2024-12-13T06:33:08,421 Created temporary directory: /tmp/pip-build-tracker-d0vqozm4 2024-12-13T06:33:08,422 Initialized build tracking at /tmp/pip-build-tracker-d0vqozm4 2024-12-13T06:33:08,423 Created build tracker: /tmp/pip-build-tracker-d0vqozm4 2024-12-13T06:33:08,423 Entered build tracker: /tmp/pip-build-tracker-d0vqozm4 2024-12-13T06:33:08,424 Created temporary directory: /tmp/pip-wheel-u6cmj1i9 2024-12-13T06:33:08,428 Created temporary directory: /tmp/pip-ephem-wheel-cache-jroyyao2 2024-12-13T06:33:08,472 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-12-13T06:33:08,474 2 location(s) to search for versions of plastinet: 2024-12-13T06:33:08,474 * https://pypi.org/simple/plastinet/ 2024-12-13T06:33:08,474 * https://www.piwheels.org/simple/plastinet/ 2024-12-13T06:33:08,475 Fetching project page and analyzing links: https://pypi.org/simple/plastinet/ 2024-12-13T06:33:08,476 Getting page https://pypi.org/simple/plastinet/ 2024-12-13T06:33:08,477 Found index url https://pypi.org/simple/ 2024-12-13T06:33:08,698 Fetched page https://pypi.org/simple/plastinet/ as application/vnd.pypi.simple.v1+json 2024-12-13T06:33:08,701 Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/8e/0f/4a9539312c872c84dde89fd29fbcdd683cfb4cfe207f73ed878e0ae19b25/plastinet-0.1.4-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:08,702 Found link https://files.pythonhosted.org/packages/9f/c3/ac1086e18ad17a587c485eba5ffb080e4d626d0f9bcb17b076f45435f5b4/plastinet-0.1.4.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.4 2024-12-13T06:33:08,702 Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/9d/26/1e6b21d7c37c1a2c9a87eb146b2269d072f5883fc3572458215a09f60446/plastinet-0.1.5-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:08,703 Found link https://files.pythonhosted.org/packages/64/96/04b5e263a64b497458b64cb48c39fe0254e61ab3c2414a1c93cfd4daf8ee/plastinet-0.1.5.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.5 2024-12-13T06:33:08,704 Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/54/e7/cf8f190f505eb2e2a2ad7044464058001a421a5c1d1e8574465a6d71f350/plastinet-0.1.6-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:08,705 Found link https://files.pythonhosted.org/packages/41/a6/9e3e598ee90a9d228e396f750cb0b0697d055ef78e7626a05a3034a28163/plastinet-0.1.6.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.6 2024-12-13T06:33:08,706 Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/51/36/df3d283a6bf4c0eced6b077c209a808d4a63c25e04c25616deae6bfa36a1/plastinet-0.1.7-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:08,707 Found link https://files.pythonhosted.org/packages/f9/89/05345a3bd7e1c2f167f7a7e0e0411af69a32952a9efda4e3dcf129443dc9/plastinet-0.1.7.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.7 2024-12-13T06:33:08,708 Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/e9/86/c978ac0f422981c77a1a90e7621194a55a1da87d40ff29832196fcf7c29d/plastinet-0.1.8-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:08,709 Found link https://files.pythonhosted.org/packages/94/9b/01651fb36f80eaabec8f2e28bc18d8f2c1c4e191933f1d6410fc48d642a0/plastinet-0.1.8.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.8 2024-12-13T06:33:08,709 Fetching project page and analyzing links: https://www.piwheels.org/simple/plastinet/ 2024-12-13T06:33:08,710 Getting page https://www.piwheels.org/simple/plastinet/ 2024-12-13T06:33:08,711 Found index url https://www.piwheels.org/simple/ 2024-12-13T06:33:08,873 Fetched page https://www.piwheels.org/simple/plastinet/ as text/html 2024-12-13T06:33:08,874 Skipping link: No binaries permitted for plastinet: https://www.piwheels.org/simple/plastinet/plastinet-0.1.4-py3-none-any.whl#sha256=5b81339fe948a61ba2647621b96b5f26d534646db32ece7d5a9e0396e35ed0ad (from https://www.piwheels.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:08,876 Skipping link: not a file: https://www.piwheels.org/simple/plastinet/ 2024-12-13T06:33:08,876 Skipping link: not a file: https://pypi.org/simple/plastinet/ 2024-12-13T06:33:08,896 Given no hashes to check 1 links for project 'plastinet': discarding no candidates 2024-12-13T06:33:08,899 Collecting plastinet==0.1.6 2024-12-13T06:33:08,901 Created temporary directory: /tmp/pip-unpack-sq_h0sj5 2024-12-13T06:33:09,115 Downloading plastinet-0.1.6.tar.gz (15 kB) 2024-12-13T06:33:09,169 Added plastinet==0.1.6 from https://files.pythonhosted.org/packages/41/a6/9e3e598ee90a9d228e396f750cb0b0697d055ef78e7626a05a3034a28163/plastinet-0.1.6.tar.gz to build tracker '/tmp/pip-build-tracker-d0vqozm4' 2024-12-13T06:33:09,174 Running setup.py (path:/tmp/pip-wheel-u6cmj1i9/plastinet_cf7d1b494eda4bde919b919f7fc23da8/setup.py) egg_info for package plastinet 2024-12-13T06:33:09,175 Created temporary directory: /tmp/pip-pip-egg-info-u3f7c96a 2024-12-13T06:33:09,175 Preparing metadata (setup.py): started 2024-12-13T06:33:09,176 Running command python setup.py egg_info 2024-12-13T06:33:10,312 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:337: InformationOnly: Normalizing 'v0.1.6' to '0.1.6' 2024-12-13T06:33:10,312 self.metadata.version = self._normalize_version(self.metadata.version) 2024-12-13T06:33:10,346 running egg_info 2024-12-13T06:33:10,374 creating /tmp/pip-pip-egg-info-u3f7c96a/plastinet.egg-info 2024-12-13T06:33:10,375 writing /tmp/pip-pip-egg-info-u3f7c96a/plastinet.egg-info/PKG-INFO 2024-12-13T06:33:10,378 writing dependency_links to /tmp/pip-pip-egg-info-u3f7c96a/plastinet.egg-info/dependency_links.txt 2024-12-13T06:33:10,380 writing requirements to /tmp/pip-pip-egg-info-u3f7c96a/plastinet.egg-info/requires.txt 2024-12-13T06:33:10,381 writing top-level names to /tmp/pip-pip-egg-info-u3f7c96a/plastinet.egg-info/top_level.txt 2024-12-13T06:33:10,382 writing manifest file '/tmp/pip-pip-egg-info-u3f7c96a/plastinet.egg-info/SOURCES.txt' 2024-12-13T06:33:10,472 reading manifest file '/tmp/pip-pip-egg-info-u3f7c96a/plastinet.egg-info/SOURCES.txt' 2024-12-13T06:33:10,477 writing manifest file '/tmp/pip-pip-egg-info-u3f7c96a/plastinet.egg-info/SOURCES.txt' 2024-12-13T06:33:10,586 Preparing metadata (setup.py): finished with status 'done' 2024-12-13T06:33:10,590 Source in /tmp/pip-wheel-u6cmj1i9/plastinet_cf7d1b494eda4bde919b919f7fc23da8 has version 0.1.6, which satisfies requirement plastinet==0.1.6 from https://files.pythonhosted.org/packages/41/a6/9e3e598ee90a9d228e396f750cb0b0697d055ef78e7626a05a3034a28163/plastinet-0.1.6.tar.gz 2024-12-13T06:33:10,590 Removed plastinet==0.1.6 from https://files.pythonhosted.org/packages/41/a6/9e3e598ee90a9d228e396f750cb0b0697d055ef78e7626a05a3034a28163/plastinet-0.1.6.tar.gz from build tracker '/tmp/pip-build-tracker-d0vqozm4' 2024-12-13T06:33:10,597 Created temporary directory: /tmp/pip-unpack-qdo65205 2024-12-13T06:33:10,598 Created temporary directory: /tmp/pip-unpack-5cb5bty3 2024-12-13T06:33:10,598 Building wheels for collected packages: plastinet 2024-12-13T06:33:10,602 Created temporary directory: /tmp/pip-wheel-1uy0qp73 2024-12-13T06:33:10,603 Building wheel for plastinet (setup.py): started 2024-12-13T06:33:10,604 Destination directory: /tmp/pip-wheel-1uy0qp73 2024-12-13T06:33:10,605 Running command python setup.py bdist_wheel 2024-12-13T06:33:11,646 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:337: InformationOnly: Normalizing 'v0.1.6' to '0.1.6' 2024-12-13T06:33:11,646 self.metadata.version = self._normalize_version(self.metadata.version) 2024-12-13T06:33:11,655 running bdist_wheel 2024-12-13T06:33:11,788 running build 2024-12-13T06:33:11,789 running build_py 2024-12-13T06:33:11,830 creating build/lib/analysis 2024-12-13T06:33:11,832 copying analysis/expression_analysis.py -> build/lib/analysis 2024-12-13T06:33:11,835 copying analysis/spatial_colocalization.py -> build/lib/analysis 2024-12-13T06:33:11,837 copying analysis/attention_analysis.py -> build/lib/analysis 2024-12-13T06:33:11,841 copying analysis/pseudotime.py -> build/lib/analysis 2024-12-13T06:33:11,843 copying analysis/__init__.py -> build/lib/analysis 2024-12-13T06:33:11,846 creating build/lib/plastinet 2024-12-13T06:33:11,847 copying plastinet/__init__.py -> build/lib/plastinet 2024-12-13T06:33:11,849 creating build/lib/plastinet/models 2024-12-13T06:33:11,850 copying plastinet/models/attention.py -> build/lib/plastinet/models 2024-12-13T06:33:11,853 copying plastinet/models/plastinet_model.py -> build/lib/plastinet/models 2024-12-13T06:33:11,855 copying plastinet/models/__init__.py -> build/lib/plastinet/models 2024-12-13T06:33:11,857 creating build/lib/plastinet/visualization 2024-12-13T06:33:11,858 copying plastinet/visualization/pseudotime_plots.py -> build/lib/plastinet/visualization 2024-12-13T06:33:11,860 copying plastinet/visualization/plots.py -> build/lib/plastinet/visualization 2024-12-13T06:33:11,862 copying plastinet/visualization/__init__.py -> build/lib/plastinet/visualization 2024-12-13T06:33:11,864 creating build/lib/plastinet/data 2024-12-13T06:33:11,865 copying plastinet/data/data_loader.py -> build/lib/plastinet/data 2024-12-13T06:33:11,867 copying plastinet/data/__init__.py -> build/lib/plastinet/data 2024-12-13T06:33:11,869 copying plastinet/data/graph_utils.py -> build/lib/plastinet/data 2024-12-13T06:33:11,910 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-12-13T06:33:11,911 !! 2024-12-13T06:33:11,912 ******************************************************************************** 2024-12-13T06:33:11,913 Please avoid running ``setup.py`` directly. 2024-12-13T06:33:11,913 Instead, use pypa/build, pypa/installer or other 2024-12-13T06:33:11,914 standards-based tools. 2024-12-13T06:33:11,915 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-12-13T06:33:11,916 ******************************************************************************** 2024-12-13T06:33:11,917 !! 2024-12-13T06:33:11,918 self.initialize_options() 2024-12-13T06:33:11,943 installing to build/bdist.linux-armv7l/wheel 2024-12-13T06:33:11,943 running install 2024-12-13T06:33:11,971 running install_lib 2024-12-13T06:33:12,009 creating build/bdist.linux-armv7l/wheel 2024-12-13T06:33:12,012 creating build/bdist.linux-armv7l/wheel/analysis 2024-12-13T06:33:12,013 copying build/lib/analysis/expression_analysis.py -> build/bdist.linux-armv7l/wheel/./analysis 2024-12-13T06:33:12,016 copying build/lib/analysis/spatial_colocalization.py -> build/bdist.linux-armv7l/wheel/./analysis 2024-12-13T06:33:12,018 copying build/lib/analysis/attention_analysis.py -> build/bdist.linux-armv7l/wheel/./analysis 2024-12-13T06:33:12,020 copying build/lib/analysis/pseudotime.py -> build/bdist.linux-armv7l/wheel/./analysis 2024-12-13T06:33:12,022 copying build/lib/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/./analysis 2024-12-13T06:33:12,025 creating build/bdist.linux-armv7l/wheel/plastinet 2024-12-13T06:33:12,026 creating build/bdist.linux-armv7l/wheel/plastinet/models 2024-12-13T06:33:12,028 copying build/lib/plastinet/models/attention.py -> build/bdist.linux-armv7l/wheel/./plastinet/models 2024-12-13T06:33:12,030 copying build/lib/plastinet/models/plastinet_model.py -> build/bdist.linux-armv7l/wheel/./plastinet/models 2024-12-13T06:33:12,033 copying build/lib/plastinet/models/__init__.py -> build/bdist.linux-armv7l/wheel/./plastinet/models 2024-12-13T06:33:12,035 creating build/bdist.linux-armv7l/wheel/plastinet/visualization 2024-12-13T06:33:12,036 copying build/lib/plastinet/visualization/pseudotime_plots.py -> build/bdist.linux-armv7l/wheel/./plastinet/visualization 2024-12-13T06:33:12,038 copying build/lib/plastinet/visualization/plots.py -> build/bdist.linux-armv7l/wheel/./plastinet/visualization 2024-12-13T06:33:12,041 copying build/lib/plastinet/visualization/__init__.py -> build/bdist.linux-armv7l/wheel/./plastinet/visualization 2024-12-13T06:33:12,043 creating build/bdist.linux-armv7l/wheel/plastinet/data 2024-12-13T06:33:12,044 copying build/lib/plastinet/data/data_loader.py -> build/bdist.linux-armv7l/wheel/./plastinet/data 2024-12-13T06:33:12,046 copying build/lib/plastinet/data/__init__.py -> build/bdist.linux-armv7l/wheel/./plastinet/data 2024-12-13T06:33:12,048 copying build/lib/plastinet/data/graph_utils.py -> build/bdist.linux-armv7l/wheel/./plastinet/data 2024-12-13T06:33:12,050 copying build/lib/plastinet/__init__.py -> build/bdist.linux-armv7l/wheel/./plastinet 2024-12-13T06:33:12,052 running install_egg_info 2024-12-13T06:33:12,088 running egg_info 2024-12-13T06:33:12,116 writing plastinet.egg-info/PKG-INFO 2024-12-13T06:33:12,118 writing dependency_links to plastinet.egg-info/dependency_links.txt 2024-12-13T06:33:12,120 writing requirements to plastinet.egg-info/requires.txt 2024-12-13T06:33:12,121 writing top-level names to plastinet.egg-info/top_level.txt 2024-12-13T06:33:12,153 reading manifest file 'plastinet.egg-info/SOURCES.txt' 2024-12-13T06:33:12,159 writing manifest file 'plastinet.egg-info/SOURCES.txt' 2024-12-13T06:33:12,160 Copying plastinet.egg-info to build/bdist.linux-armv7l/wheel/./plastinet-0.1.6-py3.11.egg-info 2024-12-13T06:33:12,169 running install_scripts 2024-12-13T06:33:12,180 creating build/bdist.linux-armv7l/wheel/plastinet-0.1.6.dist-info/WHEEL 2024-12-13T06:33:12,182 creating '/tmp/pip-wheel-1uy0qp73/plastinet-0.1.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-12-13T06:33:12,184 adding 'analysis/__init__.py' 2024-12-13T06:33:12,186 adding 'analysis/attention_analysis.py' 2024-12-13T06:33:12,188 adding 'analysis/expression_analysis.py' 2024-12-13T06:33:12,189 adding 'analysis/pseudotime.py' 2024-12-13T06:33:12,190 adding 'analysis/spatial_colocalization.py' 2024-12-13T06:33:12,192 adding 'plastinet/__init__.py' 2024-12-13T06:33:12,194 adding 'plastinet/data/__init__.py' 2024-12-13T06:33:12,195 adding 'plastinet/data/data_loader.py' 2024-12-13T06:33:12,196 adding 'plastinet/data/graph_utils.py' 2024-12-13T06:33:12,198 adding 'plastinet/models/__init__.py' 2024-12-13T06:33:12,199 adding 'plastinet/models/attention.py' 2024-12-13T06:33:12,201 adding 'plastinet/models/plastinet_model.py' 2024-12-13T06:33:12,203 adding 'plastinet/visualization/__init__.py' 2024-12-13T06:33:12,205 adding 'plastinet/visualization/plots.py' 2024-12-13T06:33:12,206 adding 'plastinet/visualization/pseudotime_plots.py' 2024-12-13T06:33:12,208 adding 'plastinet-0.1.6.dist-info/METADATA' 2024-12-13T06:33:12,209 adding 'plastinet-0.1.6.dist-info/WHEEL' 2024-12-13T06:33:12,209 adding 'plastinet-0.1.6.dist-info/top_level.txt' 2024-12-13T06:33:12,210 adding 'plastinet-0.1.6.dist-info/RECORD' 2024-12-13T06:33:12,212 removing build/bdist.linux-armv7l/wheel 2024-12-13T06:33:12,328 Building wheel for plastinet (setup.py): finished with status 'done' 2024-12-13T06:33:12,331 Created wheel for plastinet: filename=plastinet-0.1.6-py3-none-any.whl size=16687 sha256=4d016b6dfd018af3e6072ed08d442252bb6f4eef9c5f2f2631932d01cff66563 2024-12-13T06:33:12,332 Stored in directory: /tmp/pip-ephem-wheel-cache-jroyyao2/wheels/9c/01/eb/49447ec2d36af0b8139f1169c2fd3d28152494fafac2cabbe1 2024-12-13T06:33:12,341 Successfully built plastinet 2024-12-13T06:33:12,344 Removed build tracker: '/tmp/pip-build-tracker-d0vqozm4'