2024-12-13T06:33:36,301 Created temporary directory: /tmp/pip-build-tracker-sz7b6sgi 2024-12-13T06:33:36,302 Initialized build tracking at /tmp/pip-build-tracker-sz7b6sgi 2024-12-13T06:33:36,302 Created build tracker: /tmp/pip-build-tracker-sz7b6sgi 2024-12-13T06:33:36,303 Entered build tracker: /tmp/pip-build-tracker-sz7b6sgi 2024-12-13T06:33:36,304 Created temporary directory: /tmp/pip-wheel-ujlijx3b 2024-12-13T06:33:36,308 Created temporary directory: /tmp/pip-ephem-wheel-cache-nhxovwas 2024-12-13T06:33:36,352 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-12-13T06:33:36,355 2 location(s) to search for versions of plastinet: 2024-12-13T06:33:36,355 * https://pypi.org/simple/plastinet/ 2024-12-13T06:33:36,355 * https://www.piwheels.org/simple/plastinet/ 2024-12-13T06:33:36,356 Fetching project page and analyzing links: https://pypi.org/simple/plastinet/ 2024-12-13T06:33:36,356 Getting page https://pypi.org/simple/plastinet/ 2024-12-13T06:33:36,358 Found index url https://pypi.org/simple/ 2024-12-13T06:33:36,502 Fetched page https://pypi.org/simple/plastinet/ as application/vnd.pypi.simple.v1+json 2024-12-13T06:33:36,505 Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/8e/0f/4a9539312c872c84dde89fd29fbcdd683cfb4cfe207f73ed878e0ae19b25/plastinet-0.1.4-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:36,506 Found link https://files.pythonhosted.org/packages/9f/c3/ac1086e18ad17a587c485eba5ffb080e4d626d0f9bcb17b076f45435f5b4/plastinet-0.1.4.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.4 2024-12-13T06:33:36,507 Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/9d/26/1e6b21d7c37c1a2c9a87eb146b2269d072f5883fc3572458215a09f60446/plastinet-0.1.5-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:36,508 Found link https://files.pythonhosted.org/packages/64/96/04b5e263a64b497458b64cb48c39fe0254e61ab3c2414a1c93cfd4daf8ee/plastinet-0.1.5.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.5 2024-12-13T06:33:36,509 Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/54/e7/cf8f190f505eb2e2a2ad7044464058001a421a5c1d1e8574465a6d71f350/plastinet-0.1.6-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:36,510 Found link https://files.pythonhosted.org/packages/41/a6/9e3e598ee90a9d228e396f750cb0b0697d055ef78e7626a05a3034a28163/plastinet-0.1.6.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.6 2024-12-13T06:33:36,510 Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/51/36/df3d283a6bf4c0eced6b077c209a808d4a63c25e04c25616deae6bfa36a1/plastinet-0.1.7-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:36,511 Found link https://files.pythonhosted.org/packages/f9/89/05345a3bd7e1c2f167f7a7e0e0411af69a32952a9efda4e3dcf129443dc9/plastinet-0.1.7.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.7 2024-12-13T06:33:36,512 Skipping link: No binaries permitted for plastinet: https://files.pythonhosted.org/packages/e9/86/c978ac0f422981c77a1a90e7621194a55a1da87d40ff29832196fcf7c29d/plastinet-0.1.8-py3-none-any.whl (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:36,513 Found link https://files.pythonhosted.org/packages/94/9b/01651fb36f80eaabec8f2e28bc18d8f2c1c4e191933f1d6410fc48d642a0/plastinet-0.1.8.tar.gz (from https://pypi.org/simple/plastinet/) (requires-python:>=3.10), version: 0.1.8 2024-12-13T06:33:36,514 Fetching project page and analyzing links: https://www.piwheels.org/simple/plastinet/ 2024-12-13T06:33:36,515 Getting page https://www.piwheels.org/simple/plastinet/ 2024-12-13T06:33:36,516 Found index url https://www.piwheels.org/simple/ 2024-12-13T06:33:36,679 Fetched page https://www.piwheels.org/simple/plastinet/ as text/html 2024-12-13T06:33:36,681 Skipping link: No binaries permitted for plastinet: https://www.piwheels.org/simple/plastinet/plastinet-0.1.6-py3-none-any.whl#sha256=4d016b6dfd018af3e6072ed08d442252bb6f4eef9c5f2f2631932d01cff66563 (from https://www.piwheels.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:36,682 Skipping link: No binaries permitted for plastinet: https://www.piwheels.org/simple/plastinet/plastinet-0.1.5-py3-none-any.whl#sha256=9e1302fbee80dcd1c218f0097d8bb15e08cb06d06d5baac1611fff269b8d0b41 (from https://www.piwheels.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:36,682 Skipping link: No binaries permitted for plastinet: https://www.piwheels.org/simple/plastinet/plastinet-0.1.4-py3-none-any.whl#sha256=5b81339fe948a61ba2647621b96b5f26d534646db32ece7d5a9e0396e35ed0ad (from https://www.piwheels.org/simple/plastinet/) (requires-python:>=3.10) 2024-12-13T06:33:36,683 Skipping link: not a file: https://www.piwheels.org/simple/plastinet/ 2024-12-13T06:33:36,684 Skipping link: not a file: https://pypi.org/simple/plastinet/ 2024-12-13T06:33:36,701 Given no hashes to check 1 links for project 'plastinet': discarding no candidates 2024-12-13T06:33:36,703 Collecting plastinet==0.1.7 2024-12-13T06:33:36,705 Created temporary directory: /tmp/pip-unpack-907183_p 2024-12-13T06:33:36,921 Downloading plastinet-0.1.7.tar.gz (15 kB) 2024-12-13T06:33:36,979 Added plastinet==0.1.7 from https://files.pythonhosted.org/packages/f9/89/05345a3bd7e1c2f167f7a7e0e0411af69a32952a9efda4e3dcf129443dc9/plastinet-0.1.7.tar.gz to build tracker '/tmp/pip-build-tracker-sz7b6sgi' 2024-12-13T06:33:36,981 Running setup.py (path:/tmp/pip-wheel-ujlijx3b/plastinet_75077eb0b8f845d29a4be016a8ba3aca/setup.py) egg_info for package plastinet 2024-12-13T06:33:36,981 Created temporary directory: /tmp/pip-pip-egg-info-zmom_jmp 2024-12-13T06:33:36,982 Preparing metadata (setup.py): started 2024-12-13T06:33:36,983 Running command python setup.py egg_info 2024-12-13T06:33:38,052 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:337: InformationOnly: Normalizing 'v0.1.7' to '0.1.7' 2024-12-13T06:33:38,052 self.metadata.version = self._normalize_version(self.metadata.version) 2024-12-13T06:33:38,086 running egg_info 2024-12-13T06:33:38,114 creating /tmp/pip-pip-egg-info-zmom_jmp/plastinet.egg-info 2024-12-13T06:33:38,115 writing /tmp/pip-pip-egg-info-zmom_jmp/plastinet.egg-info/PKG-INFO 2024-12-13T06:33:38,118 writing dependency_links to /tmp/pip-pip-egg-info-zmom_jmp/plastinet.egg-info/dependency_links.txt 2024-12-13T06:33:38,120 writing requirements to /tmp/pip-pip-egg-info-zmom_jmp/plastinet.egg-info/requires.txt 2024-12-13T06:33:38,121 writing top-level names to /tmp/pip-pip-egg-info-zmom_jmp/plastinet.egg-info/top_level.txt 2024-12-13T06:33:38,122 writing manifest file '/tmp/pip-pip-egg-info-zmom_jmp/plastinet.egg-info/SOURCES.txt' 2024-12-13T06:33:38,212 reading manifest file '/tmp/pip-pip-egg-info-zmom_jmp/plastinet.egg-info/SOURCES.txt' 2024-12-13T06:33:38,216 writing manifest file '/tmp/pip-pip-egg-info-zmom_jmp/plastinet.egg-info/SOURCES.txt' 2024-12-13T06:33:38,325 Preparing metadata (setup.py): finished with status 'done' 2024-12-13T06:33:38,329 Source in /tmp/pip-wheel-ujlijx3b/plastinet_75077eb0b8f845d29a4be016a8ba3aca has version 0.1.7, which satisfies requirement plastinet==0.1.7 from https://files.pythonhosted.org/packages/f9/89/05345a3bd7e1c2f167f7a7e0e0411af69a32952a9efda4e3dcf129443dc9/plastinet-0.1.7.tar.gz 2024-12-13T06:33:38,330 Removed plastinet==0.1.7 from https://files.pythonhosted.org/packages/f9/89/05345a3bd7e1c2f167f7a7e0e0411af69a32952a9efda4e3dcf129443dc9/plastinet-0.1.7.tar.gz from build tracker '/tmp/pip-build-tracker-sz7b6sgi' 2024-12-13T06:33:38,336 Created temporary directory: /tmp/pip-unpack-3yvy2ys3 2024-12-13T06:33:38,337 Created temporary directory: /tmp/pip-unpack-3_p1rkx5 2024-12-13T06:33:38,338 Building wheels for collected packages: plastinet 2024-12-13T06:33:38,342 Created temporary directory: /tmp/pip-wheel-p_dim7zw 2024-12-13T06:33:38,343 Building wheel for plastinet (setup.py): started 2024-12-13T06:33:38,344 Destination directory: /tmp/pip-wheel-p_dim7zw 2024-12-13T06:33:38,345 Running command python setup.py bdist_wheel 2024-12-13T06:33:39,360 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:337: InformationOnly: Normalizing 'v0.1.7' to '0.1.7' 2024-12-13T06:33:39,360 self.metadata.version = self._normalize_version(self.metadata.version) 2024-12-13T06:33:39,368 running bdist_wheel 2024-12-13T06:33:39,519 running build 2024-12-13T06:33:39,519 running build_py 2024-12-13T06:33:39,550 creating build/lib/plastinet 2024-12-13T06:33:39,552 copying plastinet/__init__.py -> build/lib/plastinet 2024-12-13T06:33:39,554 creating build/lib/analysis 2024-12-13T06:33:39,556 copying analysis/pseudotime.py -> build/lib/analysis 2024-12-13T06:33:39,558 copying analysis/attention_analysis.py -> build/lib/analysis 2024-12-13T06:33:39,561 copying analysis/spatial_colocalization.py -> build/lib/analysis 2024-12-13T06:33:39,562 copying analysis/expression_analysis.py -> build/lib/analysis 2024-12-13T06:33:39,565 copying analysis/__init__.py -> build/lib/analysis 2024-12-13T06:33:39,567 creating build/lib/plastinet/visualization 2024-12-13T06:33:39,568 copying plastinet/visualization/plots.py -> build/lib/plastinet/visualization 2024-12-13T06:33:39,570 copying plastinet/visualization/pseudotime_plots.py -> build/lib/plastinet/visualization 2024-12-13T06:33:39,572 copying plastinet/visualization/__init__.py -> build/lib/plastinet/visualization 2024-12-13T06:33:39,575 creating build/lib/plastinet/data 2024-12-13T06:33:39,576 copying plastinet/data/graph_utils.py -> build/lib/plastinet/data 2024-12-13T06:33:39,578 copying plastinet/data/data_loader.py -> build/lib/plastinet/data 2024-12-13T06:33:39,580 copying plastinet/data/__init__.py -> build/lib/plastinet/data 2024-12-13T06:33:39,583 creating build/lib/plastinet/models 2024-12-13T06:33:39,584 copying plastinet/models/plastinet_model.py -> build/lib/plastinet/models 2024-12-13T06:33:39,587 copying plastinet/models/__init__.py -> build/lib/plastinet/models 2024-12-13T06:33:39,589 copying plastinet/models/attention.py -> build/lib/plastinet/models 2024-12-13T06:33:39,622 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-12-13T06:33:39,623 !! 2024-12-13T06:33:39,624 ******************************************************************************** 2024-12-13T06:33:39,625 Please avoid running ``setup.py`` directly. 2024-12-13T06:33:39,625 Instead, use pypa/build, pypa/installer or other 2024-12-13T06:33:39,626 standards-based tools. 2024-12-13T06:33:39,627 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-12-13T06:33:39,628 ******************************************************************************** 2024-12-13T06:33:39,629 !! 2024-12-13T06:33:39,630 self.initialize_options() 2024-12-13T06:33:39,653 installing to build/bdist.linux-armv7l/wheel 2024-12-13T06:33:39,654 running install 2024-12-13T06:33:39,678 running install_lib 2024-12-13T06:33:39,706 creating build/bdist.linux-armv7l/wheel 2024-12-13T06:33:39,709 creating build/bdist.linux-armv7l/wheel/plastinet 2024-12-13T06:33:39,710 creating build/bdist.linux-armv7l/wheel/plastinet/visualization 2024-12-13T06:33:39,712 copying build/lib/plastinet/visualization/plots.py -> build/bdist.linux-armv7l/wheel/./plastinet/visualization 2024-12-13T06:33:39,715 copying build/lib/plastinet/visualization/pseudotime_plots.py -> build/bdist.linux-armv7l/wheel/./plastinet/visualization 2024-12-13T06:33:39,716 copying build/lib/plastinet/visualization/__init__.py -> build/bdist.linux-armv7l/wheel/./plastinet/visualization 2024-12-13T06:33:39,718 creating build/bdist.linux-armv7l/wheel/plastinet/data 2024-12-13T06:33:39,720 copying build/lib/plastinet/data/graph_utils.py -> build/bdist.linux-armv7l/wheel/./plastinet/data 2024-12-13T06:33:39,722 copying build/lib/plastinet/data/data_loader.py -> build/bdist.linux-armv7l/wheel/./plastinet/data 2024-12-13T06:33:39,724 copying build/lib/plastinet/data/__init__.py -> build/bdist.linux-armv7l/wheel/./plastinet/data 2024-12-13T06:33:39,726 creating build/bdist.linux-armv7l/wheel/plastinet/models 2024-12-13T06:33:39,727 copying build/lib/plastinet/models/plastinet_model.py -> build/bdist.linux-armv7l/wheel/./plastinet/models 2024-12-13T06:33:39,730 copying build/lib/plastinet/models/__init__.py -> build/bdist.linux-armv7l/wheel/./plastinet/models 2024-12-13T06:33:39,732 copying build/lib/plastinet/models/attention.py -> build/bdist.linux-armv7l/wheel/./plastinet/models 2024-12-13T06:33:39,734 copying build/lib/plastinet/__init__.py -> build/bdist.linux-armv7l/wheel/./plastinet 2024-12-13T06:33:39,736 creating build/bdist.linux-armv7l/wheel/analysis 2024-12-13T06:33:39,737 copying build/lib/analysis/pseudotime.py -> build/bdist.linux-armv7l/wheel/./analysis 2024-12-13T06:33:39,739 copying build/lib/analysis/attention_analysis.py -> build/bdist.linux-armv7l/wheel/./analysis 2024-12-13T06:33:39,741 copying build/lib/analysis/spatial_colocalization.py -> build/bdist.linux-armv7l/wheel/./analysis 2024-12-13T06:33:39,743 copying build/lib/analysis/expression_analysis.py -> build/bdist.linux-armv7l/wheel/./analysis 2024-12-13T06:33:39,745 copying build/lib/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/./analysis 2024-12-13T06:33:39,747 running install_egg_info 2024-12-13T06:33:39,783 running egg_info 2024-12-13T06:33:39,810 writing plastinet.egg-info/PKG-INFO 2024-12-13T06:33:39,812 writing dependency_links to plastinet.egg-info/dependency_links.txt 2024-12-13T06:33:39,814 writing requirements to plastinet.egg-info/requires.txt 2024-12-13T06:33:39,815 writing top-level names to plastinet.egg-info/top_level.txt 2024-12-13T06:33:39,847 reading manifest file 'plastinet.egg-info/SOURCES.txt' 2024-12-13T06:33:39,852 writing manifest file 'plastinet.egg-info/SOURCES.txt' 2024-12-13T06:33:39,854 Copying plastinet.egg-info to build/bdist.linux-armv7l/wheel/./plastinet-0.1.7-py3.11.egg-info 2024-12-13T06:33:39,862 running install_scripts 2024-12-13T06:33:39,874 creating build/bdist.linux-armv7l/wheel/plastinet-0.1.7.dist-info/WHEEL 2024-12-13T06:33:39,877 creating '/tmp/pip-wheel-p_dim7zw/plastinet-0.1.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-12-13T06:33:39,879 adding 'analysis/__init__.py' 2024-12-13T06:33:39,880 adding 'analysis/attention_analysis.py' 2024-12-13T06:33:39,882 adding 'analysis/expression_analysis.py' 2024-12-13T06:33:39,883 adding 'analysis/pseudotime.py' 2024-12-13T06:33:39,885 adding 'analysis/spatial_colocalization.py' 2024-12-13T06:33:39,886 adding 'plastinet/__init__.py' 2024-12-13T06:33:39,888 adding 'plastinet/data/__init__.py' 2024-12-13T06:33:39,889 adding 'plastinet/data/data_loader.py' 2024-12-13T06:33:39,891 adding 'plastinet/data/graph_utils.py' 2024-12-13T06:33:39,892 adding 'plastinet/models/__init__.py' 2024-12-13T06:33:39,894 adding 'plastinet/models/attention.py' 2024-12-13T06:33:39,896 adding 'plastinet/models/plastinet_model.py' 2024-12-13T06:33:39,897 adding 'plastinet/visualization/__init__.py' 2024-12-13T06:33:39,899 adding 'plastinet/visualization/plots.py' 2024-12-13T06:33:39,900 adding 'plastinet/visualization/pseudotime_plots.py' 2024-12-13T06:33:39,902 adding 'plastinet-0.1.7.dist-info/METADATA' 2024-12-13T06:33:39,903 adding 'plastinet-0.1.7.dist-info/WHEEL' 2024-12-13T06:33:39,904 adding 'plastinet-0.1.7.dist-info/top_level.txt' 2024-12-13T06:33:39,905 adding 'plastinet-0.1.7.dist-info/RECORD' 2024-12-13T06:33:39,906 removing build/bdist.linux-armv7l/wheel 2024-12-13T06:33:40,023 Building wheel for plastinet (setup.py): finished with status 'done' 2024-12-13T06:33:40,026 Created wheel for plastinet: filename=plastinet-0.1.7-py3-none-any.whl size=16686 sha256=9a84afc38181aa8009fd5ea3221e393d0cd088849f74996fd7f50787e1e5a709 2024-12-13T06:33:40,027 Stored in directory: /tmp/pip-ephem-wheel-cache-nhxovwas/wheels/32/38/4a/2917f9b19e8b0c40d7cc05489e87554c4cfeca6ac74ddb019d 2024-12-13T06:33:40,036 Successfully built plastinet 2024-12-13T06:33:40,040 Removed build tracker: '/tmp/pip-build-tracker-sz7b6sgi'