created temporary directory: /tmp/pip-pip-egg-info-b1uy59vu 2024-11-04T22:45:44,087 Preparing metadata (setup.py): started 2024-11-04T22:45:44,088 Running command python setup.py egg_info 2024-11-04T22:45:44,577 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:495: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-11-04T22:45:44,577 !! 2024-11-04T22:45:44,578 ******************************************************************************** 2024-11-04T22:45:44,578 Usage of dash-separated 'description-file' will not be supported in future 2024-11-04T22:45:44,579 versions. Please use the underscore name 'description_file' instead. 2024-11-04T22:45:44,580 By 2025-Mar-03, you need to update your project and remove deprecated calls 2024-11-04T22:45:44,580 or your builds will no longer be supported. 2024-11-04T22:45:44,582 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-11-04T22:45:44,582 ******************************************************************************** 2024-11-04T22:45:44,583 !! 2024-11-04T22:45:44,584 opt = self.warn_dash_deprecation(opt, section) 2024-11-04T22:45:45,119 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:495: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-11-04T22:45:45,119 !! 2024-11-04T22:45:45,121 ******************************************************************************** 2024-11-04T22:45:45,121 Usage of dash-separated 'description-file' will not be supported in future 2024-11-04T22:45:45,122 versions. Please use the underscore name 'description_file' instead. 2024-11-04T22:45:45,123 By 2025-Mar-03, you need to update your project and remove deprecated calls 2024-11-04T22:45:45,124 or your builds will no longer be supported. 2024-11-04T22:45:45,125 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-11-04T22:45:45,126 ******************************************************************************** 2024-11-04T22:45:45,127 !! 2024-11-04T22:45:45,127 opt = self.warn_dash_deprecation(opt, section) 2024-11-04T22:45:45,153 running egg_info 2024-11-04T22:45:45,181 creating /tmp/pip-pip-egg-info-b1uy59vu/nrpcalc.egg-info 2024-11-04T22:45:45,182 writing /tmp/pip-pip-egg-info-b1uy59vu/nrpcalc.egg-info/PKG-INFO 2024-11-04T22:45:45,186 writing dependency_links to /tmp/pip-pip-egg-info-b1uy59vu/nrpcalc.egg-info/dependency_links.txt 2024-11-04T22:45:45,188 writing requirements to /tmp/pip-pip-egg-info-b1uy59vu/nrpcalc.egg-info/requires.txt 2024-11-04T22:45:45,189 writing top-level names to /tmp/pip-pip-egg-info-b1uy59vu/nrpcalc.egg-info/top_level.txt 2024-11-04T22:45:45,191 writing manifest file '/tmp/pip-pip-egg-info-b1uy59vu/nrpcalc.egg-info/SOURCES.txt' 2024-11-04T22:45:45,279 reading manifest file '/tmp/pip-pip-egg-info-b1uy59vu/nrpcalc.egg-info/SOURCES.txt' 2024-11-04T22:45:45,281 adding license file 'LICENSE' 2024-11-04T22:45:45,284 writing manifest file '/tmp/pip-pip-egg-info-b1uy59vu/nrpcalc.egg-info/SOURCES.txt' 2024-11-04T22:45:45,391 Preparing metadata (setup.py): finished with status 'done' 2024-11-04T22:45:45,397 Source in /tmp/pip-wheel-whphlfpz/nrpcalc_67b8c674746f40a2b5a217a68a990ca2 has version 1.7.5, which satisfies requirement nrpcalc==1.7.5 from https://files.pythonhosted.org/packages/fc/65/75e4b638eef347bb8bdd59fee2f2f1dd32ec60614edbd03b1ebc2122a696/nrpcalc-1.7.5.tar.gz 2024-11-04T22:45:45,398 Removed nrpcalc==1.7.5 from https://files.pythonhosted.org/packages/fc/65/75e4b638eef347bb8bdd59fee2f2f1dd32ec60614edbd03b1ebc2122a696/nrpcalc-1.7.5.tar.gz from build tracker '/tmp/pip-build-tracker-nmramaak' 2024-11-04T22:45:45,407 Created temporary directory: /tmp/pip-unpack-f2taympj 2024-11-04T22:45:45,408 Created temporary directory: /tmp/pip-unpack-i41oobxz 2024-11-04T22:45:45,409 Building wheels for collected packages: nrpcalc 2024-11-04T22:45:45,412 Created temporary directory: /tmp/pip-wheel-0ngsjwtt 2024-11-04T22:45:45,413 Building wheel for nrpcalc (setup.py): started 2024-11-04T22:45:45,414 Destination directory: /tmp/pip-wheel-0ngsjwtt 2024-11-04T22:45:45,415 Running command python setup.py bdist_wheel 2024-11-04T22:45:45,908 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:495: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-11-04T22:45:45,908 !! 2024-11-04T22:45:45,910 ******************************************************************************** 2024-11-04T22:45:45,910 Usage of dash-separated 'description-file' will not be supported in future 2024-11-04T22:45:45,911 versions. Please use the underscore name 'description_file' instead. 2024-11-04T22:45:45,912 By 2025-Mar-03, you need to update your project and remove deprecated calls 2024-11-04T22:45:45,912 or your builds will no longer be supported. 2024-11-04T22:45:45,913 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-11-04T22:45:45,914 ******************************************************************************** 2024-11-04T22:45:45,915 !! 2024-11-04T22:45:45,915 opt = self.warn_dash_deprecation(opt, section) 2024-11-04T22:45:46,441 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:495: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-11-04T22:45:46,442 !! 2024-11-04T22:45:46,443 ******************************************************************************** 2024-11-04T22:45:46,443 Usage of dash-separated 'description-file' will not be supported in future 2024-11-04T22:45:46,444 versions. Please use the underscore name 'description_file' instead. 2024-11-04T22:45:46,445 By 2025-Mar-03, you need to update your project and remove deprecated calls 2024-11-04T22:45:46,446 or your builds will no longer be supported. 2024-11-04T22:45:46,447 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-11-04T22:45:46,447 ******************************************************************************** 2024-11-04T22:45:46,449 !! 2024-11-04T22:45:46,449 opt = self.warn_dash_deprecation(opt, section) 2024-11-04T22:45:46,450 running bdist_wheel 2024-11-04T22:45:46,582 running build 2024-11-04T22:45:46,582 running build_py 2024-11-04T22:45:46,612 creating build/lib/nrpcalc 2024-11-04T22:45:46,614 copying nrpcalc/nrpcalc.py -> build/lib/nrpcalc 2024-11-04T22:45:46,617 copying nrpcalc/__init__.py -> build/lib/nrpcalc 2024-11-04T22:45:46,620 creating build/lib/nrpcalc/base 2024-11-04T22:45:46,621 copying nrpcalc/base/kmerSetArray.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,623 copying nrpcalc/base/berno.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,625 copying nrpcalc/base/synthesis.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,627 copying nrpcalc/base/vercov.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,630 copying nrpcalc/base/hgraph.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,632 copying nrpcalc/base/kmerSetDB.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,634 copying nrpcalc/base/utils.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,637 copying nrpcalc/base/recovery.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,639 copying nrpcalc/base/projector.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,640 copying nrpcalc/base/finder.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,643 copying nrpcalc/base/__init__.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,644 copying nrpcalc/base/makerchecks.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,647 copying nrpcalc/base/maker.py -> build/lib/nrpcalc/base 2024-11-04T22:45:46,679 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-11-04T22:45:46,680 !! 2024-11-04T22:45:46,681 ******************************************************************************** 2024-11-04T22:45:46,682 Please avoid running ``setup.py`` directly. 2024-11-04T22:45:46,682 Instead, use pypa/build, pypa/installer or other 2024-11-04T22:45:46,682 standards-based tools. 2024-11-04T22:45:46,683 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-11-04T22:45:46,684 ******************************************************************************** 2024-11-04T22:45:46,685 !! 2024-11-04T22:45:46,685 self.initialize_options() 2024-11-04T22:45:46,710 installing to build/bdist.linux-armv7l/wheel 2024-11-04T22:45:46,711 running install 2024-11-04T22:45:46,736 running install_lib 2024-11-04T22:45:46,765 creating build/bdist.linux-armv7l/wheel 2024-11-04T22:45:46,767 creating build/bdist.linux-armv7l/wheel/nrpcalc 2024-11-04T22:45:46,768 copying build/lib/nrpcalc/nrpcalc.py -> build/bdist.linux-armv7l/wheel/./nrpcalc 2024-11-04T22:45:46,771 copying build/lib/nrpcalc/__init__.py -> build/bdist.linux-armv7l/wheel/./nrpcalc 2024-11-04T22:45:46,774 creating build/bdist.linux-armv7l/wheel/nrpcalc/base 2024-11-04T22:45:46,775 copying build/lib/nrpcalc/base/kmerSetArray.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,777 copying build/lib/nrpcalc/base/berno.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,779 copying build/lib/nrpcalc/base/synthesis.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,786 copying build/lib/nrpcalc/base/vercov.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,788 copying build/lib/nrpcalc/base/hgraph.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,790 copying build/lib/nrpcalc/base/kmerSetDB.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,793 copying build/lib/nrpcalc/base/utils.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,795 copying build/lib/nrpcalc/base/recovery.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,797 copying build/lib/nrpcalc/base/projector.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,799 copying build/lib/nrpcalc/base/finder.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,802 copying build/lib/nrpcalc/base/__init__.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,803 copying build/lib/nrpcalc/base/makerchecks.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,806 copying build/lib/nrpcalc/base/maker.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base 2024-11-04T22:45:46,809 running install_egg_info 2024-11-04T22:45:46,842 running egg_info 2024-11-04T22:45:46,869 writing nrpcalc.egg-info/PKG-INFO 2024-11-04T22:45:46,873 writing dependency_links to nrpcalc.egg-info/dependency_links.txt 2024-11-04T22:45:46,875 writing requirements to nrpcalc.egg-info/requires.txt 2024-11-04T22:45:46,876 writing top-level names to nrpcalc.egg-info/top_level.txt 2024-11-04T22:45:46,908 reading manifest file 'nrpcalc.egg-info/SOURCES.txt' 2024-11-04T22:45:46,911 adding license file 'LICENSE' 2024-11-04T22:45:46,914 writing manifest file 'nrpcalc.egg-info/SOURCES.txt' 2024-11-04T22:45:46,915 Copying nrpcalc.egg-info to build/bdist.linux-armv7l/wheel/./nrpcalc-1.7.5-py3.11.egg-info 2024-11-04T22:45:46,926 running install_scripts 2024-11-04T22:45:46,943 creating build/bdist.linux-armv7l/wheel/nrpcalc-1.7.5.dist-info/WHEEL 2024-11-04T22:45:46,946 creating '/tmp/pip-wheel-0ngsjwtt/nrpcalc-1.7.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-11-04T22:45:46,948 adding 'nrpcalc/__init__.py' 2024-11-04T22:45:46,951 adding 'nrpcalc/nrpcalc.py' 2024-11-04T22:45:46,953 adding 'nrpcalc/base/__init__.py' 2024-11-04T22:45:46,954 adding 'nrpcalc/base/berno.py' 2024-11-04T22:45:46,956 adding 'nrpcalc/base/finder.py' 2024-11-04T22:45:46,958 adding 'nrpcalc/base/hgraph.py' 2024-11-04T22:45:46,959 adding 'nrpcalc/base/kmerSetArray.py' 2024-11-04T22:45:46,961 adding 'nrpcalc/base/kmerSetDB.py' 2024-11-04T22:45:46,966 adding 'nrpcalc/base/maker.py' 2024-11-04T22:45:46,968 adding 'nrpcalc/base/makerchecks.py' 2024-11-04T22:45:46,969 adding 'nrpcalc/base/projector.py' 2024-11-04T22:45:46,971 adding 'nrpcalc/base/recovery.py' 2024-11-04T22:45:46,973 adding 'nrpcalc/base/synthesis.py' 2024-11-04T22:45:46,974 adding 'nrpcalc/base/utils.py' 2024-11-04T22:45:46,976 adding 'nrpcalc/base/vercov.py' 2024-11-04T22:45:46,978 adding 'nrpcalc-1.7.5.dist-info/LICENSE' 2024-11-04T22:45:46,980 adding 'nrpcalc-1.7.5.dist-info/METADATA' 2024-11-04T22:45:46,981 adding 'nrpcalc-1.7.5.dist-info/WHEEL' 2024-11-04T22:45:46,982 adding 'nrpcalc-1.7.5.dist-info/top_level.txt' 2024-11-04T22:45:46,983 adding 'nrpcalc-1.7.5.dist-info/RECORD' 2024-11-04T22:45:46,985 removing build/bdist.linux-armv7l/wheel 2024-11-04T22:45:47,099 Building wheel for nrpcalc (setup.py): finished with status 'done' 2024-11-04T22:45:47,102 Created wheel for nrpcalc: filename=nrpcalc-1.7.5-py3-none-any.whl size=42882 sha256=48ea422a5d37806a169b97581aacbdde0e6b5a0997f5a91b6956693f863ab7b2 2024-11-04T22:45:47,103 Stored in directory: /tmp/pip-ephem-wheel-cache-9cr8si09/wheels/1a/2f/6d/4a92cac17bb504504ddc6bd29b5150e3ea24150dbe174446fb 2024-11-04T22:45:47,116 Successfully built nrpcalc 2024-11-04T22:45:47,121 Removed build tracker: '/tmp/pip-build-tracker-nmramaak'