2024-11-29T13:12:26,020 Created temporary directory: /tmp/pip-build-tracker-fajx9bet 2024-11-29T13:12:26,021 Initialized build tracking at /tmp/pip-build-tracker-fajx9bet 2024-11-29T13:12:26,022 Created build tracker: /tmp/pip-build-tracker-fajx9bet 2024-11-29T13:12:26,022 Entered build tracker: /tmp/pip-build-tracker-fajx9bet 2024-11-29T13:12:26,023 Created temporary directory: /tmp/pip-wheel-05al8liu 2024-11-29T13:12:26,027 Created temporary directory: /tmp/pip-ephem-wheel-cache-jdsagwb4 2024-11-29T13:12:26,072 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-11-29T13:12:26,075 2 location(s) to search for versions of read5-ont: 2024-11-29T13:12:26,075 * https://pypi.org/simple/read5-ont/ 2024-11-29T13:12:26,075 * https://www.piwheels.org/simple/read5-ont/ 2024-11-29T13:12:26,076 Fetching project page and analyzing links: https://pypi.org/simple/read5-ont/ 2024-11-29T13:12:26,076 Getting page https://pypi.org/simple/read5-ont/ 2024-11-29T13:12:26,078 Found index url https://pypi.org/simple/ 2024-11-29T13:12:26,298 Fetched page https://pypi.org/simple/read5-ont/ as application/vnd.pypi.simple.v1+json 2024-11-29T13:12:26,302 Skipping link: No binaries permitted for read5-ont: https://files.pythonhosted.org/packages/36/97/f734febe5d94897cc4aec679662123d98451557aebbb8230106cf3037a98/read5_ont-1.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/read5-ont/) (requires-python:>=3.8) 2024-11-29T13:12:26,303 Found link https://files.pythonhosted.org/packages/8e/86/4417b0b9bcf02b9dbf72f4e718ed0316f2613e4a99c36f0ae5052ef3f0d8/read5_ont-1.2.1.tar.gz (from https://pypi.org/simple/read5-ont/) (requires-python:>=3.8), version: 1.2.1 2024-11-29T13:12:26,303 Skipping link: No binaries permitted for read5-ont: https://files.pythonhosted.org/packages/35/df/718be3660eba6b63ff7b023ca3ce64556b094d07672a28c8b65476615792/read5_ont-1.2.2-py2.py3-none-any.whl (from https://pypi.org/simple/read5-ont/) (requires-python:>=3.8) 2024-11-29T13:12:26,304 Found link https://files.pythonhosted.org/packages/e5/5f/9ac8447f0dd645e046edcae632d664d2880105b05dc3ecf2a9bb793c0bf2/read5_ont-1.2.2.tar.gz (from https://pypi.org/simple/read5-ont/) (requires-python:>=3.8), version: 1.2.2 2024-11-29T13:12:26,305 Skipping link: No binaries permitted for read5-ont: https://files.pythonhosted.org/packages/2f/eb/e0439e6fc3947566016c735806aa9f48c5ead8763343447d63e8204d127c/read5_ont-1.2.3-py2.py3-none-any.whl (from https://pypi.org/simple/read5-ont/) (requires-python:>=3.8) 2024-11-29T13:12:26,306 Found link https://files.pythonhosted.org/packages/d0/43/d3cb7c728a27b77e2905ebc577e373732a0e2828229d3dbdae33c7da1ffb/read5_ont-1.2.3.tar.gz (from https://pypi.org/simple/read5-ont/) (requires-python:>=3.8), version: 1.2.3 2024-11-29T13:12:26,306 Skipping link: No binaries permitted for read5-ont: https://files.pythonhosted.org/packages/07/11/3aa46a487d750a718ef9fc4a544ba97819cfdc3b45c90757924c805d4748/read5_ont-1.2.4-py2.py3-none-any.whl (from https://pypi.org/simple/read5-ont/) (requires-python:>=3.8) 2024-11-29T13:12:26,307 Found link https://files.pythonhosted.org/packages/dc/b9/6b095a76d1aae1e120082e239b5a225e7ef101ce287b30f24bedafcee51c/read5_ont-1.2.4.tar.gz (from https://pypi.org/simple/read5-ont/) (requires-python:>=3.8), version: 1.2.4 2024-11-29T13:12:26,308 Skipping link: No binaries permitted for read5-ont: https://files.pythonhosted.org/packages/f0/02/6247a657c26e7e565f2118352011a8c45d409d732bd9c339b00822306ced/read5_ont-1.2.5-py2.py3-none-any.whl (from https://pypi.org/simple/read5-ont/) (requires-python:>=3.8) 2024-11-29T13:12:26,309 Found link https://files.pythonhosted.org/packages/55/13/2702a1079e0af72ebb52fcc08645803178b7c49f92b89128e670435f993e/read5_ont-1.2.5.tar.gz (from https://pypi.org/simple/read5-ont/) (requires-python:>=3.8), version: 1.2.5 2024-11-29T13:12:26,310 Fetching project page and analyzing links: https://www.piwheels.org/simple/read5-ont/ 2024-11-29T13:12:26,310 Getting page https://www.piwheels.org/simple/read5-ont/ 2024-11-29T13:12:26,312 Found index url https://www.piwheels.org/simple/ 2024-11-29T13:12:26,472 Fetched page https://www.piwheels.org/simple/read5-ont/ as text/html 2024-11-29T13:12:26,475 Skipping link: No binaries permitted for read5-ont: https://www.piwheels.org/simple/read5-ont/read5_ont-1.2.4-py2.py3-none-any.whl#sha256=ea018b27985d94723298418a10bbaf0693e1abc9912147e629885067a2040658 (from https://www.piwheels.org/simple/read5-ont/) (requires-python:>=3.8) 2024-11-29T13:12:26,476 Skipping link: No binaries permitted for read5-ont: https://www.piwheels.org/simple/read5-ont/read5_ont-1.2.3-py2.py3-none-any.whl#sha256=d082ac9517471d231dd01fc9d41af4ecc26018c1347eac9c50b523865e935058 (from https://www.piwheels.org/simple/read5-ont/) (requires-python:>=3.8) 2024-11-29T13:12:26,476 Skipping link: No binaries permitted for read5-ont: https://www.piwheels.org/simple/read5-ont/read5_ont-1.2.2-py2.py3-none-any.whl#sha256=0f124c521abb11e715f5f7973e94e7b3ad56581d7f5798596774abd88c467369 (from https://www.piwheels.org/simple/read5-ont/) (requires-python:>=3.8) 2024-11-29T13:12:26,477 Skipping link: No binaries permitted for read5-ont: https://www.piwheels.org/simple/read5-ont/read5_ont-1.2.1-py2.py3-none-any.whl#sha256=e47e8b988d60f741dc7a7678e6090e55bb9200f93a767ce4feb8fc3e76190522 (from https://www.piwheels.org/simple/read5-ont/) (requires-python:>=3.8) 2024-11-29T13:12:26,477 Skipping link: not a file: https://www.piwheels.org/simple/read5-ont/ 2024-11-29T13:12:26,478 Skipping link: not a file: https://pypi.org/simple/read5-ont/ 2024-11-29T13:12:26,497 Given no hashes to check 1 links for project 'read5-ont': discarding no candidates 2024-11-29T13:12:26,499 Collecting read5-ont==1.2.5 2024-11-29T13:12:26,502 Created temporary directory: /tmp/pip-unpack-o0ofa6ai 2024-11-29T13:12:26,642 Downloading read5_ont-1.2.5.tar.gz (703 kB) 2024-11-29T13:12:26,827 Added read5-ont==1.2.5 from https://files.pythonhosted.org/packages/55/13/2702a1079e0af72ebb52fcc08645803178b7c49f92b89128e670435f993e/read5_ont-1.2.5.tar.gz to build tracker '/tmp/pip-build-tracker-fajx9bet' 2024-11-29T13:12:26,829 Running setup.py (path:/tmp/pip-wheel-05al8liu/read5-ont_85e3839c5fd248e1a8ccb72ad32f9649/setup.py) egg_info for package read5-ont 2024-11-29T13:12:26,829 Created temporary directory: /tmp/pip-pip-egg-info-xyivlnt1 2024-11-29T13:12:26,830 Preparing metadata (setup.py): started 2024-11-29T13:12:26,831 Running command python setup.py egg_info 2024-11-29T13:12:27,907 running egg_info 2024-11-29T13:12:27,936 creating /tmp/pip-pip-egg-info-xyivlnt1/read5_ont.egg-info 2024-11-29T13:12:27,937 writing /tmp/pip-pip-egg-info-xyivlnt1/read5_ont.egg-info/PKG-INFO 2024-11-29T13:12:27,940 writing dependency_links to /tmp/pip-pip-egg-info-xyivlnt1/read5_ont.egg-info/dependency_links.txt 2024-11-29T13:12:27,942 writing requirements to /tmp/pip-pip-egg-info-xyivlnt1/read5_ont.egg-info/requires.txt 2024-11-29T13:12:27,943 writing top-level names to /tmp/pip-pip-egg-info-xyivlnt1/read5_ont.egg-info/top_level.txt 2024-11-29T13:12:27,944 writing manifest file '/tmp/pip-pip-egg-info-xyivlnt1/read5_ont.egg-info/SOURCES.txt' 2024-11-29T13:12:28,000 reading manifest file '/tmp/pip-pip-egg-info-xyivlnt1/read5_ont.egg-info/SOURCES.txt' 2024-11-29T13:12:28,002 reading manifest template 'MANIFEST.in' 2024-11-29T13:12:28,003 adding license file 'LICENSE' 2024-11-29T13:12:28,006 writing manifest file '/tmp/pip-pip-egg-info-xyivlnt1/read5_ont.egg-info/SOURCES.txt' 2024-11-29T13:12:28,118 Preparing metadata (setup.py): finished with status 'done' 2024-11-29T13:12:28,122 Source in /tmp/pip-wheel-05al8liu/read5-ont_85e3839c5fd248e1a8ccb72ad32f9649 has version 1.2.5, which satisfies requirement read5-ont==1.2.5 from https://files.pythonhosted.org/packages/55/13/2702a1079e0af72ebb52fcc08645803178b7c49f92b89128e670435f993e/read5_ont-1.2.5.tar.gz 2024-11-29T13:12:28,123 Removed read5-ont==1.2.5 from https://files.pythonhosted.org/packages/55/13/2702a1079e0af72ebb52fcc08645803178b7c49f92b89128e670435f993e/read5_ont-1.2.5.tar.gz from build tracker '/tmp/pip-build-tracker-fajx9bet' 2024-11-29T13:12:28,129 Created temporary directory: /tmp/pip-unpack-u8i5600t 2024-11-29T13:12:28,130 Created temporary directory: /tmp/pip-unpack-z1lojr3o 2024-11-29T13:12:28,131 Building wheels for collected packages: read5-ont 2024-11-29T13:12:28,136 Created temporary directory: /tmp/pip-wheel-vc6oe_kb 2024-11-29T13:12:28,136 Building wheel for read5-ont (setup.py): started 2024-11-29T13:12:28,137 Destination directory: /tmp/pip-wheel-vc6oe_kb 2024-11-29T13:12:28,138 Running command python setup.py bdist_wheel 2024-11-29T13:12:29,189 running bdist_wheel 2024-11-29T13:12:29,243 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:111: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated 2024-11-29T13:12:29,243 !! 2024-11-29T13:12:29,244 ******************************************************************************** 2024-11-29T13:12:29,245 With Python 2.7 end-of-life, support for building universal wheels 2024-11-29T13:12:29,245 (i.e., wheels that support both Python 2 and Python 3) 2024-11-29T13:12:29,246 is being obviated. 2024-11-29T13:12:29,246 Please discontinue using this option, or if you still need it, 2024-11-29T13:12:29,247 file an issue with pypa/setuptools describing your use case. 2024-11-29T13:12:29,248 By 2025-Aug-30, you need to update your project and remove deprecated calls 2024-11-29T13:12:29,248 or your builds will no longer be supported. 2024-11-29T13:12:29,249 ******************************************************************************** 2024-11-29T13:12:29,250 !! 2024-11-29T13:12:29,250 self.finalize_options() 2024-11-29T13:12:29,273 running build 2024-11-29T13:12:29,273 running build_py 2024-11-29T13:12:29,279 creating build/lib/read5_ont 2024-11-29T13:12:29,281 copying read5_ont/AbstractFileReader.py -> build/lib/read5_ont 2024-11-29T13:12:29,284 copying read5_ont/Exceptions.py -> build/lib/read5_ont 2024-11-29T13:12:29,286 copying read5_ont/Fast5Reader.py -> build/lib/read5_ont 2024-11-29T13:12:29,288 copying read5_ont/Reader.py -> build/lib/read5_ont 2024-11-29T13:12:29,290 copying read5_ont/Pod5Reader.py -> build/lib/read5_ont 2024-11-29T13:12:29,293 copying read5_ont/__init__.py -> build/lib/read5_ont 2024-11-29T13:12:29,294 copying read5_ont/_version.py -> build/lib/read5_ont 2024-11-29T13:12:29,297 UPDATING build/lib/read5_ont/_version.py 2024-11-29T13:12:29,298 set build/lib/read5_ont/_version.py to '1.2.5' 2024-11-29T13:12:29,325 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-11-29T13:12:29,326 !! 2024-11-29T13:12:29,327 ******************************************************************************** 2024-11-29T13:12:29,328 Please avoid running ``setup.py`` directly. 2024-11-29T13:12:29,328 Instead, use pypa/build, pypa/installer or other 2024-11-29T13:12:29,329 standards-based tools. 2024-11-29T13:12:29,330 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-11-29T13:12:29,331 ******************************************************************************** 2024-11-29T13:12:29,332 !! 2024-11-29T13:12:29,333 self.initialize_options() 2024-11-29T13:12:29,353 installing to build/bdist.linux-armv7l/wheel 2024-11-29T13:12:29,353 running install 2024-11-29T13:12:29,378 running install_lib 2024-11-29T13:12:29,405 creating build/bdist.linux-armv7l/wheel 2024-11-29T13:12:29,407 creating build/bdist.linux-armv7l/wheel/read5_ont 2024-11-29T13:12:29,408 copying build/lib/read5_ont/AbstractFileReader.py -> build/bdist.linux-armv7l/wheel/./read5_ont 2024-11-29T13:12:29,411 copying build/lib/read5_ont/Exceptions.py -> build/bdist.linux-armv7l/wheel/./read5_ont 2024-11-29T13:12:29,413 copying build/lib/read5_ont/Fast5Reader.py -> build/bdist.linux-armv7l/wheel/./read5_ont 2024-11-29T13:12:29,415 copying build/lib/read5_ont/Reader.py -> build/bdist.linux-armv7l/wheel/./read5_ont 2024-11-29T13:12:29,417 copying build/lib/read5_ont/Pod5Reader.py -> build/bdist.linux-armv7l/wheel/./read5_ont 2024-11-29T13:12:29,419 copying build/lib/read5_ont/__init__.py -> build/bdist.linux-armv7l/wheel/./read5_ont 2024-11-29T13:12:29,421 copying build/lib/read5_ont/_version.py -> build/bdist.linux-armv7l/wheel/./read5_ont 2024-11-29T13:12:29,423 running install_egg_info 2024-11-29T13:12:29,454 running egg_info 2024-11-29T13:12:29,480 writing read5_ont.egg-info/PKG-INFO 2024-11-29T13:12:29,483 writing dependency_links to read5_ont.egg-info/dependency_links.txt 2024-11-29T13:12:29,485 writing requirements to read5_ont.egg-info/requires.txt 2024-11-29T13:12:29,486 writing top-level names to read5_ont.egg-info/top_level.txt 2024-11-29T13:12:29,515 reading manifest file 'read5_ont.egg-info/SOURCES.txt' 2024-11-29T13:12:29,518 reading manifest template 'MANIFEST.in' 2024-11-29T13:12:29,519 adding license file 'LICENSE' 2024-11-29T13:12:29,522 writing manifest file 'read5_ont.egg-info/SOURCES.txt' 2024-11-29T13:12:29,526 Copying read5_ont.egg-info to build/bdist.linux-armv7l/wheel/./read5_ont-1.2.5-py3.11.egg-info 2024-11-29T13:12:29,535 running install_scripts 2024-11-29T13:12:29,549 creating build/bdist.linux-armv7l/wheel/read5_ont-1.2.5.dist-info/WHEEL 2024-11-29T13:12:29,552 creating '/tmp/pip-wheel-vc6oe_kb/read5_ont-1.2.5-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-11-29T13:12:29,555 adding 'read5_ont/AbstractFileReader.py' 2024-11-29T13:12:29,556 adding 'read5_ont/Exceptions.py' 2024-11-29T13:12:29,558 adding 'read5_ont/Fast5Reader.py' 2024-11-29T13:12:29,560 adding 'read5_ont/Pod5Reader.py' 2024-11-29T13:12:29,561 adding 'read5_ont/Reader.py' 2024-11-29T13:12:29,563 adding 'read5_ont/__init__.py' 2024-11-29T13:12:29,564 adding 'read5_ont/_version.py' 2024-11-29T13:12:29,571 adding 'read5_ont-1.2.5.dist-info/LICENSE' 2024-11-29T13:12:29,572 adding 'read5_ont-1.2.5.dist-info/METADATA' 2024-11-29T13:12:29,573 adding 'read5_ont-1.2.5.dist-info/WHEEL' 2024-11-29T13:12:29,574 adding 'read5_ont-1.2.5.dist-info/top_level.txt' 2024-11-29T13:12:29,575 adding 'read5_ont-1.2.5.dist-info/RECORD' 2024-11-29T13:12:29,577 removing build/bdist.linux-armv7l/wheel 2024-11-29T13:12:29,691 Building wheel for read5-ont (setup.py): finished with status 'done' 2024-11-29T13:12:29,694 Created wheel for read5-ont: filename=read5_ont-1.2.5-py2.py3-none-any.whl size=25082 sha256=19e9d7d64e487c448f5a3737b5623483bedcd5077a85252fecd5fb934c7e5f2f 2024-11-29T13:12:29,695 Stored in directory: /tmp/pip-ephem-wheel-cache-jdsagwb4/wheels/46/99/06/6103227ae9636114ff5c39367744e7c46b71d756fdaeada56d 2024-11-29T13:12:29,706 Successfully built read5-ont 2024-11-29T13:12:29,710 Removed build tracker: '/tmp/pip-build-tracker-fajx9bet'