2024-11-06T21:33:45,480 Created temporary directory: /tmp/pip-build-tracker-1ka7ljok
2024-11-06T21:33:45,481 Initialized build tracking at /tmp/pip-build-tracker-1ka7ljok
2024-11-06T21:33:45,482 Created build tracker: /tmp/pip-build-tracker-1ka7ljok
2024-11-06T21:33:45,482 Entered build tracker: /tmp/pip-build-tracker-1ka7ljok
2024-11-06T21:33:45,483 Created temporary directory: /tmp/pip-wheel-96hzqn4c
2024-11-06T21:33:45,487 Created temporary directory: /tmp/pip-ephem-wheel-cache-g5cbk0fp
2024-11-06T21:33:45,529 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-11-06T21:33:45,531 2 location(s) to search for versions of sigprofilermatrixgenerator:
2024-11-06T21:33:45,531 * https://pypi.org/simple/sigprofilermatrixgenerator/
2024-11-06T21:33:45,531 * https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-11-06T21:33:45,532 Fetching project page and analyzing links: https://pypi.org/simple/sigprofilermatrixgenerator/
2024-11-06T21:33:45,533 Getting page https://pypi.org/simple/sigprofilermatrixgenerator/
2024-11-06T21:33:45,534 Found index url https://pypi.org/simple/
2024-11-06T21:33:45,767 Fetched page https://pypi.org/simple/sigprofilermatrixgenerator/ as application/vnd.pypi.simple.v1+json
2024-11-06T21:33:45,796   Found link https://files.pythonhosted.org/packages/c7/6a/28ddff4162d24d6994148c515057e5bfc71bb0183721f1ca875f6cc3c98a/SigProfilerMatrixGenerator-0.1.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.1
2024-11-06T21:33:45,797   Found link https://files.pythonhosted.org/packages/09/e0/a27c3a87eaa67985ed16425b07c6d0dbb9f2ed0bb370964a5eea8be9dc91/SigProfilerMatrixGenerator-0.1.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.2
2024-11-06T21:33:45,797   Found link https://files.pythonhosted.org/packages/bd/dd/b943503008f3dcda163b33e9402f52439b23c6b036cb328bcd37d6e7d010/SigProfilerMatrixGenerator-0.1.3.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.3
2024-11-06T21:33:45,798   Found link https://files.pythonhosted.org/packages/18/52/e8df4d5c50b73bee8f9ac77f5b30e1706176258c27c9ef81b20f467e3f60/SigProfilerMatrixGenerator-0.1.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.4
2024-11-06T21:33:45,799   Found link https://files.pythonhosted.org/packages/17/7b/f57ee232ba6fd2a0c0d49ce3777af69dea21e0ef979664825fbfd6e15d72/SigProfilerMatrixGenerator-0.1.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.5
2024-11-06T21:33:45,800   Found link https://files.pythonhosted.org/packages/7d/ea/fcb33c23e6653c3c50d6b438eb03cba08321e36d245b0642e4f4f29facd9/SigProfilerMatrixGenerator-0.1.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.6
2024-11-06T21:33:45,801   Found link https://files.pythonhosted.org/packages/f4/a3/770fcf7b2863289ff8d37137be8acc20995c64664d47dcd110dcaa8eedfb/SigProfilerMatrixGenerator-0.1.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.7
2024-11-06T21:33:45,801   Found link https://files.pythonhosted.org/packages/a9/0c/ae900daf1713185f851a882aafab8dbdf75cdd979fac87ac8b028ea3228e/SigProfilerMatrixGenerator-0.1.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.8
2024-11-06T21:33:45,802   Found link https://files.pythonhosted.org/packages/f9/58/915584f3317f44676353a359f2a91956fe9a1b4a7347487c0a6fe557b662/SigProfilerMatrixGenerator-0.1.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.9
2024-11-06T21:33:45,803   Found link https://files.pythonhosted.org/packages/e6/3a/9de0d7a6d81bcd6cf9386555aa3d0c8d9976927c066c9d05ce90fcc35f49/SigProfilerMatrixGenerator-0.1.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.10
2024-11-06T21:33:45,804   Found link https://files.pythonhosted.org/packages/a1/1f/2e6637742e6d3ef7aa0c36a946495fa8735826daadb50ae1939c6509bcb8/SigProfilerMatrixGenerator-0.1.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.11
2024-11-06T21:33:45,804   Found link https://files.pythonhosted.org/packages/9c/b9/5145722e31781332e84eba772a625e97101c77ac297e3f1c61384cee8f93/SigProfilerMatrixGenerator-0.1.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.12
2024-11-06T21:33:45,805   Found link https://files.pythonhosted.org/packages/56/03/e9e9b0dd8a36620b30677a94c2966d625c077727ab3c7c5ce657b75ddab1/SigProfilerMatrixGenerator-0.1.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.13
2024-11-06T21:33:45,806   Found link https://files.pythonhosted.org/packages/34/fc/a637b67b91bbc04cddaed487535962978a25e50face12c79da107a72e643/SigProfilerMatrixGenerator-0.1.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.14
2024-11-06T21:33:45,806   Found link https://files.pythonhosted.org/packages/be/d6/3678d80d2770647ee4ee99d672562fbe83e2ddebe4021ffdbe951410981e/SigProfilerMatrixGenerator-0.1.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.15
2024-11-06T21:33:45,807   Found link https://files.pythonhosted.org/packages/8f/46/07527d1d65dcad2f18876682b403ee40b8712a876894770519091819a94b/SigProfilerMatrixGenerator-0.1.16.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.16
2024-11-06T21:33:45,807   Found link https://files.pythonhosted.org/packages/0a/6f/fb786541b30b112da6f35604558b88f29adfd37b322e1bb477ead17ee013/SigProfilerMatrixGenerator-0.1.17.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.17
2024-11-06T21:33:45,808   Found link https://files.pythonhosted.org/packages/4c/be/499843893df4d02c0bdb5792039b9f550b358513fab7e252dc758fe461ab/SigProfilerMatrixGenerator-0.1.18.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.18
2024-11-06T21:33:45,809   Found link https://files.pythonhosted.org/packages/ce/31/b2b1bcda58e24b3a8c725477a0e1a6f41b0e9285741103f5deeb69bd0d04/SigProfilerMatrixGenerator-0.1.19.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.19
2024-11-06T21:33:45,809   Found link https://files.pythonhosted.org/packages/e1/21/fd9805121c089baa2223948e25ec2af1e8fdcde7544e433869740f1c0538/SigProfilerMatrixGenerator-0.1.20.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.20
2024-11-06T21:33:45,810   Found link https://files.pythonhosted.org/packages/9a/50/979cb4ca33ddd93a69ea767d17e17456f37f4466a7ba8f282ee55168c790/SigProfilerMatrixGenerator-0.1.21.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.21
2024-11-06T21:33:45,811   Found link https://files.pythonhosted.org/packages/e7/4b/f33f7d0898286be90c3db156863fafcde4e5e8f2ca4aef92e7c6f7424980/SigProfilerMatrixGenerator-0.1.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.22
2024-11-06T21:33:45,812   Found link https://files.pythonhosted.org/packages/c0/19/bfb595b2593be0eb945d196e1689714aade50c5ec43e96a351419579e18d/SigProfilerMatrixGenerator-0.1.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.23
2024-11-06T21:33:45,813   Found link https://files.pythonhosted.org/packages/e8/1c/7efb25df28e11476adad1e8cea8a2d8462d183175c7d4be29415fed872f3/SigProfilerMatrixGenerator-0.1.25.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.25
2024-11-06T21:33:45,813   Found link https://files.pythonhosted.org/packages/48/ca/6df1d33d4c0325190b09c0b2ff257cd46a97fe2b7136115a4ff5b1bcbb6d/SigProfilerMatrixGenerator-1.0.0.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.0
2024-11-06T21:33:45,814   Found link https://files.pythonhosted.org/packages/ae/1f/730357fb22484d14eb0cfe72e81962c2cfedf90cca75d94c6e1f88afb7b5/SigProfilerMatrixGenerator-1.0.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.1
2024-11-06T21:33:45,815   Found link https://files.pythonhosted.org/packages/8a/e3/1fc8743ee3078227377531039541b21553ab56fdc9914089aecaad18b218/SigProfilerMatrixGenerator-1.0.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.2
2024-11-06T21:33:45,816   Found link https://files.pythonhosted.org/packages/b3/89/6c10ccc120647b2b8a3ff3be7e12c8f0a7d3bbb648728a30e50a641fc5a2/SigProfilerMatrixGenerator-1.0.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.4
2024-11-06T21:33:45,817   Found link https://files.pythonhosted.org/packages/16/56/3e1fe788f9089baf807f1181061d68c19b0a3b4aa27cadedf86ffada0d6c/SigProfilerMatrixGenerator-1.0.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.5
2024-11-06T21:33:45,817   Found link https://files.pythonhosted.org/packages/31/23/bc67851b0fa5539bdb1528045700da2410ebbd4f771e493f7b5f17155365/SigProfilerMatrixGenerator-1.0.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.6
2024-11-06T21:33:45,818   Found link https://files.pythonhosted.org/packages/37/5e/7930da2d209c5944aae45447a8729c85958682f91ab8c5d2bca18ffcfab8/SigProfilerMatrixGenerator-1.0.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.7
2024-11-06T21:33:45,818   Found link https://files.pythonhosted.org/packages/12/c2/a1f85e85501667941a77de4751cd124173bb7dd6b37e5603d6818fbfa9ba/SigProfilerMatrixGenerator-1.0.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.8
2024-11-06T21:33:45,819   Found link https://files.pythonhosted.org/packages/68/8c/7923d4db4e08bbb467d66495f821f17ab2bed7e25b005b7fc153e2d08540/SigProfilerMatrixGenerator-1.0.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.9
2024-11-06T21:33:45,819   Found link https://files.pythonhosted.org/packages/57/3b/92569f53b63e6556dd46fcc514202e865878d7cb3b73f9481730d683f41c/SigProfilerMatrixGenerator-1.0.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.10
2024-11-06T21:33:45,820   Found link https://files.pythonhosted.org/packages/f7/4e/0d43742effcd43be3c8d865026b32017fa1407a6148bc0011dc4a8683509/SigProfilerMatrixGenerator-1.0.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.11
2024-11-06T21:33:45,821   Found link https://files.pythonhosted.org/packages/21/2e/5b81999306f02c711b74ce4c88a3725efb6502ce87b031a95e7f432715d2/SigProfilerMatrixGenerator-1.0.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.12
2024-11-06T21:33:45,821   Found link https://files.pythonhosted.org/packages/a6/ca/ec6bb5899fb7f42110102afa2636d04710b917e755b6b80fdef21e80c090/SigProfilerMatrixGenerator-1.0.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.13
2024-11-06T21:33:45,822   Found link https://files.pythonhosted.org/packages/aa/5f/9eb3e025425af0a8b4ab4dbd629158b53bdf092ec3ba73d87f5bb5af643a/SigProfilerMatrixGenerator-1.0.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.14
2024-11-06T21:33:45,823   Found link https://files.pythonhosted.org/packages/31/e8/5aacb489a0ad39cf892cbc7b91be93ee873e009a28c2ca0fda6ff210f1c2/SigProfilerMatrixGenerator-1.0.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.15
2024-11-06T21:33:45,824   Found link https://files.pythonhosted.org/packages/30/5a/62a7b4224b255e639b0177e9ddc719dce52ca0db701382e9c02a3267c1b3/SigProfilerMatrixGenerator-1.0.16.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.16
2024-11-06T21:33:45,824   Found link https://files.pythonhosted.org/packages/25/df/a04f48053469efffed5a2574bfdfd11f2fd6f6250596aebb9207fe5ddbd1/SigProfilerMatrixGenerator-1.0.17.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.17
2024-11-06T21:33:45,825   Found link https://files.pythonhosted.org/packages/e4/81/6e8a9f2c9b4454d8b7df1a2f889d9bfa20786f368469a0082859f9a226e9/SigProfilerMatrixGenerator-1.0.18.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.18
2024-11-06T21:33:45,826   Found link https://files.pythonhosted.org/packages/8c/07/d6e05005a349db7a2c6e33a03926a0dad081882cbd82781095070e5e6dd2/SigProfilerMatrixGenerator-1.0.19.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.19
2024-11-06T21:33:45,826   Found link https://files.pythonhosted.org/packages/e7/20/e149f3195446422925cf948bcc7e5aa8ccd6a89cd673d72aa481b7187e85/SigProfilerMatrixGenerator-1.0.20.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.20
2024-11-06T21:33:45,827   Found link https://files.pythonhosted.org/packages/dc/3f/3a10507445e03d04dcb132d4cf450a510f14076bb9b17284744cd9647cc6/SigProfilerMatrixGenerator-1.0.21.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.21
2024-11-06T21:33:45,828   Found link https://files.pythonhosted.org/packages/96/3f/4486e817c70d7d37084e168c33a8c77159c0cb5c931ab2afea1e771d94ed/SigProfilerMatrixGenerator-1.0.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.22
2024-11-06T21:33:45,829   Found link https://files.pythonhosted.org/packages/70/d6/0fb646f64373ff597bfc61020312d9f7ec781718043e5ab9e73348aaa77b/SigProfilerMatrixGenerator-1.0.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.23
2024-11-06T21:33:45,829   Found link https://files.pythonhosted.org/packages/cd/df/b2510bad2f657d52cfb18cab3de62b0de6fb7e7cab29bf7fb495eb97c731/SigProfilerMatrixGenerator-1.0.24.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.24
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2024-11-06T21:33:45,830   Found link https://files.pythonhosted.org/packages/74/e4/0946e6d541ac0b827722eba36fd908c90fd74e859f9bfdc423bd067d3595/SigProfilerMatrixGenerator-1.0.26.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.26
2024-11-06T21:33:45,831   Found link https://files.pythonhosted.org/packages/fe/ea/0c801757b97f261a9e4e1a4853a5b8debfff9570b28658ab842966a50e0f/SigProfilerMatrixGenerator-1.1.0.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.0
2024-11-06T21:33:45,832   Found link https://files.pythonhosted.org/packages/9f/b3/bfc2353a925e4adbaa27767e37fcf0df31a68fb78deacff8a52cb7fd7563/SigProfilerMatrixGenerator-1.1.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.1
2024-11-06T21:33:45,833   Found link https://files.pythonhosted.org/packages/f3/66/47c778b0e3eb8e486a92ef9449a94c7ca1ed43ff376c848f943dfde7c596/SigProfilerMatrixGenerator-1.1.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.2
2024-11-06T21:33:45,833   Found link https://files.pythonhosted.org/packages/d2/b1/9a5769d42d5d513cebb7bce116a823957ee2a49c32e068634c0294cca07c/SigProfilerMatrixGenerator-1.1.3.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.3
2024-11-06T21:33:45,834   Found link https://files.pythonhosted.org/packages/71/5d/0f501a5a374e675476177d0731c9e048ea6cc964902b185beb673849d0f0/SigProfilerMatrixGenerator-1.1.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.4
2024-11-06T21:33:45,835   Found link https://files.pythonhosted.org/packages/f7/d8/cf8892155dd3226a6b86df28e91e0ed389d16082d9109ad5ab98c06f6a23/SigProfilerMatrixGenerator-1.1.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.5
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2024-11-06T21:33:45,836   Found link https://files.pythonhosted.org/packages/f2/6f/3c38ca097d04587ea2807d6002783f4b5740cadfbb807d23c80b909aff13/SigProfilerMatrixGenerator-1.1.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.7
2024-11-06T21:33:45,837   Found link https://files.pythonhosted.org/packages/bd/48/84e1963975ceab1231f2913efcc3f7cb8cb48fd162e97c70fc1289c3132c/SigProfilerMatrixGenerator-1.1.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.8
2024-11-06T21:33:45,838   Found link https://files.pythonhosted.org/packages/23/0d/834403077582d0634f8134dc0356ec1a29901c22fb864cd0c541b1c231ef/SigProfilerMatrixGenerator-1.1.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.9
2024-11-06T21:33:45,838   Found link https://files.pythonhosted.org/packages/20/d7/3cc96e6bb315ec5dd52b2063a13d279276df7fe44475388c1c48c156c53c/SigProfilerMatrixGenerator-1.1.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.10
2024-11-06T21:33:45,839   Found link https://files.pythonhosted.org/packages/4d/9a/e833c99f878bf981d6c0a0ee6f2e61ffb700943be9135f777df873802444/SigProfilerMatrixGenerator-1.1.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.11
2024-11-06T21:33:45,840   Found link https://files.pythonhosted.org/packages/3a/1f/2af2e39b20153ff125e5a5eea041411141ee78935f3e6053be62c33df6e2/SigProfilerMatrixGenerator-1.1.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.12
2024-11-06T21:33:45,840   Found link https://files.pythonhosted.org/packages/31/09/67b586235317fb7f025b3958092e21cd4ac78a3e4868099147e5bbecb10d/SigProfilerMatrixGenerator-1.1.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.13
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2024-11-06T21:33:45,903   Found link https://files.pythonhosted.org/packages/17/31/d5ab5957d3267c803970d15aea1bb7363fbe61d20a26d24f393beadf665e/SigProfilerMatrixGenerator-1.2.27.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.27
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2024-11-06T21:33:45,904   Found link https://files.pythonhosted.org/packages/98/2c/1a80b4b318b0e5dfb758e86907eefc5912e3448fd4cd9f9416a2f406bce5/SigProfilerMatrixGenerator-1.2.28.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.28
2024-11-06T21:33:45,905   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://files.pythonhosted.org/packages/25/aa/8472dfaea9856f68d34ec4889bf350ca269d7a138fd629767c30c6d586ef/SigProfilerMatrixGenerator-1.2.29-py3-none-any.whl (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
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2024-11-06T21:33:45,907   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://files.pythonhosted.org/packages/58/49/f2d56087944c562c86f7071b4306d94894a200f0208be956e4d12b4fe5dc/SigProfilerMatrixGenerator-1.2.30-py3-none-any.whl (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
2024-11-06T21:33:45,908   Found link https://files.pythonhosted.org/packages/9a/87/627452fe76c9a58105fd5644a16aec98d00b837993af85d6d586578d9e5d/SigProfilerMatrixGenerator-1.2.30.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.30
2024-11-06T21:33:45,909   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://files.pythonhosted.org/packages/9d/91/2f8a0f2691d8e22de5d143cd14166155686904043aa0ea3f0451e38a354d/SigProfilerMatrixGenerator-1.2.31-py3-none-any.whl (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
2024-11-06T21:33:45,910   Found link https://files.pythonhosted.org/packages/4f/fd/8369d583f0f66a009cda3ab7e4cdedc02379eb687bc278f2953e2e336d69/SigProfilerMatrixGenerator-1.2.31.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.31
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2024-11-06T21:33:46,071 Fetched page https://www.piwheels.org/simple/sigprofilermatrixgenerator/ as text/html
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2024-11-06T21:33:46,152   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.5-py3-none-any.whl#sha256=d53df484d93081841405692aedb1277008c99e6a0af033b5896388d83a2bdc99 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
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2024-11-06T21:33:46,153   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.2-py3-none-any.whl#sha256=4a7bbdd72953c5b88432e51350eca29bf6aa02ba42ddfd25bce39aeb009e72ae (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,154   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.1-py3-none-any.whl#sha256=f3241561fcec6a5c0de8bfbff9666644aa97858abd6918f630b02cd0dc693be0 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,155   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.0-py3-none-any.whl#sha256=2baf8d7d7a986468236e54641751b8723ffb12c56ea21e1287a57ffded55eff2 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,155   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.25-py3-none-any.whl#sha256=aee497b7fad4bd30bfa688d613151b9673c70e2cf4b2904e9ba683b17712c980 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,156   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.23-py3-none-any.whl#sha256=dfa173d162a53137e68829a92518c083c9487cbe835d94364dec2ae7348e59c8 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,156   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.22-py3-none-any.whl#sha256=33b7f2f608e3bec7f43b5d3e971d8eab51c19febef85689b827ee22e0acfe80e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,157   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.21-py3-none-any.whl#sha256=9499c45cc55c74f2611b656cb8c826618e6c5dbf866d411f490f04d0f9426ad6 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,158   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.20-py3-none-any.whl#sha256=66a22a8ae93c7fb4e9baad202887e052740893fe0a61880b9f1ec95a09d1c0a0 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,158   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.19-py3-none-any.whl#sha256=365cdf3ead6ecb7d2cf9490b1fed6d629726f24d561d7630b30941cb1a29f348 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,159   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.18-py3-none-any.whl#sha256=449947ad34781b25cae1349dcd4b6d4549946ba009835356645bf7595b5c111a (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,159   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.17-py3-none-any.whl#sha256=ae0861d72d43dec0054d6516d9076cb80508514b36f46150767ab5341333d148 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,160   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.16-py3-none-any.whl#sha256=1001d7d6c2fa91680ec31c47ce6a079da2a667accc48484e0a7da3d77aac8740 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,161   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.15-py3-none-any.whl#sha256=288504536508f749d994d31930658f022b5401332bc810ded63b3cd0a49cef3e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,161   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.14-py3-none-any.whl#sha256=35fcddd4e462deee7959573e5e45dfa75d3f2b4ffce81939750a96eedac0b49d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,162   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.13-py3-none-any.whl#sha256=fbb27c504c29ed32596c118b00da8aa59f67854e86799b0b330f8a9f2470037a (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,162   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.12-py3-none-any.whl#sha256=24992b19ac04769baed3433c1b795f09597f608117d9e33c67bf40e474e99e84 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,163   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.11-py3-none-any.whl#sha256=c3b1761ab13a6dfb85050409e587eff691595bbf3b22248d8e45024792d0873d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,164   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.10-py3-none-any.whl#sha256=ee4542b0f7f955e9ed1a2377647dcdfe279cb2f4abb1c9f82f65331a696466e6 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,165   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.9-py3-none-any.whl#sha256=15e07c22774c555e633b3c7365931ec869749f9e93699b316ad8b88b90e98661 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,165   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.8-py3-none-any.whl#sha256=f8f015f2654820e23e139b06dad20b2b070c591cf3804c89728031fd465a1761 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,166   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.7-py3-none-any.whl#sha256=2b7197f9e7546455ecec51a3668c35746722be54000330897cdb3bab16b2846c (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,166   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.6-py3-none-any.whl#sha256=9bb77768a94a36b84528c72712dcbab7060347122efa53e72efa67f7db5a4c1d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,167   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.5-py3-none-any.whl#sha256=3bf26507e0f667a2958c8b58caa1307bf15b8dc11912252798fc227e99e98a0b (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,167   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.4-py3-none-any.whl#sha256=68f6f2f696d2ada3a780a59862675d42663d7c9e2e10563337ec01ab3e357dff (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,168   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.3-py3-none-any.whl#sha256=2c8f7184b84f55dd295a9ccbe96ba73b3f8746271bfd3844e25b8204b8df2044 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,168   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.2-py3-none-any.whl#sha256=a77ce882dc149901406d631720a444648a7acde033b8599373cd1cf50ea132b5 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,169   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.1-py3-none-any.whl#sha256=e2a5663dc832700fdb64b22350ca8b0d792920cd1a1ec3cbec1f670ebd911a30 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-11-06T21:33:46,169 Skipping link: not a file: https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-11-06T21:33:46,170 Skipping link: not a file: https://pypi.org/simple/sigprofilermatrixgenerator/
2024-11-06T21:33:46,200 Given no hashes to check 1 links for project 'sigprofilermatrixgenerator': discarding no candidates
2024-11-06T21:33:46,202 Collecting sigprofilermatrixgenerator==1.2.31
2024-11-06T21:33:46,205   Created temporary directory: /tmp/pip-unpack-uf01_els
2024-11-06T21:33:46,505   Downloading SigProfilerMatrixGenerator-1.2.31.tar.gz (40.5 MB)
2024-11-06T21:34:01,126   Added sigprofilermatrixgenerator==1.2.31 from https://files.pythonhosted.org/packages/4f/fd/8369d583f0f66a009cda3ab7e4cdedc02379eb687bc278f2953e2e336d69/SigProfilerMatrixGenerator-1.2.31.tar.gz to build tracker '/tmp/pip-build-tracker-1ka7ljok'
2024-11-06T21:34:01,129   Running setup.py (path:/tmp/pip-wheel-96hzqn4c/sigprofilermatrixgenerator_6eef106ce899411dbfb030c9ca6c3897/setup.py) egg_info for package sigprofilermatrixgenerator
2024-11-06T21:34:01,130   Created temporary directory: /tmp/pip-pip-egg-info-q4q54zya
2024-11-06T21:34:01,130   Preparing metadata (setup.py): started
2024-11-06T21:34:01,132   Running command python setup.py egg_info
2024-11-06T21:34:02,216   running egg_info
2024-11-06T21:34:02,244   creating /tmp/pip-pip-egg-info-q4q54zya/SigProfilerMatrixGenerator.egg-info
2024-11-06T21:34:02,245   writing /tmp/pip-pip-egg-info-q4q54zya/SigProfilerMatrixGenerator.egg-info/PKG-INFO
2024-11-06T21:34:02,250   writing dependency_links to /tmp/pip-pip-egg-info-q4q54zya/SigProfilerMatrixGenerator.egg-info/dependency_links.txt
2024-11-06T21:34:02,251   writing entry points to /tmp/pip-pip-egg-info-q4q54zya/SigProfilerMatrixGenerator.egg-info/entry_points.txt
2024-11-06T21:34:02,254   writing requirements to /tmp/pip-pip-egg-info-q4q54zya/SigProfilerMatrixGenerator.egg-info/requires.txt
2024-11-06T21:34:02,255   writing top-level names to /tmp/pip-pip-egg-info-q4q54zya/SigProfilerMatrixGenerator.egg-info/top_level.txt
2024-11-06T21:34:02,257   writing manifest file '/tmp/pip-pip-egg-info-q4q54zya/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-11-06T21:34:02,343   reading manifest file '/tmp/pip-pip-egg-info-q4q54zya/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-11-06T21:34:02,344   reading manifest template 'MANIFEST.in'
2024-11-06T21:34:02,662   adding license file 'LICENSE'
2024-11-06T21:34:02,694   writing manifest file '/tmp/pip-pip-egg-info-q4q54zya/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-11-06T21:34:02,803   Preparing metadata (setup.py): finished with status 'done'
2024-11-06T21:34:02,807   Source in /tmp/pip-wheel-96hzqn4c/sigprofilermatrixgenerator_6eef106ce899411dbfb030c9ca6c3897 has version 1.2.31, which satisfies requirement sigprofilermatrixgenerator==1.2.31 from https://files.pythonhosted.org/packages/4f/fd/8369d583f0f66a009cda3ab7e4cdedc02379eb687bc278f2953e2e336d69/SigProfilerMatrixGenerator-1.2.31.tar.gz
2024-11-06T21:34:02,808   Removed sigprofilermatrixgenerator==1.2.31 from https://files.pythonhosted.org/packages/4f/fd/8369d583f0f66a009cda3ab7e4cdedc02379eb687bc278f2953e2e336d69/SigProfilerMatrixGenerator-1.2.31.tar.gz from build tracker '/tmp/pip-build-tracker-1ka7ljok'
2024-11-06T21:34:02,817 Created temporary directory: /tmp/pip-unpack-94k1xgou
2024-11-06T21:34:02,818 Created temporary directory: /tmp/pip-unpack-tp7yjc6x
2024-11-06T21:34:02,819 Building wheels for collected packages: sigprofilermatrixgenerator
2024-11-06T21:34:02,823   Created temporary directory: /tmp/pip-wheel-nw6cttdr
2024-11-06T21:34:02,823   Building wheel for sigprofilermatrixgenerator (setup.py): started
2024-11-06T21:34:02,825   Destination directory: /tmp/pip-wheel-nw6cttdr
2024-11-06T21:34:02,825   Running command python setup.py bdist_wheel
2024-11-06T21:34:03,836   running bdist_wheel
2024-11-06T21:34:03,968   running build
2024-11-06T21:34:03,969   running build_py
2024-11-06T21:34:03,999   creating build/lib/SigProfilerMatrixGenerator
2024-11-06T21:34:04,001   copying SigProfilerMatrixGenerator/version.py -> build/lib/SigProfilerMatrixGenerator
2024-11-06T21:34:04,003   copying SigProfilerMatrixGenerator/__init__.py -> build/lib/SigProfilerMatrixGenerator
2024-11-06T21:34:04,005   copying SigProfilerMatrixGenerator/install.py -> build/lib/SigProfilerMatrixGenerator
2024-11-06T21:34:04,008   copying SigProfilerMatrixGenerator/test_helpers.py -> build/lib/SigProfilerMatrixGenerator
2024-11-06T21:34:04,010   running egg_info
2024-11-06T21:34:04,041   writing SigProfilerMatrixGenerator.egg-info/PKG-INFO
2024-11-06T21:34:04,045   writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt
2024-11-06T21:34:04,047   writing entry points to SigProfilerMatrixGenerator.egg-info/entry_points.txt
2024-11-06T21:34:04,050   writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt
2024-11-06T21:34:04,051   writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt
2024-11-06T21:34:04,081   reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-11-06T21:34:04,129   reading manifest template 'MANIFEST.in'
2024-11-06T21:34:04,423   adding license file 'LICENSE'
2024-11-06T21:34:04,471   writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-11-06T21:34:04,475   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.controllers' is absent from the `packages` configuration.
2024-11-06T21:34:04,476   !!

2024-11-06T21:34:04,477           ********************************************************************************
2024-11-06T21:34:04,477           ############################
2024-11-06T21:34:04,478           # Package would be ignored #
2024-11-06T21:34:04,478           ############################
2024-11-06T21:34:04,478           Python recognizes 'SigProfilerMatrixGenerator.controllers' as an importable package[^1],
2024-11-06T21:34:04,479           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,480           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,480           package, please make sure that 'SigProfilerMatrixGenerator.controllers' is explicitly added
2024-11-06T21:34:04,480           to the `packages` configuration field.

2024-11-06T21:34:04,481           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,482           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,482           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,484           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,485           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,486           If you don't want 'SigProfilerMatrixGenerator.controllers' to be distributed and are
2024-11-06T21:34:04,487           already explicitly excluding 'SigProfilerMatrixGenerator.controllers' via
2024-11-06T21:34:04,487           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,488           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,489           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,490           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,491           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,493           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,493                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,494                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,494                 directory, all directories are treated like packages.
2024-11-06T21:34:04,495           ********************************************************************************

2024-11-06T21:34:04,496   !!
2024-11-06T21:34:04,496     check.warn(importable)
2024-11-06T21:34:04,497   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV' is absent from the `packages` configuration.
2024-11-06T21:34:04,498   !!

2024-11-06T21:34:04,499           ********************************************************************************
2024-11-06T21:34:04,500           ############################
2024-11-06T21:34:04,500           # Package would be ignored #
2024-11-06T21:34:04,501           ############################
2024-11-06T21:34:04,502           Python recognizes 'SigProfilerMatrixGenerator.references.CNV' as an importable package[^1],
2024-11-06T21:34:04,502           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,503           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,503           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV' is explicitly added
2024-11-06T21:34:04,504           to the `packages` configuration field.

2024-11-06T21:34:04,504           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,505           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,505           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,506           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,507           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,508           If you don't want 'SigProfilerMatrixGenerator.references.CNV' to be distributed and are
2024-11-06T21:34:04,509           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV' via
2024-11-06T21:34:04,509           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,510           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,510           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,511           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,512           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,514           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,515                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,515                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,516                 directory, all directories are treated like packages.
2024-11-06T21:34:04,516           ********************************************************************************

2024-11-06T21:34:04,518   !!
2024-11-06T21:34:04,518     check.warn(importable)
2024-11-06T21:34:04,519   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_input' is absent from the `packages` configuration.
2024-11-06T21:34:04,519   !!

2024-11-06T21:34:04,520           ********************************************************************************
2024-11-06T21:34:04,521           ############################
2024-11-06T21:34:04,521           # Package would be ignored #
2024-11-06T21:34:04,522           ############################
2024-11-06T21:34:04,522           Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_input' as an importable package[^1],
2024-11-06T21:34:04,523           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,524           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,524           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_input' is explicitly added
2024-11-06T21:34:04,525           to the `packages` configuration field.

2024-11-06T21:34:04,526           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,526           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,527           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,528           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,529           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,530           If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_input' to be distributed and are
2024-11-06T21:34:04,531           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_input' via
2024-11-06T21:34:04,531           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,531           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,532           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,532           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,533           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,534           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,534                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,535                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,535                 directory, all directories are treated like packages.
2024-11-06T21:34:04,536           ********************************************************************************

2024-11-06T21:34:04,536   !!
2024-11-06T21:34:04,537     check.warn(importable)
2024-11-06T21:34:04,537   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_output' is absent from the `packages` configuration.
2024-11-06T21:34:04,538   !!

2024-11-06T21:34:04,538           ********************************************************************************
2024-11-06T21:34:04,539           ############################
2024-11-06T21:34:04,539           # Package would be ignored #
2024-11-06T21:34:04,540           ############################
2024-11-06T21:34:04,540           Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_output' as an importable package[^1],
2024-11-06T21:34:04,541           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,542           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,542           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_output' is explicitly added
2024-11-06T21:34:04,543           to the `packages` configuration field.

2024-11-06T21:34:04,544           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,545           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,545           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,546           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,547           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,548           If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_output' to be distributed and are
2024-11-06T21:34:04,549           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_output' via
2024-11-06T21:34:04,549           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,549           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,550           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,551           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,552           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,554           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,554                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,555                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,555                 directory, all directories are treated like packages.
2024-11-06T21:34:04,556           ********************************************************************************

2024-11-06T21:34:04,557   !!
2024-11-06T21:34:04,557     check.warn(importable)
2024-11-06T21:34:04,558   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.SV' is absent from the `packages` configuration.
2024-11-06T21:34:04,558   !!

2024-11-06T21:34:04,559           ********************************************************************************
2024-11-06T21:34:04,559           ############################
2024-11-06T21:34:04,559           # Package would be ignored #
2024-11-06T21:34:04,560           ############################
2024-11-06T21:34:04,560           Python recognizes 'SigProfilerMatrixGenerator.references.SV' as an importable package[^1],
2024-11-06T21:34:04,560           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,561           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,561           package, please make sure that 'SigProfilerMatrixGenerator.references.SV' is explicitly added
2024-11-06T21:34:04,562           to the `packages` configuration field.

2024-11-06T21:34:04,563           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,563           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,563           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,564           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,566           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,567           If you don't want 'SigProfilerMatrixGenerator.references.SV' to be distributed and are
2024-11-06T21:34:04,567           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV' via
2024-11-06T21:34:04,568           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,569           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,569           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,571           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,572           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,574           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,575                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,575                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,576                 directory, all directories are treated like packages.
2024-11-06T21:34:04,576           ********************************************************************************

2024-11-06T21:34:04,577   !!
2024-11-06T21:34:04,577     check.warn(importable)
2024-11-06T21:34:04,578   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input' is absent from the `packages` configuration.
2024-11-06T21:34:04,578   !!

2024-11-06T21:34:04,579           ********************************************************************************
2024-11-06T21:34:04,580           ############################
2024-11-06T21:34:04,580           # Package would be ignored #
2024-11-06T21:34:04,581           ############################
2024-11-06T21:34:04,582           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input' as an importable package[^1],
2024-11-06T21:34:04,582           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,583           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,584           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input' is explicitly added
2024-11-06T21:34:04,585           to the `packages` configuration field.

2024-11-06T21:34:04,586           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,586           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,586           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,587           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,588           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,588           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input' to be distributed and are
2024-11-06T21:34:04,589           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input' via
2024-11-06T21:34:04,589           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,590           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,590           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,591           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,591           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,593           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,593                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,593                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,594                 directory, all directories are treated like packages.
2024-11-06T21:34:04,594           ********************************************************************************

2024-11-06T21:34:04,595   !!
2024-11-06T21:34:04,596     check.warn(importable)
2024-11-06T21:34:04,596   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is absent from the `packages` configuration.
2024-11-06T21:34:04,597   !!

2024-11-06T21:34:04,598           ********************************************************************************
2024-11-06T21:34:04,599           ############################
2024-11-06T21:34:04,599           # Package would be ignored #
2024-11-06T21:34:04,600           ############################
2024-11-06T21:34:04,600           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' as an importable package[^1],
2024-11-06T21:34:04,601           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,602           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,602           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is explicitly added
2024-11-06T21:34:04,603           to the `packages` configuration field.

2024-11-06T21:34:04,604           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,604           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,605           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,606           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,607           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,608           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' to be distributed and are
2024-11-06T21:34:04,609           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' via
2024-11-06T21:34:04,609           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,610           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,610           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,611           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,612           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,613           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,613                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,614                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,614                 directory, all directories are treated like packages.
2024-11-06T21:34:04,614           ********************************************************************************

2024-11-06T21:34:04,615   !!
2024-11-06T21:34:04,615     check.warn(importable)
2024-11-06T21:34:04,616   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' is absent from the `packages` configuration.
2024-11-06T21:34:04,616   !!

2024-11-06T21:34:04,617           ********************************************************************************
2024-11-06T21:34:04,617           ############################
2024-11-06T21:34:04,618           # Package would be ignored #
2024-11-06T21:34:04,618           ############################
2024-11-06T21:34:04,618           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' as an importable package[^1],
2024-11-06T21:34:04,619           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,620           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,620           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' is explicitly added
2024-11-06T21:34:04,621           to the `packages` configuration field.

2024-11-06T21:34:04,622           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,623           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,623           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,624           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,625           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,627           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' to be distributed and are
2024-11-06T21:34:04,627           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' via
2024-11-06T21:34:04,628           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,628           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,628           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,629           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,630           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,632           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,632                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,633                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,634                 directory, all directories are treated like packages.
2024-11-06T21:34:04,634           ********************************************************************************

2024-11-06T21:34:04,635   !!
2024-11-06T21:34:04,636     check.warn(importable)
2024-11-06T21:34:04,637   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is absent from the `packages` configuration.
2024-11-06T21:34:04,637   !!

2024-11-06T21:34:04,638           ********************************************************************************
2024-11-06T21:34:04,638           ############################
2024-11-06T21:34:04,638           # Package would be ignored #
2024-11-06T21:34:04,639           ############################
2024-11-06T21:34:04,639           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' as an importable package[^1],
2024-11-06T21:34:04,639           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,640           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,641           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is explicitly added
2024-11-06T21:34:04,641           to the `packages` configuration field.

2024-11-06T21:34:04,642           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,643           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,643           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,644           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,645           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,646           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' to be distributed and are
2024-11-06T21:34:04,647           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' via
2024-11-06T21:34:04,647           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,648           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,649           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,650           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,651           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,653           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,653                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,654                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,654                 directory, all directories are treated like packages.
2024-11-06T21:34:04,655           ********************************************************************************

2024-11-06T21:34:04,656   !!
2024-11-06T21:34:04,656     check.warn(importable)
2024-11-06T21:34:04,657   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome' is absent from the `packages` configuration.
2024-11-06T21:34:04,657   !!

2024-11-06T21:34:04,658           ********************************************************************************
2024-11-06T21:34:04,658           ############################
2024-11-06T21:34:04,659           # Package would be ignored #
2024-11-06T21:34:04,659           ############################
2024-11-06T21:34:04,660           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome' as an importable package[^1],
2024-11-06T21:34:04,660           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,662           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,662           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome' is explicitly added
2024-11-06T21:34:04,663           to the `packages` configuration field.

2024-11-06T21:34:04,664           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,665           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,665           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,666           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,666           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,667           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome' to be distributed and are
2024-11-06T21:34:04,668           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome' via
2024-11-06T21:34:04,669           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,669           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,669           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,670           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,671           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,672           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,673                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,673                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,674                 directory, all directories are treated like packages.
2024-11-06T21:34:04,674           ********************************************************************************

2024-11-06T21:34:04,675   !!
2024-11-06T21:34:04,675     check.warn(importable)
2024-11-06T21:34:04,676   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is absent from the `packages` configuration.
2024-11-06T21:34:04,677   !!

2024-11-06T21:34:04,678           ********************************************************************************
2024-11-06T21:34:04,678           ############################
2024-11-06T21:34:04,679           # Package would be ignored #
2024-11-06T21:34:04,679           ############################
2024-11-06T21:34:04,680           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' as an importable package[^1],
2024-11-06T21:34:04,681           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,682           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,682           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is explicitly added
2024-11-06T21:34:04,682           to the `packages` configuration field.

2024-11-06T21:34:04,683           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,684           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,684           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,686           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,687           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,688           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' to be distributed and are
2024-11-06T21:34:04,689           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' via
2024-11-06T21:34:04,689           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,690           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,690           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,691           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,692           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,693           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,694                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,694                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,694                 directory, all directories are treated like packages.
2024-11-06T21:34:04,695           ********************************************************************************

2024-11-06T21:34:04,695   !!
2024-11-06T21:34:04,696     check.warn(importable)
2024-11-06T21:34:04,696   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is absent from the `packages` configuration.
2024-11-06T21:34:04,697   !!

2024-11-06T21:34:04,697           ********************************************************************************
2024-11-06T21:34:04,698           ############################
2024-11-06T21:34:04,698           # Package would be ignored #
2024-11-06T21:34:04,698           ############################
2024-11-06T21:34:04,699           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' as an importable package[^1],
2024-11-06T21:34:04,699           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,700           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,700           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is explicitly added
2024-11-06T21:34:04,701           to the `packages` configuration field.

2024-11-06T21:34:04,702           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,703           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,703           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,705           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,706           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,707           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' to be distributed and are
2024-11-06T21:34:04,707           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' via
2024-11-06T21:34:04,708           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,708           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,709           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,710           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,711           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,712           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,713                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,713                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,714                 directory, all directories are treated like packages.
2024-11-06T21:34:04,714           ********************************************************************************

2024-11-06T21:34:04,715   !!
2024-11-06T21:34:04,716     check.warn(importable)
2024-11-06T21:34:04,716   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is absent from the `packages` configuration.
2024-11-06T21:34:04,717   !!

2024-11-06T21:34:04,718           ********************************************************************************
2024-11-06T21:34:04,719           ############################
2024-11-06T21:34:04,719           # Package would be ignored #
2024-11-06T21:34:04,719           ############################
2024-11-06T21:34:04,720           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' as an importable package[^1],
2024-11-06T21:34:04,720           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,721           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,721           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is explicitly added
2024-11-06T21:34:04,722           to the `packages` configuration field.

2024-11-06T21:34:04,723           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,723           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,723           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,725           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,725           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,726           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' to be distributed and are
2024-11-06T21:34:04,726           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' via
2024-11-06T21:34:04,727           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,727           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,728           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,729           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,730           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,732           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,732                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,733                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,733                 directory, all directories are treated like packages.
2024-11-06T21:34:04,734           ********************************************************************************

2024-11-06T21:34:04,735   !!
2024-11-06T21:34:04,735     check.warn(importable)
2024-11-06T21:34:04,736   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is absent from the `packages` configuration.
2024-11-06T21:34:04,736   !!

2024-11-06T21:34:04,737           ********************************************************************************
2024-11-06T21:34:04,738           ############################
2024-11-06T21:34:04,738           # Package would be ignored #
2024-11-06T21:34:04,738           ############################
2024-11-06T21:34:04,739           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' as an importable package[^1],
2024-11-06T21:34:04,739           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,741           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,741           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is explicitly added
2024-11-06T21:34:04,742           to the `packages` configuration field.

2024-11-06T21:34:04,743           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,743           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,744           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,745           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,745           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,746           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' to be distributed and are
2024-11-06T21:34:04,746           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' via
2024-11-06T21:34:04,747           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,747           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,747           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,748           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,749           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,751           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,751                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,751                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,752                 directory, all directories are treated like packages.
2024-11-06T21:34:04,752           ********************************************************************************

2024-11-06T21:34:04,753   !!
2024-11-06T21:34:04,754     check.warn(importable)
2024-11-06T21:34:04,754   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is absent from the `packages` configuration.
2024-11-06T21:34:04,755   !!

2024-11-06T21:34:04,756           ********************************************************************************
2024-11-06T21:34:04,756           ############################
2024-11-06T21:34:04,756           # Package would be ignored #
2024-11-06T21:34:04,757           ############################
2024-11-06T21:34:04,758           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' as an importable package[^1],
2024-11-06T21:34:04,758           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,759           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,760           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is explicitly added
2024-11-06T21:34:04,760           to the `packages` configuration field.

2024-11-06T21:34:04,761           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,762           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,762           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,763           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,765           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,766           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' to be distributed and are
2024-11-06T21:34:04,766           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' via
2024-11-06T21:34:04,767           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,767           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,768           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,770           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,770           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,771           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,772                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,772                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,773                 directory, all directories are treated like packages.
2024-11-06T21:34:04,773           ********************************************************************************

2024-11-06T21:34:04,774   !!
2024-11-06T21:34:04,774     check.warn(importable)
2024-11-06T21:34:04,774   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is absent from the `packages` configuration.
2024-11-06T21:34:04,775   !!

2024-11-06T21:34:04,775           ********************************************************************************
2024-11-06T21:34:04,776           ############################
2024-11-06T21:34:04,776           # Package would be ignored #
2024-11-06T21:34:04,777           ############################
2024-11-06T21:34:04,777           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' as an importable package[^1],
2024-11-06T21:34:04,777           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,778           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,779           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is explicitly added
2024-11-06T21:34:04,779           to the `packages` configuration field.

2024-11-06T21:34:04,781           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,781           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,782           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,783           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,784           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,785           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' to be distributed and are
2024-11-06T21:34:04,786           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' via
2024-11-06T21:34:04,786           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,787           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,787           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,789           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,790           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,791           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,792                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,793                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,793                 directory, all directories are treated like packages.
2024-11-06T21:34:04,794           ********************************************************************************

2024-11-06T21:34:04,795   !!
2024-11-06T21:34:04,795     check.warn(importable)
2024-11-06T21:34:04,796   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is absent from the `packages` configuration.
2024-11-06T21:34:04,797   !!

2024-11-06T21:34:04,798           ********************************************************************************
2024-11-06T21:34:04,798           ############################
2024-11-06T21:34:04,799           # Package would be ignored #
2024-11-06T21:34:04,799           ############################
2024-11-06T21:34:04,799           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' as an importable package[^1],
2024-11-06T21:34:04,800           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,800           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,801           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is explicitly added
2024-11-06T21:34:04,801           to the `packages` configuration field.

2024-11-06T21:34:04,802           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,802           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,802           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,803           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,804           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,805           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' to be distributed and are
2024-11-06T21:34:04,805           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' via
2024-11-06T21:34:04,806           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,806           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,807           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,808           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,809           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,810           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,811                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,811                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,812                 directory, all directories are treated like packages.
2024-11-06T21:34:04,812           ********************************************************************************

2024-11-06T21:34:04,814   !!
2024-11-06T21:34:04,814     check.warn(importable)
2024-11-06T21:34:04,814   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is absent from the `packages` configuration.
2024-11-06T21:34:04,815   !!

2024-11-06T21:34:04,816           ********************************************************************************
2024-11-06T21:34:04,816           ############################
2024-11-06T21:34:04,817           # Package would be ignored #
2024-11-06T21:34:04,817           ############################
2024-11-06T21:34:04,818           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' as an importable package[^1],
2024-11-06T21:34:04,818           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,819           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,820           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is explicitly added
2024-11-06T21:34:04,820           to the `packages` configuration field.

2024-11-06T21:34:04,821           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,822           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,823           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,823           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,824           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,825           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' to be distributed and are
2024-11-06T21:34:04,825           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' via
2024-11-06T21:34:04,825           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,826           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,826           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,827           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,827           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,828           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,829                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,829                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,829                 directory, all directories are treated like packages.
2024-11-06T21:34:04,830           ********************************************************************************

2024-11-06T21:34:04,831   !!
2024-11-06T21:34:04,831     check.warn(importable)
2024-11-06T21:34:04,831   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is absent from the `packages` configuration.
2024-11-06T21:34:04,832   !!

2024-11-06T21:34:04,833           ********************************************************************************
2024-11-06T21:34:04,833           ############################
2024-11-06T21:34:04,834           # Package would be ignored #
2024-11-06T21:34:04,835           ############################
2024-11-06T21:34:04,835           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' as an importable package[^1],
2024-11-06T21:34:04,836           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,836           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,837           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is explicitly added
2024-11-06T21:34:04,837           to the `packages` configuration field.

2024-11-06T21:34:04,838           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,839           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,839           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,840           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,841           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,842           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' to be distributed and are
2024-11-06T21:34:04,843           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' via
2024-11-06T21:34:04,843           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,844           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,845           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,846           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,847           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,848           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,848                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,849                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,849                 directory, all directories are treated like packages.
2024-11-06T21:34:04,849           ********************************************************************************

2024-11-06T21:34:04,850   !!
2024-11-06T21:34:04,850     check.warn(importable)
2024-11-06T21:34:04,851   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is absent from the `packages` configuration.
2024-11-06T21:34:04,851   !!

2024-11-06T21:34:04,852           ********************************************************************************
2024-11-06T21:34:04,852           ############################
2024-11-06T21:34:04,852           # Package would be ignored #
2024-11-06T21:34:04,853           ############################
2024-11-06T21:34:04,853           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' as an importable package[^1],
2024-11-06T21:34:04,854           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,854           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,855           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is explicitly added
2024-11-06T21:34:04,855           to the `packages` configuration field.

2024-11-06T21:34:04,856           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,857           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,858           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,859           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,860           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,862           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' to be distributed and are
2024-11-06T21:34:04,862           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' via
2024-11-06T21:34:04,863           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,864           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,864           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,865           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,866           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,868           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,868                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,869                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,869                 directory, all directories are treated like packages.
2024-11-06T21:34:04,869           ********************************************************************************

2024-11-06T21:34:04,870   !!
2024-11-06T21:34:04,871     check.warn(importable)
2024-11-06T21:34:04,871   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is absent from the `packages` configuration.
2024-11-06T21:34:04,872   !!

2024-11-06T21:34:04,873           ********************************************************************************
2024-11-06T21:34:04,874           ############################
2024-11-06T21:34:04,875           # Package would be ignored #
2024-11-06T21:34:04,875           ############################
2024-11-06T21:34:04,875           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' as an importable package[^1],
2024-11-06T21:34:04,876           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,877           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,877           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is explicitly added
2024-11-06T21:34:04,877           to the `packages` configuration field.

2024-11-06T21:34:04,878           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,878           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,879           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,880           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,881           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,882           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' to be distributed and are
2024-11-06T21:34:04,882           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' via
2024-11-06T21:34:04,882           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,883           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,883           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,884           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,886           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,887           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,888                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,889                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,889                 directory, all directories are treated like packages.
2024-11-06T21:34:04,890           ********************************************************************************

2024-11-06T21:34:04,891   !!
2024-11-06T21:34:04,891     check.warn(importable)
2024-11-06T21:34:04,892   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is absent from the `packages` configuration.
2024-11-06T21:34:04,892   !!

2024-11-06T21:34:04,893           ********************************************************************************
2024-11-06T21:34:04,894           ############################
2024-11-06T21:34:04,894           # Package would be ignored #
2024-11-06T21:34:04,895           ############################
2024-11-06T21:34:04,895           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' as an importable package[^1],
2024-11-06T21:34:04,896           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,897           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,897           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is explicitly added
2024-11-06T21:34:04,898           to the `packages` configuration field.

2024-11-06T21:34:04,899           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,899           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,900           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,901           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,902           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,903           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' to be distributed and are
2024-11-06T21:34:04,903           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' via
2024-11-06T21:34:04,903           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,904           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,904           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,905           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,906           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,907           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,907                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,908                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,908                 directory, all directories are treated like packages.
2024-11-06T21:34:04,909           ********************************************************************************

2024-11-06T21:34:04,909   !!
2024-11-06T21:34:04,910     check.warn(importable)
2024-11-06T21:34:04,910   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is absent from the `packages` configuration.
2024-11-06T21:34:04,911   !!

2024-11-06T21:34:04,912           ********************************************************************************
2024-11-06T21:34:04,913           ############################
2024-11-06T21:34:04,913           # Package would be ignored #
2024-11-06T21:34:04,914           ############################
2024-11-06T21:34:04,914           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' as an importable package[^1],
2024-11-06T21:34:04,915           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,916           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,917           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is explicitly added
2024-11-06T21:34:04,917           to the `packages` configuration field.

2024-11-06T21:34:04,918           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,919           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,919           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,921           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,922           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,923           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' to be distributed and are
2024-11-06T21:34:04,923           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' via
2024-11-06T21:34:04,924           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,925           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,925           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,926           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,927           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,929           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,931                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,932                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,932                 directory, all directories are treated like packages.
2024-11-06T21:34:04,933           ********************************************************************************

2024-11-06T21:34:04,933   !!
2024-11-06T21:34:04,934     check.warn(importable)
2024-11-06T21:34:04,934   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is absent from the `packages` configuration.
2024-11-06T21:34:04,935   !!

2024-11-06T21:34:04,935           ********************************************************************************
2024-11-06T21:34:04,936           ############################
2024-11-06T21:34:04,936           # Package would be ignored #
2024-11-06T21:34:04,937           ############################
2024-11-06T21:34:04,937           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' as an importable package[^1],
2024-11-06T21:34:04,938           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,938           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,939           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is explicitly added
2024-11-06T21:34:04,939           to the `packages` configuration field.

2024-11-06T21:34:04,940           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,941           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,941           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,942           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,943           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,944           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' to be distributed and are
2024-11-06T21:34:04,945           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' via
2024-11-06T21:34:04,946           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,946           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,947           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,948           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,949           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,950           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,951                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,951                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,952                 directory, all directories are treated like packages.
2024-11-06T21:34:04,952           ********************************************************************************

2024-11-06T21:34:04,953   !!
2024-11-06T21:34:04,954     check.warn(importable)
2024-11-06T21:34:04,954   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is absent from the `packages` configuration.
2024-11-06T21:34:04,955   !!

2024-11-06T21:34:04,956           ********************************************************************************
2024-11-06T21:34:04,957           ############################
2024-11-06T21:34:04,958           # Package would be ignored #
2024-11-06T21:34:04,958           ############################
2024-11-06T21:34:04,959           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' as an importable package[^1],
2024-11-06T21:34:04,959           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,960           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,960           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is explicitly added
2024-11-06T21:34:04,960           to the `packages` configuration field.

2024-11-06T21:34:04,961           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,962           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,962           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,963           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,964           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,965           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' to be distributed and are
2024-11-06T21:34:04,965           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' via
2024-11-06T21:34:04,966           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,966           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,967           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,969           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,970           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,971           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,972                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,972                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,973                 directory, all directories are treated like packages.
2024-11-06T21:34:04,974           ********************************************************************************

2024-11-06T21:34:04,975   !!
2024-11-06T21:34:04,975     check.warn(importable)
2024-11-06T21:34:04,976   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is absent from the `packages` configuration.
2024-11-06T21:34:04,977   !!

2024-11-06T21:34:04,978           ********************************************************************************
2024-11-06T21:34:04,978           ############################
2024-11-06T21:34:04,979           # Package would be ignored #
2024-11-06T21:34:04,979           ############################
2024-11-06T21:34:04,979           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' as an importable package[^1],
2024-11-06T21:34:04,980           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,981           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:04,981           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is explicitly added
2024-11-06T21:34:04,982           to the `packages` configuration field.

2024-11-06T21:34:04,983           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:04,984           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:04,984           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:04,986           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:04,986           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:04,987           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' to be distributed and are
2024-11-06T21:34:04,987           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' via
2024-11-06T21:34:04,988           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:04,988           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:04,988           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:04,989           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:04,990           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:04,991           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:04,991                 even if it does not contain any `.py` files.
2024-11-06T21:34:04,991                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:04,992                 directory, all directories are treated like packages.
2024-11-06T21:34:04,992           ********************************************************************************

2024-11-06T21:34:04,993   !!
2024-11-06T21:34:04,993     check.warn(importable)
2024-11-06T21:34:04,994   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is absent from the `packages` configuration.
2024-11-06T21:34:04,994   !!

2024-11-06T21:34:04,995           ********************************************************************************
2024-11-06T21:34:04,996           ############################
2024-11-06T21:34:04,997           # Package would be ignored #
2024-11-06T21:34:04,997           ############################
2024-11-06T21:34:04,997           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' as an importable package[^1],
2024-11-06T21:34:04,998           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:04,999           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,000           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is explicitly added
2024-11-06T21:34:05,000           to the `packages` configuration field.

2024-11-06T21:34:05,001           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,002           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,002           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,003           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,005           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,006           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' to be distributed and are
2024-11-06T21:34:05,006           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' via
2024-11-06T21:34:05,007           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,007           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,008           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,009           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,010           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,012           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,012                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,013                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,013                 directory, all directories are treated like packages.
2024-11-06T21:34:05,014           ********************************************************************************

2024-11-06T21:34:05,014   !!
2024-11-06T21:34:05,015     check.warn(importable)
2024-11-06T21:34:05,015   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is absent from the `packages` configuration.
2024-11-06T21:34:05,016   !!

2024-11-06T21:34:05,017           ********************************************************************************
2024-11-06T21:34:05,017           ############################
2024-11-06T21:34:05,017           # Package would be ignored #
2024-11-06T21:34:05,018           ############################
2024-11-06T21:34:05,018           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' as an importable package[^1],
2024-11-06T21:34:05,019           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,019           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,020           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is explicitly added
2024-11-06T21:34:05,020           to the `packages` configuration field.

2024-11-06T21:34:05,021           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,022           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,022           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,024           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,025           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,026           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' to be distributed and are
2024-11-06T21:34:05,027           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' via
2024-11-06T21:34:05,027           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,028           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,028           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,030           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,031           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,032           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,033                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,033                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,034                 directory, all directories are treated like packages.
2024-11-06T21:34:05,034           ********************************************************************************

2024-11-06T21:34:05,035   !!
2024-11-06T21:34:05,036     check.warn(importable)
2024-11-06T21:34:05,037   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is absent from the `packages` configuration.
2024-11-06T21:34:05,037   !!

2024-11-06T21:34:05,038           ********************************************************************************
2024-11-06T21:34:05,039           ############################
2024-11-06T21:34:05,040           # Package would be ignored #
2024-11-06T21:34:05,040           ############################
2024-11-06T21:34:05,041           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' as an importable package[^1],
2024-11-06T21:34:05,041           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,042           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,042           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is explicitly added
2024-11-06T21:34:05,042           to the `packages` configuration field.

2024-11-06T21:34:05,043           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,043           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,044           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,044           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,045           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,046           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' to be distributed and are
2024-11-06T21:34:05,046           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' via
2024-11-06T21:34:05,047           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,047           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,047           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,049           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,050           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,051           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,052                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,052                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,053                 directory, all directories are treated like packages.
2024-11-06T21:34:05,053           ********************************************************************************

2024-11-06T21:34:05,054   !!
2024-11-06T21:34:05,055     check.warn(importable)
2024-11-06T21:34:05,055   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is absent from the `packages` configuration.
2024-11-06T21:34:05,056   !!

2024-11-06T21:34:05,057           ********************************************************************************
2024-11-06T21:34:05,058           ############################
2024-11-06T21:34:05,058           # Package would be ignored #
2024-11-06T21:34:05,059           ############################
2024-11-06T21:34:05,059           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' as an importable package[^1],
2024-11-06T21:34:05,060           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,061           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,062           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is explicitly added
2024-11-06T21:34:05,062           to the `packages` configuration field.

2024-11-06T21:34:05,063           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,064           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,065           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,066           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,067           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,068           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' to be distributed and are
2024-11-06T21:34:05,068           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' via
2024-11-06T21:34:05,069           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,069           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,070           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,070           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,071           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,075           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,076                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,080                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,082                 directory, all directories are treated like packages.
2024-11-06T21:34:05,082           ********************************************************************************

2024-11-06T21:34:05,083   !!
2024-11-06T21:34:05,084     check.warn(importable)
2024-11-06T21:34:05,085   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' is absent from the `packages` configuration.
2024-11-06T21:34:05,085   !!

2024-11-06T21:34:05,086           ********************************************************************************
2024-11-06T21:34:05,088           ############################
2024-11-06T21:34:05,090           # Package would be ignored #
2024-11-06T21:34:05,091           ############################
2024-11-06T21:34:05,092           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' as an importable package[^1],
2024-11-06T21:34:05,092           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,093           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,094           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' is explicitly added
2024-11-06T21:34:05,095           to the `packages` configuration field.

2024-11-06T21:34:05,096           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,096           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,097           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,098           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,099           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,101           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' to be distributed and are
2024-11-06T21:34:05,101           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' via
2024-11-06T21:34:05,102           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,103           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,103           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,105           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,106           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,108           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,108                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,109                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,109                 directory, all directories are treated like packages.
2024-11-06T21:34:05,110           ********************************************************************************

2024-11-06T21:34:05,111   !!
2024-11-06T21:34:05,112     check.warn(importable)
2024-11-06T21:34:05,112   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is absent from the `packages` configuration.
2024-11-06T21:34:05,113   !!

2024-11-06T21:34:05,114           ********************************************************************************
2024-11-06T21:34:05,114           ############################
2024-11-06T21:34:05,115           # Package would be ignored #
2024-11-06T21:34:05,115           ############################
2024-11-06T21:34:05,116           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' as an importable package[^1],
2024-11-06T21:34:05,117           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,117           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,118           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is explicitly added
2024-11-06T21:34:05,119           to the `packages` configuration field.

2024-11-06T21:34:05,119           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,120           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,120           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,121           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,122           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,123           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' to be distributed and are
2024-11-06T21:34:05,124           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' via
2024-11-06T21:34:05,124           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,125           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,125           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,126           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,127           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,129           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,129                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,130                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,131                 directory, all directories are treated like packages.
2024-11-06T21:34:05,131           ********************************************************************************

2024-11-06T21:34:05,132   !!
2024-11-06T21:34:05,133     check.warn(importable)
2024-11-06T21:34:05,134   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is absent from the `packages` configuration.
2024-11-06T21:34:05,134   !!

2024-11-06T21:34:05,135           ********************************************************************************
2024-11-06T21:34:05,136           ############################
2024-11-06T21:34:05,137           # Package would be ignored #
2024-11-06T21:34:05,137           ############################
2024-11-06T21:34:05,138           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' as an importable package[^1],
2024-11-06T21:34:05,139           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,139           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,140           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is explicitly added
2024-11-06T21:34:05,140           to the `packages` configuration field.

2024-11-06T21:34:05,141           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,142           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,142           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,143           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,144           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,145           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' to be distributed and are
2024-11-06T21:34:05,145           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' via
2024-11-06T21:34:05,146           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,146           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,147           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,148           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,149           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,150           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,151                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,151                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,152                 directory, all directories are treated like packages.
2024-11-06T21:34:05,153           ********************************************************************************

2024-11-06T21:34:05,153   !!
2024-11-06T21:34:05,154     check.warn(importable)
2024-11-06T21:34:05,154   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is absent from the `packages` configuration.
2024-11-06T21:34:05,155   !!

2024-11-06T21:34:05,156           ********************************************************************************
2024-11-06T21:34:05,157           ############################
2024-11-06T21:34:05,157           # Package would be ignored #
2024-11-06T21:34:05,158           ############################
2024-11-06T21:34:05,158           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' as an importable package[^1],
2024-11-06T21:34:05,159           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,160           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,160           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is explicitly added
2024-11-06T21:34:05,161           to the `packages` configuration field.

2024-11-06T21:34:05,162           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,162           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,163           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,164           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,165           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,166           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' to be distributed and are
2024-11-06T21:34:05,166           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' via
2024-11-06T21:34:05,167           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,167           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,168           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,169           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,169           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,171           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,171                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,172                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,173                 directory, all directories are treated like packages.
2024-11-06T21:34:05,173           ********************************************************************************

2024-11-06T21:34:05,174   !!
2024-11-06T21:34:05,175     check.warn(importable)
2024-11-06T21:34:05,175   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is absent from the `packages` configuration.
2024-11-06T21:34:05,176   !!

2024-11-06T21:34:05,177           ********************************************************************************
2024-11-06T21:34:05,177           ############################
2024-11-06T21:34:05,177           # Package would be ignored #
2024-11-06T21:34:05,178           ############################
2024-11-06T21:34:05,178           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' as an importable package[^1],
2024-11-06T21:34:05,179           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,180           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,180           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is explicitly added
2024-11-06T21:34:05,181           to the `packages` configuration field.

2024-11-06T21:34:05,182           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,183           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,183           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,184           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,185           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,186           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' to be distributed and are
2024-11-06T21:34:05,187           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' via
2024-11-06T21:34:05,187           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,188           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,188           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,189           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,191           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,193           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,193                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,194                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,195                 directory, all directories are treated like packages.
2024-11-06T21:34:05,195           ********************************************************************************

2024-11-06T21:34:05,196   !!
2024-11-06T21:34:05,197     check.warn(importable)
2024-11-06T21:34:05,198   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is absent from the `packages` configuration.
2024-11-06T21:34:05,198   !!

2024-11-06T21:34:05,199           ********************************************************************************
2024-11-06T21:34:05,200           ############################
2024-11-06T21:34:05,201           # Package would be ignored #
2024-11-06T21:34:05,201           ############################
2024-11-06T21:34:05,202           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' as an importable package[^1],
2024-11-06T21:34:05,202           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,203           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,204           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is explicitly added
2024-11-06T21:34:05,205           to the `packages` configuration field.

2024-11-06T21:34:05,206           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,207           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,207           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,209           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,210           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,211           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' to be distributed and are
2024-11-06T21:34:05,212           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' via
2024-11-06T21:34:05,213           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,213           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,214           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,215           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,217           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,219           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,220                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,221                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,222                 directory, all directories are treated like packages.
2024-11-06T21:34:05,222           ********************************************************************************

2024-11-06T21:34:05,223   !!
2024-11-06T21:34:05,224     check.warn(importable)
2024-11-06T21:34:05,225   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is absent from the `packages` configuration.
2024-11-06T21:34:05,226   !!

2024-11-06T21:34:05,228           ********************************************************************************
2024-11-06T21:34:05,229           ############################
2024-11-06T21:34:05,230           # Package would be ignored #
2024-11-06T21:34:05,230           ############################
2024-11-06T21:34:05,231           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' as an importable package[^1],
2024-11-06T21:34:05,232           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,234           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,234           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is explicitly added
2024-11-06T21:34:05,235           to the `packages` configuration field.

2024-11-06T21:34:05,236           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,237           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,237           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,238           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,239           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,241           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' to be distributed and are
2024-11-06T21:34:05,241           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' via
2024-11-06T21:34:05,242           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,242           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,243           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,245           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,246           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,248           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,249                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,250                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,250                 directory, all directories are treated like packages.
2024-11-06T21:34:05,251           ********************************************************************************

2024-11-06T21:34:05,252   !!
2024-11-06T21:34:05,253     check.warn(importable)
2024-11-06T21:34:05,253   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is absent from the `packages` configuration.
2024-11-06T21:34:05,254   !!

2024-11-06T21:34:05,255           ********************************************************************************
2024-11-06T21:34:05,256           ############################
2024-11-06T21:34:05,257           # Package would be ignored #
2024-11-06T21:34:05,257           ############################
2024-11-06T21:34:05,258           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' as an importable package[^1],
2024-11-06T21:34:05,258           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,260           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,261           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is explicitly added
2024-11-06T21:34:05,261           to the `packages` configuration field.

2024-11-06T21:34:05,263           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,263           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,264           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,265           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,267           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,268           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' to be distributed and are
2024-11-06T21:34:05,268           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' via
2024-11-06T21:34:05,269           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,269           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,270           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,271           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,272           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,274           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,274                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,275                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,275                 directory, all directories are treated like packages.
2024-11-06T21:34:05,276           ********************************************************************************

2024-11-06T21:34:05,277   !!
2024-11-06T21:34:05,278     check.warn(importable)
2024-11-06T21:34:05,278   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is absent from the `packages` configuration.
2024-11-06T21:34:05,279   !!

2024-11-06T21:34:05,280           ********************************************************************************
2024-11-06T21:34:05,281           ############################
2024-11-06T21:34:05,281           # Package would be ignored #
2024-11-06T21:34:05,282           ############################
2024-11-06T21:34:05,283           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' as an importable package[^1],
2024-11-06T21:34:05,283           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,285           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,286           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is explicitly added
2024-11-06T21:34:05,286           to the `packages` configuration field.

2024-11-06T21:34:05,287           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,288           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,289           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,290           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,291           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,292           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' to be distributed and are
2024-11-06T21:34:05,293           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' via
2024-11-06T21:34:05,294           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,294           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,295           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,296           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,297           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,299           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,300                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,300                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,301                 directory, all directories are treated like packages.
2024-11-06T21:34:05,302           ********************************************************************************

2024-11-06T21:34:05,303   !!
2024-11-06T21:34:05,303     check.warn(importable)
2024-11-06T21:34:05,304   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is absent from the `packages` configuration.
2024-11-06T21:34:05,305   !!

2024-11-06T21:34:05,306           ********************************************************************************
2024-11-06T21:34:05,306           ############################
2024-11-06T21:34:05,307           # Package would be ignored #
2024-11-06T21:34:05,307           ############################
2024-11-06T21:34:05,307           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' as an importable package[^1],
2024-11-06T21:34:05,308           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,309           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,309           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is explicitly added
2024-11-06T21:34:05,310           to the `packages` configuration field.

2024-11-06T21:34:05,310           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,311           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,311           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,313           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,314           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,315           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' to be distributed and are
2024-11-06T21:34:05,315           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' via
2024-11-06T21:34:05,316           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,316           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,317           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,317           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,319           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,320           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,321                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,321                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,322                 directory, all directories are treated like packages.
2024-11-06T21:34:05,322           ********************************************************************************

2024-11-06T21:34:05,323   !!
2024-11-06T21:34:05,324     check.warn(importable)
2024-11-06T21:34:05,324   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is absent from the `packages` configuration.
2024-11-06T21:34:05,325   !!

2024-11-06T21:34:05,326           ********************************************************************************
2024-11-06T21:34:05,326           ############################
2024-11-06T21:34:05,327           # Package would be ignored #
2024-11-06T21:34:05,327           ############################
2024-11-06T21:34:05,328           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' as an importable package[^1],
2024-11-06T21:34:05,329           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,330           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,330           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is explicitly added
2024-11-06T21:34:05,331           to the `packages` configuration field.

2024-11-06T21:34:05,331           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,332           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,333           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,334           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,334           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,336           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' to be distributed and are
2024-11-06T21:34:05,336           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' via
2024-11-06T21:34:05,337           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,337           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,338           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,339           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,340           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,342           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,342                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,343                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,343                 directory, all directories are treated like packages.
2024-11-06T21:34:05,344           ********************************************************************************

2024-11-06T21:34:05,345   !!
2024-11-06T21:34:05,346     check.warn(importable)
2024-11-06T21:34:05,346   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' is absent from the `packages` configuration.
2024-11-06T21:34:05,347   !!

2024-11-06T21:34:05,348           ********************************************************************************
2024-11-06T21:34:05,349           ############################
2024-11-06T21:34:05,349           # Package would be ignored #
2024-11-06T21:34:05,349           ############################
2024-11-06T21:34:05,350           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' as an importable package[^1],
2024-11-06T21:34:05,350           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,351           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,352           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' is explicitly added
2024-11-06T21:34:05,353           to the `packages` configuration field.

2024-11-06T21:34:05,354           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,354           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,355           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,356           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,357           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,358           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' to be distributed and are
2024-11-06T21:34:05,359           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' via
2024-11-06T21:34:05,359           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,360           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,360           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,361           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,362           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,363           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,364                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,364                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,365                 directory, all directories are treated like packages.
2024-11-06T21:34:05,365           ********************************************************************************

2024-11-06T21:34:05,366   !!
2024-11-06T21:34:05,367     check.warn(importable)
2024-11-06T21:34:05,367   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is absent from the `packages` configuration.
2024-11-06T21:34:05,367   !!

2024-11-06T21:34:05,369           ********************************************************************************
2024-11-06T21:34:05,369           ############################
2024-11-06T21:34:05,370           # Package would be ignored #
2024-11-06T21:34:05,370           ############################
2024-11-06T21:34:05,371           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' as an importable package[^1],
2024-11-06T21:34:05,371           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,372           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,373           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is explicitly added
2024-11-06T21:34:05,373           to the `packages` configuration field.

2024-11-06T21:34:05,374           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,375           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,375           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,377           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,378           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,379           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' to be distributed and are
2024-11-06T21:34:05,379           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' via
2024-11-06T21:34:05,380           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,380           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,381           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,382           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,383           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,386           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,386                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,387                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,387                 directory, all directories are treated like packages.
2024-11-06T21:34:05,389           ********************************************************************************

2024-11-06T21:34:05,390   !!
2024-11-06T21:34:05,390     check.warn(importable)
2024-11-06T21:34:05,390   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.scripts' is absent from the `packages` configuration.
2024-11-06T21:34:05,391   !!

2024-11-06T21:34:05,393           ********************************************************************************
2024-11-06T21:34:05,393           ############################
2024-11-06T21:34:05,393           # Package would be ignored #
2024-11-06T21:34:05,394           ############################
2024-11-06T21:34:05,394           Python recognizes 'SigProfilerMatrixGenerator.scripts' as an importable package[^1],
2024-11-06T21:34:05,395           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,396           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,397           package, please make sure that 'SigProfilerMatrixGenerator.scripts' is explicitly added
2024-11-06T21:34:05,398           to the `packages` configuration field.

2024-11-06T21:34:05,399           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,400           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,401           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,402           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,403           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,404           If you don't want 'SigProfilerMatrixGenerator.scripts' to be distributed and are
2024-11-06T21:34:05,405           already explicitly excluding 'SigProfilerMatrixGenerator.scripts' via
2024-11-06T21:34:05,406           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,406           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,407           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,408           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,409           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,410           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,411                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,411                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,412                 directory, all directories are treated like packages.
2024-11-06T21:34:05,413           ********************************************************************************

2024-11-06T21:34:05,414   !!
2024-11-06T21:34:05,414     check.warn(importable)
2024-11-06T21:34:05,415   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SigProfilerMatrixGenerator.scripts.Benchmark' is absent from the `packages` configuration.
2024-11-06T21:34:05,415   !!

2024-11-06T21:34:05,416           ********************************************************************************
2024-11-06T21:34:05,417           ############################
2024-11-06T21:34:05,417           # Package would be ignored #
2024-11-06T21:34:05,418           ############################
2024-11-06T21:34:05,418           Python recognizes 'SigProfilerMatrixGenerator.scripts.Benchmark' as an importable package[^1],
2024-11-06T21:34:05,419           but it is absent from setuptools' `packages` configuration.

2024-11-06T21:34:05,420           This leads to an ambiguous overall configuration. If you want to distribute this
2024-11-06T21:34:05,421           package, please make sure that 'SigProfilerMatrixGenerator.scripts.Benchmark' is explicitly added
2024-11-06T21:34:05,422           to the `packages` configuration field.

2024-11-06T21:34:05,422           Alternatively, you can also rely on setuptools' discovery methods
2024-11-06T21:34:05,423           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-11-06T21:34:05,423           instead of `find_packages(...)`/`find:`).

2024-11-06T21:34:05,425           You can read more about "package discovery" on setuptools documentation page:

2024-11-06T21:34:05,425           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-11-06T21:34:05,426           If you don't want 'SigProfilerMatrixGenerator.scripts.Benchmark' to be distributed and are
2024-11-06T21:34:05,427           already explicitly excluding 'SigProfilerMatrixGenerator.scripts.Benchmark' via
2024-11-06T21:34:05,427           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-11-06T21:34:05,428           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-11-06T21:34:05,429           combination with a more fine grained `package-data` configuration.

2024-11-06T21:34:05,429           You can read more about "package data files" on setuptools documentation page:

2024-11-06T21:34:05,430           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-11-06T21:34:05,432           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-11-06T21:34:05,433                 even if it does not contain any `.py` files.
2024-11-06T21:34:05,433                 On the other hand, currently there is no concept of package data
2024-11-06T21:34:05,434                 directory, all directories are treated like packages.
2024-11-06T21:34:05,434           ********************************************************************************

2024-11-06T21:34:05,435   !!
2024-11-06T21:34:05,436     check.warn(importable)
2024-11-06T21:34:05,436   creating build/lib/SigProfilerMatrixGenerator/controllers
2024-11-06T21:34:05,437   copying SigProfilerMatrixGenerator/controllers/__init__.py -> build/lib/SigProfilerMatrixGenerator/controllers
2024-11-06T21:34:05,437   copying SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/lib/SigProfilerMatrixGenerator/controllers
2024-11-06T21:34:05,438   creating build/lib/SigProfilerMatrixGenerator/references/CNV
2024-11-06T21:34:05,438   copying SigProfilerMatrixGenerator/references/CNV/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-11-06T21:34:05,439   copying SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-11-06T21:34:05,439   copying SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-11-06T21:34:05,440   creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-11-06T21:34:05,440   copying SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-11-06T21:34:05,441   copying SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-11-06T21:34:05,441   creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_output
2024-11-06T21:34:05,442   copying SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_output
2024-11-06T21:34:05,442   creating build/lib/SigProfilerMatrixGenerator/references/SV
2024-11-06T21:34:05,445   copying SigProfilerMatrixGenerator/references/SV/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/SV
2024-11-06T21:34:05,446   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input
2024-11-06T21:34:05,447   copying SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input
2024-11-06T21:34:05,448   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,448   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,452   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,453   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,454   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,455   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,455   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,456   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,456   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,457   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,458   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,458   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,459   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,460   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,461   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,461   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,462   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,463   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,463   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,464   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,465   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,465   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,466   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,473   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,473   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,479   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,483   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,493   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,495   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,497   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,497   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,498   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,498   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,499   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,499   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,500   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,501   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,501   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,502   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,502   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,503   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,503   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,504   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,505   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,505   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,506   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,507   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,507   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,510   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,521   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,533   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:05,533   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,534   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,534   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,535   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,536   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,537   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,537   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,537   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,538   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,538   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,539   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,539   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,539   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,540   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,540   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,541   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,542   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,542   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,543   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,543   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,544   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,545   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,545   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,546   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,546   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,547   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,547   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,548   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,549   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,549   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,549   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,550   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,550   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,551   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,551   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,552   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,552   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,553   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,554   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,554   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,555   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,555   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,556   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,557   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,558   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,558   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,559   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,559   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,560   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,561   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,562   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:05,562   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,563   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,563   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.purple.sv.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,563   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,564   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,564   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,565   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,565   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,566   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,566   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,567   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,567   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,568   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,568   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,569   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:05,569   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,570   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,570   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,571   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,572   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,573   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,573   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,575   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,577   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,586   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,593   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,595   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,597   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,600   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,602   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,605   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,607   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,609   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,613   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,617   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,619   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,621   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,624   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,627   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,630   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,638   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,646   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,648   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,651   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,654   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,656   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,659   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,661   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,664   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,668   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,673   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,675   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,678   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,681   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,685   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,687   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,696   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,703   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,706   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,709   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,711   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,714   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,717   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,719   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,722   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,726   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,730   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,733   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,736   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,739   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,743   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,745   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,754   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,760   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,763   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,766   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,768   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,770   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,773   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,775   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,777   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,781   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,784   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,786   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,789   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,795   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,798   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,800   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,807   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,813   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,815   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,818   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,820   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,823   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,826   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,828   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,831   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,833   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,838   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,841   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,843   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,846   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,850   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,855   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,863   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,869   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,872   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,875   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,877   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,880   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,883   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,887   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,892   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,897   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,913   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,929   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,956   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,975   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,977   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,980   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,982   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,985   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,988   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,992   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,995   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:05,999   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,002   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,005   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,009   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,013   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,017   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,020   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,023   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,027   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,030   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,038   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,047   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,057   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,068   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,071   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,074   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,077   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,080   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,084   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,089   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,095   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,099   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,114   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,137   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,167   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,194   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,196   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,199   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,202   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,204   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,207   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,211   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,214   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,217   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,219   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,222   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,225   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,228   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,231   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,233   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,236   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,238   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,242   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,247   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,253   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,259   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,261   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,264   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,266   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,268   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,271   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,274   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,278   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,281   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,294   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,308   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,331   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,346   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,349   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,351   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,353   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,355   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,358   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,361   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,364   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,366   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,369   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,372   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,375   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,377   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,379   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,382   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,385   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,390   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,395   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,402   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,408   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,410   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,412   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,414   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,417   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,420   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,423   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,426   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,429   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,440   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,450   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,465   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,482   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,484   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,486   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,489   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,491   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,494   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,498   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,501   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,504   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,507   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,510   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,513   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,516   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,519   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,522   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,525   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,527   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,533   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,538   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,544   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,550   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,553   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,555   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,558   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,561   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,564   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,568   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,571   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,574   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,585   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,596   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,612   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,627   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,630   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,632   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,634   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,637   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,640   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,643   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,646   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,650   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,654   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,661   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,664   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,667   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,670   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,688   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,690   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,694   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,697   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:06,699   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-11-06T21:34:06,701   copying SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-11-06T21:34:06,703   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-11-06T21:34:06,705   copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-11-06T21:34:06,959   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-11-06T21:34:06,960   copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-11-06T21:34:07,034   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-11-06T21:34:07,035   copying SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-11-06T21:34:07,231   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-11-06T21:34:07,233   copying SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-11-06T21:34:07,298   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-11-06T21:34:07,299   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-11-06T21:34:07,302   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-11-06T21:34:07,305   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-11-06T21:34:07,308   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-11-06T21:34:07,309   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-11-06T21:34:07,403   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-11-06T21:34:07,404   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-11-06T21:34:07,478   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-11-06T21:34:07,479   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-11-06T21:34:07,550   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-11-06T21:34:07,551   copying SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-11-06T21:34:07,911   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-11-06T21:34:07,913   copying SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-11-06T21:34:07,919   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-11-06T21:34:07,920   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-11-06T21:34:07,922   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,923   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,930   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,940   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,948   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,952   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,958   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,964   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,971   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,980   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,985   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:07,994   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,007   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,011   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,015   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,021   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,032   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,042   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,055   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,063   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,071   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,078   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,084   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,090   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,092   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,099   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:08,101   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,102   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,109   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,118   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,126   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,130   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,137   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,143   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,150   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,160   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,164   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,174   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,185   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,190   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,194   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,199   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,210   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,219   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,225   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,231   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,239   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,247   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,253   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,259   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,261   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,268   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:08,271   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:08,272   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:08,281   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:08,289   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:08,297   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:08,305   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:08,307   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:08,317   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:08,325   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,327   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,330   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,334   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,337   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,341   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,344   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,347   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,351   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,355   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,358   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,361   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,367   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,371   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,374   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,377   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,381   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,384   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,387   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,391   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,394   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,398   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,401   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,406   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,410   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,413   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,417   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,420   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,423   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,427   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,430   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,434   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,437   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,440   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,444   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,448   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,453   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,457   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,461   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,465   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:08,470   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-11-06T21:34:08,471   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-11-06T21:34:08,475   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,476   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,484   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,494   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,499   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,507   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,514   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,521   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,528   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,536   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,541   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,546   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,554   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,566   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,573   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,582   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,593   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,602   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,615   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,623   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,632   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,635   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,642   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:08,645   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,646   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,653   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,661   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,667   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,674   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,682   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,689   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,695   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,704   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,710   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,717   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,765   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,775   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,782   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,789   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,799   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,807   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,818   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,866   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,877   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,884   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:08,887   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,889   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,899   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,914   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,919   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,925   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,931   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,937   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,943   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,951   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,955   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,961   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,971   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,984   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:08,991   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:09,001   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:09,010   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:09,018   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:09,029   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:09,036   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:09,046   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:09,049   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:09,059   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:09,062   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,064   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,071   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,076   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,081   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,087   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,092   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,097   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,102   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,107   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,111   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,115   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,126   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,131   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,138   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,148   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,156   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,163   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,169   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,176   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,182   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,188   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,191   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,196   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:09,199   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,201   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,212   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,218   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,224   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,231   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,237   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,242   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,247   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,252   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,257   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,261   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,273   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,278   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,286   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,296   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,306   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,315   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,321   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,328   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,334   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,340   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,343   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,350   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:09,352   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,354   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,357   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,361   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,365   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,368   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,371   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,374   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,377   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,381   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,385   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,388   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,392   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,395   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,399   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,402   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,406   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,409   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:09,412   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-11-06T21:34:09,414   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-11-06T21:34:09,415   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,417   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,421   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,425   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,428   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,431   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,434   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,437   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,441   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,444   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,447   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,450   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,454   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,458   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,461   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,464   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,467   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,471   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,474   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,477   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,481   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,484   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,487   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,490   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,493   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:09,495   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,497   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,500   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,504   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,507   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,510   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,513   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,516   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,519   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,522   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,525   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,529   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,533   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,537   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,539   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,542   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,547   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,550   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,553   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,557   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,560   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,564   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,569   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,572   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,576   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:09,578   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:09,580   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:09,585   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:09,590   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:09,595   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:09,600   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:09,603   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:09,609   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:09,614   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,615   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,619   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,622   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,626   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,629   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,633   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,636   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,640   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,643   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,646   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,649   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,654   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,657   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,661   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,664   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,667   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,670   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,674   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,677   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,681   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,685   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,688   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,691   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,695   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,698   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,701   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,704   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,706   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,709   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,712   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,715   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,717   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,721   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,724   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,738   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,741   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,745   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,748   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,751   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:09,754   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,756   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,767   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,785   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,788   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,796   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,800   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,803   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,806   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,810   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,813   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,816   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,820   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,824   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,828   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,832   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,835   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,839   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,843   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,847   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,850   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,854   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:09,857   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,858   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,861   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,866   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,869   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,872   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,875   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,878   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,881   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,885   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,888   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,891   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,894   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,898   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,901   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,905   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,909   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,913   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,917   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,920   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,923   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,927   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:09,930   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,931   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,934   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,938   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,942   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,947   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,951   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,955   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,959   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,966   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,970   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,975   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,980   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,986   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,990   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,995   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:09,999   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:10,004   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:10,010   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:10,015   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:10,019   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:10,023   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:10,026   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,028   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,035   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,039   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,043   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,047   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,050   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,054   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,059   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,063   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,067   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,071   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,079   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,084   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,090   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,096   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,102   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,107   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,112   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,118   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,123   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,128   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,131   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,136   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:10,139   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,142   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,147   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,150   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,154   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,158   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,161   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,165   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,169   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,173   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,177   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,180   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,186   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,190   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,195   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,200   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,205   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,210   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,214   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,218   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,223   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,227   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,230   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,234   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:10,237   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,238   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,241   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,245   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,249   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,252   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,255   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,258   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,262   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,265   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,268   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,271   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,274   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,278   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,281   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,284   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,287   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:10,290   creating build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,291   copying SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,294   copying SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,301   copying SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,305   copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,309   copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,311   copying SigProfilerMatrixGenerator/scripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,314   copying SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,318   copying SigProfilerMatrixGenerator/scripts/ref_install.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,320   copying SigProfilerMatrixGenerator/scripts/reference_genome_manager.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,323   copying SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,326   copying SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,329   copying SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,333   copying SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,336   copying SigProfilerMatrixGenerator/scripts/vcfToBedpe.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:10,339   creating build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:10,340   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:10,345   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:10,347   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:10,352   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:10,354   copying SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:10,356   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:10,360   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:10,362   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:10,366   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:10,398   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-11-06T21:34:10,398   !!

2024-11-06T21:34:10,399           ********************************************************************************
2024-11-06T21:34:10,400           Please avoid running ``setup.py`` directly.
2024-11-06T21:34:10,400           Instead, use pypa/build, pypa/installer or other
2024-11-06T21:34:10,401           standards-based tools.

2024-11-06T21:34:10,402           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-11-06T21:34:10,402           ********************************************************************************

2024-11-06T21:34:10,403   !!
2024-11-06T21:34:10,404     self.initialize_options()
2024-11-06T21:34:10,425   installing to build/bdist.linux-armv7l/wheel
2024-11-06T21:34:10,425   running install
2024-11-06T21:34:10,450   running install_lib
2024-11-06T21:34:10,478   creating build/bdist.linux-armv7l/wheel
2024-11-06T21:34:10,480   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-11-06T21:34:10,482   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references
2024-11-06T21:34:10,483   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV
2024-11-06T21:34:10,485   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input
2024-11-06T21:34:10,488   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,489   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,492   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,495   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,496   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,498   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,500   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,504   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,506   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,508   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,510   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,513   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,515   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,516   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,518   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,520   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,522   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,525   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,527   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,529   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,530   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,534   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,535   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,538   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,539   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,541   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,544   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,547   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,549   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,551   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,554   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,555   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,557   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,559   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,561   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,563   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,565   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,567   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,569   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,572   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,574   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,576   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,579   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,582   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,584   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,587   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,589   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,592   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,594   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,596   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,598   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-11-06T21:34:10,602   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,603   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,605   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,607   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,609   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,612   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,614   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,616   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,618   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,620   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,622   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,624   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,627   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,629   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,630   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,633   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,635   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,638   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,640   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,642   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,644   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,647   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,649   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,652   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,654   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,656   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,658   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,661   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,663   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,666   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,668   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,670   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,672   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,674   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,676   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,678   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,681   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,683   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,685   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,687   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,689   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,691   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,695   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,697   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,699   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,701   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,704   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,706   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,708   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,709   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,711   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-11-06T21:34:10,713   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input
2024-11-06T21:34:10,716   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,717   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,719   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,721   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,723   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,725   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,727   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,729   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.vcf -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,763   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,766   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,772   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.vcf -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,775   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.vcf -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,777   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,811   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.purple.sv.vcf -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,817   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.vcf -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-11-06T21:34:10,819   copying build/lib/SigProfilerMatrixGenerator/references/SV/.DS_Store -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/SV
2024-11-06T21:34:10,822   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes
2024-11-06T21:34:10,824   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-11-06T21:34:10,826   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-11-06T21:34:10,827   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-11-06T21:34:10,920   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-11-06T21:34:10,921   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-11-06T21:34:11,007   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-11-06T21:34:11,009   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-11-06T21:34:11,081   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-11-06T21:34:11,082   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-11-06T21:34:11,084   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-11-06T21:34:11,086   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-11-06T21:34:11,089   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-11-06T21:34:11,090   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-11-06T21:34:11,284   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-11-06T21:34:11,285   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-11-06T21:34:11,354   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome
2024-11-06T21:34:11,356   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-11-06T21:34:11,358   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-11-06T21:34:11,426   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-11-06T21:34:11,428   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-11-06T21:34:11,682   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-11-06T21:34:11,683   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-11-06T21:34:12,035   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-11-06T21:34:12,036   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-11-06T21:34:12,043   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-11-06T21:34:12,045   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,047   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,054   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,060   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,065   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,072   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,077   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,083   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,089   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,094   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,099   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,105   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,113   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,123   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,129   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,135   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,140   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,145   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,154   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,161   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,167   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,170   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-11-06T21:34:12,178   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,179   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,188   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,196   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,204   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,209   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,215   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,219   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,222   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,227   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,233   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,245   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,251   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,257   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,263   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,270   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,274   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,278   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,285   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,291   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,298   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,308   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,312   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,320   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,327   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,329   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-11-06T21:34:12,340   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,342   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,353   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,360   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,366   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,373   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,378   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,380   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,386   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,392   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,397   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,403   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,410   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,418   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,429   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,434   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,445   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,451   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,457   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,469   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,475   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,483   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,485   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-11-06T21:34:12,527   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-11-06T21:34:12,529   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-11-06T21:34:12,532   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:12,533   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:12,547   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:12,555   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:12,563   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:12,571   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:12,579   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:12,585   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-11-06T21:34:12,588   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,590   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,601   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,607   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,611   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,618   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,622   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,624   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,629   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,635   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,640   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,645   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,650   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,658   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,670   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,676   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,685   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,690   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,695   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,703   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,710   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,717   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,719   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-11-06T21:34:12,725   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-11-06T21:34:12,728   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,729   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,732   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,736   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,739   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,742   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,745   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,747   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,751   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,755   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,758   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,761   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,764   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,766   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,769   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,772   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,775   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,778   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,781   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,785   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,789   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,793   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,795   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,799   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,802   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,805   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,808   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,812   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,815   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,818   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,821   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,824   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,828   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,831   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,835   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,838   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,842   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,845   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,848   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,852   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-11-06T21:34:12,856   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,858   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,870   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,878   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,888   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,894   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,901   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,906   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,909   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,915   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,921   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,934   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,942   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,950   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,958   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,972   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,976   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,982   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,987   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:12,992   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:13,001   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:13,012   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:13,016   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:13,024   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:13,030   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:13,033   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-11-06T21:34:13,044   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,045   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,050   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,057   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,061   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,068   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,074   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,076   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,082   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,093   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,099   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,105   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,114   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,123   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,132   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,139   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,144   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,153   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,161   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,167   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,174   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,178   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,184   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,186   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-11-06T21:34:13,198   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,199   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,203   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,210   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,214   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,218   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,221   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,223   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,227   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,232   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,236   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,240   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,246   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,250   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,255   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,258   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,262   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,267   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,270   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,274   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,280   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,284   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,289   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,291   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-11-06T21:34:13,302   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,303   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,306   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,309   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,311   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,314   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,317   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,320   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,322   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,326   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,329   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,332   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,336   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,339   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,342   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,345   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,348   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,351   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-11-06T21:34:13,354   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-11-06T21:34:13,357   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,358   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,362   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,366   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,370   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,373   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,377   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,382   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,385   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,389   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,393   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,396   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,400   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,403   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,407   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,411   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,414   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,418   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,421   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,425   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,429   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,432   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-11-06T21:34:13,436   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,438   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,441   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,444   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,447   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,450   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,452   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,455   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,458   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,462   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,464   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,467   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,470   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,473   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,476   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,480   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,483   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,486   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,489   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,493   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,496   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,499   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,501   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,504   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,507   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-11-06T21:34:13,511   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,512   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,515   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,518   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,521   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,523   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,526   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,530   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,533   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,537   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,540   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,543   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,547   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,550   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,553   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,556   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,559   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,564   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,567   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,570   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,574   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,577   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-11-06T21:34:13,581   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:13,582   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:13,587   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:13,593   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:13,595   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:13,600   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:13,606   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:13,611   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-11-06T21:34:13,618   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,619   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,623   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,627   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,630   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,633   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,638   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,642   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,646   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,649   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,655   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,659   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,662   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,666   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,669   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,674   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,677   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,681   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,685   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,688   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,692   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,695   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-11-06T21:34:13,699   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-11-06T21:34:13,702   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,704   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,706   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,709   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,711   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,713   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,716   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,719   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,721   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,723   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,726   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,729   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,731   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,734   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,737   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,740   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,742   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,745   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,748   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,752   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,755   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,757   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,760   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,763   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,766   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,769   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,772   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,774   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,777   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,780   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,783   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,786   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,788   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,795   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,798   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,800   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,803   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,805   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,807   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,810   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-11-06T21:34:13,813   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,814   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,817   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,819   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,822   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,826   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,828   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,831   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,834   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,837   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,840   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,843   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,846   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,849   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,852   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,855   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,858   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:13,861   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:14,084   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:14,090   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:14,094   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:14,099   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:14,103   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:14,108   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:14,114   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-11-06T21:34:14,122   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,124   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,128   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,132   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,137   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,140   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,144   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,149   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,154   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,158   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,163   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,167   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,171   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,176   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,186   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,190   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,196   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,199   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,204   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,208   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,210   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,214   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,219   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,223   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-11-06T21:34:14,227   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,228   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,231   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,234   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,237   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,239   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,242   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,245   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,248   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,250   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,254   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,256   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,259   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,262   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,266   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,270   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,274   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,277   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,280   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,283   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,285   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,288   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,292   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,295   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-11-06T21:34:14,298   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,300   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,302   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,305   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,307   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,309   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,311   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,314   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,317   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,319   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,322   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,325   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,327   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,330   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,333   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,336   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,338   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-11-06T21:34:14,346   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,347   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,350   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,354   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,358   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,361   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,369   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,371   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,375   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,378   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,380   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,382   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,388   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,392   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,394   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,398   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,401   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,404   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,415   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,420   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,422   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,425   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,427   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,430   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,433   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,435   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,445   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,471   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,478   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,481   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,483   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,486   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,488   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,492   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,494   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,496   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,509   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,511   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,513   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,515   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,517   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,519   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,521   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,523   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,526   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,530   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,533   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,535   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,537   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,540   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,542   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,544   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,546   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,549   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,552   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,571   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,574   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,588   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,590   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,592   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,598   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,600   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,602   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,604   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,606   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,610   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,611   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,613   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,623   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,628   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,634   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,635   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,638   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,639   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,657   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,660   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,664   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,666   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,668   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,670   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,672   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,674   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,676   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,683   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,685   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,687   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,688   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,691   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,693   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,695   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,697   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,699   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,701   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,705   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,724   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,733   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,735   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,741   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,744   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,748   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,750   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,752   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,754   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,756   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,759   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,763   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,765   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,767   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,773   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,778   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,780   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,790   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,792   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,794   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,796   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,807   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,809   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,812   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,817   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,819   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,821   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,824   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,826   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,829   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,831   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,834   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,835   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,848   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,850   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,852   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,854   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,857   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,859   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,861   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,863   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,866   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,868   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,870   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,886   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,889   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,891   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,905   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,907   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,910   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,913   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,917   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,923   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,926   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,938   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,946   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,950   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,953   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,956   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,960   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,967   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,970   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,981   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,986   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,989   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,993   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,995   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:14,998   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,001   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,008   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,029   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,032   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,034   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,049   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,063   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,065   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,069   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,071   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,073   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,075   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,077   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,081   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,082   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,084   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,097   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,100   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,103   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,106   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,109   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,111   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,135   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,138   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,140   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,163   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,167   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,170   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,172   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,174   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,177   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,179   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,182   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,184   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,186   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,189   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,195   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,211   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,214   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,216   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,218   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,221   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,237   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,239   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,242   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,245   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,248   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,251   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,254   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,257   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,259   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,263   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,266   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,271   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,274   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,276   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,278   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,282   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,285   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,287   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,290   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,293   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,296   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,298   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,305   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,306   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,308   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,311   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,314   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,316   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,322   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,324   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,332   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,335   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,338   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,340   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,346   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,348   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,351   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,353   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,355   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,358   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,360   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,363   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,367   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,371   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-11-06T21:34:15,378   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV
2024-11-06T21:34:15,380   copying build/lib/SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV
2024-11-06T21:34:15,383   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_output
2024-11-06T21:34:15,385   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV/example_output
2024-11-06T21:34:15,389   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2024-11-06T21:34:15,390   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV/example_input
2024-11-06T21:34:15,399   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV/example_input
2024-11-06T21:34:15,422   copying build/lib/SigProfilerMatrixGenerator/references/CNV/.DS_Store -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV
2024-11-06T21:34:15,425   copying build/lib/SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/references/CNV
2024-11-06T21:34:15,428   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/controllers
2024-11-06T21:34:15,429   copying build/lib/SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/controllers
2024-11-06T21:34:15,432   copying build/lib/SigProfilerMatrixGenerator/controllers/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/controllers
2024-11-06T21:34:15,434   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,436   copying build/lib/SigProfilerMatrixGenerator/scripts/ref_install.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,438   copying build/lib/SigProfilerMatrixGenerator/scripts/reference_genome_manager.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,441   copying build/lib/SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,444   copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,449   copying build/lib/SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,454   copying build/lib/SigProfilerMatrixGenerator/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,456   copying build/lib/SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,460   copying build/lib/SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,463   copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,465   copying build/lib/SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,469   copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,471   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:15,473   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:15,475   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:15,477   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:15,482   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:15,486   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:15,489   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:15,491   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:15,493   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:15,497   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts/Benchmark
2024-11-06T21:34:15,498   copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,500   copying build/lib/SigProfilerMatrixGenerator/scripts/vcfToBedpe.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,503   copying build/lib/SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator/scripts
2024-11-06T21:34:15,505   copying build/lib/SigProfilerMatrixGenerator/version.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator
2024-11-06T21:34:15,507   copying build/lib/SigProfilerMatrixGenerator/__init__.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator
2024-11-06T21:34:15,509   copying build/lib/SigProfilerMatrixGenerator/install.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator
2024-11-06T21:34:15,512   copying build/lib/SigProfilerMatrixGenerator/test_helpers.py -> build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator
2024-11-06T21:34:15,514   running install_egg_info
2024-11-06T21:34:15,549   Copying SigProfilerMatrixGenerator.egg-info to build/bdist.linux-armv7l/wheel/./SigProfilerMatrixGenerator-1.2.31-py3.11.egg-info
2024-11-06T21:34:15,566   running install_scripts
2024-11-06T21:34:15,585   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator-1.2.31.dist-info/WHEEL
2024-11-06T21:34:15,588   creating '/tmp/pip-wheel-nw6cttdr/SigProfilerMatrixGenerator-1.2.31-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-11-06T21:34:15,590   adding 'SigProfilerMatrixGenerator/__init__.py'
2024-11-06T21:34:15,593   adding 'SigProfilerMatrixGenerator/install.py'
2024-11-06T21:34:15,595   adding 'SigProfilerMatrixGenerator/test_helpers.py'
2024-11-06T21:34:15,596   adding 'SigProfilerMatrixGenerator/version.py'
2024-11-06T21:34:15,598   adding 'SigProfilerMatrixGenerator/controllers/__init__.py'
2024-11-06T21:34:15,600   adding 'SigProfilerMatrixGenerator/controllers/cli_controller.py'
2024-11-06T21:34:15,602   adding 'SigProfilerMatrixGenerator/references/CNV/.DS_Store'
2024-11-06T21:34:15,604   adding 'SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv'
2024-11-06T21:34:15,605   adding 'SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt'
2024-11-06T21:34:15,745   adding 'SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv'
2024-11-06T21:34:15,847   adding 'SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv'
2024-11-06T21:34:15,852   adding 'SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv'
2024-11-06T21:34:15,854   adding 'SigProfilerMatrixGenerator/references/SV/.DS_Store'
2024-11-06T21:34:15,856   adding 'SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store'
2024-11-06T21:34:15,861   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,863   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,864   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,865   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,867   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,868   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,869   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,872   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,874   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,877   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,879   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,881   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,884   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,886   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,888   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,889   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,890   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,891   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,893   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,894   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,897   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,898   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,900   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,901   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,903   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,905   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,910   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,912   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,915   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,916   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,918   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,919   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,922   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,923   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,925   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,929   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,931   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,933   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,937   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,938   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,943   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,945   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,948   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,950   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,952   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,953   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,954   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,956   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,957   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,959   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv'
2024-11-06T21:34:15,961   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv'
2024-11-06T21:34:15,964   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv'
2024-11-06T21:34:15,965   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv'
2024-11-06T21:34:15,967   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv'
2024-11-06T21:34:15,968   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv'
2024-11-06T21:34:15,969   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv'
2024-11-06T21:34:15,970   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv'
2024-11-06T21:34:15,971   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv'
2024-11-06T21:34:15,973   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv'
2024-11-06T21:34:15,974   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv'
2024-11-06T21:34:15,975   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv'
2024-11-06T21:34:15,978   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv'
2024-11-06T21:34:15,980   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv'
2024-11-06T21:34:15,982   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv'
2024-11-06T21:34:15,985   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv'
2024-11-06T21:34:15,987   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv'
2024-11-06T21:34:15,989   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv'
2024-11-06T21:34:15,991   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv'
2024-11-06T21:34:15,992   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv'
2024-11-06T21:34:15,995   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv'
2024-11-06T21:34:15,997   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv'
2024-11-06T21:34:15,998   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv'
2024-11-06T21:34:15,999   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv'
2024-11-06T21:34:16,001   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv'
2024-11-06T21:34:16,003   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv'
2024-11-06T21:34:16,005   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv'
2024-11-06T21:34:16,010   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv'
2024-11-06T21:34:16,013   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv'
2024-11-06T21:34:16,015   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv'
2024-11-06T21:34:16,016   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv'
2024-11-06T21:34:16,017   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv'
2024-11-06T21:34:16,019   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv'
2024-11-06T21:34:16,020   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv'
2024-11-06T21:34:16,022   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv'
2024-11-06T21:34:16,024   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv'
2024-11-06T21:34:16,026   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv'
2024-11-06T21:34:16,027   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv'
2024-11-06T21:34:16,037   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv'
2024-11-06T21:34:16,038   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv'
2024-11-06T21:34:16,040   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv'
2024-11-06T21:34:16,041   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv'
2024-11-06T21:34:16,043   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv'
2024-11-06T21:34:16,045   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv'
2024-11-06T21:34:16,046   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv'
2024-11-06T21:34:16,047   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv'
2024-11-06T21:34:16,048   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv'
2024-11-06T21:34:16,049   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv'
2024-11-06T21:34:16,052   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv'
2024-11-06T21:34:16,054   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv'
2024-11-06T21:34:16,055   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv'
2024-11-06T21:34:16,078   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.bedpe.tsv'
2024-11-06T21:34:16,105   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.purple.sv.vcf'
2024-11-06T21:34:16,108   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe'
2024-11-06T21:34:16,109   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe.tsv'
2024-11-06T21:34:16,111   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.vcf'
2024-11-06T21:34:16,112   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe'
2024-11-06T21:34:16,259   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe.tsv'
2024-11-06T21:34:16,429   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.vcf'
2024-11-06T21:34:16,444   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe'
2024-11-06T21:34:16,445   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe.tsv'
2024-11-06T21:34:16,447   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.vcf'
2024-11-06T21:34:16,448   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe'
2024-11-06T21:34:16,449   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe.tsv'
2024-11-06T21:34:16,451   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.vcf'
2024-11-06T21:34:16,482   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv'
2024-11-06T21:34:16,505   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv'
2024-11-06T21:34:16,507   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv'
2024-11-06T21:34:16,508   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv'
2024-11-06T21:34:16,512   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv'
2024-11-06T21:34:16,516   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv'
2024-11-06T21:34:16,517   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv'
2024-11-06T21:34:16,624   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv'
2024-11-06T21:34:16,726   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv'
2024-11-06T21:34:16,729   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv'
2024-11-06T21:34:16,730   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv'
2024-11-06T21:34:16,732   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv'
2024-11-06T21:34:16,733   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv'
2024-11-06T21:34:16,735   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv'
2024-11-06T21:34:16,736   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv'
2024-11-06T21:34:16,737   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv'
2024-11-06T21:34:16,763   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv'
2024-11-06T21:34:16,786   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv'
2024-11-06T21:34:16,787   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv'
2024-11-06T21:34:16,788   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv'
2024-11-06T21:34:16,793   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv'
2024-11-06T21:34:16,796   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv'
2024-11-06T21:34:16,798   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv'
2024-11-06T21:34:16,905   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv'
2024-11-06T21:34:17,016   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv'
2024-11-06T21:34:17,018   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv'
2024-11-06T21:34:17,020   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv'
2024-11-06T21:34:17,022   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv'
2024-11-06T21:34:17,023   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv'
2024-11-06T21:34:17,025   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv'
2024-11-06T21:34:17,026   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv'
2024-11-06T21:34:17,027   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv'
2024-11-06T21:34:17,051   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv'
2024-11-06T21:34:17,070   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv'
2024-11-06T21:34:17,072   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv'
2024-11-06T21:34:17,073   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv'
2024-11-06T21:34:17,077   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv'
2024-11-06T21:34:17,080   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv'
2024-11-06T21:34:17,081   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv'
2024-11-06T21:34:17,172   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv'
2024-11-06T21:34:17,261   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv'
2024-11-06T21:34:17,263   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv'
2024-11-06T21:34:17,265   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv'
2024-11-06T21:34:17,266   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv'
2024-11-06T21:34:17,267   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv'
2024-11-06T21:34:17,269   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv'
2024-11-06T21:34:17,270   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv'
2024-11-06T21:34:17,271   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv'
2024-11-06T21:34:17,294   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv'
2024-11-06T21:34:17,313   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv'
2024-11-06T21:34:17,315   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv'
2024-11-06T21:34:17,316   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv'
2024-11-06T21:34:17,320   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv'
2024-11-06T21:34:17,323   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv'
2024-11-06T21:34:17,325   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv'
2024-11-06T21:34:17,415   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv'
2024-11-06T21:34:17,503   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv'
2024-11-06T21:34:17,506   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv'
2024-11-06T21:34:17,507   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv'
2024-11-06T21:34:17,509   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv'
2024-11-06T21:34:17,510   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv'
2024-11-06T21:34:17,512   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv'
2024-11-06T21:34:17,513   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv'
2024-11-06T21:34:17,515   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv'
2024-11-06T21:34:17,538   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv'
2024-11-06T21:34:17,559   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv'
2024-11-06T21:34:17,560   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv'
2024-11-06T21:34:17,561   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv'
2024-11-06T21:34:17,565   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv'
2024-11-06T21:34:17,569   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv'
2024-11-06T21:34:17,570   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv'
2024-11-06T21:34:17,666   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv'
2024-11-06T21:34:17,760   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv'
2024-11-06T21:34:17,763   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv'
2024-11-06T21:34:17,764   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv'
2024-11-06T21:34:17,766   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv'
2024-11-06T21:34:17,778   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv'
2024-11-06T21:34:17,781   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv'
2024-11-06T21:34:17,782   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv'
2024-11-06T21:34:17,784   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv'
2024-11-06T21:34:17,785   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv'
2024-11-06T21:34:17,848   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv'
2024-11-06T21:34:17,850   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv'
2024-11-06T21:34:17,851   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv'
2024-11-06T21:34:17,852   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv'
2024-11-06T21:34:17,887   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv'
2024-11-06T21:34:17,924   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv'
2024-11-06T21:34:17,990   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv'
2024-11-06T21:34:18,059   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv'
2024-11-06T21:34:18,063   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv'
2024-11-06T21:34:18,064   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv'
2024-11-06T21:34:18,066   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv'
2024-11-06T21:34:18,067   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv'
2024-11-06T21:34:18,076   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv'
2024-11-06T21:34:18,086   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv'
2024-11-06T21:34:18,101   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv'
2024-11-06T21:34:18,117   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv'
2024-11-06T21:34:18,269   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv'
2024-11-06T21:34:18,416   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv'
2024-11-06T21:34:18,689   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv'
2024-11-06T21:34:18,944   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv'
2024-11-06T21:34:18,952   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv'
2024-11-06T21:34:18,953   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv'
2024-11-06T21:34:18,954   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv'
2024-11-06T21:34:18,955   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv'
2024-11-06T21:34:18,957   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv'
2024-11-06T21:34:18,960   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv'
2024-11-06T21:34:18,963   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv'
2024-11-06T21:34:18,966   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv'
2024-11-06T21:34:18,968   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv'
2024-11-06T21:34:18,971   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv'
2024-11-06T21:34:18,973   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv'
2024-11-06T21:34:18,976   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv'
2024-11-06T21:34:18,978   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv'
2024-11-06T21:34:18,980   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv'
2024-11-06T21:34:18,981   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv'
2024-11-06T21:34:18,983   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv'
2024-11-06T21:34:18,985   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv'
2024-11-06T21:34:19,020   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv'
2024-11-06T21:34:19,089   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv'
2024-11-06T21:34:19,154   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv'
2024-11-06T21:34:19,220   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv'
2024-11-06T21:34:19,224   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv'
2024-11-06T21:34:19,225   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv'
2024-11-06T21:34:19,227   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv'
2024-11-06T21:34:19,228   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv'
2024-11-06T21:34:19,236   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv'
2024-11-06T21:34:19,252   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv'
2024-11-06T21:34:19,267   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv'
2024-11-06T21:34:19,276   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv'
2024-11-06T21:34:19,423   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv'
2024-11-06T21:34:19,570   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv'
2024-11-06T21:34:19,840   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv'
2024-11-06T21:34:20,097   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv'
2024-11-06T21:34:20,104   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv'
2024-11-06T21:34:20,106   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv'
2024-11-06T21:34:20,107   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv'
2024-11-06T21:34:20,108   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv'
2024-11-06T21:34:20,111   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv'
2024-11-06T21:34:20,114   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv'
2024-11-06T21:34:20,117   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv'
2024-11-06T21:34:20,121   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv'
2024-11-06T21:34:20,123   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv'
2024-11-06T21:34:20,126   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv'
2024-11-06T21:34:20,128   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv'
2024-11-06T21:34:20,131   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv'
2024-11-06T21:34:20,133   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv'
2024-11-06T21:34:20,134   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv'
2024-11-06T21:34:20,136   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv'
2024-11-06T21:34:20,138   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv'
2024-11-06T21:34:20,168   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv'
2024-11-06T21:34:20,198   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv'
2024-11-06T21:34:20,255   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv'
2024-11-06T21:34:20,313   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv'
2024-11-06T21:34:20,316   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv'
2024-11-06T21:34:20,317   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv'
2024-11-06T21:34:20,319   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv'
2024-11-06T21:34:20,320   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv'
2024-11-06T21:34:20,328   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv'
2024-11-06T21:34:20,335   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv'
2024-11-06T21:34:20,348   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv'
2024-11-06T21:34:20,355   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv'
2024-11-06T21:34:20,483   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv'
2024-11-06T21:34:20,611   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv'
2024-11-06T21:34:20,846   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv'
2024-11-06T21:34:21,069   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv'
2024-11-06T21:34:21,077   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv'
2024-11-06T21:34:21,078   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv'
2024-11-06T21:34:21,079   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv'
2024-11-06T21:34:21,082   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv'
2024-11-06T21:34:21,084   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv'
2024-11-06T21:34:21,087   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv'
2024-11-06T21:34:21,090   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv'
2024-11-06T21:34:21,092   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv'
2024-11-06T21:34:21,095   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv'
2024-11-06T21:34:21,097   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv'
2024-11-06T21:34:21,100   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv'
2024-11-06T21:34:21,102   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv'
2024-11-06T21:34:21,104   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv'
2024-11-06T21:34:21,105   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv'
2024-11-06T21:34:21,107   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv'
2024-11-06T21:34:21,138   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv'
2024-11-06T21:34:21,169   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv'
2024-11-06T21:34:21,226   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv'
2024-11-06T21:34:21,284   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv'
2024-11-06T21:34:21,287   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv'
2024-11-06T21:34:21,288   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv'
2024-11-06T21:34:21,290   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv'
2024-11-06T21:34:21,292   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv'
2024-11-06T21:34:21,298   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv'
2024-11-06T21:34:21,305   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv'
2024-11-06T21:34:21,318   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv'
2024-11-06T21:34:21,325   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv'
2024-11-06T21:34:21,452   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv'
2024-11-06T21:34:21,580   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv'
2024-11-06T21:34:21,813   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv'
2024-11-06T21:34:22,037   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv'
2024-11-06T21:34:22,044   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv'
2024-11-06T21:34:22,046   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv'
2024-11-06T21:34:22,047   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv'
2024-11-06T21:34:22,048   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv'
2024-11-06T21:34:22,051   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv'
2024-11-06T21:34:22,053   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv'
2024-11-06T21:34:22,056   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv'
2024-11-06T21:34:22,059   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv'
2024-11-06T21:34:22,061   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv'
2024-11-06T21:34:22,064   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv'
2024-11-06T21:34:22,066   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv'
2024-11-06T21:34:22,069   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv'
2024-11-06T21:34:22,070   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv'
2024-11-06T21:34:22,072   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv'
2024-11-06T21:34:22,073   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv'
2024-11-06T21:34:22,075   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv'
2024-11-06T21:34:22,107   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv'
2024-11-06T21:34:22,140   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv'
2024-11-06T21:34:22,174   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv'
2024-11-06T21:34:22,209   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv'
2024-11-06T21:34:22,211   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv'
2024-11-06T21:34:22,213   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv'
2024-11-06T21:34:22,214   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv'
2024-11-06T21:34:22,216   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv'
2024-11-06T21:34:22,223   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv'
2024-11-06T21:34:22,230   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv'
2024-11-06T21:34:22,238   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv'
2024-11-06T21:34:22,245   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv'
2024-11-06T21:34:22,375   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv'
2024-11-06T21:34:22,513   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv'
2024-11-06T21:34:22,652   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv'
2024-11-06T21:34:22,795   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv'
2024-11-06T21:34:22,799   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv'
2024-11-06T21:34:22,801   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv'
2024-11-06T21:34:22,802   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv'
2024-11-06T21:34:22,804   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv'
2024-11-06T21:34:22,806   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv'
2024-11-06T21:34:22,808   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv'
2024-11-06T21:34:22,811   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv'
2024-11-06T21:34:22,813   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv'
2024-11-06T21:34:22,821   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt'
2024-11-06T21:34:22,866   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv'
2024-11-06T21:34:22,874   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv'
2024-11-06T21:34:22,876   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv'
2024-11-06T21:34:22,885   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv'
2024-11-06T21:34:23,053   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv'
2024-11-06T21:34:23,059   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv'
2024-11-06T21:34:23,061   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv'
2024-11-06T21:34:23,064   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv'
2024-11-06T21:34:23,065   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv'
2024-11-06T21:34:23,067   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py'
2024-11-06T21:34:25,830   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list'
2024-11-06T21:34:26,898   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list'
2024-11-06T21:34:28,203   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list'
2024-11-06T21:34:29,102   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list'
2024-11-06T21:34:29,132   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list'
2024-11-06T21:34:29,134   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt'
2024-11-06T21:34:29,136   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv'
2024-11-06T21:34:30,018   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list'
2024-11-06T21:34:30,929   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list'
2024-11-06T21:34:31,839   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list'
2024-11-06T21:34:34,151   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list'
2024-11-06T21:34:34,351   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list'
2024-11-06T21:34:34,354   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py'
2024-11-06T21:34:34,376   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt'
2024-11-06T21:34:34,419   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt'
2024-11-06T21:34:34,462   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt'
2024-11-06T21:34:34,473   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt'
2024-11-06T21:34:34,497   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt'
2024-11-06T21:34:34,519   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt'
2024-11-06T21:34:34,551   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt'
2024-11-06T21:34:34,594   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt'
2024-11-06T21:34:34,607   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt'
2024-11-06T21:34:34,659   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt'
2024-11-06T21:34:34,721   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt'
2024-11-06T21:34:34,739   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt'
2024-11-06T21:34:34,746   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt'
2024-11-06T21:34:34,761   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt'
2024-11-06T21:34:34,806   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt'
2024-11-06T21:34:34,847   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt'
2024-11-06T21:34:34,874   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt'
2024-11-06T21:34:34,903   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt'
2024-11-06T21:34:34,934   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt'
2024-11-06T21:34:34,965   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt'
2024-11-06T21:34:34,991   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt'
2024-11-06T21:34:35,013   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt'
2024-11-06T21:34:35,016   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt'
2024-11-06T21:34:35,037   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt'
2024-11-06T21:34:35,040   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt'
2024-11-06T21:34:35,062   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt'
2024-11-06T21:34:35,107   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt'
2024-11-06T21:34:35,149   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt'
2024-11-06T21:34:35,161   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt'
2024-11-06T21:34:35,184   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt'
2024-11-06T21:34:35,206   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt'
2024-11-06T21:34:35,238   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt'
2024-11-06T21:34:35,281   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt'
2024-11-06T21:34:35,295   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt'
2024-11-06T21:34:35,346   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt'
2024-11-06T21:34:35,408   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt'
2024-11-06T21:34:35,427   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt'
2024-11-06T21:34:35,435   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt'
2024-11-06T21:34:35,449   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt'
2024-11-06T21:34:35,494   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt'
2024-11-06T21:34:35,537   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt'
2024-11-06T21:34:35,565   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt'
2024-11-06T21:34:35,595   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt'
2024-11-06T21:34:35,627   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt'
2024-11-06T21:34:35,659   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt'
2024-11-06T21:34:35,685   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt'
2024-11-06T21:34:35,708   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt'
2024-11-06T21:34:35,710   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt'
2024-11-06T21:34:35,733   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt'
2024-11-06T21:34:35,736   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt'
2024-11-06T21:34:35,770   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt'
2024-11-06T21:34:35,814   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt'
2024-11-06T21:34:35,861   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt'
2024-11-06T21:34:35,900   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt'
2024-11-06T21:34:35,903   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt'
2024-11-06T21:34:35,961   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt'
2024-11-06T21:34:35,998   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt'
2024-11-06T21:34:36,008   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt'
2024-11-06T21:34:36,014   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt'
2024-11-06T21:34:36,020   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt'
2024-11-06T21:34:36,025   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt'
2024-11-06T21:34:36,029   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt'
2024-11-06T21:34:36,034   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt'
2024-11-06T21:34:36,039   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt'
2024-11-06T21:34:36,045   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt'
2024-11-06T21:34:36,054   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt'
2024-11-06T21:34:36,056   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt'
2024-11-06T21:34:36,070   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt'
2024-11-06T21:34:36,080   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt'
2024-11-06T21:34:36,086   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt'
2024-11-06T21:34:36,089   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt'
2024-11-06T21:34:36,093   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt'
2024-11-06T21:34:36,098   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt'
2024-11-06T21:34:36,103   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt'
2024-11-06T21:34:36,108   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt'
2024-11-06T21:34:36,114   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt'
2024-11-06T21:34:36,118   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt'
2024-11-06T21:34:36,121   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt'
2024-11-06T21:34:36,129   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt'
2024-11-06T21:34:36,134   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt'
2024-11-06T21:34:36,137   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt'
2024-11-06T21:34:36,140   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt'
2024-11-06T21:34:36,143   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt'
2024-11-06T21:34:36,145   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt'
2024-11-06T21:34:36,148   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt'
2024-11-06T21:34:36,150   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt'
2024-11-06T21:34:36,153   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt'
2024-11-06T21:34:36,155   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt'
2024-11-06T21:34:36,161   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt'
2024-11-06T21:34:36,167   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt'
2024-11-06T21:34:36,179   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt'
2024-11-06T21:34:36,188   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt'
2024-11-06T21:34:36,196   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt'
2024-11-06T21:34:36,203   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt'
2024-11-06T21:34:36,215   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt'
2024-11-06T21:34:36,225   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt'
2024-11-06T21:34:36,227   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt'
2024-11-06T21:34:36,251   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt'
2024-11-06T21:34:36,286   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt'
2024-11-06T21:34:36,302   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt'
2024-11-06T21:34:36,321   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt'
2024-11-06T21:34:36,340   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt'
2024-11-06T21:34:36,359   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt'
2024-11-06T21:34:36,375   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt'
2024-11-06T21:34:36,398   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt'
2024-11-06T21:34:36,409   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt'
2024-11-06T21:34:36,423   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt'
2024-11-06T21:34:36,451   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt'
2024-11-06T21:34:36,494   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt'
2024-11-06T21:34:36,519   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt'
2024-11-06T21:34:36,549   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt'
2024-11-06T21:34:36,581   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt'
2024-11-06T21:34:36,609   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt'
2024-11-06T21:34:36,657   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt'
2024-11-06T21:34:36,682   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt'
2024-11-06T21:34:36,711   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt'
2024-11-06T21:34:36,714   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt'
2024-11-06T21:34:36,732   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt'
2024-11-06T21:34:36,736   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt'
2024-11-06T21:34:36,760   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt'
2024-11-06T21:34:36,796   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt'
2024-11-06T21:34:36,813   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt'
2024-11-06T21:34:36,831   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt'
2024-11-06T21:34:36,850   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt'
2024-11-06T21:34:36,870   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt'
2024-11-06T21:34:36,886   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt'
2024-11-06T21:34:36,911   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt'
2024-11-06T21:34:36,924   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt'
2024-11-06T21:34:36,940   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt'
2024-11-06T21:34:36,969   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt'
2024-11-06T21:34:37,013   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt'
2024-11-06T21:34:37,039   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt'
2024-11-06T21:34:37,069   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt'
2024-11-06T21:34:37,101   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt'
2024-11-06T21:34:37,129   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt'
2024-11-06T21:34:37,178   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt'
2024-11-06T21:34:37,204   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt'
2024-11-06T21:34:37,234   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt'
2024-11-06T21:34:37,254   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt'
2024-11-06T21:34:37,258   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt'
2024-11-06T21:34:37,286   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt'
2024-11-06T21:34:37,345   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt'
2024-11-06T21:34:37,367   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt'
2024-11-06T21:34:37,387   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt'
2024-11-06T21:34:37,409   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt'
2024-11-06T21:34:37,431   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt'
2024-11-06T21:34:37,454   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt'
2024-11-06T21:34:37,487   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt'
2024-11-06T21:34:37,501   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt'
2024-11-06T21:34:37,519   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt'
2024-11-06T21:34:37,556   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt'
2024-11-06T21:34:37,624   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt'
2024-11-06T21:34:37,660   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt'
2024-11-06T21:34:37,710   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt'
2024-11-06T21:34:37,756   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt'
2024-11-06T21:34:37,793   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt'
2024-11-06T21:34:37,850   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt'
2024-11-06T21:34:37,882   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt'
2024-11-06T21:34:37,915   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt'
2024-11-06T21:34:37,918   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt'
2024-11-06T21:34:37,944   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt'
2024-11-06T21:34:37,947   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt'
2024-11-06T21:34:37,967   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt'
2024-11-06T21:34:37,975   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt'
2024-11-06T21:34:37,983   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt'
2024-11-06T21:34:37,991   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt'
2024-11-06T21:34:38,000   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt'
2024-11-06T21:34:38,009   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt'
2024-11-06T21:34:38,016   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt'
2024-11-06T21:34:38,024   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt'
2024-11-06T21:34:38,030   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt'
2024-11-06T21:34:38,037   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt'
2024-11-06T21:34:38,072   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt'
2024-11-06T21:34:38,082   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt'
2024-11-06T21:34:38,100   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt'
2024-11-06T21:34:38,122   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt'
2024-11-06T21:34:38,140   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt'
2024-11-06T21:34:38,157   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt'
2024-11-06T21:34:38,170   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt'
2024-11-06T21:34:38,186   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt'
2024-11-06T21:34:38,202   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt'
2024-11-06T21:34:38,213   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt'
2024-11-06T21:34:38,215   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt'
2024-11-06T21:34:38,225   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt'
2024-11-06T21:34:38,227   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt'
2024-11-06T21:34:38,259   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt'
2024-11-06T21:34:38,274   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt'
2024-11-06T21:34:38,288   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt'
2024-11-06T21:34:38,303   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt'
2024-11-06T21:34:38,318   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt'
2024-11-06T21:34:38,334   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt'
2024-11-06T21:34:38,347   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt'
2024-11-06T21:34:38,362   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt'
2024-11-06T21:34:38,374   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt'
2024-11-06T21:34:38,385   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt'
2024-11-06T21:34:38,446   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt'
2024-11-06T21:34:38,463   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt'
2024-11-06T21:34:38,496   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt'
2024-11-06T21:34:38,532   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt'
2024-11-06T21:34:38,565   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt'
2024-11-06T21:34:38,594   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt'
2024-11-06T21:34:38,617   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt'
2024-11-06T21:34:38,646   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt'
2024-11-06T21:34:38,672   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt'
2024-11-06T21:34:38,691   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt'
2024-11-06T21:34:38,693   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt'
2024-11-06T21:34:38,713   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt'
2024-11-06T21:34:38,715   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt'
2024-11-06T21:34:38,718   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt'
2024-11-06T21:34:38,722   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt'
2024-11-06T21:34:38,728   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt'
2024-11-06T21:34:38,731   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt'
2024-11-06T21:34:38,733   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt'
2024-11-06T21:34:38,734   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt'
2024-11-06T21:34:38,737   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt'
2024-11-06T21:34:38,741   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt'
2024-11-06T21:34:38,743   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt'
2024-11-06T21:34:38,746   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt'
2024-11-06T21:34:38,750   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt'
2024-11-06T21:34:38,755   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt'
2024-11-06T21:34:38,759   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt'
2024-11-06T21:34:38,762   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt'
2024-11-06T21:34:38,766   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt'
2024-11-06T21:34:38,771   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt'
2024-11-06T21:34:38,775   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt'
2024-11-06T21:34:38,777   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py'
2024-11-06T21:34:38,784   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt'
2024-11-06T21:34:38,795   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt'
2024-11-06T21:34:38,804   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt'
2024-11-06T21:34:38,807   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt'
2024-11-06T21:34:38,813   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt'
2024-11-06T21:34:38,817   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt'
2024-11-06T21:34:38,824   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt'
2024-11-06T21:34:38,834   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt'
2024-11-06T21:34:38,836   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt'
2024-11-06T21:34:38,848   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt'
2024-11-06T21:34:38,870   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt'
2024-11-06T21:34:38,874   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt'
2024-11-06T21:34:38,877   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt'
2024-11-06T21:34:38,880   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt'
2024-11-06T21:34:38,893   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt'
2024-11-06T21:34:38,903   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt'
2024-11-06T21:34:38,910   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt'
2024-11-06T21:34:38,918   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt'
2024-11-06T21:34:38,928   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt'
2024-11-06T21:34:38,936   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt'
2024-11-06T21:34:38,942   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt'
2024-11-06T21:34:38,950   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt'
2024-11-06T21:34:38,957   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt'
2024-11-06T21:34:38,959   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt'
2024-11-06T21:34:38,965   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt'
2024-11-06T21:34:38,976   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt'
2024-11-06T21:34:38,985   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt'
2024-11-06T21:34:38,988   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt'
2024-11-06T21:34:38,992   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt'
2024-11-06T21:34:38,997   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt'
2024-11-06T21:34:39,003   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt'
2024-11-06T21:34:39,012   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt'
2024-11-06T21:34:39,015   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt'
2024-11-06T21:34:39,026   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt'
2024-11-06T21:34:39,047   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt'
2024-11-06T21:34:39,051   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt'
2024-11-06T21:34:39,054   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt'
2024-11-06T21:34:39,057   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt'
2024-11-06T21:34:39,069   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt'
2024-11-06T21:34:39,080   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt'
2024-11-06T21:34:39,086   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt'
2024-11-06T21:34:39,095   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt'
2024-11-06T21:34:39,104   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt'
2024-11-06T21:34:39,112   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt'
2024-11-06T21:34:39,118   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt'
2024-11-06T21:34:39,125   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt'
2024-11-06T21:34:39,133   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt'
2024-11-06T21:34:39,134   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt'
2024-11-06T21:34:39,157   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt'
2024-11-06T21:34:39,188   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt'
2024-11-06T21:34:39,218   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt'
2024-11-06T21:34:39,245   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt'
2024-11-06T21:34:39,247   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt'
2024-11-06T21:34:39,295   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt'
2024-11-06T21:34:39,323   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt'
2024-11-06T21:34:39,329   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt'
2024-11-06T21:34:39,333   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt'
2024-11-06T21:34:39,337   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt'
2024-11-06T21:34:39,341   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt'
2024-11-06T21:34:39,344   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt'
2024-11-06T21:34:39,347   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt'
2024-11-06T21:34:39,351   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt'
2024-11-06T21:34:39,356   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt'
2024-11-06T21:34:39,361   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt'
2024-11-06T21:34:39,364   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt'
2024-11-06T21:34:39,375   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt'
2024-11-06T21:34:39,383   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt'
2024-11-06T21:34:39,387   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt'
2024-11-06T21:34:39,390   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt'
2024-11-06T21:34:39,393   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt'
2024-11-06T21:34:39,397   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt'
2024-11-06T21:34:39,400   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt'
2024-11-06T21:34:39,403   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt'
2024-11-06T21:34:39,407   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt'
2024-11-06T21:34:39,411   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt'
2024-11-06T21:34:39,412   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt'
2024-11-06T21:34:39,418   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt'
2024-11-06T21:34:39,421   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt'
2024-11-06T21:34:39,424   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt'
2024-11-06T21:34:39,426   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt'
2024-11-06T21:34:39,428   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt'
2024-11-06T21:34:39,430   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt'
2024-11-06T21:34:39,432   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt'
2024-11-06T21:34:39,434   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt'
2024-11-06T21:34:39,437   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt'
2024-11-06T21:34:39,439   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt'
2024-11-06T21:34:39,442   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt'
2024-11-06T21:34:39,447   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt'
2024-11-06T21:34:39,454   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt'
2024-11-06T21:34:39,462   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt'
2024-11-06T21:34:39,467   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt'
2024-11-06T21:34:39,471   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt'
2024-11-06T21:34:39,481   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt'
2024-11-06T21:34:39,488   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt'
2024-11-06T21:34:39,498   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt'
2024-11-06T21:34:39,512   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt'
2024-11-06T21:34:39,518   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt'
2024-11-06T21:34:39,524   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt'
2024-11-06T21:34:39,532   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt'
2024-11-06T21:34:39,538   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt'
2024-11-06T21:34:39,543   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt'
2024-11-06T21:34:39,552   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt'
2024-11-06T21:34:39,555   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt'
2024-11-06T21:34:39,561   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt'
2024-11-06T21:34:39,572   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt'
2024-11-06T21:34:39,592   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt'
2024-11-06T21:34:39,601   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt'
2024-11-06T21:34:39,615   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt'
2024-11-06T21:34:39,627   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt'
2024-11-06T21:34:39,638   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt'
2024-11-06T21:34:39,658   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt'
2024-11-06T21:34:39,667   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt'
2024-11-06T21:34:39,678   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt'
2024-11-06T21:34:39,687   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt'
2024-11-06T21:34:39,689   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt'
2024-11-06T21:34:39,699   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt'
2024-11-06T21:34:39,713   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt'
2024-11-06T21:34:39,718   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt'
2024-11-06T21:34:39,725   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt'
2024-11-06T21:34:39,732   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt'
2024-11-06T21:34:39,738   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt'
2024-11-06T21:34:39,744   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt'
2024-11-06T21:34:39,752   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt'
2024-11-06T21:34:39,756   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt'
2024-11-06T21:34:39,761   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt'
2024-11-06T21:34:39,773   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt'
2024-11-06T21:34:39,792   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt'
2024-11-06T21:34:39,802   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt'
2024-11-06T21:34:39,816   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt'
2024-11-06T21:34:39,828   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt'
2024-11-06T21:34:39,839   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt'
2024-11-06T21:34:39,859   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt'
2024-11-06T21:34:39,869   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt'
2024-11-06T21:34:39,880   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt'
2024-11-06T21:34:39,888   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt'
2024-11-06T21:34:39,891   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt'
2024-11-06T21:34:39,900   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt'
2024-11-06T21:34:39,915   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt'
2024-11-06T21:34:39,921   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt'
2024-11-06T21:34:39,928   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt'
2024-11-06T21:34:39,935   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt'
2024-11-06T21:34:39,942   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt'
2024-11-06T21:34:39,947   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt'
2024-11-06T21:34:39,956   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt'
2024-11-06T21:34:39,960   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt'
2024-11-06T21:34:39,966   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt'
2024-11-06T21:34:39,978   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt'
2024-11-06T21:34:39,997   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt'
2024-11-06T21:34:40,007   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt'
2024-11-06T21:34:40,021   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt'
2024-11-06T21:34:40,035   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt'
2024-11-06T21:34:40,045   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt'
2024-11-06T21:34:40,067   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt'
2024-11-06T21:34:40,076   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt'
2024-11-06T21:34:40,088   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt'
2024-11-06T21:34:40,097   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt'
2024-11-06T21:34:40,098   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt'
2024-11-06T21:34:40,113   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt'
2024-11-06T21:34:40,118   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt'
2024-11-06T21:34:40,123   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt'
2024-11-06T21:34:40,129   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt'
2024-11-06T21:34:40,134   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt'
2024-11-06T21:34:40,140   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt'
2024-11-06T21:34:40,145   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt'
2024-11-06T21:34:40,150   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt'
2024-11-06T21:34:40,153   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt'
2024-11-06T21:34:40,158   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt'
2024-11-06T21:34:40,191   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt'
2024-11-06T21:34:40,196   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt'
2024-11-06T21:34:40,210   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt'
2024-11-06T21:34:40,229   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt'
2024-11-06T21:34:40,243   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt'
2024-11-06T21:34:40,257   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt'
2024-11-06T21:34:40,266   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt'
2024-11-06T21:34:40,279   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt'
2024-11-06T21:34:40,291   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt'
2024-11-06T21:34:40,298   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt'
2024-11-06T21:34:40,299   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt'
2024-11-06T21:34:40,307   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt'
2024-11-06T21:34:40,308   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt'
2024-11-06T21:34:40,327   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt'
2024-11-06T21:34:40,334   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt'
2024-11-06T21:34:40,341   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt'
2024-11-06T21:34:40,348   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt'
2024-11-06T21:34:40,356   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt'
2024-11-06T21:34:40,363   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt'
2024-11-06T21:34:40,370   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt'
2024-11-06T21:34:40,377   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt'
2024-11-06T21:34:40,383   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt'
2024-11-06T21:34:40,388   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt'
2024-11-06T21:34:40,430   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt'
2024-11-06T21:34:40,437   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt'
2024-11-06T21:34:40,457   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt'
2024-11-06T21:34:40,481   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt'
2024-11-06T21:34:40,501   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt'
2024-11-06T21:34:40,520   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt'
2024-11-06T21:34:40,534   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt'
2024-11-06T21:34:40,552   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt'
2024-11-06T21:34:40,567   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt'
2024-11-06T21:34:40,577   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt'
2024-11-06T21:34:40,578   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt'
2024-11-06T21:34:40,590   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt'
2024-11-06T21:34:40,592   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt'
2024-11-06T21:34:40,594   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt'
2024-11-06T21:34:40,597   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt'
2024-11-06T21:34:40,603   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt'
2024-11-06T21:34:40,606   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt'
2024-11-06T21:34:40,607   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt'
2024-11-06T21:34:40,610   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt'
2024-11-06T21:34:40,614   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt'
2024-11-06T21:34:40,615   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt'
2024-11-06T21:34:40,618   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt'
2024-11-06T21:34:40,621   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt'
2024-11-06T21:34:40,625   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt'
2024-11-06T21:34:40,628   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt'
2024-11-06T21:34:40,631   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt'
2024-11-06T21:34:40,635   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt'
2024-11-06T21:34:40,639   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt'
2024-11-06T21:34:40,642   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt'
2024-11-06T21:34:40,645   adding 'SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py'
2024-11-06T21:34:40,656   adding 'SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py'
2024-11-06T21:34:40,662   adding 'SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py'
2024-11-06T21:34:40,667   adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py'
2024-11-06T21:34:40,669   adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py'
2024-11-06T21:34:40,670   adding 'SigProfilerMatrixGenerator/scripts/__init__.py'
2024-11-06T21:34:40,673   adding 'SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py'
2024-11-06T21:34:40,674   adding 'SigProfilerMatrixGenerator/scripts/ref_install.py'
2024-11-06T21:34:40,677   adding 'SigProfilerMatrixGenerator/scripts/reference_genome_manager.py'
2024-11-06T21:34:40,679   adding 'SigProfilerMatrixGenerator/scripts/save_chrom_strings.py'
2024-11-06T21:34:40,681   adding 'SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py'
2024-11-06T21:34:40,683   adding 'SigProfilerMatrixGenerator/scripts/save_context_distribution.py'
2024-11-06T21:34:40,685   adding 'SigProfilerMatrixGenerator/scripts/save_tsb_192.py'
2024-11-06T21:34:40,688   adding 'SigProfilerMatrixGenerator/scripts/vcfToBedpe.py'
2024-11-06T21:34:40,707   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt'
2024-11-06T21:34:40,709   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt'
2024-11-06T21:34:40,729   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt'
2024-11-06T21:34:40,731   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt'
2024-11-06T21:34:40,732   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py'
2024-11-06T21:34:40,751   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt'
2024-11-06T21:34:40,753   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt'
2024-11-06T21:34:40,772   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt'
2024-11-06T21:34:40,774   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt'
2024-11-06T21:34:40,776   adding 'SigProfilerMatrixGenerator-1.2.31.dist-info/LICENSE'
2024-11-06T21:34:40,778   adding 'SigProfilerMatrixGenerator-1.2.31.dist-info/METADATA'
2024-11-06T21:34:40,779   adding 'SigProfilerMatrixGenerator-1.2.31.dist-info/WHEEL'
2024-11-06T21:34:40,780   adding 'SigProfilerMatrixGenerator-1.2.31.dist-info/entry_points.txt'
2024-11-06T21:34:40,781   adding 'SigProfilerMatrixGenerator-1.2.31.dist-info/top_level.txt'
2024-11-06T21:34:40,798   adding 'SigProfilerMatrixGenerator-1.2.31.dist-info/RECORD'
2024-11-06T21:34:41,242   removing build/bdist.linux-armv7l/wheel
2024-11-06T21:34:41,609   Building wheel for sigprofilermatrixgenerator (setup.py): finished with status 'done'
2024-11-06T21:34:42,018   Created wheel for sigprofilermatrixgenerator: filename=SigProfilerMatrixGenerator-1.2.31-py3-none-any.whl size=41323296 sha256=bcc51dc2a832f0b039934107fee09f18a29d05adae874cff20ef28a7d2edd34a
2024-11-06T21:34:42,020   Stored in directory: /tmp/pip-ephem-wheel-cache-g5cbk0fp/wheels/a4/81/80/cf43fdafc1c886cde408ce2b757ecf13f9e96c5140b04f2b23
2024-11-06T21:34:42,070 Successfully built sigprofilermatrixgenerator
2024-11-06T21:34:43,085 Removed build tracker: '/tmp/pip-build-tracker-1ka7ljok'