2024-12-13T06:31:02,116 Created temporary directory: /tmp/pip-build-tracker-4i8dcw2m
2024-12-13T06:31:02,118 Initialized build tracking at /tmp/pip-build-tracker-4i8dcw2m
2024-12-13T06:31:02,119 Created build tracker: /tmp/pip-build-tracker-4i8dcw2m
2024-12-13T06:31:02,119 Entered build tracker: /tmp/pip-build-tracker-4i8dcw2m
2024-12-13T06:31:02,121 Created temporary directory: /tmp/pip-wheel-fqigcmp6
2024-12-13T06:31:02,125 Created temporary directory: /tmp/pip-ephem-wheel-cache-y1csex0e
2024-12-13T06:31:02,170 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-12-13T06:31:02,173 2 location(s) to search for versions of plastinet:
2024-12-13T06:31:02,173 * https://pypi.org/simple/plastinet/
2024-12-13T06:31:02,173 * https://www.piwheels.org/simple/plastinet/
2024-12-13T06:31:02,174 Fetching project page and analyzing links: https://pypi.org/simple/plastinet/
2024-12-13T06:31:02,174 Getting page https://pypi.org/simple/plastinet/
2024-12-13T06:31:02,176 Found index url https://pypi.org/simple/
2024-12-13T06:31:02,852 Fetched page https://pypi.org/simple/plastinet/ as application/vnd.pypi.simple.v1+json
2024-12-13T06:31:03,275   Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/8e/0f/4a9539312c872c84dde89fd29fbcdd683cfb4cfe207f73ed878e0ae19b25/plastinet-0.1.4-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10)
2024-12-13T06:31:03,514   Found link https://files.pythonhosted.org/packages/9f/c3/ac1086e18ad17a587c485eba5ffb080e4d626d0f9bcb17b076f45435f5b4/plastinet-0.1.4.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.4
2024-12-13T06:31:03,645   Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/9d/26/1e6b21d7c37c1a2c9a87eb146b2269d072f5883fc3572458215a09f60446/plastinet-0.1.5-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10)
2024-12-13T06:31:03,647   Found link https://files.pythonhosted.org/packages/64/96/04b5e263a64b497458b64cb48c39fe0254e61ab3c2414a1c93cfd4daf8ee/plastinet-0.1.5.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.5
2024-12-13T06:31:03,649   Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/54/e7/cf8f190f505eb2e2a2ad7044464058001a421a5c1d1e8574465a6d71f350/plastinet-0.1.6-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10)
2024-12-13T06:31:03,651   Found link https://files.pythonhosted.org/packages/41/a6/9e3e598ee90a9d228e396f750cb0b0697d055ef78e7626a05a3034a28163/plastinet-0.1.6.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.6
2024-12-13T06:31:03,673   Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/51/36/df3d283a6bf4c0eced6b077c209a808d4a63c25e04c25616deae6bfa36a1/plastinet-0.1.7-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10)
2024-12-13T06:31:03,755   Found link https://files.pythonhosted.org/packages/f9/89/05345a3bd7e1c2f167f7a7e0e0411af69a32952a9efda4e3dcf129443dc9/plastinet-0.1.7.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.7
2024-12-13T06:31:03,843   Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/e9/86/c978ac0f422981c77a1a90e7621194a55a1da87d40ff29832196fcf7c29d/plastinet-0.1.8-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10)
2024-12-13T06:31:03,854   Found link https://files.pythonhosted.org/packages/94/9b/01651fb36f80eaabec8f2e28bc18d8f2c1c4e191933f1d6410fc48d642a0/plastinet-0.1.8.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.8
2024-12-13T06:31:03,874 Fetching project page and analyzing links: https://www.piwheels.org/simple/plastinet/
2024-12-13T06:31:04,115 Getting page https://www.piwheels.org/simple/plastinet/
2024-12-13T06:31:04,137 Found index url https://www.piwheels.org/simple/
2024-12-13T06:31:04,495 Fetched page https://www.piwheels.org/simple/plastinet/ as text/html
2024-12-13T06:31:04,497 Skipping link: not a file: https://www.piwheels.org/simple/plastinet/
2024-12-13T06:31:04,497 Skipping link: not a file: https://pypi.org/simple/plastinet/
2024-12-13T06:31:04,516 Given no hashes to check 1 links for project 'plastinet': discarding no candidates
2024-12-13T06:31:04,518 Collecting plastinet==0.1.4
2024-12-13T06:31:04,521   Created temporary directory: /tmp/pip-unpack-yilfrlsl
2024-12-13T06:31:04,742   Downloading plastinet-0.1.4.tar.gz (15 kB)
2024-12-13T06:31:04,806   Added plastinet==0.1.4 from https://files.pythonhosted.org/packages/9f/c3/ac1086e18ad17a587c485eba5ffb080e4d626d0f9bcb17b076f45435f5b4/plastinet-0.1.4.tar.gz to build tracker '/tmp/pip-build-tracker-4i8dcw2m'
2024-12-13T06:31:04,809   Running setup.py (path:/tmp/pip-wheel-fqigcmp6/plastinet_6e8cd078b8af43fd95d1e8ad57d189d4/setup.py) egg_info for package plastinet
2024-12-13T06:31:04,810   Created temporary directory: /tmp/pip-pip-egg-info-80ouqbmz
2024-12-13T06:31:04,810   Preparing metadata (setup.py): started
2024-12-13T06:31:04,812   Running command python setup.py egg_info
2024-12-13T06:31:05,958   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:337: InformationOnly: Normalizing 'v0.1.4' to '0.1.4'
2024-12-13T06:31:05,958     self.metadata.version = self._normalize_version(self.metadata.version)
2024-12-13T06:31:06,009   running egg_info
2024-12-13T06:31:06,036   creating /tmp/pip-pip-egg-info-80ouqbmz/plastinet.egg-info
2024-12-13T06:31:06,038   writing /tmp/pip-pip-egg-info-80ouqbmz/plastinet.egg-info/PKG-INFO
2024-12-13T06:31:06,041   writing dependency_links to /tmp/pip-pip-egg-info-80ouqbmz/plastinet.egg-info/dependency_links.txt
2024-12-13T06:31:06,042   writing requirements to /tmp/pip-pip-egg-info-80ouqbmz/plastinet.egg-info/requires.txt
2024-12-13T06:31:06,043   writing top-level names to /tmp/pip-pip-egg-info-80ouqbmz/plastinet.egg-info/top_level.txt
2024-12-13T06:31:06,045   writing manifest file '/tmp/pip-pip-egg-info-80ouqbmz/plastinet.egg-info/SOURCES.txt'
2024-12-13T06:31:06,134   reading manifest file '/tmp/pip-pip-egg-info-80ouqbmz/plastinet.egg-info/SOURCES.txt'
2024-12-13T06:31:06,138   writing manifest file '/tmp/pip-pip-egg-info-80ouqbmz/plastinet.egg-info/SOURCES.txt'
2024-12-13T06:31:06,246   Preparing metadata (setup.py): finished with status 'done'
2024-12-13T06:31:06,250   Source in /tmp/pip-wheel-fqigcmp6/plastinet_6e8cd078b8af43fd95d1e8ad57d189d4 has version 0.1.4, which satisfies requirement plastinet==0.1.4 from https://files.pythonhosted.org/packages/9f/c3/ac1086e18ad17a587c485eba5ffb080e4d626d0f9bcb17b076f45435f5b4/plastinet-0.1.4.tar.gz
2024-12-13T06:31:06,251   Removed plastinet==0.1.4 from https://files.pythonhosted.org/packages/9f/c3/ac1086e18ad17a587c485eba5ffb080e4d626d0f9bcb17b076f45435f5b4/plastinet-0.1.4.tar.gz from build tracker '/tmp/pip-build-tracker-4i8dcw2m'
2024-12-13T06:31:06,257 Created temporary directory: /tmp/pip-unpack-5ke0glpj
2024-12-13T06:31:06,258 Created temporary directory: /tmp/pip-unpack-m7ri_goc
2024-12-13T06:31:06,259 Building wheels for collected packages: plastinet
2024-12-13T06:31:06,263   Created temporary directory: /tmp/pip-wheel-dk9kefwm
2024-12-13T06:31:06,264   Building wheel for plastinet (setup.py): started
2024-12-13T06:31:06,265   Destination directory: /tmp/pip-wheel-dk9kefwm
2024-12-13T06:31:06,266   Running command python setup.py bdist_wheel
2024-12-13T06:31:07,510   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:337: InformationOnly: Normalizing 'v0.1.4' to '0.1.4'
2024-12-13T06:31:07,510     self.metadata.version = self._normalize_version(self.metadata.version)
2024-12-13T06:31:07,519   running bdist_wheel
2024-12-13T06:31:07,656   running build
2024-12-13T06:31:07,658   running build_py
2024-12-13T06:31:07,689   creating build/lib/visualization
2024-12-13T06:31:07,692   copying visualization/plots.py -> build/lib/visualization
2024-12-13T06:31:07,695   copying visualization/pseudotime_plots.py -> build/lib/visualization
2024-12-13T06:31:07,697   copying visualization/__init__.py -> build/lib/visualization
2024-12-13T06:31:07,700   creating build/lib/analysis
2024-12-13T06:31:07,701   copying analysis/pseudotime.py -> build/lib/analysis
2024-12-13T06:31:07,704   copying analysis/attention_analysis.py -> build/lib/analysis
2024-12-13T06:31:07,706   copying analysis/spatial_colocalization.py -> build/lib/analysis
2024-12-13T06:31:07,708   copying analysis/expression_analysis.py -> build/lib/analysis
2024-12-13T06:31:07,710   copying analysis/__init__.py -> build/lib/analysis
2024-12-13T06:31:07,712   creating build/lib/data
2024-12-13T06:31:07,713   copying data/graph_utils.py -> build/lib/data
2024-12-13T06:31:07,715   copying data/data_loader.py -> build/lib/data
2024-12-13T06:31:07,717   copying data/__init__.py -> build/lib/data
2024-12-13T06:31:07,719   creating build/lib/models
2024-12-13T06:31:07,720   copying models/plastinet_model.py -> build/lib/models
2024-12-13T06:31:07,723   copying models/__init__.py -> build/lib/models
2024-12-13T06:31:07,725   copying models/attention.py -> build/lib/models
2024-12-13T06:31:07,758   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-12-13T06:31:07,759   !!

2024-12-13T06:31:07,760           ********************************************************************************
2024-12-13T06:31:07,760           Please avoid running ``setup.py`` directly.
2024-12-13T06:31:07,761           Instead, use pypa/build, pypa/installer or other
2024-12-13T06:31:07,761           standards-based tools.

2024-12-13T06:31:07,762           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-12-13T06:31:07,763           ********************************************************************************

2024-12-13T06:31:07,764   !!
2024-12-13T06:31:07,765     self.initialize_options()
2024-12-13T06:31:07,785   installing to build/bdist.linux-armv7l/wheel
2024-12-13T06:31:07,786   running install
2024-12-13T06:31:07,811   running install_lib
2024-12-13T06:31:07,839   creating build/bdist.linux-armv7l/wheel
2024-12-13T06:31:07,841   creating build/bdist.linux-armv7l/wheel/visualization
2024-12-13T06:31:07,844   copying build/lib/visualization/plots.py -> build/bdist.linux-armv7l/wheel/./visualization
2024-12-13T06:31:07,846   copying build/lib/visualization/pseudotime_plots.py -> build/bdist.linux-armv7l/wheel/./visualization
2024-12-13T06:31:07,848   copying build/lib/visualization/__init__.py -> build/bdist.linux-armv7l/wheel/./visualization
2024-12-13T06:31:07,850   creating build/bdist.linux-armv7l/wheel/analysis
2024-12-13T06:31:07,851   copying build/lib/analysis/pseudotime.py -> build/bdist.linux-armv7l/wheel/./analysis
2024-12-13T06:31:07,854   copying build/lib/analysis/attention_analysis.py -> build/bdist.linux-armv7l/wheel/./analysis
2024-12-13T06:31:07,856   copying build/lib/analysis/spatial_colocalization.py -> build/bdist.linux-armv7l/wheel/./analysis
2024-12-13T06:31:07,858   copying build/lib/analysis/expression_analysis.py -> build/bdist.linux-armv7l/wheel/./analysis
2024-12-13T06:31:07,860   copying build/lib/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/./analysis
2024-12-13T06:31:07,862   creating build/bdist.linux-armv7l/wheel/data
2024-12-13T06:31:07,863   copying build/lib/data/graph_utils.py -> build/bdist.linux-armv7l/wheel/./data
2024-12-13T06:31:07,866   copying build/lib/data/data_loader.py -> build/bdist.linux-armv7l/wheel/./data
2024-12-13T06:31:07,868   copying build/lib/data/__init__.py -> build/bdist.linux-armv7l/wheel/./data
2024-12-13T06:31:07,870   creating build/bdist.linux-armv7l/wheel/models
2024-12-13T06:31:07,871   copying build/lib/models/plastinet_model.py -> build/bdist.linux-armv7l/wheel/./models
2024-12-13T06:31:07,874   copying build/lib/models/__init__.py -> build/bdist.linux-armv7l/wheel/./models
2024-12-13T06:31:07,876   copying build/lib/models/attention.py -> build/bdist.linux-armv7l/wheel/./models
2024-12-13T06:31:07,878   running install_egg_info
2024-12-13T06:31:07,916   running egg_info
2024-12-13T06:31:07,944   writing plastinet.egg-info/PKG-INFO
2024-12-13T06:31:07,947   writing dependency_links to plastinet.egg-info/dependency_links.txt
2024-12-13T06:31:07,948   writing requirements to plastinet.egg-info/requires.txt
2024-12-13T06:31:07,949   writing top-level names to plastinet.egg-info/top_level.txt
2024-12-13T06:31:07,981   reading manifest file 'plastinet.egg-info/SOURCES.txt'
2024-12-13T06:31:07,986   writing manifest file 'plastinet.egg-info/SOURCES.txt'
2024-12-13T06:31:07,988   Copying plastinet.egg-info to build/bdist.linux-armv7l/wheel/./plastinet-0.1.4-py3.11.egg-info
2024-12-13T06:31:07,997   running install_scripts
2024-12-13T06:31:08,009   creating build/bdist.linux-armv7l/wheel/plastinet-0.1.4.dist-info/WHEEL
2024-12-13T06:31:08,011   creating '/tmp/pip-wheel-dk9kefwm/plastinet-0.1.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-12-13T06:31:08,014   adding 'analysis/__init__.py'
2024-12-13T06:31:08,015   adding 'analysis/attention_analysis.py'
2024-12-13T06:31:08,017   adding 'analysis/expression_analysis.py'
2024-12-13T06:31:08,018   adding 'analysis/pseudotime.py'
2024-12-13T06:31:08,019   adding 'analysis/spatial_colocalization.py'
2024-12-13T06:31:08,021   adding 'data/__init__.py'
2024-12-13T06:31:08,022   adding 'data/data_loader.py'
2024-12-13T06:31:08,024   adding 'data/graph_utils.py'
2024-12-13T06:31:08,025   adding 'models/__init__.py'
2024-12-13T06:31:08,027   adding 'models/attention.py'
2024-12-13T06:31:08,029   adding 'models/plastinet_model.py'
2024-12-13T06:31:08,031   adding 'visualization/__init__.py'
2024-12-13T06:31:08,032   adding 'visualization/plots.py'
2024-12-13T06:31:08,033   adding 'visualization/pseudotime_plots.py'
2024-12-13T06:31:08,035   adding 'plastinet-0.1.4.dist-info/METADATA'
2024-12-13T06:31:08,036   adding 'plastinet-0.1.4.dist-info/WHEEL'
2024-12-13T06:31:08,037   adding 'plastinet-0.1.4.dist-info/top_level.txt'
2024-12-13T06:31:08,038   adding 'plastinet-0.1.4.dist-info/RECORD'
2024-12-13T06:31:08,039   removing build/bdist.linux-armv7l/wheel
2024-12-13T06:31:08,156   Building wheel for plastinet (setup.py): finished with status 'done'
2024-12-13T06:31:08,158   Created wheel for plastinet: filename=plastinet-0.1.4-py3-none-any.whl size=16248 sha256=5b81339fe948a61ba2647621b96b5f26d534646db32ece7d5a9e0396e35ed0ad
2024-12-13T06:31:08,159   Stored in directory: /tmp/pip-ephem-wheel-cache-y1csex0e/wheels/da/c8/8d/30a4dc2fed39fb8af3eaf7e2da7d91372b3f338662060c2d66
2024-12-13T06:31:08,168 Successfully built plastinet
2024-12-13T06:31:08,172 Removed build tracker: '/tmp/pip-build-tracker-4i8dcw2m'