2024-11-29T05:37:18,266 Created temporary directory: /tmp/pip-build-tracker-0_48mpau
2024-11-29T05:37:18,267 Initialized build tracking at /tmp/pip-build-tracker-0_48mpau
2024-11-29T05:37:18,268 Created build tracker: /tmp/pip-build-tracker-0_48mpau
2024-11-29T05:37:18,268 Entered build tracker: /tmp/pip-build-tracker-0_48mpau
2024-11-29T05:37:18,269 Created temporary directory: /tmp/pip-wheel-o4ad8_nw
2024-11-29T05:37:18,273 Created temporary directory: /tmp/pip-ephem-wheel-cache-2_akjw9p
2024-11-29T05:37:18,318 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-11-29T05:37:18,320 2 location(s) to search for versions of nmdc-runtime:
2024-11-29T05:37:18,320 * https://pypi.org/simple/nmdc-runtime/
2024-11-29T05:37:18,320 * https://www.piwheels.org/simple/nmdc-runtime/
2024-11-29T05:37:18,321 Fetching project page and analyzing links: https://pypi.org/simple/nmdc-runtime/
2024-11-29T05:37:18,322 Getting page https://pypi.org/simple/nmdc-runtime/
2024-11-29T05:37:18,323 Found index url https://pypi.org/simple/
2024-11-29T05:37:18,542 Fetched page https://pypi.org/simple/nmdc-runtime/ as application/vnd.pypi.simple.v1+json
2024-11-29T05:37:18,555   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/ba/44/acaca01a3fdf26351a427b58ca793a2702c1157d5125d3101029e99d0ab0/nmdc_runtime-0.1.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-11-29T05:37:18,556   Found link https://files.pythonhosted.org/packages/3d/56/9ddca8b74ed798352aca6ba02e98c7bfbf232ccb237660b2488f7da8a39e/nmdc_runtime-0.1.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8), version: 0.1.0
2024-11-29T05:37:18,557   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/38/59/cb99a0e180d0de57a68cdd118ed305b68d97561a7a82da80d48992236382/nmdc_runtime-0.1.1-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-11-29T05:37:18,558   Found link https://files.pythonhosted.org/packages/31/0d/353b462ef1bde0cdb4f4d36b943b19f4844070641e2ad25cf4b39e10154d/nmdc_runtime-0.1.1.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8), version: 0.1.1
2024-11-29T05:37:18,558   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/c9/32/65aa3b8e7dae9e5c896fa1fcaf559fb1784d824759c78b4c89682c681275/nmdc_runtime-0.1.3-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-11-29T05:37:18,559   Found link https://files.pythonhosted.org/packages/f5/f9/e540bd39ae5b2f834f09138219ba5c9beab7797821f063b93e2f0cb48c30/nmdc_runtime-0.1.3.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8), version: 0.1.3
2024-11-29T05:37:18,560   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/91/f4/3b90e1ea7442d196974acf301cef0e2b867f811bb288b9d39cf9c75c9af0/nmdc_runtime-0.1.5-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-11-29T05:37:18,561   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/44/e7/dbd9b95d667293a0c7623f51f920d3e4eec16fc97c449668591ac2e404c0/nmdc_runtime-0.1.6-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-11-29T05:37:18,562   Found link https://files.pythonhosted.org/packages/82/26/5ed0f7ec2108a87e7f3689f6d8daa6ff3aca90fdb10ede7b65f8c6b46fa3/nmdc_runtime-0.1.6.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8), version: 0.1.6
2024-11-29T05:37:18,563   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/25/e1/ace3cd495b80bf86380dd90c4aaa0c198e9575630b46565b41301684cd71/nmdc_runtime-1.0.1-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,563   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/91/13/7b4668fac66e4189055f043538ff82b1941bf1c26ec3a0c6b43881f94282/nmdc_runtime-1.0.4-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,564   Found link https://files.pythonhosted.org/packages/9e/90/ec35cff97b890d3460295c3429d5c8422d82a38d959dcb69dce2ce8837c0/nmdc_runtime-1.0.4.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.4
2024-11-29T05:37:18,566   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/ef/0b/514c8e6402048965952aa4388d7c02325fdaa593b0e47c16bf2f764a0352/nmdc_runtime-1.0.5-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,566   Found link https://files.pythonhosted.org/packages/a6/d4/a045432ad1e5aa78fe551f709acefb99c2daa2900a79764b6e4b24a3ff84/nmdc_runtime-1.0.5.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.5
2024-11-29T05:37:18,567   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/ba/50/3d96523a550ade0100a5119d6db39d4d50c53c0ce641d1122b28065ddd59/nmdc_runtime-1.0.6-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,568   Found link https://files.pythonhosted.org/packages/1b/14/332338c0e11e12cfc9cef95954d336975121bf9bf6bc5c9208dca1b078da/nmdc_runtime-1.0.6.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.6
2024-11-29T05:37:18,568   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/83/aa/294ca7f53b217ca8dd0788b77d08fb5c3688780e44bc3d111c06540ef05f/nmdc_runtime-1.0.7-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,569   Found link https://files.pythonhosted.org/packages/b5/d2/a8d599d0fd9c6a8e0e50d4e564acb5e8e3e956832e410c76a46d76f86ccb/nmdc_runtime-1.0.7.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.7
2024-11-29T05:37:18,570   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/de/d5/c7c62f5f39ec86d5ac6a716db4ca2e462bd295c9c0cd4bad4b3e01ccab17/nmdc_runtime-1.0.8-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,571   Found link https://files.pythonhosted.org/packages/d5/81/4f13b4623de2904fc48c01a4d2e58a09f274a65db23ee0038a0ff56bb08a/nmdc_runtime-1.0.8.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.8
2024-11-29T05:37:18,572   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/e5/37/b7e7eb1a426c76c4ab05590350bfce3e258bffe2ca8a069fa253bde96df9/nmdc_runtime-1.0.9-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,573   Found link https://files.pythonhosted.org/packages/b0/01/0d438371437d3059ca4a608b7b594c41dc79fcd58922d26379101a6345ef/nmdc_runtime-1.0.9.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.9
2024-11-29T05:37:18,574   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/65/d3/d255f6adef1b2dae59f12cd337641efee9474897716115fc5e11c95d4fe1/nmdc_runtime-1.0.10-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,574   Found link https://files.pythonhosted.org/packages/b1/f4/82f9056ec7de3de14ef373f21c9439963f373697be818989ec08d2329f34/nmdc_runtime-1.0.10.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.10
2024-11-29T05:37:18,575   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/53/77/c73fdac212bf196c2e3dfbf8347d160b427dff8f11e069c1a5972ce90c43/nmdc_runtime-1.0.11-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,576   Found link https://files.pythonhosted.org/packages/67/81/5b6010837872165ff671121bfff01d29e103997d7b394eae5453f4bdd1b9/nmdc_runtime-1.0.11.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.11
2024-11-29T05:37:18,577   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/13/bd/6dd46143615928b35bc35b6f246fff3cb4c55d35a8555d47f7cd7565a605/nmdc_runtime-1.0.12-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,578   Found link https://files.pythonhosted.org/packages/73/08/56746d739798869d3ed33ac1e8685a044effc638e5f60e0989334e3df803/nmdc_runtime-1.0.12.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.12
2024-11-29T05:37:18,579   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/7c/80/a8c1f0d64d6a38faa36be239477f893488fa2e80bbd9d3699996544fd35a/nmdc_runtime-1.0.13-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,579   Found link https://files.pythonhosted.org/packages/dd/eb/a7a49613cffd4d9835cacbb61b9b8b682346b7f7257b025e6faa922f3106/nmdc_runtime-1.0.13.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.13
2024-11-29T05:37:18,580   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/17/8d/0c38aaa9d5581eda908809321eb9218b90b859c2087483513edfe30e0ae9/nmdc_runtime-1.0.14-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,581   Found link https://files.pythonhosted.org/packages/aa/6b/6e5ecdb95c3060c389779c16813ebbd437c61519d0c923bec953b80f8b6e/nmdc_runtime-1.0.14.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.14
2024-11-29T05:37:18,581   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/24/60/40b5389c4d34db0aefc25a4f407a1965d297a51ce443ffcc54fcf5f0a30f/nmdc_runtime-1.1.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,582   Found link https://files.pythonhosted.org/packages/f1/af/d3edeb153597d1918967ef00cf6be6621c21043ba1549fa0f37273a01a7d/nmdc_runtime-1.1.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.1.0
2024-11-29T05:37:18,583   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/2d/7b/c1998db0a46f571bbc7e208e7b3a55afb254a6d1413a5fbd500368128aa9/nmdc_runtime-1.2.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,584   Found link https://files.pythonhosted.org/packages/67/bc/bd9a296ea7257aaa0c72a1f9be3a197f6e2d71c337574e3d16198cd6242e/nmdc_runtime-1.2.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.2.0
2024-11-29T05:37:18,585   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/b9/49/7b595d1c88a2b6de2769a572b80f625239a3ac06eef26ca283051c875498/nmdc_runtime-1.3.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,586   Found link https://files.pythonhosted.org/packages/fc/5b/4468b0402403aeecb9bf10b5381dd759e1b8ca11a5793c7c1f7e600f8068/nmdc_runtime-1.3.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.3.0
2024-11-29T05:37:18,587   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/c8/c2/1f5e8d8d256e40a4e0d8cbad5fab81c25be0ada15c476e620a63675b50b6/nmdc_runtime-1.3.1-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,587   Found link https://files.pythonhosted.org/packages/56/c2/c4984f6a63857d1d70ef9582399dbea65ef4a1a88da674a87edb58496b54/nmdc_runtime-1.3.1.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.3.1
2024-11-29T05:37:18,588   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/8c/8d/89cf7fa867334d4cd9f849f97c8d623b65c346d6a6f83ba2e046e11315e6/nmdc_runtime-1.4.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,589   Found link https://files.pythonhosted.org/packages/07/77/998f2495ca9eddc299ed24d8ba958663909551b1800572a6aa7e19fdb3e9/nmdc_runtime-1.4.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.4.0
2024-11-29T05:37:18,590   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/d0/3c/9e4791f6589e5384c17fd18c89ad65627f34516a1af1cc4c54050fae0597/nmdc_runtime-1.4.1-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,591   Found link https://files.pythonhosted.org/packages/b0/09/b94d33006ca59c2d28e32815864c47e4eb351a76e352ed70035b9ca62f87/nmdc_runtime-1.4.1.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.4.1
2024-11-29T05:37:18,591   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/dc/7a/39b200b08d42ffa05fb9fd7bad491e1c68bc0a3bc7940cd62f78c8d60c7e/nmdc_runtime-1.4.2-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,592   Found link https://files.pythonhosted.org/packages/56/3a/a1f9f57b1f9141b0ed2d994f6cf80f087448513e33b930ed1b26ee348e5a/nmdc_runtime-1.4.2.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.4.2
2024-11-29T05:37:18,592   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/3d/b3/f32023ae4b000fed26c5476fcff7a67527c629c045117d250ea300ddfc92/nmdc_runtime-1.5.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,594   Found link https://files.pythonhosted.org/packages/d0/b4/dfc63bd08b9053584a795b5fed73a56a5e093b693a30234c87be3225e2bc/nmdc_runtime-1.5.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.5.0
2024-11-29T05:37:18,594   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/db/47/2afb6a3406b34190c7086be19bbdceea8fb377bbb29e2c9ad25507b8007a/nmdc_runtime-1.6.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,595   Found link https://files.pythonhosted.org/packages/fe/17/a39c3f09d5293e873e952dbeddd435631405f9b87f98ed3d6701f558d657/nmdc_runtime-1.6.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.6.0
2024-11-29T05:37:18,596   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/b3/2f/c48817497df8b7922a31341860f3029b0269cb2b4f6d4725c55007c14fd8/nmdc_runtime-1.7.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,597   Found link https://files.pythonhosted.org/packages/e6/11/a6f7e020fa47cadb28972e41e1df5c120f7fa9977a41f7c251442b941001/nmdc_runtime-1.7.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.7.0
2024-11-29T05:37:18,597   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/7d/fc/35f5616c87cb148789b8c636a11333d71902cd218895c94acee56e5e7979/nmdc_runtime-1.8.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,598   Found link https://files.pythonhosted.org/packages/80/64/f0a15d5171e9242f322a0b4e4b9cb4e334fe2805aeccb8a21749575f2ca9/nmdc_runtime-1.8.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.8.0
2024-11-29T05:37:18,599   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/11/bd/7e4067469099c797692477f6fa617e65325676ae7c484c05dcce7091aecd/nmdc_runtime-1.9.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,600   Found link https://files.pythonhosted.org/packages/98/87/74b97999f1f5e4d99a6070375be390566455f4bc809b6743e2d9e1b42a29/nmdc_runtime-1.9.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.9.0
2024-11-29T05:37:18,600   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/f1/7f/31e1b514bb0ae76e5a4f693e61cc83327933db84148cff35f0c8b1dc9d5f/nmdc_runtime-1.10.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,602   Found link https://files.pythonhosted.org/packages/be/5a/48fb4b8d21dfe38218d374621a32854a9a93b97c558362a5c3fa63ef4da8/nmdc_runtime-1.10.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.10.0
2024-11-29T05:37:18,602   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/e5/a7/0ca2690a4c3d422a2d390b205cb298b5ebd892899f1d8ab6b4d1bca4943e/nmdc_runtime-2.0.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,603   Found link https://files.pythonhosted.org/packages/8e/d3/3c76090a49948ec21634124ce4ff6ff502149ceb2c0c9b7ce221d4567c69/nmdc_runtime-2.0.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 2.0.0
2024-11-29T05:37:18,604   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/0e/a2/0c6cf7c05813eb4ef23c97942e776613569e900ff1bf81b26e00034cc397/nmdc_runtime-2.0.1-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,604   Found link https://files.pythonhosted.org/packages/ec/0a/73e89df1d4c465949b8d7a5f90135ebf0f58e5b2bb72a5d2599006f3ddb6/nmdc_runtime-2.0.1.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 2.0.1
2024-11-29T05:37:18,605   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/50/b8/0442fe43927c849de58237d5ffa74a1b9aa0693e558afc15ecce2a53eb17/nmdc_runtime-2.1.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,606   Found link https://files.pythonhosted.org/packages/bb/19/6920c48bc4556225a6e8ae176ba72fe29db5547b9568708bdd5a1ab02485/nmdc_runtime-2.1.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 2.1.0
2024-11-29T05:37:18,606   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/7a/f2/a8c0f16a2b0307410507580b4553b162f2048c87b11699cb6d350fd74eaf/nmdc_runtime-2.1.1-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,607   Found link https://files.pythonhosted.org/packages/5f/76/3ef1e8c2d4513fbe14bf428d10d4129548c67ddf88f0302e4bd949941077/nmdc_runtime-2.1.1.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 2.1.1
2024-11-29T05:37:18,608 Fetching project page and analyzing links: https://www.piwheels.org/simple/nmdc-runtime/
2024-11-29T05:37:18,609 Getting page https://www.piwheels.org/simple/nmdc-runtime/
2024-11-29T05:37:18,611 Found index url https://www.piwheels.org/simple/
2024-11-29T05:37:18,776 Fetched page https://www.piwheels.org/simple/nmdc-runtime/ as text/html
2024-11-29T05:37:18,785   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-2.1.0-py3-none-any.whl#sha256=ef55f696a708ae49b686f7d4d1ef806257f72cd0cb7d5908107690526f2c1e29 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,786   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.10.0-py3-none-any.whl#sha256=628a7aca5a85ab1b7d7d0713bb2e4c690331a7dc2521f248ac156e68eda3ba3e (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,786   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.9.0-py3-none-any.whl#sha256=d3cf3150305b0665b23f4d02f474bdb686660cf448b3aff04b0052ceee6fe15d (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,787   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.8.0-py3-none-any.whl#sha256=cdf8b2de7dfcd00fc4be7a17427151b6eede167f14c5b7bc956ff2af10d6307c (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,788   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.7.0-py3-none-any.whl#sha256=3103fc7a5156dd9c0cf2d9cf92ef6bee585e25e126a0d0b4a9ace6e1344e8823 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,789   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.6.0-py3-none-any.whl#sha256=d7d4c1c29da4c0d3d5912df92ae1aaeed44aa0b72bb1201efcdee74c5a0b9542 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,789   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.4.2-py3-none-any.whl#sha256=1a519af1939692b35d8139c1d1c7b24a696479dc8d4cfe7d575e7ef6db175160 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,790   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.4.1-py3-none-any.whl#sha256=7514bd832aaa945a66441e2ea0c6a5b9adb695265277283906d3c3f89ffa14ea (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,790   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.4.0-py3-none-any.whl#sha256=c0c1857be281c9b6ba47add0c81335aa1e028ec936f71bade6f813c0e07ef9a5 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,791   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.3.1-py3-none-any.whl#sha256=e834d6af867ba48cdb583ced165576b8822b7deac757a402baf9864304792e0d (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,791   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.3.0-py3-none-any.whl#sha256=0470dc180053c632fdedb5c4790ae0a3c0a29166f757dbe51f2e9bb5016d728e (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,792   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.2.0-py3-none-any.whl#sha256=21a501b7fa193fe956a1a992fdcd4388ae80f57fa6354e14e2855edde761c39d (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,793   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.1.0-py3-none-any.whl#sha256=d53b1a410a95e2e14bfd7a88dd3ea3163a079acd47eb8f2b197e6aef02689ac3 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,794   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.14-py3-none-any.whl#sha256=7ea5bd4e9b9348aee578b0f6c64bdc35467a36da334a44d91c50fa1417405f13 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,794   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.13-py3-none-any.whl#sha256=31d876ee80407dc4049b210ed8c017b77723f7ad78bf89ea9ef8b07f1ea8682a (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,795   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.12-py3-none-any.whl#sha256=87d81eb829ad73563e0fa371336f03d59417e00c9dcc12d943738fa67c0287fc (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,795   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.11-py3-none-any.whl#sha256=b48456c6ad565bcca33642f19ca745d5e57105419ae1dc96efb9f51b349e7fbd (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,797   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.10-py3-none-any.whl#sha256=9575befdcc66f9de5c0c08719aa4e5986f3b8d6ec2ad11a8a8f0595ceb4b17bf (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,797   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.9-py3-none-any.whl#sha256=22b2fbd19c0c6b4fb04444a368d8051e3dfd8d8198d378f00d29177d8b6daf8e (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,798   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.8-py3-none-any.whl#sha256=b2b81313cc150e7186a150993c0df3fddcce6c61142bce79e1e6a73f689c8caa (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,798   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.7-py3-none-any.whl#sha256=bab6ec3cffaa34d52dc0205b83159f6e923847ddfdf494b0c93160e3ba061723 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,799   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.6-py3-none-any.whl#sha256=e15ec359d56e12a347909b6f8a8e95dfd0bc3c62eeef86496220cfdd29338c4b (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,799   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.5-py3-none-any.whl#sha256=56e0d62bd48bfa043e59ef94e033c8f09581b0449928cc4ac9ec1f6052ff0a39 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,800   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.4-py3-none-any.whl#sha256=5e175512550dc24c2d30b9075bb2914cafdb2c653aa60975cde6c63a2829d542 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-11-29T05:37:18,801   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-0.1.6-py3-none-any.whl#sha256=5a8149e8f3e41c8fd242361d7a5918eb005bfd8e8c5639321d4ecbfe917a1292 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-11-29T05:37:18,802   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-0.1.3-py3-none-any.whl#sha256=67c7cf263830bd4c4c62dff28d0073f938ecb1055f487f43a15f935ef54e461d (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-11-29T05:37:18,802   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-0.1.1-py3-none-any.whl#sha256=f960697437ecf9bf8309e94fbb729ae1440468a7de29b264a61fb6de39368762 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-11-29T05:37:18,803   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-0.1.0-py3-none-any.whl#sha256=7a67f7282667a4265a04bf134156531046957b197da284d9550cf19e96541943 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-11-29T05:37:18,803 Skipping link: not a file: https://www.piwheels.org/simple/nmdc-runtime/
2024-11-29T05:37:18,804 Skipping link: not a file: https://pypi.org/simple/nmdc-runtime/
2024-11-29T05:37:18,827 Given no hashes to check 1 links for project 'nmdc-runtime': discarding no candidates
2024-11-29T05:37:18,830 Collecting nmdc-runtime==2.1.1
2024-11-29T05:37:18,833   Created temporary directory: /tmp/pip-unpack-pjaaiacz
2024-11-29T05:37:19,167   Downloading nmdc_runtime-2.1.1.tar.gz (63.8 MB)
2024-11-29T05:37:42,783   Added nmdc-runtime==2.1.1 from https://files.pythonhosted.org/packages/5f/76/3ef1e8c2d4513fbe14bf428d10d4129548c67ddf88f0302e4bd949941077/nmdc_runtime-2.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-0_48mpau'
2024-11-29T05:37:42,787   Running setup.py (path:/tmp/pip-wheel-o4ad8_nw/nmdc-runtime_549ff7ef01cb4c1ebdbff4d6c0c8eda2/setup.py) egg_info for package nmdc-runtime
2024-11-29T05:37:42,789   Created temporary directory: /tmp/pip-pip-egg-info-do369m1t
2024-11-29T05:37:42,790   Preparing metadata (setup.py): started
2024-11-29T05:37:42,792   Running command python setup.py egg_info
2024-11-29T05:37:43,582   /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2024-11-29T05:37:43,582   !!

2024-11-29T05:37:43,583           ********************************************************************************
2024-11-29T05:37:43,583           Requirements should be satisfied by a PEP 517 installer.
2024-11-29T05:37:43,584           If you are using pip, you can try `pip install --use-pep517`.
2024-11-29T05:37:43,584           ********************************************************************************

2024-11-29T05:37:43,585   !!
2024-11-29T05:37:43,586     dist.fetch_build_eggs(dist.setup_requires)
2024-11-29T05:37:51,170   WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
2024-11-29T05:37:51,171   Traceback (most recent call last):
2024-11-29T05:37:51,172     File "/tmp/pip-wheel-o4ad8_nw/nmdc-runtime_549ff7ef01cb4c1ebdbff4d6c0c8eda2/.eggs/setuptools_scm-8.1.0-py3.11.egg/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject
2024-11-29T05:37:51,172       section = defn.get("tool", {})[tool_name]
2024-11-29T05:37:51,173                 ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^
2024-11-29T05:37:51,173   KeyError: 'setuptools_scm'
2024-11-29T05:37:51,284   running egg_info
2024-11-29T05:37:51,315   creating /tmp/pip-pip-egg-info-do369m1t/nmdc_runtime.egg-info
2024-11-29T05:37:51,317   writing /tmp/pip-pip-egg-info-do369m1t/nmdc_runtime.egg-info/PKG-INFO
2024-11-29T05:37:51,320   writing dependency_links to /tmp/pip-pip-egg-info-do369m1t/nmdc_runtime.egg-info/dependency_links.txt
2024-11-29T05:37:51,322   writing entry points to /tmp/pip-pip-egg-info-do369m1t/nmdc_runtime.egg-info/entry_points.txt
2024-11-29T05:37:51,324   writing top-level names to /tmp/pip-pip-egg-info-do369m1t/nmdc_runtime.egg-info/top_level.txt
2024-11-29T05:37:51,326   writing manifest file '/tmp/pip-pip-egg-info-do369m1t/nmdc_runtime.egg-info/SOURCES.txt'
2024-11-29T05:37:51,562   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-11-29T05:37:51,569   reading manifest file '/tmp/pip-pip-egg-info-do369m1t/nmdc_runtime.egg-info/SOURCES.txt'
2024-11-29T05:37:51,571   adding license file 'LICENSE'
2024-11-29T05:37:51,576   writing manifest file '/tmp/pip-pip-egg-info-do369m1t/nmdc_runtime.egg-info/SOURCES.txt'
2024-11-29T05:37:51,693   Preparing metadata (setup.py): finished with status 'done'
2024-11-29T05:37:51,697   Source in /tmp/pip-wheel-o4ad8_nw/nmdc-runtime_549ff7ef01cb4c1ebdbff4d6c0c8eda2 has version 2.1.1, which satisfies requirement nmdc-runtime==2.1.1 from https://files.pythonhosted.org/packages/5f/76/3ef1e8c2d4513fbe14bf428d10d4129548c67ddf88f0302e4bd949941077/nmdc_runtime-2.1.1.tar.gz
2024-11-29T05:37:51,698   Removed nmdc-runtime==2.1.1 from https://files.pythonhosted.org/packages/5f/76/3ef1e8c2d4513fbe14bf428d10d4129548c67ddf88f0302e4bd949941077/nmdc_runtime-2.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-0_48mpau'
2024-11-29T05:37:51,704 Created temporary directory: /tmp/pip-unpack-ucf8pf_g
2024-11-29T05:37:51,705 Created temporary directory: /tmp/pip-unpack-ycjoz5tm
2024-11-29T05:37:51,706 Building wheels for collected packages: nmdc-runtime
2024-11-29T05:37:51,710   Created temporary directory: /tmp/pip-wheel-roc4gpd9
2024-11-29T05:37:51,710   Building wheel for nmdc-runtime (setup.py): started
2024-11-29T05:37:51,711   Destination directory: /tmp/pip-wheel-roc4gpd9
2024-11-29T05:37:51,712   Running command python setup.py bdist_wheel
2024-11-29T05:37:52,436   /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2024-11-29T05:37:52,436   !!

2024-11-29T05:37:52,437           ********************************************************************************
2024-11-29T05:37:52,437           Requirements should be satisfied by a PEP 517 installer.
2024-11-29T05:37:52,438           If you are using pip, you can try `pip install --use-pep517`.
2024-11-29T05:37:52,438           ********************************************************************************

2024-11-29T05:37:52,439   !!
2024-11-29T05:37:52,439     dist.fetch_build_eggs(dist.setup_requires)
2024-11-29T05:37:53,009   WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
2024-11-29T05:37:53,009   Traceback (most recent call last):
2024-11-29T05:37:53,010     File "/tmp/pip-wheel-o4ad8_nw/nmdc-runtime_549ff7ef01cb4c1ebdbff4d6c0c8eda2/.eggs/setuptools_scm-8.1.0-py3.11.egg/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject
2024-11-29T05:37:53,010       section = defn.get("tool", {})[tool_name]
2024-11-29T05:37:53,011                 ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^
2024-11-29T05:37:53,012   KeyError: 'setuptools_scm'
2024-11-29T05:37:53,083   running bdist_wheel
2024-11-29T05:37:53,244   running build
2024-11-29T05:37:53,245   running build_py
2024-11-29T05:37:53,279   creating build/lib/nmdc_runtime
2024-11-29T05:37:53,281   copying nmdc_runtime/config.py -> build/lib/nmdc_runtime
2024-11-29T05:37:53,283   copying nmdc_runtime/main.py -> build/lib/nmdc_runtime
2024-11-29T05:37:53,285   copying nmdc_runtime/containers.py -> build/lib/nmdc_runtime
2024-11-29T05:37:53,287   copying nmdc_runtime/util.py -> build/lib/nmdc_runtime
2024-11-29T05:37:53,289   copying nmdc_runtime/__init__.py -> build/lib/nmdc_runtime
2024-11-29T05:37:53,291   creating build/lib/nmdc_runtime/infrastructure
2024-11-29T05:37:53,292   copying nmdc_runtime/infrastructure/__init__.py -> build/lib/nmdc_runtime/infrastructure
2024-11-29T05:37:53,294   creating build/lib/nmdc_runtime/minter
2024-11-29T05:37:53,296   copying nmdc_runtime/minter/config.py -> build/lib/nmdc_runtime/minter
2024-11-29T05:37:53,298   copying nmdc_runtime/minter/bootstrap.py -> build/lib/nmdc_runtime/minter
2024-11-29T05:37:53,300   copying nmdc_runtime/minter/__init__.py -> build/lib/nmdc_runtime/minter
2024-11-29T05:37:53,302   creating build/lib/nmdc_runtime/client
2024-11-29T05:37:53,303   copying nmdc_runtime/client/__init__.py -> build/lib/nmdc_runtime/client
2024-11-29T05:37:53,305   creating build/lib/nmdc_runtime/site
2024-11-29T05:37:53,306   copying nmdc_runtime/site/ops.py -> build/lib/nmdc_runtime/site
2024-11-29T05:37:53,310   copying nmdc_runtime/site/repository.py -> build/lib/nmdc_runtime/site
2024-11-29T05:37:53,312   copying nmdc_runtime/site/resources.py -> build/lib/nmdc_runtime/site
2024-11-29T05:37:53,315   copying nmdc_runtime/site/graphs.py -> build/lib/nmdc_runtime/site
2024-11-29T05:37:53,318   copying nmdc_runtime/site/util.py -> build/lib/nmdc_runtime/site
2024-11-29T05:37:53,319   copying nmdc_runtime/site/__init__.py -> build/lib/nmdc_runtime/site
2024-11-29T05:37:53,321   creating build/lib/nmdc_runtime/domain
2024-11-29T05:37:53,323   copying nmdc_runtime/domain/__init__.py -> build/lib/nmdc_runtime/domain
2024-11-29T05:37:53,325   creating build/lib/nmdc_runtime/lib
2024-11-29T05:37:53,326   copying nmdc_runtime/lib/extract_nmdc_data.py -> build/lib/nmdc_runtime/lib
2024-11-29T05:37:53,328   copying nmdc_runtime/lib/load_nmdc_data.py -> build/lib/nmdc_runtime/lib
2024-11-29T05:37:53,331   copying nmdc_runtime/lib/nmdc_etl_class.py -> build/lib/nmdc_runtime/lib
2024-11-29T05:37:53,334   copying nmdc_runtime/lib/nmdc_dataframes.py -> build/lib/nmdc_runtime/lib
2024-11-29T05:37:53,338   copying nmdc_runtime/lib/transform_nmdc_data.py -> build/lib/nmdc_runtime/lib
2024-11-29T05:37:53,341   copying nmdc_runtime/lib/__init__.py -> build/lib/nmdc_runtime/lib
2024-11-29T05:37:53,343   creating build/lib/nmdc_runtime/core
2024-11-29T05:37:53,344   copying nmdc_runtime/core/__init__.py -> build/lib/nmdc_runtime/core
2024-11-29T05:37:53,346   creating build/lib/nmdc_runtime/infrastructure/database
2024-11-29T05:37:53,347   copying nmdc_runtime/infrastructure/database/db.py -> build/lib/nmdc_runtime/infrastructure/database
2024-11-29T05:37:53,349   copying nmdc_runtime/infrastructure/database/__init__.py -> build/lib/nmdc_runtime/infrastructure/database
2024-11-29T05:37:53,351   creating build/lib/nmdc_runtime/infrastructure/database/models
2024-11-29T05:37:53,352   copying nmdc_runtime/infrastructure/database/models/user.py -> build/lib/nmdc_runtime/infrastructure/database/models
2024-11-29T05:37:53,354   copying nmdc_runtime/infrastructure/database/models/__init__.py -> build/lib/nmdc_runtime/infrastructure/database/models
2024-11-29T05:37:53,356   creating build/lib/nmdc_runtime/minter/adapters
2024-11-29T05:37:53,357   copying nmdc_runtime/minter/adapters/repository.py -> build/lib/nmdc_runtime/minter/adapters
2024-11-29T05:37:53,359   copying nmdc_runtime/minter/adapters/__init__.py -> build/lib/nmdc_runtime/minter/adapters
2024-11-29T05:37:53,361   creating build/lib/nmdc_runtime/minter/entrypoints
2024-11-29T05:37:53,362   copying nmdc_runtime/minter/entrypoints/fastapi_app.py -> build/lib/nmdc_runtime/minter/entrypoints
2024-11-29T05:37:53,364   copying nmdc_runtime/minter/entrypoints/__init__.py -> build/lib/nmdc_runtime/minter/entrypoints
2024-11-29T05:37:53,367   creating build/lib/nmdc_runtime/minter/domain
2024-11-29T05:37:53,368   copying nmdc_runtime/minter/domain/__init__.py -> build/lib/nmdc_runtime/minter/domain
2024-11-29T05:37:53,369   copying nmdc_runtime/minter/domain/model.py -> build/lib/nmdc_runtime/minter/domain
2024-11-29T05:37:53,372   creating build/lib/nmdc_runtime/site/export
2024-11-29T05:37:53,373   copying nmdc_runtime/site/export/ncbi_xml_utils.py -> build/lib/nmdc_runtime/site/export
2024-11-29T05:37:53,375   copying nmdc_runtime/site/export/ncbi_xml.py -> build/lib/nmdc_runtime/site/export
2024-11-29T05:37:53,378   copying nmdc_runtime/site/export/study_metadata.py -> build/lib/nmdc_runtime/site/export
2024-11-29T05:37:53,380   copying nmdc_runtime/site/export/__init__.py -> build/lib/nmdc_runtime/site/export
2024-11-29T05:37:53,382   creating build/lib/nmdc_runtime/site/changesheets
2024-11-29T05:37:53,383   copying nmdc_runtime/site/changesheets/base.py -> build/lib/nmdc_runtime/site/changesheets
2024-11-29T05:37:53,385   copying nmdc_runtime/site/changesheets/__init__.py -> build/lib/nmdc_runtime/site/changesheets
2024-11-29T05:37:53,387   creating build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,389   copying nmdc_runtime/site/translation/emsl.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,391   copying nmdc_runtime/site/translation/neon_utils.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,393   copying nmdc_runtime/site/translation/neon_benthic_translator.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,395   copying nmdc_runtime/site/translation/jgi.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,397   copying nmdc_runtime/site/translation/gold.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,399   copying nmdc_runtime/site/translation/submission_portal_translator.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,402   copying nmdc_runtime/site/translation/translator.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,404   copying nmdc_runtime/site/translation/gold_translator.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,407   copying nmdc_runtime/site/translation/neon_soil_translator.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,410   copying nmdc_runtime/site/translation/util.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,412   copying nmdc_runtime/site/translation/__init__.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,413   copying nmdc_runtime/site/translation/neon_surface_water_translator.py -> build/lib/nmdc_runtime/site/translation
2024-11-29T05:37:53,416   creating build/lib/nmdc_runtime/site/backup
2024-11-29T05:37:53,417   copying nmdc_runtime/site/backup/nmdcdb_mongodump.py -> build/lib/nmdc_runtime/site/backup
2024-11-29T05:37:53,419   copying nmdc_runtime/site/backup/nmdcdb_mongoimport.py -> build/lib/nmdc_runtime/site/backup
2024-11-29T05:37:53,421   copying nmdc_runtime/site/backup/nmdcdb_mongoexport.py -> build/lib/nmdc_runtime/site/backup
2024-11-29T05:37:53,423   copying nmdc_runtime/site/backup/__init__.py -> build/lib/nmdc_runtime/site/backup
2024-11-29T05:37:53,425   creating build/lib/nmdc_runtime/site/validation
2024-11-29T05:37:53,426   copying nmdc_runtime/site/validation/emsl.py -> build/lib/nmdc_runtime/site/validation
2024-11-29T05:37:53,428   copying nmdc_runtime/site/validation/jgi.py -> build/lib/nmdc_runtime/site/validation
2024-11-29T05:37:53,430   copying nmdc_runtime/site/validation/gold.py -> build/lib/nmdc_runtime/site/validation
2024-11-29T05:37:53,432   copying nmdc_runtime/site/validation/util.py -> build/lib/nmdc_runtime/site/validation
2024-11-29T05:37:53,434   copying nmdc_runtime/site/validation/__init__.py -> build/lib/nmdc_runtime/site/validation
2024-11-29T05:37:53,436   creating build/lib/nmdc_runtime/site/normalization
2024-11-29T05:37:53,438   copying nmdc_runtime/site/normalization/gold.py -> build/lib/nmdc_runtime/site/normalization
2024-11-29T05:37:53,441   copying nmdc_runtime/site/normalization/__init__.py -> build/lib/nmdc_runtime/site/normalization
2024-11-29T05:37:53,443   creating build/lib/nmdc_runtime/site/drsobjects
2024-11-29T05:37:53,444   copying nmdc_runtime/site/drsobjects/ingest.py -> build/lib/nmdc_runtime/site/drsobjects
2024-11-29T05:37:53,446   copying nmdc_runtime/site/drsobjects/__init__.py -> build/lib/nmdc_runtime/site/drsobjects
2024-11-29T05:37:53,448   copying nmdc_runtime/site/drsobjects/registration.py -> build/lib/nmdc_runtime/site/drsobjects
2024-11-29T05:37:53,451   creating build/lib/nmdc_runtime/domain/users
2024-11-29T05:37:53,452   copying nmdc_runtime/domain/users/userService.py -> build/lib/nmdc_runtime/domain/users
2024-11-29T05:37:53,455   copying nmdc_runtime/domain/users/queriesInterface.py -> build/lib/nmdc_runtime/domain/users
2024-11-29T05:37:53,457   copying nmdc_runtime/domain/users/userSchema.py -> build/lib/nmdc_runtime/domain/users
2024-11-29T05:37:53,459   copying nmdc_runtime/domain/users/__init__.py -> build/lib/nmdc_runtime/domain/users
2024-11-29T05:37:53,461   creating build/lib/nmdc_runtime/core/db
2024-11-29T05:37:53,463   copying nmdc_runtime/core/db/Database.py -> build/lib/nmdc_runtime/core/db
2024-11-29T05:37:53,465   copying nmdc_runtime/core/db/__init__.py -> build/lib/nmdc_runtime/core/db
2024-11-29T05:37:53,467   creating build/lib/nmdc_runtime/core/exceptions
2024-11-29T05:37:53,469   copying nmdc_runtime/core/exceptions/token.py -> build/lib/nmdc_runtime/core/exceptions
2024-11-29T05:37:53,471   copying nmdc_runtime/core/exceptions/base.py -> build/lib/nmdc_runtime/core/exceptions
2024-11-29T05:37:53,473   copying nmdc_runtime/core/exceptions/__init__.py -> build/lib/nmdc_runtime/core/exceptions
2024-11-29T05:37:53,525   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-11-29T05:37:53,526   !!

2024-11-29T05:37:53,528           ********************************************************************************
2024-11-29T05:37:53,528           Please avoid running ``setup.py`` directly.
2024-11-29T05:37:53,529           Instead, use pypa/build, pypa/installer or other
2024-11-29T05:37:53,530           standards-based tools.

2024-11-29T05:37:53,531           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-11-29T05:37:53,531           ********************************************************************************

2024-11-29T05:37:53,532   !!
2024-11-29T05:37:53,532     self.initialize_options()
2024-11-29T05:37:53,558   installing to build/bdist.linux-armv7l/wheel
2024-11-29T05:37:53,559   running install
2024-11-29T05:37:53,585   running install_lib
2024-11-29T05:37:53,615   creating build/bdist.linux-armv7l/wheel
2024-11-29T05:37:53,622   creating build/bdist.linux-armv7l/wheel/nmdc_runtime
2024-11-29T05:37:53,627   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure
2024-11-29T05:37:53,629   copying build/lib/nmdc_runtime/infrastructure/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/infrastructure
2024-11-29T05:37:53,632   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure/database
2024-11-29T05:37:53,634   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure/database/models
2024-11-29T05:37:53,636   copying build/lib/nmdc_runtime/infrastructure/database/models/user.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/infrastructure/database/models
2024-11-29T05:37:53,638   copying build/lib/nmdc_runtime/infrastructure/database/models/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/infrastructure/database/models
2024-11-29T05:37:53,639   copying build/lib/nmdc_runtime/infrastructure/database/db.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/infrastructure/database
2024-11-29T05:37:53,641   copying build/lib/nmdc_runtime/infrastructure/database/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/infrastructure/database
2024-11-29T05:37:53,643   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/minter
2024-11-29T05:37:53,645   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/adapters
2024-11-29T05:37:53,647   copying build/lib/nmdc_runtime/minter/adapters/repository.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/minter/adapters
2024-11-29T05:37:53,650   copying build/lib/nmdc_runtime/minter/adapters/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/minter/adapters
2024-11-29T05:37:53,652   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/entrypoints
2024-11-29T05:37:53,654   copying build/lib/nmdc_runtime/minter/entrypoints/fastapi_app.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/minter/entrypoints
2024-11-29T05:37:53,656   copying build/lib/nmdc_runtime/minter/entrypoints/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/minter/entrypoints
2024-11-29T05:37:53,658   copying build/lib/nmdc_runtime/minter/config.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/minter
2024-11-29T05:37:53,660   copying build/lib/nmdc_runtime/minter/bootstrap.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/minter
2024-11-29T05:37:53,662   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/domain
2024-11-29T05:37:53,664   copying build/lib/nmdc_runtime/minter/domain/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/minter/domain
2024-11-29T05:37:53,666   copying build/lib/nmdc_runtime/minter/domain/model.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/minter/domain
2024-11-29T05:37:53,668   copying build/lib/nmdc_runtime/minter/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/minter
2024-11-29T05:37:53,670   copying build/lib/nmdc_runtime/config.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime
2024-11-29T05:37:53,673   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/client
2024-11-29T05:37:53,675   copying build/lib/nmdc_runtime/client/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/client
2024-11-29T05:37:53,678   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site
2024-11-29T05:37:53,680   copying build/lib/nmdc_runtime/site/ops.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site
2024-11-29T05:37:53,683   copying build/lib/nmdc_runtime/site/repository.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site
2024-11-29T05:37:53,686   copying build/lib/nmdc_runtime/site/resources.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site
2024-11-29T05:37:53,689   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/export
2024-11-29T05:37:53,690   copying build/lib/nmdc_runtime/site/export/ncbi_xml_utils.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/export
2024-11-29T05:37:53,692   copying build/lib/nmdc_runtime/site/export/ncbi_xml.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/export
2024-11-29T05:37:53,695   copying build/lib/nmdc_runtime/site/export/study_metadata.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/export
2024-11-29T05:37:53,698   copying build/lib/nmdc_runtime/site/export/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/export
2024-11-29T05:37:53,699   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/changesheets
2024-11-29T05:37:53,700   copying build/lib/nmdc_runtime/site/changesheets/base.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/changesheets
2024-11-29T05:37:53,703   copying build/lib/nmdc_runtime/site/changesheets/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/changesheets
2024-11-29T05:37:53,704   copying build/lib/nmdc_runtime/site/graphs.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site
2024-11-29T05:37:53,707   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-11-29T05:37:53,708   copying build/lib/nmdc_runtime/site/translation/emsl.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,710   copying build/lib/nmdc_runtime/site/translation/neon_utils.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,713   copying build/lib/nmdc_runtime/site/translation/neon_benthic_translator.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,718   copying build/lib/nmdc_runtime/site/translation/jgi.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,721   copying build/lib/nmdc_runtime/site/translation/gold.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,726   copying build/lib/nmdc_runtime/site/translation/submission_portal_translator.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,728   copying build/lib/nmdc_runtime/site/translation/translator.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,730   copying build/lib/nmdc_runtime/site/translation/gold_translator.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,733   copying build/lib/nmdc_runtime/site/translation/neon_soil_translator.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,736   copying build/lib/nmdc_runtime/site/translation/util.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,738   copying build/lib/nmdc_runtime/site/translation/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,740   copying build/lib/nmdc_runtime/site/translation/neon_surface_water_translator.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/translation
2024-11-29T05:37:53,745   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/backup
2024-11-29T05:37:53,746   copying build/lib/nmdc_runtime/site/backup/nmdcdb_mongodump.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/backup
2024-11-29T05:37:53,748   copying build/lib/nmdc_runtime/site/backup/nmdcdb_mongoimport.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/backup
2024-11-29T05:37:53,751   copying build/lib/nmdc_runtime/site/backup/nmdcdb_mongoexport.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/backup
2024-11-29T05:37:53,753   copying build/lib/nmdc_runtime/site/backup/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/backup
2024-11-29T05:37:53,756   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/validation
2024-11-29T05:37:53,758   copying build/lib/nmdc_runtime/site/validation/emsl.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/validation
2024-11-29T05:37:53,760   copying build/lib/nmdc_runtime/site/validation/jgi.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/validation
2024-11-29T05:37:53,762   copying build/lib/nmdc_runtime/site/validation/gold.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/validation
2024-11-29T05:37:53,764   copying build/lib/nmdc_runtime/site/validation/util.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/validation
2024-11-29T05:37:53,766   copying build/lib/nmdc_runtime/site/validation/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/validation
2024-11-29T05:37:53,769   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/normalization
2024-11-29T05:37:53,771   copying build/lib/nmdc_runtime/site/normalization/gold.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/normalization
2024-11-29T05:37:53,773   copying build/lib/nmdc_runtime/site/normalization/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/normalization
2024-11-29T05:37:53,775   copying build/lib/nmdc_runtime/site/util.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site
2024-11-29T05:37:53,777   copying build/lib/nmdc_runtime/site/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site
2024-11-29T05:37:53,779   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/drsobjects
2024-11-29T05:37:53,781   copying build/lib/nmdc_runtime/site/drsobjects/ingest.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/drsobjects
2024-11-29T05:37:53,783   copying build/lib/nmdc_runtime/site/drsobjects/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/drsobjects
2024-11-29T05:37:53,785   copying build/lib/nmdc_runtime/site/drsobjects/registration.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/site/drsobjects
2024-11-29T05:37:53,787   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/domain
2024-11-29T05:37:53,789   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/domain/users
2024-11-29T05:37:53,796   copying build/lib/nmdc_runtime/domain/users/userService.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/domain/users
2024-11-29T05:37:53,798   copying build/lib/nmdc_runtime/domain/users/queriesInterface.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/domain/users
2024-11-29T05:37:53,800   copying build/lib/nmdc_runtime/domain/users/userSchema.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/domain/users
2024-11-29T05:37:53,802   copying build/lib/nmdc_runtime/domain/users/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/domain/users
2024-11-29T05:37:53,804   copying build/lib/nmdc_runtime/domain/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/domain
2024-11-29T05:37:53,806   copying build/lib/nmdc_runtime/main.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime
2024-11-29T05:37:53,808   copying build/lib/nmdc_runtime/containers.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime
2024-11-29T05:37:53,811   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/lib
2024-11-29T05:37:53,812   copying build/lib/nmdc_runtime/lib/extract_nmdc_data.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/lib
2024-11-29T05:37:53,815   copying build/lib/nmdc_runtime/lib/load_nmdc_data.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/lib
2024-11-29T05:37:53,817   copying build/lib/nmdc_runtime/lib/nmdc_etl_class.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/lib
2024-11-29T05:37:53,820   copying build/lib/nmdc_runtime/lib/nmdc_dataframes.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/lib
2024-11-29T05:37:53,823   copying build/lib/nmdc_runtime/lib/transform_nmdc_data.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/lib
2024-11-29T05:37:53,826   copying build/lib/nmdc_runtime/lib/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/lib
2024-11-29T05:37:53,829   copying build/lib/nmdc_runtime/util.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime
2024-11-29T05:37:53,831   copying build/lib/nmdc_runtime/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime
2024-11-29T05:37:53,834   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/core
2024-11-29T05:37:53,836   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/core/db
2024-11-29T05:37:53,837   copying build/lib/nmdc_runtime/core/db/Database.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/core/db
2024-11-29T05:37:53,839   copying build/lib/nmdc_runtime/core/db/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/core/db
2024-11-29T05:37:53,842   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/core/exceptions
2024-11-29T05:37:53,843   copying build/lib/nmdc_runtime/core/exceptions/token.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/core/exceptions
2024-11-29T05:37:53,846   copying build/lib/nmdc_runtime/core/exceptions/base.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/core/exceptions
2024-11-29T05:37:53,847   copying build/lib/nmdc_runtime/core/exceptions/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/core/exceptions
2024-11-29T05:37:53,849   copying build/lib/nmdc_runtime/core/__init__.py -> build/bdist.linux-armv7l/wheel/./nmdc_runtime/core
2024-11-29T05:37:53,850   running install_egg_info
2024-11-29T05:37:53,882   running egg_info
2024-11-29T05:37:53,912   writing nmdc_runtime.egg-info/PKG-INFO
2024-11-29T05:37:53,915   writing dependency_links to nmdc_runtime.egg-info/dependency_links.txt
2024-11-29T05:37:53,916   writing entry points to nmdc_runtime.egg-info/entry_points.txt
2024-11-29T05:37:53,918   writing top-level names to nmdc_runtime.egg-info/top_level.txt
2024-11-29T05:37:54,037   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-11-29T05:37:54,040   reading manifest file 'nmdc_runtime.egg-info/SOURCES.txt'
2024-11-29T05:37:54,120   adding license file 'LICENSE'
2024-11-29T05:37:54,138   writing manifest file 'nmdc_runtime.egg-info/SOURCES.txt'
2024-11-29T05:37:54,140   Copying nmdc_runtime.egg-info to build/bdist.linux-armv7l/wheel/./nmdc_runtime-2.1.1-py3.11.egg-info
2024-11-29T05:37:54,151   running install_scripts
2024-11-29T05:37:54,165   creating build/bdist.linux-armv7l/wheel/nmdc_runtime-2.1.1.dist-info/WHEEL
2024-11-29T05:37:54,167   creating '/tmp/pip-wheel-roc4gpd9/nmdc_runtime-2.1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-11-29T05:37:54,169   adding 'nmdc_runtime/__init__.py'
2024-11-29T05:37:54,170   adding 'nmdc_runtime/config.py'
2024-11-29T05:37:54,172   adding 'nmdc_runtime/containers.py'
2024-11-29T05:37:54,173   adding 'nmdc_runtime/main.py'
2024-11-29T05:37:54,176   adding 'nmdc_runtime/util.py'
2024-11-29T05:37:54,178   adding 'nmdc_runtime/client/__init__.py'
2024-11-29T05:37:54,179   adding 'nmdc_runtime/core/__init__.py'
2024-11-29T05:37:54,181   adding 'nmdc_runtime/core/db/Database.py'
2024-11-29T05:37:54,182   adding 'nmdc_runtime/core/db/__init__.py'
2024-11-29T05:37:54,184   adding 'nmdc_runtime/core/exceptions/__init__.py'
2024-11-29T05:37:54,185   adding 'nmdc_runtime/core/exceptions/base.py'
2024-11-29T05:37:54,186   adding 'nmdc_runtime/core/exceptions/token.py'
2024-11-29T05:37:54,188   adding 'nmdc_runtime/domain/__init__.py'
2024-11-29T05:37:54,189   adding 'nmdc_runtime/domain/users/__init__.py'
2024-11-29T05:37:54,190   adding 'nmdc_runtime/domain/users/queriesInterface.py'
2024-11-29T05:37:54,191   adding 'nmdc_runtime/domain/users/userSchema.py'
2024-11-29T05:37:54,193   adding 'nmdc_runtime/domain/users/userService.py'
2024-11-29T05:37:54,194   adding 'nmdc_runtime/infrastructure/__init__.py'
2024-11-29T05:37:54,196   adding 'nmdc_runtime/infrastructure/database/__init__.py'
2024-11-29T05:37:54,197   adding 'nmdc_runtime/infrastructure/database/db.py'
2024-11-29T05:37:54,198   adding 'nmdc_runtime/infrastructure/database/models/__init__.py'
2024-11-29T05:37:54,200   adding 'nmdc_runtime/infrastructure/database/models/user.py'
2024-11-29T05:37:54,201   adding 'nmdc_runtime/lib/__init__.py'
2024-11-29T05:37:54,202   adding 'nmdc_runtime/lib/extract_nmdc_data.py'
2024-11-29T05:37:54,204   adding 'nmdc_runtime/lib/load_nmdc_data.py'
2024-11-29T05:37:54,207   adding 'nmdc_runtime/lib/nmdc_dataframes.py'
2024-11-29T05:37:54,209   adding 'nmdc_runtime/lib/nmdc_etl_class.py'
2024-11-29T05:37:54,214   adding 'nmdc_runtime/lib/transform_nmdc_data.py'
2024-11-29T05:37:54,216   adding 'nmdc_runtime/minter/__init__.py'
2024-11-29T05:37:54,217   adding 'nmdc_runtime/minter/bootstrap.py'
2024-11-29T05:37:54,218   adding 'nmdc_runtime/minter/config.py'
2024-11-29T05:37:54,220   adding 'nmdc_runtime/minter/adapters/__init__.py'
2024-11-29T05:37:54,221   adding 'nmdc_runtime/minter/adapters/repository.py'
2024-11-29T05:37:54,222   adding 'nmdc_runtime/minter/domain/__init__.py'
2024-11-29T05:37:54,224   adding 'nmdc_runtime/minter/domain/model.py'
2024-11-29T05:37:54,225   adding 'nmdc_runtime/minter/entrypoints/__init__.py'
2024-11-29T05:37:54,226   adding 'nmdc_runtime/minter/entrypoints/fastapi_app.py'
2024-11-29T05:37:54,228   adding 'nmdc_runtime/site/__init__.py'
2024-11-29T05:37:54,229   adding 'nmdc_runtime/site/graphs.py'
2024-11-29T05:37:54,235   adding 'nmdc_runtime/site/ops.py'
2024-11-29T05:37:54,238   adding 'nmdc_runtime/site/repository.py'
2024-11-29T05:37:54,240   adding 'nmdc_runtime/site/resources.py'
2024-11-29T05:37:54,241   adding 'nmdc_runtime/site/util.py'
2024-11-29T05:37:54,243   adding 'nmdc_runtime/site/backup/__init__.py'
2024-11-29T05:37:54,244   adding 'nmdc_runtime/site/backup/nmdcdb_mongodump.py'
2024-11-29T05:37:54,245   adding 'nmdc_runtime/site/backup/nmdcdb_mongoexport.py'
2024-11-29T05:37:54,247   adding 'nmdc_runtime/site/backup/nmdcdb_mongoimport.py'
2024-11-29T05:37:54,248   adding 'nmdc_runtime/site/changesheets/__init__.py'
2024-11-29T05:37:54,250   adding 'nmdc_runtime/site/changesheets/base.py'
2024-11-29T05:37:54,251   adding 'nmdc_runtime/site/drsobjects/__init__.py'
2024-11-29T05:37:54,253   adding 'nmdc_runtime/site/drsobjects/ingest.py'
2024-11-29T05:37:54,254   adding 'nmdc_runtime/site/drsobjects/registration.py'
2024-11-29T05:37:54,256   adding 'nmdc_runtime/site/export/__init__.py'
2024-11-29T05:37:54,258   adding 'nmdc_runtime/site/export/ncbi_xml.py'
2024-11-29T05:37:54,260   adding 'nmdc_runtime/site/export/ncbi_xml_utils.py'
2024-11-29T05:37:54,261   adding 'nmdc_runtime/site/export/study_metadata.py'
2024-11-29T05:37:54,263   adding 'nmdc_runtime/site/normalization/__init__.py'
2024-11-29T05:37:54,264   adding 'nmdc_runtime/site/normalization/gold.py'
2024-11-29T05:37:54,266   adding 'nmdc_runtime/site/translation/__init__.py'
2024-11-29T05:37:54,267   adding 'nmdc_runtime/site/translation/emsl.py'
2024-11-29T05:37:54,268   adding 'nmdc_runtime/site/translation/gold.py'
2024-11-29T05:37:54,272   adding 'nmdc_runtime/site/translation/gold_translator.py'
2024-11-29T05:37:54,273   adding 'nmdc_runtime/site/translation/jgi.py'
2024-11-29T05:37:54,276   adding 'nmdc_runtime/site/translation/neon_benthic_translator.py'
2024-11-29T05:37:54,279   adding 'nmdc_runtime/site/translation/neon_soil_translator.py'
2024-11-29T05:37:54,282   adding 'nmdc_runtime/site/translation/neon_surface_water_translator.py'
2024-11-29T05:37:54,284   adding 'nmdc_runtime/site/translation/neon_utils.py'
2024-11-29T05:37:54,287   adding 'nmdc_runtime/site/translation/submission_portal_translator.py'
2024-11-29T05:37:54,289   adding 'nmdc_runtime/site/translation/translator.py'
2024-11-29T05:37:54,290   adding 'nmdc_runtime/site/translation/util.py'
2024-11-29T05:37:54,292   adding 'nmdc_runtime/site/validation/__init__.py'
2024-11-29T05:37:54,293   adding 'nmdc_runtime/site/validation/emsl.py'
2024-11-29T05:37:54,294   adding 'nmdc_runtime/site/validation/gold.py'
2024-11-29T05:37:54,295   adding 'nmdc_runtime/site/validation/jgi.py'
2024-11-29T05:37:54,297   adding 'nmdc_runtime/site/validation/util.py'
2024-11-29T05:37:54,299   adding 'nmdc_runtime-2.1.1.dist-info/LICENSE'
2024-11-29T05:37:54,300   adding 'nmdc_runtime-2.1.1.dist-info/METADATA'
2024-11-29T05:37:54,301   adding 'nmdc_runtime-2.1.1.dist-info/WHEEL'
2024-11-29T05:37:54,302   adding 'nmdc_runtime-2.1.1.dist-info/entry_points.txt'
2024-11-29T05:37:54,303   adding 'nmdc_runtime-2.1.1.dist-info/top_level.txt'
2024-11-29T05:37:54,305   adding 'nmdc_runtime-2.1.1.dist-info/RECORD'
2024-11-29T05:37:54,308   removing build/bdist.linux-armv7l/wheel
2024-11-29T05:37:54,450   Building wheel for nmdc-runtime (setup.py): finished with status 'done'
2024-11-29T05:37:54,454   Created wheel for nmdc-runtime: filename=nmdc_runtime-2.1.1-py3-none-any.whl size=126164 sha256=2e4c2a6f396f4812bd9d5a6531772b8a154da5547c271044f5c7a7f47debdc72
2024-11-29T05:37:54,455   Stored in directory: /tmp/pip-ephem-wheel-cache-2_akjw9p/wheels/88/1a/3a/20b50ad44f108d9f7b669a660d2a74816e98393af4843976ae
2024-11-29T05:37:54,468 Successfully built nmdc-runtime
2024-11-29T05:37:54,474 Removed build tracker: '/tmp/pip-build-tracker-0_48mpau'