2024-11-14T20:13:30,206 Created temporary directory: /tmp/pip-build-tracker-dnbmm0q1 2024-11-14T20:13:30,207 Initialized build tracking at /tmp/pip-build-tracker-dnbmm0q1 2024-11-14T20:13:30,208 Created build tracker: /tmp/pip-build-tracker-dnbmm0q1 2024-11-14T20:13:30,208 Entered build tracker: /tmp/pip-build-tracker-dnbmm0q1 2024-11-14T20:13:30,209 Created temporary directory: /tmp/pip-wheel-u2yd3jtu 2024-11-14T20:13:30,213 Created temporary directory: /tmp/pip-ephem-wheel-cache-celpku01 2024-11-14T20:13:30,258 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-11-14T20:13:30,261 2 location(s) to search for versions of emtools: 2024-11-14T20:13:30,261 * https://pypi.org/simple/emtools/ 2024-11-14T20:13:30,261 * https://www.piwheels.org/simple/emtools/ 2024-11-14T20:13:30,262 Fetching project page and analyzing links: https://pypi.org/simple/emtools/ 2024-11-14T20:13:30,262 Getting page https://pypi.org/simple/emtools/ 2024-11-14T20:13:30,264 Found index url https://pypi.org/simple/ 2024-11-14T20:13:30,488 Fetched page https://pypi.org/simple/emtools/ as application/vnd.pypi.simple.v1+json 2024-11-14T20:13:30,494 Found link https://files.pythonhosted.org/packages/f0/af/4f642132400e4c09a77aeb92ec0d7c02b2fabdec90f4b65af4f86e1bd4d3/emtools-0.0.0.tar.gz (from https://pypi.org/simple/emtools/), version: 0.0.0 2024-11-14T20:13:30,495 Found link https://files.pythonhosted.org/packages/06/b7/0741c413b8faaee915f569a749a871f42a2d4b15acfe0307f6c294cbaef6/emtools-0.0.2.tar.gz (from https://pypi.org/simple/emtools/), version: 0.0.2 2024-11-14T20:13:30,495 Found link https://files.pythonhosted.org/packages/54/1b/fb75e9638bd0da2db9435c1f5bb388e4592b6217ca000ef7689ac2391773/emtools-0.0.3.tar.gz (from https://pypi.org/simple/emtools/), version: 0.0.3 2024-11-14T20:13:30,496 Found link https://files.pythonhosted.org/packages/62/01/21929f8f05d69108a6161ff25c67f2d3ad60903a071a0facf885df61943b/emtools-0.0.4.tar.gz (from https://pypi.org/simple/emtools/), version: 0.0.4 2024-11-14T20:13:30,496 Skipping link: No binaries permitted for emtools: https://files.pythonhosted.org/packages/91/ab/faa4c08c7702c884c337e865b58a307e31627da2a778e0f725ca77b1c778/emtools-0.0.5-py3-none-any.whl (from https://pypi.org/simple/emtools/) 2024-11-14T20:13:30,497 Found link https://files.pythonhosted.org/packages/95/d4/163e2359084acaea932ff0884d54b78c59495681cd9973ce5fce3881e0e9/emtools-0.0.5.tar.gz (from https://pypi.org/simple/emtools/), version: 0.0.5 2024-11-14T20:13:30,498 Skipping link: No binaries permitted for emtools: https://files.pythonhosted.org/packages/cb/fe/44d32a39bcc1e433c69cad5b3a973e89ab3850324786aebfdd42c6d07383/emtools-0.0.6-py3-none-any.whl (from https://pypi.org/simple/emtools/) 2024-11-14T20:13:30,498 Found link https://files.pythonhosted.org/packages/da/f5/9a7d9b99df800b14c95da3bcc89c4ce809051ef7af3de347954c750c6b9b/emtools-0.0.6.tar.gz (from https://pypi.org/simple/emtools/), version: 0.0.6 2024-11-14T20:13:30,499 Skipping link: No binaries permitted for emtools: https://files.pythonhosted.org/packages/d3/14/ce17b0893e0b2500ffe9ef738ae13493397789d4eb9bd3b756fb7ab840f4/emtools-0.0.7-py3-none-any.whl (from https://pypi.org/simple/emtools/) 2024-11-14T20:13:30,500 Found link https://files.pythonhosted.org/packages/96/4b/e916371ba159bb0ac58a7baf922cd030e557ad5972bcbc8a211a7d492321/emtools-0.0.7.tar.gz (from https://pypi.org/simple/emtools/), version: 0.0.7 2024-11-14T20:13:30,500 Skipping link: No binaries permitted for emtools: https://files.pythonhosted.org/packages/44/91/f8fdb47b9a25fa54bf5d4d93bde7a75ea2dd2a8cecdddef361401457094a/emtools-0.0.8-py3-none-any.whl (from https://pypi.org/simple/emtools/) 2024-11-14T20:13:30,501 Found link https://files.pythonhosted.org/packages/5d/53/40a0889273f818141f174c4ee73397f42037987f3406bb8eb30d30c0022f/emtools-0.0.8.tar.gz (from https://pypi.org/simple/emtools/), version: 0.0.8 2024-11-14T20:13:30,501 Found link https://files.pythonhosted.org/packages/94/94/f477d8c8e19899863419bb9dc4b83ffd288eb34124eeb8fdb29ac8116693/emtools-0.0.10.tar.gz (from https://pypi.org/simple/emtools/), version: 0.0.10 2024-11-14T20:13:30,502 Skipping link: No binaries permitted for emtools: https://files.pythonhosted.org/packages/eb/66/32d980922430901189df327a2146ca4dd766db8398c65e80a00ceda3afb7/emtools-0.0.11-py3-none-any.whl (from https://pypi.org/simple/emtools/) 2024-11-14T20:13:30,503 Found link https://files.pythonhosted.org/packages/9a/d2/767d09ce8dafb29c5a9c2a15d2781b927115cca0c10a7f347db2cfbe017b/emtools-0.0.11.tar.gz (from https://pypi.org/simple/emtools/), version: 0.0.11 2024-11-14T20:13:30,504 Skipping link: No binaries permitted for emtools: https://files.pythonhosted.org/packages/8a/50/f358e51aeab15ae183ed6f1196cf8e508e92084434c9963ac61d8110abbc/emtools-0.1.0-py3-none-any.whl (from https://pypi.org/simple/emtools/) 2024-11-14T20:13:30,504 Found link https://files.pythonhosted.org/packages/0c/af/fa4ae4b0054ae43241d1f158aaa274223633c68c6afb132105ef649c963e/emtools-0.1.0.tar.gz (from https://pypi.org/simple/emtools/), version: 0.1.0 2024-11-14T20:13:30,505 Skipping link: No binaries permitted for emtools: https://files.pythonhosted.org/packages/d1/f7/31a0a7fc3768d0420e28a590dc4a0c356154d1e72672629624afd34744db/emtools-0.1.1-py3-none-any.whl (from https://pypi.org/simple/emtools/) 2024-11-14T20:13:30,505 Found link https://files.pythonhosted.org/packages/b0/96/0cc277f0d733972d4c95bd8a3c66397b5053609a6c6a8ad223266873e32b/emtools-0.1.1.tar.gz (from https://pypi.org/simple/emtools/), version: 0.1.1 2024-11-14T20:13:30,506 Skipping link: No binaries permitted for emtools: https://files.pythonhosted.org/packages/49/be/2d4cc59f9e07642a3f71b6ccc8fdb8df8bb2fe6a9f640e7d9559cc15b1e9/emtools-0.1.2-py3-none-any.whl (from https://pypi.org/simple/emtools/) 2024-11-14T20:13:30,506 Found link https://files.pythonhosted.org/packages/22/d8/78f56a1305b5b2eba4e3b2c240ab15239581c97d14417a9a0e75d5f3e897/emtools-0.1.2.tar.gz (from https://pypi.org/simple/emtools/), version: 0.1.2 2024-11-14T20:13:30,507 Skipping link: No binaries permitted for emtools: https://files.pythonhosted.org/packages/fe/88/eebdbbd75933050114e35cb30cff179db92b29b7ca0ca30203c3203e5d25/emtools-0.1.3-py3-none-any.whl (from https://pypi.org/simple/emtools/) 2024-11-14T20:13:30,508 Found link https://files.pythonhosted.org/packages/4c/50/7fe42f68abe4858506df51aba27f94310e9c58885ef988cfbddf6f96f1bc/emtools-0.1.3.tar.gz (from https://pypi.org/simple/emtools/), version: 0.1.3 2024-11-14T20:13:30,509 Fetching project page and analyzing links: https://www.piwheels.org/simple/emtools/ 2024-11-14T20:13:30,509 Getting page https://www.piwheels.org/simple/emtools/ 2024-11-14T20:13:30,511 Found index url https://www.piwheels.org/simple/ 2024-11-14T20:13:30,675 Fetched page https://www.piwheels.org/simple/emtools/ as text/html 2024-11-14T20:13:30,680 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.1.2-py3-none-any.whl#sha256=8db7e58698c376aecda8d483b103a6a7ce7cc0bc7b888176a498d09807f3950c (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,681 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.1.1-py3-none-any.whl#sha256=d524232fd352b8d5e844eda755c5859e82dfa77a9771fb409adf1877ab181c27 (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,681 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.1.0-py3-none-any.whl#sha256=c5992bf119ab03234b5237f7b3edd6e151045ef7a762edc83e32335e7a54c326 (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,682 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.0.11-py3-none-any.whl#sha256=18a5ac737c24adff25f6f0f20ad910cc0fc1a4ffd878d22f150e26151e6e0cb4 (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,682 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.0.10-py3-none-any.whl#sha256=e1167ab7156b692c10e1a966f99a08a698971f278975ee36410dd6e24e29fcdc (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,683 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.0.8-py3-none-any.whl#sha256=d41d9de4001f23e84f45ee574d8dc7ab1e3debb4c5762a82fc00a923c5727eb4 (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,684 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.0.7-py3-none-any.whl#sha256=85808816dbf5f8e44acffe56b43048a165f7a71426c360f770a4f382eb946539 (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,684 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.0.6-py3-none-any.whl#sha256=cff338aae8adfd5a82e75cbd1f8afe9cea04916032f9daa4f42316d469e6acb8 (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,685 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.0.5-py3-none-any.whl#sha256=a91d6b1d200e6451865aedac7cbfa242c8658959d7085f181f1fc64e7a953c88 (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,685 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.0.4-py3-none-any.whl#sha256=f5dd5842ce3584bec6798546490de008bf69e4eb406f73751c9fea68619c2a53 (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,686 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.0.3-py3-none-any.whl#sha256=aedb963e5c8aaf0ab67b173f9fd1ef2f7eb19b1906595f2e29900a687923aaaf (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,686 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.0.2-py3-none-any.whl#sha256=bd59cef48fec1f90b809f16d7e6eff248fde585f74e37bc10c41096460bf507e (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,686 Skipping link: No binaries permitted for emtools: https://www.piwheels.org/simple/emtools/emtools-0.0.0-py3-none-any.whl#sha256=938f7b2bcfe04394ee4b500ba43c815aed02ed30ebc1f664b284771fa1f9e052 (from https://www.piwheels.org/simple/emtools/) 2024-11-14T20:13:30,687 Skipping link: not a file: https://www.piwheels.org/simple/emtools/ 2024-11-14T20:13:30,688 Skipping link: not a file: https://pypi.org/simple/emtools/ 2024-11-14T20:13:30,708 Given no hashes to check 1 links for project 'emtools': discarding no candidates 2024-11-14T20:13:30,710 Collecting emtools==0.1.3 2024-11-14T20:13:30,713 Created temporary directory: /tmp/pip-unpack-mrz6k5xq 2024-11-14T20:13:30,928 Downloading emtools-0.1.3.tar.gz (68 kB) 2024-11-14T20:13:31,092 Added emtools==0.1.3 from https://files.pythonhosted.org/packages/4c/50/7fe42f68abe4858506df51aba27f94310e9c58885ef988cfbddf6f96f1bc/emtools-0.1.3.tar.gz to build tracker '/tmp/pip-build-tracker-dnbmm0q1' 2024-11-14T20:13:31,094 Running setup.py (path:/tmp/pip-wheel-u2yd3jtu/emtools_705b41da7eac472c933de2bb2d03601b/setup.py) egg_info for package emtools 2024-11-14T20:13:31,095 Created temporary directory: /tmp/pip-pip-egg-info-qr48u8w5 2024-11-14T20:13:31,096 Preparing metadata (setup.py): started 2024-11-14T20:13:31,097 Running command python setup.py egg_info 2024-11-14T20:13:32,175 running egg_info 2024-11-14T20:13:32,203 creating /tmp/pip-pip-egg-info-qr48u8w5/emtools.egg-info 2024-11-14T20:13:32,204 writing /tmp/pip-pip-egg-info-qr48u8w5/emtools.egg-info/PKG-INFO 2024-11-14T20:13:32,207 writing dependency_links to /tmp/pip-pip-egg-info-qr48u8w5/emtools.egg-info/dependency_links.txt 2024-11-14T20:13:32,209 writing entry points to /tmp/pip-pip-egg-info-qr48u8w5/emtools.egg-info/entry_points.txt 2024-11-14T20:13:32,211 writing requirements to /tmp/pip-pip-egg-info-qr48u8w5/emtools.egg-info/requires.txt 2024-11-14T20:13:32,212 writing top-level names to /tmp/pip-pip-egg-info-qr48u8w5/emtools.egg-info/top_level.txt 2024-11-14T20:13:32,214 writing manifest file '/tmp/pip-pip-egg-info-qr48u8w5/emtools.egg-info/SOURCES.txt' 2024-11-14T20:13:32,336 reading manifest file '/tmp/pip-pip-egg-info-qr48u8w5/emtools.egg-info/SOURCES.txt' 2024-11-14T20:13:32,338 reading manifest template 'MANIFEST.in' 2024-11-14T20:13:32,341 adding license file 'LICENSE' 2024-11-14T20:13:32,344 writing manifest file '/tmp/pip-pip-egg-info-qr48u8w5/emtools.egg-info/SOURCES.txt' 2024-11-14T20:13:32,454 Preparing metadata (setup.py): finished with status 'done' 2024-11-14T20:13:32,458 Source in /tmp/pip-wheel-u2yd3jtu/emtools_705b41da7eac472c933de2bb2d03601b has version 0.1.3, which satisfies requirement emtools==0.1.3 from https://files.pythonhosted.org/packages/4c/50/7fe42f68abe4858506df51aba27f94310e9c58885ef988cfbddf6f96f1bc/emtools-0.1.3.tar.gz 2024-11-14T20:13:32,459 Removed emtools==0.1.3 from https://files.pythonhosted.org/packages/4c/50/7fe42f68abe4858506df51aba27f94310e9c58885ef988cfbddf6f96f1bc/emtools-0.1.3.tar.gz from build tracker '/tmp/pip-build-tracker-dnbmm0q1' 2024-11-14T20:13:32,465 Created temporary directory: /tmp/pip-unpack-wlgil6dk 2024-11-14T20:13:32,466 Created temporary directory: /tmp/pip-unpack-cs2qq866 2024-11-14T20:13:32,466 Building wheels for collected packages: emtools 2024-11-14T20:13:32,470 Created temporary directory: /tmp/pip-wheel-3tsavkqh 2024-11-14T20:13:32,471 Building wheel for emtools (setup.py): started 2024-11-14T20:13:32,472 Destination directory: /tmp/pip-wheel-3tsavkqh 2024-11-14T20:13:32,472 Running command python setup.py bdist_wheel 2024-11-14T20:13:33,530 running bdist_wheel 2024-11-14T20:13:33,664 running build 2024-11-14T20:13:33,665 running build_py 2024-11-14T20:13:33,695 creating build/lib/emtools 2024-11-14T20:13:33,698 copying emtools/__init__.py -> build/lib/emtools 2024-11-14T20:13:33,701 creating build/lib/emtools/image 2024-11-14T20:13:33,702 copying emtools/image/thumbnail.py -> build/lib/emtools/image 2024-11-14T20:13:33,705 copying emtools/image/__init__.py -> build/lib/emtools/image 2024-11-14T20:13:33,708 creating build/lib/emtools/tests 2024-11-14T20:13:33,710 copying emtools/tests/__init__.py -> build/lib/emtools/tests 2024-11-14T20:13:33,712 copying emtools/tests/test_metadata.py -> build/lib/emtools/tests 2024-11-14T20:13:33,714 copying emtools/tests/test_pipeline.py -> build/lib/emtools/tests 2024-11-14T20:13:33,716 copying emtools/tests/star_pipeline_tester.py -> build/lib/emtools/tests 2024-11-14T20:13:33,718 copying emtools/tests/test_utils.py -> build/lib/emtools/tests 2024-11-14T20:13:33,721 creating build/lib/emtools/scripts 2024-11-14T20:13:33,722 copying emtools/scripts/emt-frames.py -> build/lib/emtools/scripts 2024-11-14T20:13:33,724 copying emtools/scripts/emt-scipion-apo.py -> build/lib/emtools/scripts 2024-11-14T20:13:33,726 copying emtools/scripts/__init__.py -> build/lib/emtools/scripts 2024-11-14T20:13:33,728 copying emtools/scripts/emt-scipion-otf.py -> build/lib/emtools/scripts 2024-11-14T20:13:33,730 copying emtools/scripts/emt_epu.py -> build/lib/emtools/scripts 2024-11-14T20:13:33,732 copying emtools/scripts/emt_ps.py -> build/lib/emtools/scripts 2024-11-14T20:13:33,734 copying emtools/scripts/emt_files.py -> build/lib/emtools/scripts 2024-11-14T20:13:33,736 copying emtools/scripts/emt-change-optics.py -> build/lib/emtools/scripts 2024-11-14T20:13:33,738 copying emtools/scripts/emt_beamshifts.py -> build/lib/emtools/scripts 2024-11-14T20:13:33,741 copying emtools/scripts/emt_angdist.py -> build/lib/emtools/scripts 2024-11-14T20:13:33,743 creating build/lib/emtools/metadata 2024-11-14T20:13:33,744 copying emtools/metadata/starfile.py -> build/lib/emtools/metadata 2024-11-14T20:13:33,747 copying emtools/metadata/epu.py -> build/lib/emtools/metadata 2024-11-14T20:13:33,750 copying emtools/metadata/table.py -> build/lib/emtools/metadata 2024-11-14T20:13:33,752 copying emtools/metadata/__init__.py -> build/lib/emtools/metadata 2024-11-14T20:13:33,754 copying emtools/metadata/misc.py -> build/lib/emtools/metadata 2024-11-14T20:13:33,756 copying emtools/metadata/sqlite.py -> build/lib/emtools/metadata 2024-11-14T20:13:33,759 creating build/lib/emtools/jobs 2024-11-14T20:13:33,760 copying emtools/jobs/__init__.py -> build/lib/emtools/jobs 2024-11-14T20:13:33,762 copying emtools/jobs/pipeline.py -> build/lib/emtools/jobs 2024-11-14T20:13:33,765 copying emtools/jobs/batch_manager.py -> build/lib/emtools/jobs 2024-11-14T20:13:33,768 creating build/lib/emtools/utils 2024-11-14T20:13:33,769 copying emtools/utils/system.py -> build/lib/emtools/utils 2024-11-14T20:13:33,771 copying emtools/utils/__init__.py -> build/lib/emtools/utils 2024-11-14T20:13:33,772 copying emtools/utils/server.py -> build/lib/emtools/utils 2024-11-14T20:13:33,774 copying emtools/utils/pretty.py -> build/lib/emtools/utils 2024-11-14T20:13:33,776 copying emtools/utils/path.py -> build/lib/emtools/utils 2024-11-14T20:13:33,779 copying emtools/utils/time.py -> build/lib/emtools/utils 2024-11-14T20:13:33,780 copying emtools/utils/process.py -> build/lib/emtools/utils 2024-11-14T20:13:33,783 copying emtools/utils/color.py -> build/lib/emtools/utils 2024-11-14T20:13:33,785 creating build/lib/emtools/pwx 2024-11-14T20:13:33,786 copying emtools/pwx/monitors.py -> build/lib/emtools/pwx 2024-11-14T20:13:33,788 copying emtools/pwx/workflow.py -> build/lib/emtools/pwx 2024-11-14T20:13:33,790 copying emtools/pwx/__init__.py -> build/lib/emtools/pwx 2024-11-14T20:13:33,792 creating build/lib/emtools/hpc 2024-11-14T20:13:33,794 copying emtools/hpc/__main__.py -> build/lib/emtools/hpc 2024-11-14T20:13:33,795 copying emtools/hpc/__init__.py -> build/lib/emtools/hpc 2024-11-14T20:13:33,797 copying emtools/hpc/lsf.py -> build/lib/emtools/hpc 2024-11-14T20:13:33,799 copying emtools/hpc/submit.py -> build/lib/emtools/hpc 2024-11-14T20:13:33,801 running egg_info 2024-11-14T20:13:33,828 writing emtools.egg-info/PKG-INFO 2024-11-14T20:13:33,831 writing dependency_links to emtools.egg-info/dependency_links.txt 2024-11-14T20:13:33,832 writing entry points to emtools.egg-info/entry_points.txt 2024-11-14T20:13:33,834 writing requirements to emtools.egg-info/requires.txt 2024-11-14T20:13:33,835 writing top-level names to emtools.egg-info/top_level.txt 2024-11-14T20:13:33,871 reading manifest file 'emtools.egg-info/SOURCES.txt' 2024-11-14T20:13:33,875 reading manifest template 'MANIFEST.in' 2024-11-14T20:13:33,877 adding license file 'LICENSE' 2024-11-14T20:13:33,882 writing manifest file 'emtools.egg-info/SOURCES.txt' 2024-11-14T20:13:33,893 running build_scripts 2024-11-14T20:13:33,894 creating build/scripts-3.11 2024-11-14T20:13:33,895 copying and adjusting emtools/scripts/emt-scipion-otf.py -> build/scripts-3.11 2024-11-14T20:13:33,898 changing mode of build/scripts-3.11/emt-scipion-otf.py from 644 to 755 2024-11-14T20:13:33,928 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-11-14T20:13:33,929 !! 2024-11-14T20:13:33,930 ******************************************************************************** 2024-11-14T20:13:33,931 Please avoid running ``setup.py`` directly. 2024-11-14T20:13:33,931 Instead, use pypa/build, pypa/installer or other 2024-11-14T20:13:33,932 standards-based tools. 2024-11-14T20:13:33,933 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-11-14T20:13:33,934 ******************************************************************************** 2024-11-14T20:13:33,935 !! 2024-11-14T20:13:33,935 self.initialize_options() 2024-11-14T20:13:33,957 installing to build/bdist.linux-armv7l/wheel 2024-11-14T20:13:33,958 running install 2024-11-14T20:13:33,982 running install_lib 2024-11-14T20:13:34,009 creating build/bdist.linux-armv7l/wheel 2024-11-14T20:13:34,012 creating build/bdist.linux-armv7l/wheel/emtools 2024-11-14T20:13:34,014 creating build/bdist.linux-armv7l/wheel/emtools/image 2024-11-14T20:13:34,015 copying build/lib/emtools/image/thumbnail.py -> build/bdist.linux-armv7l/wheel/./emtools/image 2024-11-14T20:13:34,017 copying build/lib/emtools/image/__init__.py -> build/bdist.linux-armv7l/wheel/./emtools/image 2024-11-14T20:13:34,019 copying build/lib/emtools/__init__.py -> build/bdist.linux-armv7l/wheel/./emtools 2024-11-14T20:13:34,022 creating build/bdist.linux-armv7l/wheel/emtools/tests 2024-11-14T20:13:34,023 copying build/lib/emtools/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./emtools/tests 2024-11-14T20:13:34,025 copying build/lib/emtools/tests/test_metadata.py -> build/bdist.linux-armv7l/wheel/./emtools/tests 2024-11-14T20:13:34,027 copying build/lib/emtools/tests/test_pipeline.py -> build/bdist.linux-armv7l/wheel/./emtools/tests 2024-11-14T20:13:34,029 copying build/lib/emtools/tests/star_pipeline_tester.py -> build/bdist.linux-armv7l/wheel/./emtools/tests 2024-11-14T20:13:34,031 copying build/lib/emtools/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/./emtools/tests 2024-11-14T20:13:34,034 creating build/bdist.linux-armv7l/wheel/emtools/scripts 2024-11-14T20:13:34,035 copying build/lib/emtools/scripts/emt-frames.py -> build/bdist.linux-armv7l/wheel/./emtools/scripts 2024-11-14T20:13:34,037 copying build/lib/emtools/scripts/emt-scipion-apo.py -> build/bdist.linux-armv7l/wheel/./emtools/scripts 2024-11-14T20:13:34,039 copying build/lib/emtools/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/./emtools/scripts 2024-11-14T20:13:34,040 copying build/lib/emtools/scripts/emt-scipion-otf.py -> build/bdist.linux-armv7l/wheel/./emtools/scripts 2024-11-14T20:13:34,043 copying build/lib/emtools/scripts/emt_epu.py -> build/bdist.linux-armv7l/wheel/./emtools/scripts 2024-11-14T20:13:34,045 copying build/lib/emtools/scripts/emt_ps.py -> build/bdist.linux-armv7l/wheel/./emtools/scripts 2024-11-14T20:13:34,047 copying build/lib/emtools/scripts/emt_files.py -> build/bdist.linux-armv7l/wheel/./emtools/scripts 2024-11-14T20:13:34,049 copying build/lib/emtools/scripts/emt-change-optics.py -> build/bdist.linux-armv7l/wheel/./emtools/scripts 2024-11-14T20:13:34,051 copying build/lib/emtools/scripts/emt_beamshifts.py -> build/bdist.linux-armv7l/wheel/./emtools/scripts 2024-11-14T20:13:34,053 copying build/lib/emtools/scripts/emt_angdist.py -> build/bdist.linux-armv7l/wheel/./emtools/scripts 2024-11-14T20:13:34,056 creating build/bdist.linux-armv7l/wheel/emtools/metadata 2024-11-14T20:13:34,057 copying build/lib/emtools/metadata/starfile.py -> build/bdist.linux-armv7l/wheel/./emtools/metadata 2024-11-14T20:13:34,060 copying build/lib/emtools/metadata/epu.py -> build/bdist.linux-armv7l/wheel/./emtools/metadata 2024-11-14T20:13:34,062 copying build/lib/emtools/metadata/table.py -> build/bdist.linux-armv7l/wheel/./emtools/metadata 2024-11-14T20:13:34,064 copying build/lib/emtools/metadata/__init__.py -> build/bdist.linux-armv7l/wheel/./emtools/metadata 2024-11-14T20:13:34,066 copying build/lib/emtools/metadata/misc.py -> build/bdist.linux-armv7l/wheel/./emtools/metadata 2024-11-14T20:13:34,068 copying build/lib/emtools/metadata/sqlite.py -> build/bdist.linux-armv7l/wheel/./emtools/metadata 2024-11-14T20:13:34,071 creating build/bdist.linux-armv7l/wheel/emtools/jobs 2024-11-14T20:13:34,072 copying build/lib/emtools/jobs/__init__.py -> build/bdist.linux-armv7l/wheel/./emtools/jobs 2024-11-14T20:13:34,074 copying build/lib/emtools/jobs/pipeline.py -> build/bdist.linux-armv7l/wheel/./emtools/jobs 2024-11-14T20:13:34,076 copying build/lib/emtools/jobs/batch_manager.py -> build/bdist.linux-armv7l/wheel/./emtools/jobs 2024-11-14T20:13:34,079 creating build/bdist.linux-armv7l/wheel/emtools/utils 2024-11-14T20:13:34,080 copying build/lib/emtools/utils/system.py -> build/bdist.linux-armv7l/wheel/./emtools/utils 2024-11-14T20:13:34,082 copying build/lib/emtools/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./emtools/utils 2024-11-14T20:13:34,084 copying build/lib/emtools/utils/server.py -> build/bdist.linux-armv7l/wheel/./emtools/utils 2024-11-14T20:13:34,086 copying build/lib/emtools/utils/pretty.py -> build/bdist.linux-armv7l/wheel/./emtools/utils 2024-11-14T20:13:34,088 copying build/lib/emtools/utils/path.py -> build/bdist.linux-armv7l/wheel/./emtools/utils 2024-11-14T20:13:34,090 copying build/lib/emtools/utils/time.py -> build/bdist.linux-armv7l/wheel/./emtools/utils 2024-11-14T20:13:34,092 copying build/lib/emtools/utils/process.py -> build/bdist.linux-armv7l/wheel/./emtools/utils 2024-11-14T20:13:34,094 copying build/lib/emtools/utils/color.py -> build/bdist.linux-armv7l/wheel/./emtools/utils 2024-11-14T20:13:34,097 creating build/bdist.linux-armv7l/wheel/emtools/pwx 2024-11-14T20:13:34,098 copying build/lib/emtools/pwx/monitors.py -> build/bdist.linux-armv7l/wheel/./emtools/pwx 2024-11-14T20:13:34,100 copying build/lib/emtools/pwx/workflow.py -> build/bdist.linux-armv7l/wheel/./emtools/pwx 2024-11-14T20:13:34,102 copying build/lib/emtools/pwx/__init__.py -> build/bdist.linux-armv7l/wheel/./emtools/pwx 2024-11-14T20:13:34,104 creating build/bdist.linux-armv7l/wheel/emtools/hpc 2024-11-14T20:13:34,105 copying build/lib/emtools/hpc/__main__.py -> build/bdist.linux-armv7l/wheel/./emtools/hpc 2024-11-14T20:13:34,107 copying build/lib/emtools/hpc/__init__.py -> build/bdist.linux-armv7l/wheel/./emtools/hpc 2024-11-14T20:13:34,108 copying build/lib/emtools/hpc/lsf.py -> build/bdist.linux-armv7l/wheel/./emtools/hpc 2024-11-14T20:13:34,111 copying build/lib/emtools/hpc/submit.py -> build/bdist.linux-armv7l/wheel/./emtools/hpc 2024-11-14T20:13:34,112 running install_egg_info 2024-11-14T20:13:34,147 Copying emtools.egg-info to build/bdist.linux-armv7l/wheel/./emtools-0.1.3-py3.11.egg-info 2024-11-14T20:13:34,158 running install_scripts 2024-11-14T20:13:34,159 creating build/bdist.linux-armv7l/wheel/emtools-0.1.3.data/scripts 2024-11-14T20:13:34,161 copying build/scripts-3.11/emt-scipion-otf.py -> build/bdist.linux-armv7l/wheel/emtools-0.1.3.data/scripts 2024-11-14T20:13:34,164 changing mode of build/bdist.linux-armv7l/wheel/emtools-0.1.3.data/scripts/emt-scipion-otf.py to 755 2024-11-14T20:13:34,180 creating build/bdist.linux-armv7l/wheel/emtools-0.1.3.dist-info/WHEEL 2024-11-14T20:13:34,183 creating '/tmp/pip-wheel-3tsavkqh/emtools-0.1.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-11-14T20:13:34,185 adding 'emtools/__init__.py' 2024-11-14T20:13:34,187 adding 'emtools/hpc/__init__.py' 2024-11-14T20:13:34,189 adding 'emtools/hpc/__main__.py' 2024-11-14T20:13:34,191 adding 'emtools/hpc/lsf.py' 2024-11-14T20:13:34,192 adding 'emtools/hpc/submit.py' 2024-11-14T20:13:34,194 adding 'emtools/image/__init__.py' 2024-11-14T20:13:34,196 adding 'emtools/image/thumbnail.py' 2024-11-14T20:13:34,198 adding 'emtools/jobs/__init__.py' 2024-11-14T20:13:34,199 adding 'emtools/jobs/batch_manager.py' 2024-11-14T20:13:34,201 adding 'emtools/jobs/pipeline.py' 2024-11-14T20:13:34,203 adding 'emtools/metadata/__init__.py' 2024-11-14T20:13:34,205 adding 'emtools/metadata/epu.py' 2024-11-14T20:13:34,207 adding 'emtools/metadata/misc.py' 2024-11-14T20:13:34,208 adding 'emtools/metadata/sqlite.py' 2024-11-14T20:13:34,211 adding 'emtools/metadata/starfile.py' 2024-11-14T20:13:34,213 adding 'emtools/metadata/table.py' 2024-11-14T20:13:34,215 adding 'emtools/pwx/__init__.py' 2024-11-14T20:13:34,216 adding 'emtools/pwx/monitors.py' 2024-11-14T20:13:34,218 adding 'emtools/pwx/workflow.py' 2024-11-14T20:13:34,219 adding 'emtools/scripts/__init__.py' 2024-11-14T20:13:34,221 adding 'emtools/scripts/emt-change-optics.py' 2024-11-14T20:13:34,222 adding 'emtools/scripts/emt-frames.py' 2024-11-14T20:13:34,224 adding 'emtools/scripts/emt-scipion-apo.py' 2024-11-14T20:13:34,228 adding 'emtools/scripts/emt-scipion-otf.py' 2024-11-14T20:13:34,230 adding 'emtools/scripts/emt_angdist.py' 2024-11-14T20:13:34,232 adding 'emtools/scripts/emt_beamshifts.py' 2024-11-14T20:13:34,233 adding 'emtools/scripts/emt_epu.py' 2024-11-14T20:13:34,235 adding 'emtools/scripts/emt_files.py' 2024-11-14T20:13:34,237 adding 'emtools/scripts/emt_ps.py' 2024-11-14T20:13:34,239 adding 'emtools/tests/__init__.py' 2024-11-14T20:13:34,240 adding 'emtools/tests/star_pipeline_tester.py' 2024-11-14T20:13:34,242 adding 'emtools/tests/test_metadata.py' 2024-11-14T20:13:34,244 adding 'emtools/tests/test_pipeline.py' 2024-11-14T20:13:34,245 adding 'emtools/tests/test_utils.py' 2024-11-14T20:13:34,247 adding 'emtools/utils/__init__.py' 2024-11-14T20:13:34,248 adding 'emtools/utils/color.py' 2024-11-14T20:13:34,250 adding 'emtools/utils/path.py' 2024-11-14T20:13:34,251 adding 'emtools/utils/pretty.py' 2024-11-14T20:13:34,252 adding 'emtools/utils/process.py' 2024-11-14T20:13:34,254 adding 'emtools/utils/server.py' 2024-11-14T20:13:34,255 adding 'emtools/utils/system.py' 2024-11-14T20:13:34,257 adding 'emtools/utils/time.py' 2024-11-14T20:13:34,261 adding 'emtools-0.1.3.data/scripts/emt-scipion-otf.py' 2024-11-14T20:13:34,268 adding 'emtools-0.1.3.dist-info/LICENSE' 2024-11-14T20:13:34,269 adding 'emtools-0.1.3.dist-info/METADATA' 2024-11-14T20:13:34,270 adding 'emtools-0.1.3.dist-info/WHEEL' 2024-11-14T20:13:34,271 adding 'emtools-0.1.3.dist-info/entry_points.txt' 2024-11-14T20:13:34,272 adding 'emtools-0.1.3.dist-info/top_level.txt' 2024-11-14T20:13:34,273 adding 'emtools-0.1.3.dist-info/RECORD' 2024-11-14T20:13:34,276 removing build/bdist.linux-armv7l/wheel 2024-11-14T20:13:34,402 Building wheel for emtools (setup.py): finished with status 'done' 2024-11-14T20:13:34,405 Created wheel for emtools: filename=emtools-0.1.3-py3-none-any.whl size=103262 sha256=c9e0669e88256ac977e3200f036d9deb3bf60f808e6bdd16df0efbb7da8c30e1 2024-11-14T20:13:34,406 Stored in directory: /tmp/pip-ephem-wheel-cache-celpku01/wheels/0d/39/7d/66ef98a32ebf03da5fbac65122d0b40e6c933f3291deef697c 2024-11-14T20:13:34,419 Successfully built emtools 2024-11-14T20:13:34,425 Removed build tracker: '/tmp/pip-build-tracker-dnbmm0q1'