2024-12-14T15:51:03,522 Created temporary directory: /tmp/pip-build-tracker-fwz1y9nu 2024-12-14T15:51:03,523 Initialized build tracking at /tmp/pip-build-tracker-fwz1y9nu 2024-12-14T15:51:03,524 Created build tracker: /tmp/pip-build-tracker-fwz1y9nu 2024-12-14T15:51:03,524 Entered build tracker: /tmp/pip-build-tracker-fwz1y9nu 2024-12-14T15:51:03,525 Created temporary directory: /tmp/pip-wheel-vu694__u 2024-12-14T15:51:03,529 Created temporary directory: /tmp/pip-ephem-wheel-cache-dov8hlyh 2024-12-14T15:51:03,574 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-12-14T15:51:03,577 2 location(s) to search for versions of polyclonal: 2024-12-14T15:51:03,577 * https://pypi.org/simple/polyclonal/ 2024-12-14T15:51:03,577 * https://www.piwheels.org/simple/polyclonal/ 2024-12-14T15:51:03,577 Fetching project page and analyzing links: https://pypi.org/simple/polyclonal/ 2024-12-14T15:51:03,578 Getting page https://pypi.org/simple/polyclonal/ 2024-12-14T15:51:03,580 Found index url https://pypi.org/simple/ 2024-12-14T15:51:03,802 Fetched page https://pypi.org/simple/polyclonal/ as application/vnd.pypi.simple.v1+json 2024-12-14T15:51:03,807 Found link https://files.pythonhosted.org/packages/b8/4d/379d4e572ea6f4ca964768b776c73926bdbb932ae61800dbf0a6ed5921eb/polyclonal-5.1.tar.gz (from https://pypi.org/simple/polyclonal/), version: 5.1 2024-12-14T15:51:03,807 Found link https://files.pythonhosted.org/packages/0f/d6/48160223fe9b85fc8a73a70aedfe791da3ffd4ea4b8af2348203993e2876/polyclonal-5.2.tar.gz (from https://pypi.org/simple/polyclonal/), version: 5.2 2024-12-14T15:51:03,808 Found link https://files.pythonhosted.org/packages/27/4f/4042b01e9c1472d734c2589e686617dde9fd18d502a363acd2ea7420ee42/polyclonal-5.3.tar.gz (from https://pypi.org/simple/polyclonal/), version: 5.3 2024-12-14T15:51:03,809 Found link https://files.pythonhosted.org/packages/82/59/8551eb1496f071009402020ba9a1005fd36b3f91b8b00dfcf9d0a663155b/polyclonal-6.0.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.0 2024-12-14T15:51:03,809 Found link https://files.pythonhosted.org/packages/3e/c8/c30d0fa3b17a30781507169e3597e60ffdac2152e4306fb01bd343f5a1a9/polyclonal-6.1.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.1 2024-12-14T15:51:03,810 Found link https://files.pythonhosted.org/packages/98/c5/6020c4df01cfaba86f4073a8438fbff598af9bfc92e7cabcb711556a1686/polyclonal-6.2.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.2 2024-12-14T15:51:03,810 Found link https://files.pythonhosted.org/packages/ff/c9/475f7e3ab03ba8781caffe67f4d03d40246b67be9a21753212b0dd842840/polyclonal-6.3.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.3 2024-12-14T15:51:03,811 Found link https://files.pythonhosted.org/packages/02/81/3dec9aab580d16b89b31021cfbd1dfda8bb4bb6e10c11eb1456d213cf2ed/polyclonal-6.4.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.4 2024-12-14T15:51:03,812 Found link https://files.pythonhosted.org/packages/b3/22/53fc8112a8b0e95933cb91642073a561a8fa99d5ee1a4a555286e7dbd4e4/polyclonal-6.5.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.5 2024-12-14T15:51:03,812 Found link https://files.pythonhosted.org/packages/d6/a7/09d007795e91c8148a2dfc849140473cc104f56eff5aa0e33998cbe1feb7/polyclonal-6.6.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.6 2024-12-14T15:51:03,813 Found link https://files.pythonhosted.org/packages/9e/17/2624b16c39a8c6d799b467be09d22d9f8182ca43bc3128858cf12b9a33a8/polyclonal-6.7.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.7 2024-12-14T15:51:03,814 Found link https://files.pythonhosted.org/packages/a5/49/188bc827eaf128e8529d2cce09f2d51218f3490ebc8502346fd7ab381702/polyclonal-6.8.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.8 2024-12-14T15:51:03,814 Found link https://files.pythonhosted.org/packages/58/a0/c4caa35b5b58d730e98b4e492346ec0b5b5cce12ab7b040b42a400655841/polyclonal-6.9.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.9 2024-12-14T15:51:03,815 Found link https://files.pythonhosted.org/packages/e5/52/eeb12abefd579a804e2d501ad65ea8f9c3bf3e6fdb47f4d04baf3d560781/polyclonal-6.10.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.10 2024-12-14T15:51:03,815 Found link https://files.pythonhosted.org/packages/a0/dc/0ce127d855b939a40361c0bc8032829e7b8db7a6cc0d1589e3934cd4a8c9/polyclonal-6.11.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.11 2024-12-14T15:51:03,816 Found link https://files.pythonhosted.org/packages/19/4a/a9a181910e4a130d5e56e6e80e3206facee979d83e78d9da97260460a5fd/polyclonal-6.12.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.12 2024-12-14T15:51:03,817 Found link https://files.pythonhosted.org/packages/88/af/66e62f1f3b6c158198669b7888065944e2d1b1e12941c8657cb45c8d5c62/polyclonal-6.13.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.13 2024-12-14T15:51:03,818 Fetching project page and analyzing links: https://www.piwheels.org/simple/polyclonal/ 2024-12-14T15:51:03,818 Getting page https://www.piwheels.org/simple/polyclonal/ 2024-12-14T15:51:03,819 Found index url https://www.piwheels.org/simple/ 2024-12-14T15:51:03,991 Fetched page https://www.piwheels.org/simple/polyclonal/ as text/html 2024-12-14T15:51:03,996 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.12-py3-none-any.whl#sha256=f2edb13a69d15a06937f79590bc89e2614ec7d6da8c20cd8070679df4fd9a82c (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:03,997 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.11-py3-none-any.whl#sha256=e20ff1752cf8ee1f0fadf4f6c86f1603260e5afbf996ee6be879e3a0b907f959 (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:03,997 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.10-py3-none-any.whl#sha256=9c2799f5db6a4260753cc2033f308661c0a468c6b0f4505b0f2c3538782c0d7e (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:03,998 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.9-py3-none-any.whl#sha256=8f84b5cdb7485467a25d619a921de81cfe06ed074635ced07fe976346d63055a (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:03,999 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.8-py3-none-any.whl#sha256=f8e376b8ccff17234defc1b7401b70b74cad82314c5aa0740eaba37d5e975155 (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:03,999 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.7-py3-none-any.whl#sha256=66829c2e037d64597f631586651fb71b6af7b90324256db0e0bdd67776053fc3 (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,000 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.6-py3-none-any.whl#sha256=47d0486306004125db897dd9aab5c7220d8a99d1cab2757b7b4e600b972b2df7 (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,000 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.5-py3-none-any.whl#sha256=998f94d68281cab1d5c4a497a2ecebc94a19f5d49932a39b10bbbaeb66ae0fbe (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,001 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.4-py3-none-any.whl#sha256=4d956e262f5ea31d4cc00fd42f59008632f4ab688453f8683fa007276456f40c (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,001 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.3-py3-none-any.whl#sha256=57e76d27b7689c6ef1b0dfe98ebc462c65ba853bca5fdc815ffe772f89b556d1 (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,002 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.2-py3-none-any.whl#sha256=36feeea2df70b6a12d7305335755b01221af70764abeb4ed90099221ea09b7a4 (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,002 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.1-py3-none-any.whl#sha256=fdf606c6ad6c275ffa484546632c5b6e7c74c62b473713fae0a783df9da8cb5e (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,003 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.0-py3-none-any.whl#sha256=af49f02801513e1d3ceb18b5d7ca59fa4929211bb40f3890f0f9048887668080 (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,003 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-5.3-py3-none-any.whl#sha256=d89416c1deb1d32a8edc9747586e8e666faa2e07a0f9cb1a006cf72005765cfc (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,004 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-5.2-py3-none-any.whl#sha256=8f986ab85b28baea19c133e1b513e5bd17566413dad734bb65ec84a0f420b026 (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,004 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-5.1-py3-none-any.whl#sha256=5459d4631104517fd905bf897bb96bb7cd9251d6eaa5eedb3636ad01c2f5880e (from https://www.piwheels.org/simple/polyclonal/) 2024-12-14T15:51:04,005 Skipping link: not a file: https://www.piwheels.org/simple/polyclonal/ 2024-12-14T15:51:04,005 Skipping link: not a file: https://pypi.org/simple/polyclonal/ 2024-12-14T15:51:04,026 Given no hashes to check 1 links for project 'polyclonal': discarding no candidates 2024-12-14T15:51:04,028 Collecting polyclonal==6.13 2024-12-14T15:51:04,030 Created temporary directory: /tmp/pip-unpack-w7xy410y 2024-12-14T15:51:04,260 Downloading polyclonal-6.13.tar.gz (57.4 MB) 2024-12-14T15:51:23,999 Added polyclonal==6.13 from https://files.pythonhosted.org/packages/88/af/66e62f1f3b6c158198669b7888065944e2d1b1e12941c8657cb45c8d5c62/polyclonal-6.13.tar.gz to build tracker '/tmp/pip-build-tracker-fwz1y9nu' 2024-12-14T15:51:24,002 Running setup.py (path:/tmp/pip-wheel-vu694__u/polyclonal_7f79aef80dd44847812f1f5ee9d695c5/setup.py) egg_info for package polyclonal 2024-12-14T15:51:24,005 Created temporary directory: /tmp/pip-pip-egg-info-cj_ntmge 2024-12-14T15:51:24,006 Preparing metadata (setup.py): started 2024-12-14T15:51:24,008 Running command python setup.py egg_info 2024-12-14T15:51:27,383 running egg_info 2024-12-14T15:51:27,411 creating /tmp/pip-pip-egg-info-cj_ntmge/polyclonal.egg-info 2024-12-14T15:51:27,413 writing /tmp/pip-pip-egg-info-cj_ntmge/polyclonal.egg-info/PKG-INFO 2024-12-14T15:51:27,417 writing dependency_links to /tmp/pip-pip-egg-info-cj_ntmge/polyclonal.egg-info/dependency_links.txt 2024-12-14T15:51:27,420 writing requirements to /tmp/pip-pip-egg-info-cj_ntmge/polyclonal.egg-info/requires.txt 2024-12-14T15:51:27,421 writing top-level names to /tmp/pip-pip-egg-info-cj_ntmge/polyclonal.egg-info/top_level.txt 2024-12-14T15:51:27,423 writing manifest file '/tmp/pip-pip-egg-info-cj_ntmge/polyclonal.egg-info/SOURCES.txt' 2024-12-14T15:51:27,511 reading manifest file '/tmp/pip-pip-egg-info-cj_ntmge/polyclonal.egg-info/SOURCES.txt' 2024-12-14T15:51:27,513 adding license file 'LICENSE.txt' 2024-12-14T15:51:27,516 writing manifest file '/tmp/pip-pip-egg-info-cj_ntmge/polyclonal.egg-info/SOURCES.txt' 2024-12-14T15:51:27,626 Preparing metadata (setup.py): finished with status 'done' 2024-12-14T15:51:27,630 Source in /tmp/pip-wheel-vu694__u/polyclonal_7f79aef80dd44847812f1f5ee9d695c5 has version 6.13, which satisfies requirement polyclonal==6.13 from https://files.pythonhosted.org/packages/88/af/66e62f1f3b6c158198669b7888065944e2d1b1e12941c8657cb45c8d5c62/polyclonal-6.13.tar.gz 2024-12-14T15:51:27,631 Removed polyclonal==6.13 from https://files.pythonhosted.org/packages/88/af/66e62f1f3b6c158198669b7888065944e2d1b1e12941c8657cb45c8d5c62/polyclonal-6.13.tar.gz from build tracker '/tmp/pip-build-tracker-fwz1y9nu' 2024-12-14T15:51:27,638 Created temporary directory: /tmp/pip-unpack-fdkccnxo 2024-12-14T15:51:27,640 Created temporary directory: /tmp/pip-unpack-xacey_xz 2024-12-14T15:51:27,641 Building wheels for collected packages: polyclonal 2024-12-14T15:51:27,645 Created temporary directory: /tmp/pip-wheel-gqurt90_ 2024-12-14T15:51:27,645 Building wheel for polyclonal (setup.py): started 2024-12-14T15:51:27,647 Destination directory: /tmp/pip-wheel-gqurt90_ 2024-12-14T15:51:27,647 Running command python setup.py bdist_wheel 2024-12-14T15:51:31,848 running bdist_wheel 2024-12-14T15:51:31,982 running build 2024-12-14T15:51:31,982 running build_py 2024-12-14T15:51:32,013 creating build/lib/polyclonal 2024-12-14T15:51:32,015 copying polyclonal/plot.py -> build/lib/polyclonal 2024-12-14T15:51:32,018 copying polyclonal/utils.py -> build/lib/polyclonal 2024-12-14T15:51:32,020 copying polyclonal/pdb_utils.py -> build/lib/polyclonal 2024-12-14T15:51:32,023 copying polyclonal/__init__.py -> build/lib/polyclonal 2024-12-14T15:51:32,025 copying polyclonal/polyclonal_collection.py -> build/lib/polyclonal 2024-12-14T15:51:32,028 copying polyclonal/polyclonal.py -> build/lib/polyclonal 2024-12-14T15:51:32,067 copying polyclonal/alphabets.py -> build/lib/polyclonal 2024-12-14T15:51:32,098 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-12-14T15:51:32,099 !! 2024-12-14T15:51:32,100 ******************************************************************************** 2024-12-14T15:51:32,100 Please avoid running ``setup.py`` directly. 2024-12-14T15:51:32,101 Instead, use pypa/build, pypa/installer or other 2024-12-14T15:51:32,101 standards-based tools. 2024-12-14T15:51:32,102 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-12-14T15:51:32,103 ******************************************************************************** 2024-12-14T15:51:32,104 !! 2024-12-14T15:51:32,105 self.initialize_options() 2024-12-14T15:51:32,126 installing to build/bdist.linux-armv7l/wheel 2024-12-14T15:51:32,127 running install 2024-12-14T15:51:32,151 running install_lib 2024-12-14T15:51:32,184 creating build/bdist.linux-armv7l/wheel 2024-12-14T15:51:32,187 creating build/bdist.linux-armv7l/wheel/polyclonal 2024-12-14T15:51:32,188 copying build/lib/polyclonal/plot.py -> build/bdist.linux-armv7l/wheel/./polyclonal 2024-12-14T15:51:32,191 copying build/lib/polyclonal/utils.py -> build/bdist.linux-armv7l/wheel/./polyclonal 2024-12-14T15:51:32,194 copying build/lib/polyclonal/pdb_utils.py -> build/bdist.linux-armv7l/wheel/./polyclonal 2024-12-14T15:51:32,196 copying build/lib/polyclonal/__init__.py -> build/bdist.linux-armv7l/wheel/./polyclonal 2024-12-14T15:51:32,198 copying build/lib/polyclonal/polyclonal_collection.py -> build/bdist.linux-armv7l/wheel/./polyclonal 2024-12-14T15:51:32,202 copying build/lib/polyclonal/polyclonal.py -> build/bdist.linux-armv7l/wheel/./polyclonal 2024-12-14T15:51:32,206 copying build/lib/polyclonal/alphabets.py -> build/bdist.linux-armv7l/wheel/./polyclonal 2024-12-14T15:51:32,208 running install_egg_info 2024-12-14T15:51:32,241 running egg_info 2024-12-14T15:51:32,269 writing polyclonal.egg-info/PKG-INFO 2024-12-14T15:51:32,272 writing dependency_links to polyclonal.egg-info/dependency_links.txt 2024-12-14T15:51:32,274 writing requirements to polyclonal.egg-info/requires.txt 2024-12-14T15:51:32,275 writing top-level names to polyclonal.egg-info/top_level.txt 2024-12-14T15:51:32,306 reading manifest file 'polyclonal.egg-info/SOURCES.txt' 2024-12-14T15:51:32,325 adding license file 'LICENSE.txt' 2024-12-14T15:51:32,331 writing manifest file 'polyclonal.egg-info/SOURCES.txt' 2024-12-14T15:51:32,333 Copying polyclonal.egg-info to build/bdist.linux-armv7l/wheel/./polyclonal-6.13-py3.11.egg-info 2024-12-14T15:51:32,343 running install_scripts 2024-12-14T15:51:32,359 creating build/bdist.linux-armv7l/wheel/polyclonal-6.13.dist-info/WHEEL 2024-12-14T15:51:32,361 creating '/tmp/pip-wheel-gqurt90_/polyclonal-6.13-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-12-14T15:51:32,364 adding 'polyclonal/__init__.py' 2024-12-14T15:51:32,365 adding 'polyclonal/alphabets.py' 2024-12-14T15:51:32,368 adding 'polyclonal/pdb_utils.py' 2024-12-14T15:51:32,374 adding 'polyclonal/plot.py' 2024-12-14T15:51:32,389 adding 'polyclonal/polyclonal.py' 2024-12-14T15:51:32,396 adding 'polyclonal/polyclonal_collection.py' 2024-12-14T15:51:32,398 adding 'polyclonal/utils.py' 2024-12-14T15:51:32,400 adding 'polyclonal-6.13.dist-info/LICENSE.txt' 2024-12-14T15:51:32,401 adding 'polyclonal-6.13.dist-info/METADATA' 2024-12-14T15:51:32,402 adding 'polyclonal-6.13.dist-info/WHEEL' 2024-12-14T15:51:32,403 adding 'polyclonal-6.13.dist-info/top_level.txt' 2024-12-14T15:51:32,404 adding 'polyclonal-6.13.dist-info/RECORD' 2024-12-14T15:51:32,405 removing build/bdist.linux-armv7l/wheel 2024-12-14T15:51:32,755 Building wheel for polyclonal (setup.py): finished with status 'done' 2024-12-14T15:51:32,896 Created wheel for polyclonal: filename=polyclonal-6.13-py3-none-any.whl size=66370 sha256=ab2c32fdae6af496683e5225e27ca6687f259b365ab13d1f07f8a4ab86b4c958 2024-12-14T15:51:32,898 Stored in directory: /tmp/pip-ephem-wheel-cache-dov8hlyh/wheels/87/76/b6/1566c829c4e63d42ea0332a97fc4ad149366a00e66b1938aed 2024-12-14T15:51:32,909 Successfully built polyclonal 2024-12-14T15:51:32,915 Removed build tracker: '/tmp/pip-build-tracker-fwz1y9nu'