2024-11-19T03:55:35,926 Created temporary directory: /tmp/pip-build-tracker-cf0z49hz 2024-11-19T03:55:35,927 Initialized build tracking at /tmp/pip-build-tracker-cf0z49hz 2024-11-19T03:55:35,928 Created build tracker: /tmp/pip-build-tracker-cf0z49hz 2024-11-19T03:55:35,928 Entered build tracker: /tmp/pip-build-tracker-cf0z49hz 2024-11-19T03:55:35,929 Created temporary directory: /tmp/pip-wheel-w08jrloj 2024-11-19T03:55:35,933 Created temporary directory: /tmp/pip-ephem-wheel-cache-akcrv81d 2024-11-19T03:55:35,977 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-11-19T03:55:35,980 2 location(s) to search for versions of kssdutils: 2024-11-19T03:55:35,980 * https://pypi.org/simple/kssdutils/ 2024-11-19T03:55:35,980 * https://www.piwheels.org/simple/kssdutils/ 2024-11-19T03:55:35,981 Fetching project page and analyzing links: https://pypi.org/simple/kssdutils/ 2024-11-19T03:55:35,981 Getting page https://pypi.org/simple/kssdutils/ 2024-11-19T03:55:35,983 Found index url https://pypi.org/simple/ 2024-11-19T03:55:36,127 Fetched page https://pypi.org/simple/kssdutils/ as application/vnd.pypi.simple.v1+json 2024-11-19T03:55:36,129 Found link https://files.pythonhosted.org/packages/61/ef/1bdb91b53dbe31ea0be28ab2c2292994b6228b357a8d54b69ac642f81f01/kssdutils-1.0.0.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.0 2024-11-19T03:55:36,129 Found link https://files.pythonhosted.org/packages/6f/f6/cc67acf92ea770b5f6a8bd97d375432881861935beafe9ebd4031a73482c/kssdutils-1.0.1.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.1 2024-11-19T03:55:36,130 Fetching project page and analyzing links: https://www.piwheels.org/simple/kssdutils/ 2024-11-19T03:55:36,131 Getting page https://www.piwheels.org/simple/kssdutils/ 2024-11-19T03:55:36,132 Found index url https://www.piwheels.org/simple/ 2024-11-19T03:55:36,302 Fetched page https://www.piwheels.org/simple/kssdutils/ as text/html 2024-11-19T03:55:36,304 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=e93f43f34a8ab412f6a0c97bc930a5c9c72997258d109e3f069a56b6270ff331 (from https://www.piwheels.org/simple/kssdutils/) 2024-11-19T03:55:36,305 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=e93f43f34a8ab412f6a0c97bc930a5c9c72997258d109e3f069a56b6270ff331 (from https://www.piwheels.org/simple/kssdutils/) 2024-11-19T03:55:36,306 Skipping link: not a file: https://www.piwheels.org/simple/kssdutils/ 2024-11-19T03:55:36,306 Skipping link: not a file: https://pypi.org/simple/kssdutils/ 2024-11-19T03:55:36,325 Given no hashes to check 1 links for project 'kssdutils': discarding no candidates 2024-11-19T03:55:36,327 Collecting kssdutils==1.0.1 2024-11-19T03:55:36,329 Created temporary directory: /tmp/pip-unpack-colx3m0x 2024-11-19T03:55:36,545 Downloading kssdutils-1.0.1.tar.gz (44 kB) 2024-11-19T03:55:36,655 Added kssdutils==1.0.1 from https://files.pythonhosted.org/packages/6f/f6/cc67acf92ea770b5f6a8bd97d375432881861935beafe9ebd4031a73482c/kssdutils-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-cf0z49hz' 2024-11-19T03:55:36,657 Running setup.py (path:/tmp/pip-wheel-w08jrloj/kssdutils_fe3d4121e8a24091be8abaa9cd39e22d/setup.py) egg_info for package kssdutils 2024-11-19T03:55:36,658 Created temporary directory: /tmp/pip-pip-egg-info-r4kawfdm 2024-11-19T03:55:36,658 Preparing metadata (setup.py): started 2024-11-19T03:55:36,660 Running command python setup.py egg_info 2024-11-19T03:55:37,762 running egg_info 2024-11-19T03:55:37,792 creating /tmp/pip-pip-egg-info-r4kawfdm/kssdutils.egg-info 2024-11-19T03:55:37,796 writing /tmp/pip-pip-egg-info-r4kawfdm/kssdutils.egg-info/PKG-INFO 2024-11-19T03:55:37,800 writing dependency_links to /tmp/pip-pip-egg-info-r4kawfdm/kssdutils.egg-info/dependency_links.txt 2024-11-19T03:55:37,802 writing top-level names to /tmp/pip-pip-egg-info-r4kawfdm/kssdutils.egg-info/top_level.txt 2024-11-19T03:55:37,804 writing manifest file '/tmp/pip-pip-egg-info-r4kawfdm/kssdutils.egg-info/SOURCES.txt' 2024-11-19T03:55:37,917 reading manifest file '/tmp/pip-pip-egg-info-r4kawfdm/kssdutils.egg-info/SOURCES.txt' 2024-11-19T03:55:37,919 reading manifest template 'MANIFEST.in' 2024-11-19T03:55:37,925 warning: no files found matching '*.h' under directory 'njheaders' 2024-11-19T03:55:37,926 warning: no files found matching '*.h' under directory 'dnjheaders' 2024-11-19T03:55:37,929 writing manifest file '/tmp/pip-pip-egg-info-r4kawfdm/kssdutils.egg-info/SOURCES.txt' 2024-11-19T03:55:38,036 Preparing metadata (setup.py): finished with status 'done' 2024-11-19T03:55:38,039 Source in /tmp/pip-wheel-w08jrloj/kssdutils_fe3d4121e8a24091be8abaa9cd39e22d has version 1.0.1, which satisfies requirement kssdutils==1.0.1 from https://files.pythonhosted.org/packages/6f/f6/cc67acf92ea770b5f6a8bd97d375432881861935beafe9ebd4031a73482c/kssdutils-1.0.1.tar.gz 2024-11-19T03:55:38,040 Removed kssdutils==1.0.1 from https://files.pythonhosted.org/packages/6f/f6/cc67acf92ea770b5f6a8bd97d375432881861935beafe9ebd4031a73482c/kssdutils-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-cf0z49hz' 2024-11-19T03:55:38,044 Created temporary directory: /tmp/pip-unpack-532qf31o 2024-11-19T03:55:38,046 Created temporary directory: /tmp/pip-unpack-nu5m_93u 2024-11-19T03:55:38,046 Building wheels for collected packages: kssdutils 2024-11-19T03:55:38,051 Created temporary directory: /tmp/pip-wheel-mu6ocj7y 2024-11-19T03:55:38,052 Building wheel for kssdutils (setup.py): started 2024-11-19T03:55:38,053 Destination directory: /tmp/pip-wheel-mu6ocj7y 2024-11-19T03:55:38,054 Running command python setup.py bdist_wheel 2024-11-19T03:55:39,101 running bdist_wheel 2024-11-19T03:55:39,238 running build 2024-11-19T03:55:39,238 running build_py 2024-11-19T03:55:39,268 creating build/lib.linux-armv7l-cpython-311 2024-11-19T03:55:39,270 copying kssdutils.py -> build/lib.linux-armv7l-cpython-311 2024-11-19T03:55:39,272 running egg_info 2024-11-19T03:55:39,301 writing kssdutils.egg-info/PKG-INFO 2024-11-19T03:55:39,304 writing dependency_links to kssdutils.egg-info/dependency_links.txt 2024-11-19T03:55:39,306 writing top-level names to kssdutils.egg-info/top_level.txt 2024-11-19T03:55:39,335 reading manifest file 'kssdutils.egg-info/SOURCES.txt' 2024-11-19T03:55:39,338 reading manifest template 'MANIFEST.in' 2024-11-19T03:55:39,344 warning: no files found matching '*.h' under directory 'njheaders' 2024-11-19T03:55:39,344 warning: no files found matching '*.h' under directory 'dnjheaders' 2024-11-19T03:55:39,347 writing manifest file 'kssdutils.egg-info/SOURCES.txt' 2024-11-19T03:55:39,349 running build_ext 2024-11-19T03:55:39,807 building 'kssd' extension 2024-11-19T03:55:39,808 creating build/temp.linux-armv7l-cpython-311 2024-11-19T03:55:39,810 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c co2mco.c -o build/temp.linux-armv7l-cpython-311/co2mco.o -fopenmp 2024-11-19T03:55:39,986 co2mco.c: In function ‘cdb_kmerf2kmerdb’: 2024-11-19T03:55:39,987 co2mco.c:109:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2024-11-19T03:55:39,988 109 | for (unsigned int i = 0; i < comp_num; i++) { 2024-11-19T03:55:39,988 | ^ 2024-11-19T03:55:39,991 co2mco.c: In function ‘co2unitllmco’: 2024-11-19T03:55:39,992 co2mco.c:191:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2024-11-19T03:55:39,992 191 | for (unsigned int i = 0; i < bin_sz; i++) { 2024-11-19T03:55:39,993 | ^ 2024-11-19T03:55:40,697 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c command_composite.c -o build/temp.linux-armv7l-cpython-311/command_composite.o -fopenmp 2024-11-19T03:55:41,086 command_composite.c: In function ‘get_species_abundance’: 2024-11-19T03:55:41,087 command_composite.c:32:72: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2024-11-19T03:55:41,087 32 | if (ref_dstat_fpath == NULL) fprintf(stderr, "cannot find %s under %s ", co_dstat, ref_dstat_fpath); 2024-11-19T03:55:41,088 | ^~ 2024-11-19T03:55:41,088 command_composite.c:34:72: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2024-11-19T03:55:41,089 34 | if (qry_dstat_fpath == NULL) fprintf(stderr, "cannot find %s under %s ", co_dstat, qry_dstat_fpath); 2024-11-19T03:55:41,089 | ^~ 2024-11-19T03:55:41,090 command_composite.c:64:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:41,091 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2024-11-19T03:55:41,091 | ^ 2024-11-19T03:55:41,092 command_composite.c:64:31: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:41,093 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2024-11-19T03:55:41,093 | ^~~~~~~~~~ 2024-11-19T03:55:41,094 command_composite.c:64:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2024-11-19T03:55:41,095 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2024-11-19T03:55:41,095 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:41,096 command_composite.c:70:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:41,097 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2024-11-19T03:55:41,098 | ^ 2024-11-19T03:55:41,098 command_composite.c:70:31: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:41,099 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2024-11-19T03:55:41,100 | ^~~~~~~~~~ 2024-11-19T03:55:41,101 command_composite.c:70:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2024-11-19T03:55:41,102 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2024-11-19T03:55:41,102 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:41,103 command_composite.c:76:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:41,104 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2024-11-19T03:55:41,104 | ^ 2024-11-19T03:55:41,105 command_composite.c:76:31: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:41,106 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2024-11-19T03:55:41,106 | ^~~~~~~~~~ 2024-11-19T03:55:41,107 command_composite.c:76:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2024-11-19T03:55:41,107 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2024-11-19T03:55:41,108 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:41,109 command_composite.c:82:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:41,110 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2024-11-19T03:55:41,110 | ^ 2024-11-19T03:55:41,111 command_composite.c:82:31: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:41,111 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2024-11-19T03:55:41,112 | ^~~~~~~~~~ 2024-11-19T03:55:41,112 command_composite.c:82:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2024-11-19T03:55:41,113 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2024-11-19T03:55:41,113 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:41,114 command_composite.c:88:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:41,114 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2024-11-19T03:55:41,115 | ^ 2024-11-19T03:55:41,115 command_composite.c:88:31: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:41,116 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2024-11-19T03:55:41,116 | ^~~~~~~~~~~~ 2024-11-19T03:55:41,117 command_composite.c:88:13: note: ‘sprintf’ output 6 or more bytes (assuming 271) into a destination of size 256 2024-11-19T03:55:41,118 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2024-11-19T03:55:41,118 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:41,358 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c command_dist.c -o build/temp.linux-armv7l-cpython-311/command_dist.o -fopenmp 2024-11-19T03:55:41,580 command_dist.c: In function ‘mco_cbd_co_dist’: 2024-11-19T03:55:41,581 command_dist.c:677:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2024-11-19T03:55:41,582 677 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2024-11-19T03:55:41,583 | ~~^ 2024-11-19T03:55:41,583 | | 2024-11-19T03:55:41,584 | long unsigned int 2024-11-19T03:55:41,584 | %u 2024-11-19T03:55:41,585 678 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2024-11-19T03:55:41,586 | ~~~~~~~ 2024-11-19T03:55:41,586 | | 2024-11-19T03:55:41,587 | size_t {aka unsigned int} 2024-11-19T03:55:41,588 command_dist.c:677:92: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2024-11-19T03:55:41,588 677 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2024-11-19T03:55:41,589 | ~~^ 2024-11-19T03:55:41,589 | | 2024-11-19T03:55:41,590 | long unsigned int 2024-11-19T03:55:41,591 | %u 2024-11-19T03:55:41,592 678 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2024-11-19T03:55:41,593 679 | maplength, (size_t) b * unitsz_distf_mapped); 2024-11-19T03:55:41,593 | ~~~~~~~~~ 2024-11-19T03:55:41,594 | | 2024-11-19T03:55:41,594 | size_t {aka unsigned int} 2024-11-19T03:55:41,595 command_dist.c:677:97: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2024-11-19T03:55:41,595 677 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2024-11-19T03:55:41,596 | ~~^ 2024-11-19T03:55:41,596 | | 2024-11-19T03:55:41,597 | long unsigned int 2024-11-19T03:55:41,597 | %u 2024-11-19T03:55:41,598 678 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2024-11-19T03:55:41,599 679 | maplength, (size_t) b * unitsz_distf_mapped); 2024-11-19T03:55:41,599 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:41,600 | | 2024-11-19T03:55:41,600 | unsigned int 2024-11-19T03:55:41,601 command_dist.c:715:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2024-11-19T03:55:41,602 715 | for (int n = 0; n < fco_pos[k + 1] - fco_pos[k]; n++) { 2024-11-19T03:55:41,602 | ^ 2024-11-19T03:55:41,603 command_dist.c: In function ‘mco_cbdco_nobin_dist’: 2024-11-19T03:55:41,604 command_dist.c:863:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2024-11-19T03:55:41,604 863 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2024-11-19T03:55:41,605 | ~~^ ~~~~~~~ 2024-11-19T03:55:41,606 | | | 2024-11-19T03:55:41,606 | long unsigned int size_t {aka unsigned int} 2024-11-19T03:55:41,607 | %u 2024-11-19T03:55:41,607 command_dist.c:863:93: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2024-11-19T03:55:41,608 863 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2024-11-19T03:55:41,608 | ~~^ 2024-11-19T03:55:41,609 | | 2024-11-19T03:55:41,609 | long unsigned int 2024-11-19T03:55:41,610 | %u 2024-11-19T03:55:41,611 864 | mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, maplength, 2024-11-19T03:55:41,612 | ~~~~~~~~~ 2024-11-19T03:55:41,613 | | 2024-11-19T03:55:41,614 | size_t {aka unsigned int} 2024-11-19T03:55:41,615 command_dist.c:863:98: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2024-11-19T03:55:41,615 863 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2024-11-19T03:55:41,616 | ~~^ 2024-11-19T03:55:41,616 | | 2024-11-19T03:55:41,617 | long unsigned int 2024-11-19T03:55:41,617 | %u 2024-11-19T03:55:41,618 864 | mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, maplength, 2024-11-19T03:55:41,618 865 | (size_t) b * unitsz_distf_mapped); 2024-11-19T03:55:41,619 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:41,620 | | 2024-11-19T03:55:41,620 | unsigned int 2024-11-19T03:55:41,621 command_dist.c:810:13: warning: unused variable ‘fco_pos’ [-Wunused-variable] 2024-11-19T03:55:41,622 810 | size_t *fco_pos = malloc(sizeof(size_t) * (co_dstat_readin.infile_num + 1)); 2024-11-19T03:55:41,623 | ^~~~~~~ 2024-11-19T03:55:41,623 command_dist.c:809:17: warning: unused variable ‘cbd_fcode_stat’ [-Wunused-variable] 2024-11-19T03:55:41,624 809 | struct stat cbd_fcode_stat; 2024-11-19T03:55:41,625 | ^~~~~~~~~~~~~~ 2024-11-19T03:55:41,625 command_dist.c:808:31: warning: unused variable ‘cbd_fcode_comp_index_fp’ [-Wunused-variable] 2024-11-19T03:55:41,626 808 | FILE *cbd_fcode_comp_fp, *cbd_fcode_comp_index_fp; 2024-11-19T03:55:41,627 | ^~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:41,627 command_dist.c:808:11: warning: unused variable ‘cbd_fcode_comp_fp’ [-Wunused-variable] 2024-11-19T03:55:41,628 808 | FILE *cbd_fcode_comp_fp, *cbd_fcode_comp_index_fp; 2024-11-19T03:55:41,629 | ^~~~~~~~~~~~~~~~~ 2024-11-19T03:55:41,629 command_dist.c: In function ‘mco_cbd_koc_compatible_dist’: 2024-11-19T03:55:41,630 command_dist.c:1018:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2024-11-19T03:55:41,630 1018 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2024-11-19T03:55:41,631 | ~~^ 2024-11-19T03:55:41,632 | | 2024-11-19T03:55:41,632 | long unsigned int 2024-11-19T03:55:41,633 | %u 2024-11-19T03:55:41,634 1019 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2024-11-19T03:55:41,634 | ~~~~~~~ 2024-11-19T03:55:41,635 | | 2024-11-19T03:55:41,636 | size_t {aka unsigned int} 2024-11-19T03:55:41,636 command_dist.c:1018:92: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2024-11-19T03:55:41,637 1018 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2024-11-19T03:55:41,638 | ~~^ 2024-11-19T03:55:41,638 | | 2024-11-19T03:55:41,639 | long unsigned int 2024-11-19T03:55:41,639 | %u 2024-11-19T03:55:41,640 1019 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2024-11-19T03:55:41,640 1020 | maplength, (size_t) b * unitsz_distf_mapped); 2024-11-19T03:55:41,641 | ~~~~~~~~~ 2024-11-19T03:55:41,642 | | 2024-11-19T03:55:41,642 | size_t {aka unsigned int} 2024-11-19T03:55:41,643 command_dist.c:1018:97: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2024-11-19T03:55:41,643 1018 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2024-11-19T03:55:41,644 | ~~^ 2024-11-19T03:55:41,644 | | 2024-11-19T03:55:41,645 | long unsigned int 2024-11-19T03:55:41,645 | %u 2024-11-19T03:55:41,646 1019 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2024-11-19T03:55:41,647 1020 | maplength, (size_t) b * unitsz_distf_mapped); 2024-11-19T03:55:41,648 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:41,649 | | 2024-11-19T03:55:41,649 | unsigned int 2024-11-19T03:55:41,650 command_dist.c:1034:27: warning: comparison of integer expressions of different signedness: ‘__off_t’ {aka ‘long int’} and ‘unsigned int’ [-Wsign-compare] 2024-11-19T03:55:41,651 1034 | if (s.st_size > sizeof(gidobj_t) * MCOMM_SZ) mco_mem = (gidobj_t *) realloc(mco_mem, s.st_size); 2024-11-19T03:55:41,651 | ^ 2024-11-19T03:55:41,652 command_dist.c: In function ‘mco_co_dist_core’: 2024-11-19T03:55:41,653 command_dist.c:1116:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘gidobj_t’ {aka ‘unsigned int’} [-Wsign-compare] 2024-11-19T03:55:41,654 1116 | for (int k = 1; k < unit_arrmco[ind][0] + 1; k++) { 2024-11-19T03:55:41,654 | ^ 2024-11-19T03:55:41,655 command_dist.c: In function ‘koc_dist_print_nobin’: 2024-11-19T03:55:41,655 command_dist.c:1239:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2024-11-19T03:55:41,656 1239 | for (int rid = 0; rid < ref_num; rid++) 2024-11-19T03:55:41,657 | ^ 2024-11-19T03:55:41,658 command_dist.c:1245:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2024-11-19T03:55:41,658 1245 | for (int rid = 0; rid < ref_num; rid++) { 2024-11-19T03:55:41,659 | ^ 2024-11-19T03:55:41,663 command_dist.c: In function ‘dist_print_nobin’: 2024-11-19T03:55:41,664 command_dist.c:1335:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2024-11-19T03:55:41,665 1335 | if ((N_max > NREF) || (N_max > ref_num)) { 2024-11-19T03:55:41,665 | ^ 2024-11-19T03:55:41,667 command_dist.c:1356:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2024-11-19T03:55:41,668 1356 | for (int rid = 0; rid < ref_num; rid++) { 2024-11-19T03:55:41,668 | ^ 2024-11-19T03:55:41,670 command_dist.c:1382:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2024-11-19T03:55:41,671 1382 | for (int rid = 0; rid < ref_num; rid++) 2024-11-19T03:55:41,671 | ^ 2024-11-19T03:55:42,032 command_dist.c: In function ‘run_stageI._omp_fn.1’: 2024-11-19T03:55:42,033 command_dist.c:403:21: warning: ‘com_abund_fp’ may be used uninitialized [-Wmaybe-uninitialized] 2024-11-19T03:55:42,033 403 | fwrite(tmp_mem, sizeof(unsigned short) * tmpkmerct, 1, com_abund_fp); 2024-11-19T03:55:42,034 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:42,035 command_dist.c:375:40: note: ‘com_abund_fp’ was declared here 2024-11-19T03:55:42,035 375 | FILE *com_cofp, *indexfp, *com_abund_fp; 2024-11-19T03:55:42,036 | ^~~~~~~~~~~~ 2024-11-19T03:55:42,870 command_dist.c: In function ‘get_dim_shuffle’: 2024-11-19T03:55:42,871 command_dist.c:267:36: warning: ‘%s’ directive writing up to 264 bytes into a region of size 256 [-Wformat-overflow=] 2024-11-19T03:55:42,871 267 | sprintf(shuf_infile_name, "%s.shuf", shuf_infile_name_prefix); 2024-11-19T03:55:42,872 | ^~ ~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:42,873 command_dist.c:267:9: note: ‘sprintf’ output between 6 and 270 bytes into a destination of size 256 2024-11-19T03:55:42,874 267 | sprintf(shuf_infile_name, "%s.shuf", shuf_infile_name_prefix); 2024-11-19T03:55:42,874 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:43,772 command_dist.c: In function ‘mco_cbd_co_dist’: 2024-11-19T03:55:43,773 command_dist.c:596:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:43,773 596 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2024-11-19T03:55:43,774 | ^~ ~~~~~~~~~ 2024-11-19T03:55:43,775 command_dist.c:596:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2024-11-19T03:55:43,775 596 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2024-11-19T03:55:43,776 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:43,776 command_dist.c:625:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2024-11-19T03:55:43,777 625 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2024-11-19T03:55:43,778 | ^~~~~~~~~~~~~~~ 2024-11-19T03:55:43,778 command_dist.c:625:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2024-11-19T03:55:43,779 625 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2024-11-19T03:55:43,779 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:43,780 command_dist.c:681:41: warning: ‘/mco.index.’ directive writing 11 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2024-11-19T03:55:43,781 681 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2024-11-19T03:55:43,782 | ^~~~~~~~~~~ 2024-11-19T03:55:43,782 command_dist.c:681:38: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:43,783 681 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2024-11-19T03:55:43,784 | ^~~~~~~~~~~~~~~~~ 2024-11-19T03:55:43,784 command_dist.c:681:13: note: ‘sprintf’ output between 13 and 278 bytes into a destination of size 256 2024-11-19T03:55:43,785 681 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2024-11-19T03:55:43,785 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:43,786 command_dist.c:682:35: warning: ‘/mco.’ directive writing 5 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2024-11-19T03:55:43,787 682 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2024-11-19T03:55:43,787 | ^~~~~ 2024-11-19T03:55:43,788 command_dist.c:682:32: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:43,788 682 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2024-11-19T03:55:43,789 | ^~~~~~~~~~~ 2024-11-19T03:55:43,789 command_dist.c:682:13: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2024-11-19T03:55:43,790 682 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2024-11-19T03:55:43,791 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,024 command_dist.c: In function ‘mco_cbdco_nobin_dist’: 2024-11-19T03:55:44,025 command_dist.c:763:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:44,026 763 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2024-11-19T03:55:44,026 | ^~ ~~~~~~~~~ 2024-11-19T03:55:44,027 command_dist.c:763:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2024-11-19T03:55:44,028 763 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2024-11-19T03:55:44,028 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,029 command_dist.c:790:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2024-11-19T03:55:44,030 790 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2024-11-19T03:55:44,030 | ^~~~~~~~~~~~~~~ 2024-11-19T03:55:44,031 command_dist.c:790:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2024-11-19T03:55:44,032 790 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2024-11-19T03:55:44,032 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,033 command_dist.c:823:23: warning: ‘/distance.out’ directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2024-11-19T03:55:44,034 823 | sprintf(distf, "%s/distance.out", distout_dir); 2024-11-19T03:55:44,034 | ^~~~~~~~~~~~~ 2024-11-19T03:55:44,035 command_dist.c:823:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2024-11-19T03:55:44,035 823 | sprintf(distf, "%s/distance.out", distout_dir); 2024-11-19T03:55:44,036 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,036 command_dist.c:849:39: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:44,037 849 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2024-11-19T03:55:44,038 | ^ 2024-11-19T03:55:44,039 command_dist.c:849:33: note: directive argument in the range [0, 536870912] 2024-11-19T03:55:44,039 849 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2024-11-19T03:55:44,040 | ^~~~~~~~~~ 2024-11-19T03:55:44,040 command_dist.c:849:8: note: ‘sprintf’ output 4 or more bytes (assuming 267) into a destination of size 256 2024-11-19T03:55:44,041 849 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2024-11-19T03:55:44,041 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,042 command_dist.c:851:34: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:44,042 851 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2024-11-19T03:55:44,043 | ^ 2024-11-19T03:55:44,043 command_dist.c:851:28: note: directive argument in the range [0, 536870912] 2024-11-19T03:55:44,044 851 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2024-11-19T03:55:44,045 | ^~~~~~~~~~ 2024-11-19T03:55:44,045 command_dist.c:851:9: note: ‘sprintf’ output 4 or more bytes (assuming 267) into a destination of size 256 2024-11-19T03:55:44,046 851 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2024-11-19T03:55:44,046 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,308 command_dist.c: In function ‘mco_cbd_koc_compatible_dist’: 2024-11-19T03:55:44,309 command_dist.c:927:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:44,310 927 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2024-11-19T03:55:44,310 | ^~ ~~~~~~~~~ 2024-11-19T03:55:44,311 command_dist.c:927:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2024-11-19T03:55:44,312 927 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2024-11-19T03:55:44,312 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,313 command_dist.c:956:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2024-11-19T03:55:44,313 956 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2024-11-19T03:55:44,314 | ^~~~~~~~~~~~~~~ 2024-11-19T03:55:44,315 command_dist.c:956:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2024-11-19T03:55:44,316 956 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2024-11-19T03:55:44,316 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,317 command_dist.c:990:23: warning: ‘/distance.out’ directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2024-11-19T03:55:44,318 990 | sprintf(distf, "%s/distance.out", distout_dir); 2024-11-19T03:55:44,318 | ^~~~~~~~~~~~~ 2024-11-19T03:55:44,319 command_dist.c:990:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2024-11-19T03:55:44,319 990 | sprintf(distf, "%s/distance.out", distout_dir); 2024-11-19T03:55:44,320 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,321 command_dist.c:1022:41: warning: ‘/mco.index.’ directive writing 11 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2024-11-19T03:55:44,321 1022 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2024-11-19T03:55:44,322 | ^~~~~~~~~~~ 2024-11-19T03:55:44,322 command_dist.c:1022:38: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:44,323 1022 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2024-11-19T03:55:44,324 | ^~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,324 command_dist.c:1022:13: note: ‘sprintf’ output between 13 and 278 bytes into a destination of size 256 2024-11-19T03:55:44,325 1022 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2024-11-19T03:55:44,325 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,326 command_dist.c:1023:35: warning: ‘/mco.’ directive writing 5 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2024-11-19T03:55:44,326 1023 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2024-11-19T03:55:44,327 | ^~~~~ 2024-11-19T03:55:44,327 command_dist.c:1023:32: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:44,328 1023 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2024-11-19T03:55:44,328 | ^~~~~~~~~~~ 2024-11-19T03:55:44,329 command_dist.c:1023:13: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2024-11-19T03:55:44,329 1023 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2024-11-19T03:55:44,330 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,599 command_dist.c: In function ‘combine_queries’: 2024-11-19T03:55:44,601 command_dist.c:1492:41: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2024-11-19T03:55:44,601 1492 | sprintf(one_kmerct_list_name, "%s/%s", co_dir, kmerct_list_fname); 2024-11-19T03:55:44,602 | ^ 2024-11-19T03:55:44,602 command_dist.c:1492:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2024-11-19T03:55:44,603 1492 | sprintf(one_kmerct_list_name, "%s/%s", co_dir, kmerct_list_fname); 2024-11-19T03:55:44,604 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,605 command_dist.c:1499:40: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2024-11-19T03:55:44,605 1499 | sprintf(one_infilename_name, "%s/%s", co_dir, fname_fname); 2024-11-19T03:55:44,606 | ^ 2024-11-19T03:55:44,607 command_dist.c:1499:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2024-11-19T03:55:44,607 1499 | sprintf(one_infilename_name, "%s/%s", co_dir, fname_fname); 2024-11-19T03:55:44,608 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:44,609 command_dist.c:1603:32: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:44,609 1603 | sprintf(one_stat_name, "%s/%s", co_dir, co_dstat); 2024-11-19T03:55:44,610 | ^~ ~~~~~~~~ 2024-11-19T03:55:44,610 command_dist.c:1603:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2024-11-19T03:55:44,611 1603 | sprintf(one_stat_name, "%s/%s", co_dir, co_dstat); 2024-11-19T03:55:44,612 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:45,093 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c command_dist_wrapper.c -o build/temp.linux-armv7l-cpython-311/command_dist_wrapper.o -fopenmp 2024-11-19T03:55:45,270 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c command_set.c -o build/temp.linux-armv7l-cpython-311/command_set.o -fopenmp 2024-11-19T03:55:45,708 command_set.c: In function ‘sketch_operate’: 2024-11-19T03:55:45,709 command_set.c:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2024-11-19T03:55:45,710 178 | for(int n = 0; n < fco_pos[i+1] - fco_pos[i]; n++){ 2024-11-19T03:55:45,710 | ^ 2024-11-19T03:55:45,722 command_set.c: In function ‘combin_subset_pans’: 2024-11-19T03:55:45,723 command_set.c:457:10: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2024-11-19T03:55:45,723 457 | free(co_dstat_fpath); 2024-11-19T03:55:45,724 | ^~~~~~~~~~~~~~ 2024-11-19T03:55:45,724 In file included from kssdheaders/global_basic.h:159, 2024-11-19T03:55:45,725 from command_set.c:15: 2024-11-19T03:55:45,726 /usr/include/stdlib.h:568:25: note: expected ‘void *’ but argument is of type ‘const char *’ 2024-11-19T03:55:45,726 568 | extern void free (void *__ptr) __THROW; 2024-11-19T03:55:45,727 | ~~~~~~^~~~~ 2024-11-19T03:55:45,730 command_set.c: In function ‘grouping_genomes’: 2024-11-19T03:55:45,730 command_set.c:562:10: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2024-11-19T03:55:45,731 562 | free(co_dstat_fpath); 2024-11-19T03:55:45,731 | ^~~~~~~~~~~~~~ 2024-11-19T03:55:45,732 /usr/include/stdlib.h:568:25: note: expected ‘void *’ but argument is of type ‘const char *’ 2024-11-19T03:55:45,732 568 | extern void free (void *__ptr) __THROW; 2024-11-19T03:55:45,733 | ~~~~~~^~~~~ 2024-11-19T03:55:45,898 command_set.c: In function ‘sketch_union’: 2024-11-19T03:55:45,899 command_set.c:71:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2024-11-19T03:55:45,900 71 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:45,901 | ^ 2024-11-19T03:55:45,901 command_set.c:71:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2024-11-19T03:55:45,902 71 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:45,903 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:45,903 command_set.c:82:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:45,904 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2024-11-19T03:55:45,905 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:45,905 command_set.c:82:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:45,906 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2024-11-19T03:55:45,907 | ^~~~~~~~~~ 2024-11-19T03:55:45,907 command_set.c:82:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2024-11-19T03:55:45,908 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2024-11-19T03:55:45,909 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:45,910 command_set.c:92:29: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:45,910 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2024-11-19T03:55:45,911 | ^~ ~~~~~~~~~~ 2024-11-19T03:55:45,912 command_set.c:92:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:45,912 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2024-11-19T03:55:45,913 | ^~~~~~~~~~ 2024-11-19T03:55:45,914 command_set.c:92:9: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2024-11-19T03:55:45,914 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2024-11-19T03:55:45,915 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,032 command_set.c: In function ‘sketch_operate’: 2024-11-19T03:55:46,033 command_set.c:153:29: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,034 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2024-11-19T03:55:46,034 | ^~ ~~~~~~~~~~ 2024-11-19T03:55:46,035 command_set.c:153:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,035 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2024-11-19T03:55:46,036 | ^~~~~~~~~~ 2024-11-19T03:55:46,036 command_set.c:153:9: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2024-11-19T03:55:46,037 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2024-11-19T03:55:46,037 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,038 command_set.c:155:33: warning: ‘%s’ directive writing 8 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,038 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2024-11-19T03:55:46,039 | ^~ ~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,039 command_set.c:155:29: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,040 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2024-11-19T03:55:46,042 | ^~~~~~~~~~ 2024-11-19T03:55:46,043 command_set.c:155:13: note: ‘sprintf’ output between 12 and 277 bytes into a destination of size 256 2024-11-19T03:55:46,043 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2024-11-19T03:55:46,044 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,044 command_set.c:165:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,045 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2024-11-19T03:55:46,046 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:46,047 command_set.c:165:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,047 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2024-11-19T03:55:46,048 | ^~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,049 command_set.c:165:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2024-11-19T03:55:46,050 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2024-11-19T03:55:46,050 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,051 command_set.c:169:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,052 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2024-11-19T03:55:46,052 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:46,053 command_set.c:169:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,054 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2024-11-19T03:55:46,055 | ^~~~~~~~~~ 2024-11-19T03:55:46,055 command_set.c:169:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2024-11-19T03:55:46,056 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2024-11-19T03:55:46,056 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,057 command_set.c:174:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,057 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2024-11-19T03:55:46,058 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:46,058 command_set.c:174:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,059 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2024-11-19T03:55:46,059 | ^~~~~~~~~~ 2024-11-19T03:55:46,060 command_set.c:174:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2024-11-19T03:55:46,060 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2024-11-19T03:55:46,061 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,061 command_set.c:187:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,062 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2024-11-19T03:55:46,062 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:46,063 command_set.c:187:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,063 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2024-11-19T03:55:46,064 | ^~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,064 command_set.c:187:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2024-11-19T03:55:46,065 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2024-11-19T03:55:46,066 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,066 command_set.c:192:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2024-11-19T03:55:46,067 192 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:46,068 | ^ 2024-11-19T03:55:46,068 command_set.c:192:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2024-11-19T03:55:46,069 192 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:46,070 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,215 command_set.c: In function ‘uniq_sketch_union’: 2024-11-19T03:55:46,215 command_set.c:219:39: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2024-11-19T03:55:46,216 219 | sprintf(unionco,"%s.%d",uniq_pan_prefix,i); 2024-11-19T03:55:46,217 | ^ 2024-11-19T03:55:46,217 command_set.c:219:17: note: ‘sprintf’ output between 11 and 21 bytes into a destination of size 20 2024-11-19T03:55:46,218 219 | sprintf(unionco,"%s.%d",uniq_pan_prefix,i); 2024-11-19T03:55:46,219 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,219 command_set.c:234:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2024-11-19T03:55:46,220 234 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:46,221 | ^ 2024-11-19T03:55:46,222 command_set.c:234:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2024-11-19T03:55:46,223 234 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:46,223 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,224 command_set.c:247:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,224 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2024-11-19T03:55:46,225 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:46,225 command_set.c:247:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,226 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2024-11-19T03:55:46,226 | ^~~~~~~~~~ 2024-11-19T03:55:46,227 command_set.c:247:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2024-11-19T03:55:46,227 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2024-11-19T03:55:46,228 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,228 command_set.c:259:29: warning: ‘%s’ directive writing 8 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,229 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2024-11-19T03:55:46,229 | ^~ ~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,230 command_set.c:259:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,231 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2024-11-19T03:55:46,231 | ^~~~~~~~~~ 2024-11-19T03:55:46,232 command_set.c:259:9: note: ‘sprintf’ output between 12 and 277 bytes into a destination of size 256 2024-11-19T03:55:46,233 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2024-11-19T03:55:46,233 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,365 command_set.c: In function ‘combin_pans’: 2024-11-19T03:55:46,366 command_set.c:297:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,366 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2024-11-19T03:55:46,367 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:46,368 command_set.c:297:25: note: directive argument in the range [0, 1073741823] 2024-11-19T03:55:46,368 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2024-11-19T03:55:46,369 | ^~~~~~~~~~ 2024-11-19T03:55:46,369 command_set.c:297:9: note: ‘sprintf’ output between 10 and 274 bytes into a destination of size 256 2024-11-19T03:55:46,370 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2024-11-19T03:55:46,371 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,371 command_set.c:300:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,372 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2024-11-19T03:55:46,373 | ^~ ~~~~~~~~~~ 2024-11-19T03:55:46,373 command_set.c:300:25: note: directive argument in the range [0, 1073741823] 2024-11-19T03:55:46,374 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2024-11-19T03:55:46,375 | ^~~~~~~~~~ 2024-11-19T03:55:46,376 command_set.c:300:9: note: ‘sprintf’ output between 16 and 280 bytes into a destination of size 256 2024-11-19T03:55:46,376 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2024-11-19T03:55:46,377 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,378 command_set.c:342:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2024-11-19T03:55:46,378 342 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:46,379 | ^ 2024-11-19T03:55:46,379 command_set.c:342:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2024-11-19T03:55:46,380 342 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:46,380 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,617 command_set.c: In function ‘combin_subset_pans’: 2024-11-19T03:55:46,618 command_set.c:469:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,618 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2024-11-19T03:55:46,619 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:46,619 command_set.c:469:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,620 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2024-11-19T03:55:46,620 | ^~~~~~~~~~ 2024-11-19T03:55:46,621 command_set.c:469:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2024-11-19T03:55:46,622 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2024-11-19T03:55:46,622 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,623 command_set.c:475:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,623 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2024-11-19T03:55:46,624 | ^~ ~~~~~~~~~~ 2024-11-19T03:55:46,624 command_set.c:475:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,625 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2024-11-19T03:55:46,625 | ^~~~~~~~~~ 2024-11-19T03:55:46,626 command_set.c:475:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2024-11-19T03:55:46,627 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2024-11-19T03:55:46,627 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,628 command_set.c:481:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,629 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2024-11-19T03:55:46,630 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:46,630 command_set.c:481:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,631 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2024-11-19T03:55:46,632 | ^~~~~~~~~~ 2024-11-19T03:55:46,632 command_set.c:481:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2024-11-19T03:55:46,633 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2024-11-19T03:55:46,634 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,634 command_set.c:512:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,635 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2024-11-19T03:55:46,636 | ^~ ~~~~~~~~~~ 2024-11-19T03:55:46,637 command_set.c:512:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,637 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2024-11-19T03:55:46,637 | ^~~~~~~~~~ 2024-11-19T03:55:46,638 command_set.c:512:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2024-11-19T03:55:46,638 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2024-11-19T03:55:46,639 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,639 command_set.c:523:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2024-11-19T03:55:46,640 523 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:46,640 | ^ 2024-11-19T03:55:46,641 command_set.c:523:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2024-11-19T03:55:46,642 523 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:46,642 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,866 command_set.c: In function ‘grouping_genomes’: 2024-11-19T03:55:46,867 command_set.c:574:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,867 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2024-11-19T03:55:46,868 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:46,868 command_set.c:574:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,869 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2024-11-19T03:55:46,870 | ^~~~~~~~~~ 2024-11-19T03:55:46,870 command_set.c:574:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2024-11-19T03:55:46,871 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2024-11-19T03:55:46,871 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,872 command_set.c:580:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,873 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2024-11-19T03:55:46,873 | ^~ ~~~~~~~~~~ 2024-11-19T03:55:46,874 command_set.c:580:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,875 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2024-11-19T03:55:46,875 | ^~~~~~~~~~ 2024-11-19T03:55:46,876 command_set.c:580:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2024-11-19T03:55:46,876 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2024-11-19T03:55:46,877 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,878 command_set.c:612:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,878 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2024-11-19T03:55:46,879 | ^~ ~~~~~~~~~~~ 2024-11-19T03:55:46,879 command_set.c:612:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,880 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2024-11-19T03:55:46,881 | ^~~~~~~~~~ 2024-11-19T03:55:46,882 command_set.c:612:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2024-11-19T03:55:46,882 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2024-11-19T03:55:46,883 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,884 command_set.c:634:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2024-11-19T03:55:46,884 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2024-11-19T03:55:46,885 | ^~ ~~~~~~~~~~ 2024-11-19T03:55:46,885 command_set.c:634:25: note: directive argument in the range [-2147483644, 2147483646] 2024-11-19T03:55:46,886 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2024-11-19T03:55:46,887 | ^~~~~~~~~~ 2024-11-19T03:55:46,887 command_set.c:634:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2024-11-19T03:55:46,888 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2024-11-19T03:55:46,888 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:46,889 command_set.c:645:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2024-11-19T03:55:46,889 645 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:46,890 | ^ 2024-11-19T03:55:46,890 command_set.c:645:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2024-11-19T03:55:46,891 645 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2024-11-19T03:55:46,892 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-11-19T03:55:47,172 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c command_shuffle.c -o build/temp.linux-armv7l-cpython-311/command_shuffle.o -fopenmp 2024-11-19T03:55:47,491 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c global_basic.c -o build/temp.linux-armv7l-cpython-311/global_basic.o -fopenmp 2024-11-19T03:55:47,913 global_basic.c: In function ‘organize_infile_list’: 2024-11-19T03:55:47,914 global_basic.c:195:20: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] 2024-11-19T03:55:47,915 195 | while (isspace(*buf)) buf++; 2024-11-19T03:55:47,916 | ^~~~~~~ 2024-11-19T03:55:47,916 global_basic.c:35:1: note: include ‘’ or provide a declaration of ‘isspace’ 2024-11-19T03:55:47,917 34 | #include 2024-11-19T03:55:47,918 +++ |+#include 2024-11-19T03:55:47,918 35 | 2024-11-19T03:55:47,919 global_basic.c:201:69: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2024-11-19T03:55:47,920 201 | "the input list: %s\n %dth line: %s has %lu characters exceed the maximal allowed length %d", 2024-11-19T03:55:47,921 | ~~^ 2024-11-19T03:55:47,922 | | 2024-11-19T03:55:47,923 | long unsigned int 2024-11-19T03:55:47,924 | %u 2024-11-19T03:55:47,925 202 | list_path, file_num, buf, strlen(buf), PATHLEN); 2024-11-19T03:55:47,925 | ~~~~~~~~~~~ 2024-11-19T03:55:47,926 | | 2024-11-19T03:55:47,927 | size_t {aka unsigned int} 2024-11-19T03:55:47,929 global_basic.c:233:69: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2024-11-19T03:55:47,930 233 | "the input list: %s\n %dth line: %s has %lu characters exceed the maximal allowed length %d", 2024-11-19T03:55:47,931 | ~~^ 2024-11-19T03:55:47,931 | | 2024-11-19T03:55:47,932 | long unsigned int 2024-11-19T03:55:47,933 | %u 2024-11-19T03:55:47,934 234 | list_path, file_num, buf, strlen(buf), PATHLEN); 2024-11-19T03:55:47,935 | ~~~~~~~~~~~ 2024-11-19T03:55:47,935 | | 2024-11-19T03:55:47,936 | size_t {aka unsigned int} 2024-11-19T03:55:48,714 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c iseq2comem.c -o build/temp.linux-armv7l-cpython-311/iseq2comem.o -fopenmp 2024-11-19T03:55:48,900 iseq2comem.c: In function ‘reads2mco’: 2024-11-19T03:55:48,900 iseq2comem.c:156:18: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,901 156 | if (base > TL) { 2024-11-19T03:55:48,902 | ^ 2024-11-19T03:55:48,902 iseq2comem.c:160:26: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,903 160 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2024-11-19T03:55:48,904 | ^~ 2024-11-19T03:55:48,904 iseq2comem.c:160:50: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,905 160 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2024-11-19T03:55:48,906 | ^ 2024-11-19T03:55:48,906 iseq2comem.c: In function ‘fasta2co’: 2024-11-19T03:55:48,907 iseq2comem.c:239:18: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,907 239 | if (base > TL) { 2024-11-19T03:55:48,908 | ^ 2024-11-19T03:55:48,909 iseq2comem.c:243:26: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,909 243 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2024-11-19T03:55:48,910 | ^~ 2024-11-19T03:55:48,911 iseq2comem.c:243:50: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,911 243 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2024-11-19T03:55:48,912 | ^ 2024-11-19T03:55:48,913 iseq2comem.c: In function ‘fastq2co’: 2024-11-19T03:55:48,913 iseq2comem.c:272:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long long unsigned int’ [-Wsign-compare] 2024-11-19T03:55:48,914 272 | if (M >= CT_MAX) fprintf(stderr, "fastq2co(): Occurence num should smaller than %d", (int) CT_MAX); 2024-11-19T03:55:48,915 | ^~ 2024-11-19T03:55:48,916 iseq2comem.c:318:18: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,916 318 | if (base > TL) { 2024-11-19T03:55:48,917 | ^ 2024-11-19T03:55:48,917 iseq2comem.c:322:26: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,918 322 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2024-11-19T03:55:48,918 | ^~ 2024-11-19T03:55:48,919 iseq2comem.c:322:50: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,920 322 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2024-11-19T03:55:48,920 | ^ 2024-11-19T03:55:48,921 iseq2comem.c:341:44: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,921 341 | if (!((co[n] & CT_MAX) < M)) co[n] |= CT_MAX; 2024-11-19T03:55:48,922 | ^ 2024-11-19T03:55:48,923 iseq2comem.c: In function ‘fastq2koc’: 2024-11-19T03:55:48,923 iseq2comem.c:402:18: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,924 402 | if (base > TL) { 2024-11-19T03:55:48,924 | ^ 2024-11-19T03:55:48,926 iseq2comem.c:406:26: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,926 406 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2024-11-19T03:55:48,927 | ^~ 2024-11-19T03:55:48,928 iseq2comem.c:406:50: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,929 406 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2024-11-19T03:55:48,930 | ^ 2024-11-19T03:55:48,930 iseq2comem.c: In function ‘mt_shortreads2koc’: 2024-11-19T03:55:48,931 iseq2comem.c:582:34: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,932 582 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2024-11-19T03:55:48,932 | ^~ 2024-11-19T03:55:48,933 iseq2comem.c:582:58: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2024-11-19T03:55:48,934 582 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2024-11-19T03:55:48,934 | ^ 2024-11-19T03:55:50,276 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c mman.c -o build/temp.linux-armv7l-cpython-311/mman.o -fopenmp 2024-11-19T03:55:50,332 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c mytime.c -o build/temp.linux-armv7l-cpython-311/mytime.o -fopenmp 2024-11-19T03:55:50,455 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.11 -c pykssd.c -o build/temp.linux-armv7l-cpython-311/pykssd.o -fopenmp 2024-11-19T03:55:50,862 pykssd.c: In function ‘py_dist_dispatch’: 2024-11-19T03:55:50,863 pykssd.c:329:13: warning: unused variable ‘state1’ [-Wunused-variable] 2024-11-19T03:55:50,863 329 | int state1 = dist_dispatch(&dist_opt_val1); 2024-11-19T03:55:50,864 | ^~~~~~ 2024-11-19T03:55:50,865 pykssd.c:386:13: warning: unused variable ‘state2’ [-Wunused-variable] 2024-11-19T03:55:50,866 386 | int state2 = dist_dispatch(&dist_opt_val2); 2024-11-19T03:55:50,866 | ^~~~~~ 2024-11-19T03:55:50,868 pykssd.c:510:13: warning: unused variable ‘state4’ [-Wunused-variable] 2024-11-19T03:55:50,869 510 | int state4 = dist_dispatch(&dist_opt_val4); 2024-11-19T03:55:50,870 | ^~~~~~ 2024-11-19T03:55:51,508 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/co2mco.o build/temp.linux-armv7l-cpython-311/command_composite.o build/temp.linux-armv7l-cpython-311/command_dist.o build/temp.linux-armv7l-cpython-311/command_dist_wrapper.o build/temp.linux-armv7l-cpython-311/command_set.o build/temp.linux-armv7l-cpython-311/command_shuffle.o build/temp.linux-armv7l-cpython-311/global_basic.o build/temp.linux-armv7l-cpython-311/iseq2comem.o build/temp.linux-armv7l-cpython-311/mman.o build/temp.linux-armv7l-cpython-311/mytime.o build/temp.linux-armv7l-cpython-311/pykssd.o -L/usr/lib/arm-linux-gnueabihf -lz -o build/lib.linux-armv7l-cpython-311/kssd.cpython-311-arm-linux-gnueabihf.so -fopenmp 2024-11-19T03:55:51,681 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-11-19T03:55:51,681 !! 2024-11-19T03:55:51,682 ******************************************************************************** 2024-11-19T03:55:51,683 Please avoid running ``setup.py`` directly. 2024-11-19T03:55:51,684 Instead, use pypa/build, pypa/installer or other 2024-11-19T03:55:51,684 standards-based tools. 2024-11-19T03:55:51,686 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-11-19T03:55:51,686 ******************************************************************************** 2024-11-19T03:55:51,688 !! 2024-11-19T03:55:51,688 self.initialize_options() 2024-11-19T03:55:51,711 installing to build/bdist.linux-armv7l/wheel 2024-11-19T03:55:51,712 running install 2024-11-19T03:55:51,737 running install_lib 2024-11-19T03:55:51,766 creating build/bdist.linux-armv7l/wheel 2024-11-19T03:55:51,768 copying build/lib.linux-armv7l-cpython-311/kssd.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/. 2024-11-19T03:55:51,776 copying build/lib.linux-armv7l-cpython-311/kssdutils.py -> build/bdist.linux-armv7l/wheel/. 2024-11-19T03:55:51,778 running install_egg_info 2024-11-19T03:55:51,812 Copying kssdutils.egg-info to build/bdist.linux-armv7l/wheel/./kssdutils-1.0.1-py3.11.egg-info 2024-11-19T03:55:51,823 running install_scripts 2024-11-19T03:55:51,877 creating build/bdist.linux-armv7l/wheel/kssdutils-1.0.1.dist-info/WHEEL 2024-11-19T03:55:51,880 creating '/tmp/pip-wheel-mu6ocj7y/kssdutils-1.0.1-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-11-19T03:55:51,965 adding 'kssd.cpython-311-arm-linux-gnueabihf.so' 2024-11-19T03:55:51,969 adding 'kssdutils.py' 2024-11-19T03:55:51,971 adding 'kssdutils-1.0.1.dist-info/METADATA' 2024-11-19T03:55:51,973 adding 'kssdutils-1.0.1.dist-info/WHEEL' 2024-11-19T03:55:51,975 adding 'kssdutils-1.0.1.dist-info/dependency_links.txt' 2024-11-19T03:55:51,976 adding 'kssdutils-1.0.1.dist-info/top_level.txt' 2024-11-19T03:55:51,977 adding 'kssdutils-1.0.1.dist-info/RECORD' 2024-11-19T03:55:51,982 removing build/bdist.linux-armv7l/wheel 2024-11-19T03:55:52,127 Building wheel for kssdutils (setup.py): finished with status 'done' 2024-11-19T03:55:52,131 Created wheel for kssdutils: filename=kssdutils-1.0.1-cp311-cp311-linux_armv7l.whl size=178546 sha256=88788d94e7e118cfdf4e2cb04c558d2032ffa4f9352b663efd1a76f098c9f31d 2024-11-19T03:55:52,132 Stored in directory: /tmp/pip-ephem-wheel-cache-akcrv81d/wheels/1b/50/4b/3bf5bc30aa8f7936d202e813503d8ed121317dcaa6b19e4d31 2024-11-19T03:55:52,141 Successfully built kssdutils 2024-11-19T03:55:52,149 Removed build tracker: '/tmp/pip-build-tracker-cf0z49hz'