2024-12-28T23:13:17,088 Created temporary directory: /tmp/pip-build-tracker-el5zlx4m 2024-12-28T23:13:17,089 Initialized build tracking at /tmp/pip-build-tracker-el5zlx4m 2024-12-28T23:13:17,090 Created build tracker: /tmp/pip-build-tracker-el5zlx4m 2024-12-28T23:13:17,090 Entered build tracker: /tmp/pip-build-tracker-el5zlx4m 2024-12-28T23:13:17,091 Created temporary directory: /tmp/pip-wheel-zurelhm9 2024-12-28T23:13:17,095 Created temporary directory: /tmp/pip-ephem-wheel-cache-miuo23zc 2024-12-28T23:13:17,137 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-12-28T23:13:17,140 2 location(s) to search for versions of protenix: 2024-12-28T23:13:17,140 * https://pypi.org/simple/protenix/ 2024-12-28T23:13:17,140 * https://www.piwheels.org/simple/protenix/ 2024-12-28T23:13:17,141 Fetching project page and analyzing links: https://pypi.org/simple/protenix/ 2024-12-28T23:13:17,142 Getting page https://pypi.org/simple/protenix/ 2024-12-28T23:13:17,143 Found index url https://pypi.org/simple/ 2024-12-28T23:13:17,291 Fetched page https://pypi.org/simple/protenix/ as application/vnd.pypi.simple.v1+json 2024-12-28T23:13:17,296 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/a8/ea/bbe375d1a89b5e3cbe5e07e56184e29a7b779f964a8ea910337a0746af5e/Protenix-0.0.1-py3-none-any.whl (from https://pypi.org/simple/protenix/) 2024-12-28T23:13:17,297 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/35/f6/105b3517490c13d23880689ef3b4477d072d117ca4cc6f805bad9ee16391/protenix-0.0.1-py3-none-any.whl (from https://pypi.org/simple/protenix/) 2024-12-28T23:13:17,298 Found link https://files.pythonhosted.org/packages/63/d5/22a2098752b2b8c95f2ced18d38918883aa9a5ac8cee9df5174aadfee19c/protenix-0.0.1.tar.gz (from https://pypi.org/simple/protenix/), version: 0.0.1 2024-12-28T23:13:17,298 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/85/33/10bb83edcf222b7cd05cc94d453ac7edfa86f09c7100db8c62fcc894745c/protenix-0.1.0-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,299 Found link https://files.pythonhosted.org/packages/d5/61/cdea4397a181ca2b108c6df0aa4c30e7a6fc34c5b75ad69557569c44b61d/protenix-0.1.0.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:>=3.10), version: 0.1.0 2024-12-28T23:13:17,300 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/28/00/2206a6a3a02d45eeb6e16c6ffcacff6789f11489238acd07ad5127219741/protenix-0.1.1-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,301 Found link https://files.pythonhosted.org/packages/2b/7b/20fe2818e890f5d25a892ba31a24b910d0cf34e9f86b990c042c3f91fd05/protenix-0.1.1.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:>=3.10), version: 0.1.1 2024-12-28T23:13:17,301 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/f5/3f/993181bd5478dccf62a5265df701cc9762d257ac04ea6aec26f2e0ec6b0e/protenix-0.1.2-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:<3.12,>=3.10) 2024-12-28T23:13:17,302 Found link https://files.pythonhosted.org/packages/18/ff/8a30b1df6d1bc731a8b4075a077421e306d85976cae82e758a5f15cef4fd/protenix-0.1.2.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:<3.12,>=3.10), version: 0.1.2 2024-12-28T23:13:17,303 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/c3/31/3b2b20aafa4471bcda6389257ad5348c7762374fe725b0552f836dc13ef6/protenix-0.1.3-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,304 Found link https://files.pythonhosted.org/packages/2c/1c/0788760bb4cd6bae9edc74ef1341e9cc74ad6190b8b5dbd972a361184b97/protenix-0.1.3.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:>=3.10), version: 0.1.3 2024-12-28T23:13:17,305 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/09/b7/15a72afe3d229492604e5ca7ebed72cd1402068f2d5518e26ebef3f2bb5c/protenix-0.2.0-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,305 Found link https://files.pythonhosted.org/packages/0f/17/fdc141be77d735ddf3bfba80a660873fa13732b6c77847434b969aa66f51/protenix-0.2.0.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:>=3.10), version: 0.2.0 2024-12-28T23:13:17,306 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/99/56/de0a35a125cc0247a366608c8598bdd949ba6068c02fb8d13e8147f65d9c/protenix-0.3.0-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,307 Found link https://files.pythonhosted.org/packages/b6/96/8d6d036dcaff9c1884fcbaa2c752fed65e24320fab2a0a8b128a615da89d/protenix-0.3.0.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:>=3.10), version: 0.3.0 2024-12-28T23:13:17,308 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/bf/6b/1cb9d8eea4be4973f97bd1f138f6da0711fad309b76b5c977b316c6bc511/protenix-0.3.1-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,309 Found link https://files.pythonhosted.org/packages/9a/85/b1ec219c8b8a3ba735742164561a917f53e81f11d2a3a9544a206f9ac21b/protenix-0.3.1.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:>=3.10), version: 0.3.1 2024-12-28T23:13:17,309 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/6d/11/4c2946b935b56d995c7418cfc783c16e9e647de72a34380c42e573d4b28d/protenix-0.3.2-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,310 Found link https://files.pythonhosted.org/packages/65/48/25fdef4629cd5ce68c65f733fc49388378cacd3658cd76b5e88893ca5227/protenix-0.3.2.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:>=3.10), version: 0.3.2 2024-12-28T23:13:17,311 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/c7/93/f19c14b2b49405f326fab9594ffd7252ef0e231cc348d61b5e406408c8cf/protenix-0.3.3-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,312 Found link https://files.pythonhosted.org/packages/83/67/8697c13e89ed881756f1d188346b4e241decea92545f611778baa9273a49/protenix-0.3.3.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:>=3.10), version: 0.3.3 2024-12-28T23:13:17,313 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/49/29/b5b7a2e6e0802ba1d6256d774aafcce43d86773202697a4d1ebb7ff3a95a/protenix-0.3.4-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,313 Found link https://files.pythonhosted.org/packages/67/bf/6ccce5f88c48f27559d138e5b4e65170e318a0d97c803c655ba3734f9efd/protenix-0.3.4.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:>=3.10), version: 0.3.4 2024-12-28T23:13:17,314 Skipping link: No binaries permitted for protenix: https://files.pythonhosted.org/packages/22/4e/6387baad87ace43b71024601db621c8adb12645ee898bfdf653ffe0067d5/protenix-0.3.5-py3-none-any.whl (from https://pypi.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,315 Found link https://files.pythonhosted.org/packages/8e/75/ba5a8e3b5e13eab23909185b11b044e4e3db04ade55485e9d7fe09b6e95e/protenix-0.3.5.tar.gz (from https://pypi.org/simple/protenix/) (requires-python:>=3.10), version: 0.3.5 2024-12-28T23:13:17,316 Fetching project page and analyzing links: https://www.piwheels.org/simple/protenix/ 2024-12-28T23:13:17,317 Getting page https://www.piwheels.org/simple/protenix/ 2024-12-28T23:13:17,318 Found index url https://www.piwheels.org/simple/ 2024-12-28T23:13:17,481 Fetched page https://www.piwheels.org/simple/protenix/ as text/html 2024-12-28T23:13:17,485 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/protenix-0.3.4-py3-none-any.whl#sha256=d375e6e6506082ba1ef1e01d816c701e9287af557cb0852c45aea426702f052f (from https://www.piwheels.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,486 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/protenix-0.3.3-py3-none-any.whl#sha256=bce00ef75c8d8f408dca3bd0105c8bc555da5e34c8998748544be1bb5f763c02 (from https://www.piwheels.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,487 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/protenix-0.3.2-py3-none-any.whl#sha256=0255f130567cda78b0dd7e9e1efee966d489a4302df91f47c2ce7d7c5f9b3400 (from https://www.piwheels.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,487 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/protenix-0.3.1-py3-none-any.whl#sha256=624b9eaf9450baa3748fbe7d038a393ab59d36d7b191a70d676d592c81f46d1f (from https://www.piwheels.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,488 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/protenix-0.3.0-py3-none-any.whl#sha256=c2af82dfdebc9606f320eb2d0ae308e644cd77922b443dcd59e7f778e756ac45 (from https://www.piwheels.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,488 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/protenix-0.2.0-py3-none-any.whl#sha256=0de87030b4ba1d9e3c2b67265493001f00eca096d862816f65f818b739c96c6f (from https://www.piwheels.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,489 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/protenix-0.1.3-py3-none-any.whl#sha256=be21c60c572799c5562933a71a3087ae1441533805771913e77578fc6280e314 (from https://www.piwheels.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,489 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/protenix-0.1.2-py3-none-any.whl#sha256=10909020be81638dbfe8da0ff0bc107ad732dc3dc8e420d09aa3e346c53ac527 (from https://www.piwheels.org/simple/protenix/) (requires-python:>=3.10,<3.12) 2024-12-28T23:13:17,490 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/protenix-0.1.1-py3-none-any.whl#sha256=aa7a8c0ad8f38f5430cb145bb56675e2b0deb861589bbb05ec6eb09dd95c5f57 (from https://www.piwheels.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,490 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/protenix-0.1.0-py3-none-any.whl#sha256=95dd14c125ff66c76135ed8525ede80d6be803880749ec813036bb317ca23e6e (from https://www.piwheels.org/simple/protenix/) (requires-python:>=3.10) 2024-12-28T23:13:17,491 Skipping link: No binaries permitted for protenix: https://www.piwheels.org/simple/protenix/Protenix-0.0.1-py3-none-any.whl#sha256=5b251c54ef00f26ee302a294be031208ca73350e41e88d05368f4146cdb01794 (from https://www.piwheels.org/simple/protenix/) 2024-12-28T23:13:17,492 Skipping link: not a file: https://www.piwheels.org/simple/protenix/ 2024-12-28T23:13:17,492 Skipping link: not a file: https://pypi.org/simple/protenix/ 2024-12-28T23:13:17,512 Given no hashes to check 1 links for project 'protenix': discarding no candidates 2024-12-28T23:13:17,514 Collecting protenix==0.3.5 2024-12-28T23:13:17,516 Created temporary directory: /tmp/pip-unpack-ilem7n8k 2024-12-28T23:13:17,660 Downloading protenix-0.3.5.tar.gz (309 kB) 2024-12-28T23:13:18,055 Added protenix==0.3.5 from https://files.pythonhosted.org/packages/8e/75/ba5a8e3b5e13eab23909185b11b044e4e3db04ade55485e9d7fe09b6e95e/protenix-0.3.5.tar.gz to build tracker '/tmp/pip-build-tracker-el5zlx4m' 2024-12-28T23:13:18,058 Running setup.py (path:/tmp/pip-wheel-zurelhm9/protenix_c08f2f603a63418a889b8970111275d0/setup.py) egg_info for package protenix 2024-12-28T23:13:18,058 Created temporary directory: /tmp/pip-pip-egg-info-oyrrgkk7 2024-12-28T23:13:18,059 Preparing metadata (setup.py): started 2024-12-28T23:13:18,060 Running command python setup.py egg_info 2024-12-28T23:13:19,186 running egg_info 2024-12-28T23:13:19,214 creating /tmp/pip-pip-egg-info-oyrrgkk7/protenix.egg-info 2024-12-28T23:13:19,215 writing /tmp/pip-pip-egg-info-oyrrgkk7/protenix.egg-info/PKG-INFO 2024-12-28T23:13:19,218 writing dependency_links to /tmp/pip-pip-egg-info-oyrrgkk7/protenix.egg-info/dependency_links.txt 2024-12-28T23:13:19,220 writing entry points to /tmp/pip-pip-egg-info-oyrrgkk7/protenix.egg-info/entry_points.txt 2024-12-28T23:13:19,221 writing requirements to /tmp/pip-pip-egg-info-oyrrgkk7/protenix.egg-info/requires.txt 2024-12-28T23:13:19,222 writing top-level names to /tmp/pip-pip-egg-info-oyrrgkk7/protenix.egg-info/top_level.txt 2024-12-28T23:13:19,224 writing manifest file '/tmp/pip-pip-egg-info-oyrrgkk7/protenix.egg-info/SOURCES.txt' 2024-12-28T23:13:19,332 reading manifest file '/tmp/pip-pip-egg-info-oyrrgkk7/protenix.egg-info/SOURCES.txt' 2024-12-28T23:13:19,333 adding license file 'LICENSE' 2024-12-28T23:13:19,339 writing manifest file '/tmp/pip-pip-egg-info-oyrrgkk7/protenix.egg-info/SOURCES.txt' 2024-12-28T23:13:19,449 Preparing metadata (setup.py): finished with status 'done' 2024-12-28T23:13:19,454 Source in /tmp/pip-wheel-zurelhm9/protenix_c08f2f603a63418a889b8970111275d0 has version 0.3.5, which satisfies requirement protenix==0.3.5 from https://files.pythonhosted.org/packages/8e/75/ba5a8e3b5e13eab23909185b11b044e4e3db04ade55485e9d7fe09b6e95e/protenix-0.3.5.tar.gz 2024-12-28T23:13:19,454 Removed protenix==0.3.5 from https://files.pythonhosted.org/packages/8e/75/ba5a8e3b5e13eab23909185b11b044e4e3db04ade55485e9d7fe09b6e95e/protenix-0.3.5.tar.gz from build tracker '/tmp/pip-build-tracker-el5zlx4m' 2024-12-28T23:13:19,463 Created temporary directory: /tmp/pip-unpack-oc0vfd2m 2024-12-28T23:13:19,464 Created temporary directory: /tmp/pip-unpack-8uk0c24s 2024-12-28T23:13:19,465 Building wheels for collected packages: protenix 2024-12-28T23:13:19,469 Created temporary directory: /tmp/pip-wheel-feari0dd 2024-12-28T23:13:19,470 Building wheel for protenix (setup.py): started 2024-12-28T23:13:19,471 Destination directory: /tmp/pip-wheel-feari0dd 2024-12-28T23:13:19,472 Running command python setup.py bdist_wheel 2024-12-28T23:13:20,494 running bdist_wheel 2024-12-28T23:13:20,630 running build 2024-12-28T23:13:20,631 running build_py 2024-12-28T23:13:20,662 creating build/lib/configs 2024-12-28T23:13:20,665 copying configs/configs_data.py -> build/lib/configs 2024-12-28T23:13:20,667 copying configs/configs_inference.py -> build/lib/configs 2024-12-28T23:13:20,669 copying configs/configs_base.py -> build/lib/configs 2024-12-28T23:13:20,671 copying configs/__init__.py -> build/lib/configs 2024-12-28T23:13:20,674 creating build/lib/runner 2024-12-28T23:13:20,675 copying runner/batch_inference.py -> build/lib/runner 2024-12-28T23:13:20,678 copying runner/msa_search.py -> build/lib/runner 2024-12-28T23:13:20,679 copying runner/ema.py -> build/lib/runner 2024-12-28T23:13:20,681 copying runner/train.py -> build/lib/runner 2024-12-28T23:13:20,684 copying runner/dumper.py -> build/lib/runner 2024-12-28T23:13:20,686 copying runner/__init__.py -> build/lib/runner 2024-12-28T23:13:20,688 copying runner/inference.py -> build/lib/runner 2024-12-28T23:13:20,691 creating build/lib/protenix 2024-12-28T23:13:20,692 copying protenix/__init__.py -> build/lib/protenix 2024-12-28T23:13:20,694 creating build/lib/protenix/metrics 2024-12-28T23:13:20,695 copying protenix/metrics/rmsd.py -> build/lib/protenix/metrics 2024-12-28T23:13:20,698 copying protenix/metrics/lddt_metrics.py -> build/lib/protenix/metrics 2024-12-28T23:13:20,700 copying protenix/metrics/clash.py -> build/lib/protenix/metrics 2024-12-28T23:13:20,702 copying protenix/metrics/__init__.py -> build/lib/protenix/metrics 2024-12-28T23:13:20,705 creating build/lib/protenix/config 2024-12-28T23:13:20,707 copying protenix/config/extend_types.py -> build/lib/protenix/config 2024-12-28T23:13:20,709 copying protenix/config/config.py -> build/lib/protenix/config 2024-12-28T23:13:20,711 copying protenix/config/__init__.py -> build/lib/protenix/config 2024-12-28T23:13:20,713 creating build/lib/protenix/openfold_local 2024-12-28T23:13:20,714 copying protenix/openfold_local/__init__.py -> build/lib/protenix/openfold_local 2024-12-28T23:13:20,717 creating build/lib/protenix/utils 2024-12-28T23:13:20,718 copying protenix/utils/torch_utils.py -> build/lib/protenix/utils 2024-12-28T23:13:20,721 copying protenix/utils/file_io.py -> build/lib/protenix/utils 2024-12-28T23:13:20,722 copying protenix/utils/training.py -> build/lib/protenix/utils 2024-12-28T23:13:20,725 copying protenix/utils/scatter_utils.py -> build/lib/protenix/utils 2024-12-28T23:13:20,727 copying protenix/utils/lr_scheduler.py -> build/lib/protenix/utils 2024-12-28T23:13:20,729 copying protenix/utils/cropping.py -> build/lib/protenix/utils 2024-12-28T23:13:20,732 copying protenix/utils/metrics.py -> build/lib/protenix/utils 2024-12-28T23:13:20,734 copying protenix/utils/distributed.py -> build/lib/protenix/utils 2024-12-28T23:13:20,736 copying protenix/utils/geometry.py -> build/lib/protenix/utils 2024-12-28T23:13:20,738 copying protenix/utils/__init__.py -> build/lib/protenix/utils 2024-12-28T23:13:20,739 copying protenix/utils/seed.py -> build/lib/protenix/utils 2024-12-28T23:13:20,741 copying protenix/utils/logger.py -> build/lib/protenix/utils 2024-12-28T23:13:20,744 creating build/lib/protenix/data 2024-12-28T23:13:20,745 copying protenix/data/featurizer.py -> build/lib/protenix/data 2024-12-28T23:13:20,748 copying protenix/data/substructure_perms.py -> build/lib/protenix/data 2024-12-28T23:13:20,750 copying protenix/data/infer_data_pipeline.py -> build/lib/protenix/data 2024-12-28T23:13:20,752 copying protenix/data/msa_utils.py -> build/lib/protenix/data 2024-12-28T23:13:20,755 copying protenix/data/json_parser.py -> build/lib/protenix/data 2024-12-28T23:13:20,758 copying protenix/data/tokenizer.py -> build/lib/protenix/data 2024-12-28T23:13:20,760 copying protenix/data/dataset.py -> build/lib/protenix/data 2024-12-28T23:13:20,763 copying protenix/data/data_pipeline.py -> build/lib/protenix/data 2024-12-28T23:13:20,766 copying protenix/data/dataloader.py -> build/lib/protenix/data 2024-12-28T23:13:20,768 copying protenix/data/constants.py -> build/lib/protenix/data 2024-12-28T23:13:20,771 copying protenix/data/json_maker.py -> build/lib/protenix/data 2024-12-28T23:13:20,774 copying protenix/data/parser.py -> build/lib/protenix/data 2024-12-28T23:13:20,777 copying protenix/data/json_to_feature.py -> build/lib/protenix/data 2024-12-28T23:13:20,779 copying protenix/data/filter.py -> build/lib/protenix/data 2024-12-28T23:13:20,781 copying protenix/data/utils.py -> build/lib/protenix/data 2024-12-28T23:13:20,784 copying protenix/data/ccd.py -> build/lib/protenix/data 2024-12-28T23:13:20,786 copying protenix/data/__init__.py -> build/lib/protenix/data 2024-12-28T23:13:20,788 copying protenix/data/msa_featurizer.py -> build/lib/protenix/data 2024-12-28T23:13:20,791 creating build/lib/protenix/model 2024-12-28T23:13:20,792 copying protenix/model/sample_confidence.py -> build/lib/protenix/model 2024-12-28T23:13:20,795 copying protenix/model/loss.py -> build/lib/protenix/model 2024-12-28T23:13:20,806 copying protenix/model/protenix.py -> build/lib/protenix/model 2024-12-28T23:13:20,809 copying protenix/model/utils.py -> build/lib/protenix/model 2024-12-28T23:13:20,811 copying protenix/model/__init__.py -> build/lib/protenix/model 2024-12-28T23:13:20,813 copying protenix/model/generator.py -> build/lib/protenix/model 2024-12-28T23:13:20,816 creating build/lib/protenix/web_service 2024-12-28T23:13:20,817 copying protenix/web_service/dependency_url.py -> build/lib/protenix/web_service 2024-12-28T23:13:20,819 copying protenix/web_service/viewer.py -> build/lib/protenix/web_service 2024-12-28T23:13:20,822 copying protenix/web_service/prediction_visualization.py -> build/lib/protenix/web_service 2024-12-28T23:13:20,825 copying protenix/web_service/colab_request_parser.py -> build/lib/protenix/web_service 2024-12-28T23:13:20,827 copying protenix/web_service/__init__.py -> build/lib/protenix/web_service 2024-12-28T23:13:20,829 copying protenix/web_service/colab_request_utils.py -> build/lib/protenix/web_service 2024-12-28T23:13:20,831 creating build/lib/protenix/openfold_local/np 2024-12-28T23:13:20,833 copying protenix/openfold_local/np/__init__.py -> build/lib/protenix/openfold_local/np 2024-12-28T23:13:20,834 copying protenix/openfold_local/np/residue_constants.py -> build/lib/protenix/openfold_local/np 2024-12-28T23:13:20,838 creating build/lib/protenix/openfold_local/utils 2024-12-28T23:13:20,839 copying protenix/openfold_local/utils/feats.py -> build/lib/protenix/openfold_local/utils 2024-12-28T23:13:20,841 copying protenix/openfold_local/utils/chunk_utils.py -> build/lib/protenix/openfold_local/utils 2024-12-28T23:13:20,844 copying protenix/openfold_local/utils/precision_utils.py -> build/lib/protenix/openfold_local/utils 2024-12-28T23:13:20,846 copying protenix/openfold_local/utils/checkpointing.py -> build/lib/protenix/openfold_local/utils 2024-12-28T23:13:20,848 copying protenix/openfold_local/utils/rigid_utils.py -> build/lib/protenix/openfold_local/utils 2024-12-28T23:13:20,851 copying protenix/openfold_local/utils/tensor_utils.py -> build/lib/protenix/openfold_local/utils 2024-12-28T23:13:20,853 copying protenix/openfold_local/utils/__init__.py -> build/lib/protenix/openfold_local/utils 2024-12-28T23:13:20,854 copying protenix/openfold_local/utils/all_atom_multimer.py -> build/lib/protenix/openfold_local/utils 2024-12-28T23:13:20,857 creating build/lib/protenix/openfold_local/data 2024-12-28T23:13:20,858 copying protenix/openfold_local/data/templates.py -> build/lib/protenix/openfold_local/data 2024-12-28T23:13:20,861 copying protenix/openfold_local/data/errors.py -> build/lib/protenix/openfold_local/data 2024-12-28T23:13:20,863 copying protenix/openfold_local/data/mmcif_parsing.py -> build/lib/protenix/openfold_local/data 2024-12-28T23:13:20,865 copying protenix/openfold_local/data/msa_pairing.py -> build/lib/protenix/openfold_local/data 2024-12-28T23:13:20,868 copying protenix/openfold_local/data/parsers.py -> build/lib/protenix/openfold_local/data 2024-12-28T23:13:20,871 copying protenix/openfold_local/data/msa_identifiers.py -> build/lib/protenix/openfold_local/data 2024-12-28T23:13:20,873 copying protenix/openfold_local/data/__init__.py -> build/lib/protenix/openfold_local/data 2024-12-28T23:13:20,874 copying protenix/openfold_local/data/data_transforms.py -> build/lib/protenix/openfold_local/data 2024-12-28T23:13:20,877 creating build/lib/protenix/openfold_local/model 2024-12-28T23:13:20,878 copying protenix/openfold_local/model/outer_product_mean.py -> build/lib/protenix/openfold_local/model 2024-12-28T23:13:20,880 copying protenix/openfold_local/model/primitives.py -> build/lib/protenix/openfold_local/model 2024-12-28T23:13:20,883 copying protenix/openfold_local/model/triangular_multiplicative_update.py -> build/lib/protenix/openfold_local/model 2024-12-28T23:13:20,886 copying protenix/openfold_local/model/dropout.py -> build/lib/protenix/openfold_local/model 2024-12-28T23:13:20,888 copying protenix/openfold_local/model/__init__.py -> build/lib/protenix/openfold_local/model 2024-12-28T23:13:20,889 copying protenix/openfold_local/model/triangular_attention.py -> build/lib/protenix/openfold_local/model 2024-12-28T23:13:20,892 creating build/lib/protenix/openfold_local/utils/kernel 2024-12-28T23:13:20,893 copying protenix/openfold_local/utils/kernel/attention_core.py -> build/lib/protenix/openfold_local/utils/kernel 2024-12-28T23:13:20,895 copying protenix/openfold_local/utils/kernel/__init__.py -> build/lib/protenix/openfold_local/utils/kernel 2024-12-28T23:13:20,898 creating build/lib/protenix/openfold_local/utils/geometry 2024-12-28T23:13:20,899 copying protenix/openfold_local/utils/geometry/rigid_matrix_vector.py -> build/lib/protenix/openfold_local/utils/geometry 2024-12-28T23:13:20,901 copying protenix/openfold_local/utils/geometry/rotation_matrix.py -> build/lib/protenix/openfold_local/utils/geometry 2024-12-28T23:13:20,904 copying protenix/openfold_local/utils/geometry/test_utils.py -> build/lib/protenix/openfold_local/utils/geometry 2024-12-28T23:13:20,906 copying protenix/openfold_local/utils/geometry/utils.py -> build/lib/protenix/openfold_local/utils/geometry 2024-12-28T23:13:20,908 copying protenix/openfold_local/utils/geometry/__init__.py -> build/lib/protenix/openfold_local/utils/geometry 2024-12-28T23:13:20,910 copying protenix/openfold_local/utils/geometry/vector.py -> build/lib/protenix/openfold_local/utils/geometry 2024-12-28T23:13:20,912 copying protenix/openfold_local/utils/geometry/quat_rigid.py -> build/lib/protenix/openfold_local/utils/geometry 2024-12-28T23:13:20,914 creating build/lib/protenix/openfold_local/data/tools 2024-12-28T23:13:20,916 copying protenix/openfold_local/data/tools/jackhmmer.py -> build/lib/protenix/openfold_local/data/tools 2024-12-28T23:13:20,918 copying protenix/openfold_local/data/tools/utils.py -> build/lib/protenix/openfold_local/data/tools 2024-12-28T23:13:20,920 copying protenix/openfold_local/data/tools/__init__.py -> build/lib/protenix/openfold_local/data/tools 2024-12-28T23:13:20,922 creating build/lib/protenix/utils/permutation 2024-12-28T23:13:20,923 copying protenix/utils/permutation/atom_permutation.py -> build/lib/protenix/utils/permutation 2024-12-28T23:13:20,926 copying protenix/utils/permutation/permutation.py -> build/lib/protenix/utils/permutation 2024-12-28T23:13:20,928 copying protenix/utils/permutation/utils.py -> build/lib/protenix/utils/permutation 2024-12-28T23:13:20,931 copying protenix/utils/permutation/__init__.py -> build/lib/protenix/utils/permutation 2024-12-28T23:13:20,933 creating build/lib/protenix/utils/permutation/chain_permutation 2024-12-28T23:13:20,934 copying protenix/utils/permutation/chain_permutation/pocket_based_permutation.py -> build/lib/protenix/utils/permutation/chain_permutation 2024-12-28T23:13:20,937 copying protenix/utils/permutation/chain_permutation/utils.py -> build/lib/protenix/utils/permutation/chain_permutation 2024-12-28T23:13:20,938 copying protenix/utils/permutation/chain_permutation/__init__.py -> build/lib/protenix/utils/permutation/chain_permutation 2024-12-28T23:13:20,941 copying protenix/utils/permutation/chain_permutation/heuristic.py -> build/lib/protenix/utils/permutation/chain_permutation 2024-12-28T23:13:20,944 creating build/lib/protenix/model/layer_norm 2024-12-28T23:13:20,945 copying protenix/model/layer_norm/torch_ext_compile.py -> build/lib/protenix/model/layer_norm 2024-12-28T23:13:20,947 copying protenix/model/layer_norm/layer_norm.py -> build/lib/protenix/model/layer_norm 2024-12-28T23:13:20,949 copying protenix/model/layer_norm/__init__.py -> build/lib/protenix/model/layer_norm 2024-12-28T23:13:20,952 creating build/lib/protenix/model/modules 2024-12-28T23:13:20,953 copying protenix/model/modules/embedders.py -> build/lib/protenix/model/modules 2024-12-28T23:13:20,956 copying protenix/model/modules/pairformer.py -> build/lib/protenix/model/modules 2024-12-28T23:13:20,959 copying protenix/model/modules/transformer.py -> build/lib/protenix/model/modules 2024-12-28T23:13:20,963 copying protenix/model/modules/primitives.py -> build/lib/protenix/model/modules 2024-12-28T23:13:20,966 copying protenix/model/modules/frames.py -> build/lib/protenix/model/modules 2024-12-28T23:13:20,967 copying protenix/model/modules/diffusion.py -> build/lib/protenix/model/modules 2024-12-28T23:13:20,970 copying protenix/model/modules/head.py -> build/lib/protenix/model/modules 2024-12-28T23:13:20,972 copying protenix/model/modules/__init__.py -> build/lib/protenix/model/modules 2024-12-28T23:13:20,974 copying protenix/model/modules/confidence.py -> build/lib/protenix/model/modules 2024-12-28T23:13:20,976 running egg_info 2024-12-28T23:13:21,007 writing protenix.egg-info/PKG-INFO 2024-12-28T23:13:21,010 writing dependency_links to protenix.egg-info/dependency_links.txt 2024-12-28T23:13:21,012 writing entry points to protenix.egg-info/entry_points.txt 2024-12-28T23:13:21,013 writing requirements to protenix.egg-info/requires.txt 2024-12-28T23:13:21,014 writing top-level names to protenix.egg-info/top_level.txt 2024-12-28T23:13:21,065 reading manifest file 'protenix.egg-info/SOURCES.txt' 2024-12-28T23:13:21,073 adding license file 'LICENSE' 2024-12-28T23:13:21,080 writing manifest file 'protenix.egg-info/SOURCES.txt' 2024-12-28T23:13:21,083 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'protenix.model.layer_norm.kernel' is absent from the `packages` configuration. 2024-12-28T23:13:21,084 !! 2024-12-28T23:13:21,085 ******************************************************************************** 2024-12-28T23:13:21,085 ############################ 2024-12-28T23:13:21,086 # Package would be ignored # 2024-12-28T23:13:21,086 ############################ 2024-12-28T23:13:21,087 Python recognizes 'protenix.model.layer_norm.kernel' as an importable package[^1], 2024-12-28T23:13:21,087 but it is absent from setuptools' `packages` configuration. 2024-12-28T23:13:21,088 This leads to an ambiguous overall configuration. If you want to distribute this 2024-12-28T23:13:21,088 package, please make sure that 'protenix.model.layer_norm.kernel' is explicitly added 2024-12-28T23:13:21,089 to the `packages` configuration field. 2024-12-28T23:13:21,090 Alternatively, you can also rely on setuptools' discovery methods 2024-12-28T23:13:21,090 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-12-28T23:13:21,091 instead of `find_packages(...)`/`find:`). 2024-12-28T23:13:21,092 You can read more about "package discovery" on setuptools documentation page: 2024-12-28T23:13:21,093 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-12-28T23:13:21,094 If you don't want 'protenix.model.layer_norm.kernel' to be distributed and are 2024-12-28T23:13:21,095 already explicitly excluding 'protenix.model.layer_norm.kernel' via 2024-12-28T23:13:21,095 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-12-28T23:13:21,096 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-12-28T23:13:21,096 combination with a more fine grained `package-data` configuration. 2024-12-28T23:13:21,097 You can read more about "package data files" on setuptools documentation page: 2024-12-28T23:13:21,099 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-12-28T23:13:21,100 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-12-28T23:13:21,101 even if it does not contain any `.py` files. 2024-12-28T23:13:21,101 On the other hand, currently there is no concept of package data 2024-12-28T23:13:21,102 directory, all directories are treated like packages. 2024-12-28T23:13:21,102 ******************************************************************************** 2024-12-28T23:13:21,103 !! 2024-12-28T23:13:21,104 check.warn(importable) 2024-12-28T23:13:21,105 creating build/lib/protenix/model/layer_norm/kernel 2024-12-28T23:13:21,105 copying protenix/model/layer_norm/kernel/layer_norm_cuda_kernel.cu -> build/lib/protenix/model/layer_norm/kernel 2024-12-28T23:13:21,106 copying protenix/model/layer_norm/kernel/type_shim.h -> build/lib/protenix/model/layer_norm/kernel 2024-12-28T23:13:21,108 copying protenix/model/layer_norm/kernel/compat.h -> build/lib/protenix/model/layer_norm/kernel 2024-12-28T23:13:21,110 copying protenix/model/layer_norm/kernel/layer_norm_cuda.cpp -> build/lib/protenix/model/layer_norm/kernel 2024-12-28T23:13:21,151 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-12-28T23:13:21,152 !! 2024-12-28T23:13:21,153 ******************************************************************************** 2024-12-28T23:13:21,154 Please avoid running ``setup.py`` directly. 2024-12-28T23:13:21,154 Instead, use pypa/build, pypa/installer or other 2024-12-28T23:13:21,155 standards-based tools. 2024-12-28T23:13:21,155 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-12-28T23:13:21,156 ******************************************************************************** 2024-12-28T23:13:21,157 !! 2024-12-28T23:13:21,157 self.initialize_options() 2024-12-28T23:13:21,178 installing to build/bdist.linux-armv7l/wheel 2024-12-28T23:13:21,179 running install 2024-12-28T23:13:21,203 running install_lib 2024-12-28T23:13:21,230 creating build/bdist.linux-armv7l/wheel 2024-12-28T23:13:21,232 creating build/bdist.linux-armv7l/wheel/configs 2024-12-28T23:13:21,233 copying build/lib/configs/configs_data.py -> build/bdist.linux-armv7l/wheel/./configs 2024-12-28T23:13:21,236 copying build/lib/configs/configs_inference.py -> build/bdist.linux-armv7l/wheel/./configs 2024-12-28T23:13:21,237 copying build/lib/configs/configs_base.py -> build/bdist.linux-armv7l/wheel/./configs 2024-12-28T23:13:21,239 copying build/lib/configs/__init__.py -> build/bdist.linux-armv7l/wheel/./configs 2024-12-28T23:13:21,242 creating build/bdist.linux-armv7l/wheel/runner 2024-12-28T23:13:21,243 copying build/lib/runner/batch_inference.py -> build/bdist.linux-armv7l/wheel/./runner 2024-12-28T23:13:21,246 copying build/lib/runner/msa_search.py -> build/bdist.linux-armv7l/wheel/./runner 2024-12-28T23:13:21,248 copying build/lib/runner/ema.py -> build/bdist.linux-armv7l/wheel/./runner 2024-12-28T23:13:21,250 copying build/lib/runner/train.py -> build/bdist.linux-armv7l/wheel/./runner 2024-12-28T23:13:21,253 copying build/lib/runner/dumper.py -> build/bdist.linux-armv7l/wheel/./runner 2024-12-28T23:13:21,255 copying build/lib/runner/__init__.py -> build/bdist.linux-armv7l/wheel/./runner 2024-12-28T23:13:21,256 copying build/lib/runner/inference.py -> build/bdist.linux-armv7l/wheel/./runner 2024-12-28T23:13:21,259 creating build/bdist.linux-armv7l/wheel/protenix 2024-12-28T23:13:21,261 creating build/bdist.linux-armv7l/wheel/protenix/metrics 2024-12-28T23:13:21,262 copying build/lib/protenix/metrics/rmsd.py -> build/bdist.linux-armv7l/wheel/./protenix/metrics 2024-12-28T23:13:21,265 copying build/lib/protenix/metrics/lddt_metrics.py -> build/bdist.linux-armv7l/wheel/./protenix/metrics 2024-12-28T23:13:21,267 copying build/lib/protenix/metrics/clash.py -> build/bdist.linux-armv7l/wheel/./protenix/metrics 2024-12-28T23:13:21,269 copying build/lib/protenix/metrics/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/metrics 2024-12-28T23:13:21,271 creating build/bdist.linux-armv7l/wheel/protenix/config 2024-12-28T23:13:21,272 copying build/lib/protenix/config/extend_types.py -> build/bdist.linux-armv7l/wheel/./protenix/config 2024-12-28T23:13:21,274 copying build/lib/protenix/config/config.py -> build/bdist.linux-armv7l/wheel/./protenix/config 2024-12-28T23:13:21,277 copying build/lib/protenix/config/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/config 2024-12-28T23:13:21,279 creating build/bdist.linux-armv7l/wheel/protenix/openfold_local 2024-12-28T23:13:21,281 creating build/bdist.linux-armv7l/wheel/protenix/openfold_local/np 2024-12-28T23:13:21,282 copying build/lib/protenix/openfold_local/np/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/np 2024-12-28T23:13:21,284 copying build/lib/protenix/openfold_local/np/residue_constants.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/np 2024-12-28T23:13:21,287 creating build/bdist.linux-armv7l/wheel/protenix/openfold_local/utils 2024-12-28T23:13:21,289 creating build/bdist.linux-armv7l/wheel/protenix/openfold_local/utils/kernel 2024-12-28T23:13:21,290 copying build/lib/protenix/openfold_local/utils/kernel/attention_core.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils/kernel 2024-12-28T23:13:21,292 copying build/lib/protenix/openfold_local/utils/kernel/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils/kernel 2024-12-28T23:13:21,294 creating build/bdist.linux-armv7l/wheel/protenix/openfold_local/utils/geometry 2024-12-28T23:13:21,295 copying build/lib/protenix/openfold_local/utils/geometry/rigid_matrix_vector.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils/geometry 2024-12-28T23:13:21,298 copying build/lib/protenix/openfold_local/utils/geometry/rotation_matrix.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils/geometry 2024-12-28T23:13:21,300 copying build/lib/protenix/openfold_local/utils/geometry/test_utils.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils/geometry 2024-12-28T23:13:21,302 copying build/lib/protenix/openfold_local/utils/geometry/utils.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils/geometry 2024-12-28T23:13:21,304 copying build/lib/protenix/openfold_local/utils/geometry/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils/geometry 2024-12-28T23:13:21,306 copying build/lib/protenix/openfold_local/utils/geometry/vector.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils/geometry 2024-12-28T23:13:21,308 copying build/lib/protenix/openfold_local/utils/geometry/quat_rigid.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils/geometry 2024-12-28T23:13:21,311 copying build/lib/protenix/openfold_local/utils/feats.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils 2024-12-28T23:13:21,313 copying build/lib/protenix/openfold_local/utils/chunk_utils.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils 2024-12-28T23:13:21,315 copying build/lib/protenix/openfold_local/utils/precision_utils.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils 2024-12-28T23:13:21,317 copying build/lib/protenix/openfold_local/utils/checkpointing.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils 2024-12-28T23:13:21,319 copying build/lib/protenix/openfold_local/utils/rigid_utils.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils 2024-12-28T23:13:21,322 copying build/lib/protenix/openfold_local/utils/tensor_utils.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils 2024-12-28T23:13:21,324 copying build/lib/protenix/openfold_local/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils 2024-12-28T23:13:21,325 copying build/lib/protenix/openfold_local/utils/all_atom_multimer.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/utils 2024-12-28T23:13:21,328 creating build/bdist.linux-armv7l/wheel/protenix/openfold_local/data 2024-12-28T23:13:21,329 copying build/lib/protenix/openfold_local/data/templates.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data 2024-12-28T23:13:21,332 copying build/lib/protenix/openfold_local/data/errors.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data 2024-12-28T23:13:21,334 copying build/lib/protenix/openfold_local/data/mmcif_parsing.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data 2024-12-28T23:13:21,337 creating build/bdist.linux-armv7l/wheel/protenix/openfold_local/data/tools 2024-12-28T23:13:21,338 copying build/lib/protenix/openfold_local/data/tools/jackhmmer.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data/tools 2024-12-28T23:13:21,341 copying build/lib/protenix/openfold_local/data/tools/utils.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data/tools 2024-12-28T23:13:21,343 copying build/lib/protenix/openfold_local/data/tools/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data/tools 2024-12-28T23:13:21,345 copying build/lib/protenix/openfold_local/data/msa_pairing.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data 2024-12-28T23:13:21,347 copying build/lib/protenix/openfold_local/data/parsers.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data 2024-12-28T23:13:21,350 copying build/lib/protenix/openfold_local/data/msa_identifiers.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data 2024-12-28T23:13:21,351 copying build/lib/protenix/openfold_local/data/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data 2024-12-28T23:13:21,353 copying build/lib/protenix/openfold_local/data/data_transforms.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/data 2024-12-28T23:13:21,356 creating build/bdist.linux-armv7l/wheel/protenix/openfold_local/model 2024-12-28T23:13:21,357 copying build/lib/protenix/openfold_local/model/outer_product_mean.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/model 2024-12-28T23:13:21,359 copying build/lib/protenix/openfold_local/model/primitives.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/model 2024-12-28T23:13:21,362 copying build/lib/protenix/openfold_local/model/triangular_multiplicative_update.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/model 2024-12-28T23:13:21,365 copying build/lib/protenix/openfold_local/model/dropout.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/model 2024-12-28T23:13:21,366 copying build/lib/protenix/openfold_local/model/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/model 2024-12-28T23:13:21,368 copying build/lib/protenix/openfold_local/model/triangular_attention.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local/model 2024-12-28T23:13:21,370 copying build/lib/protenix/openfold_local/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/openfold_local 2024-12-28T23:13:21,372 creating build/bdist.linux-armv7l/wheel/protenix/utils 2024-12-28T23:13:21,373 copying build/lib/protenix/utils/torch_utils.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,376 copying build/lib/protenix/utils/file_io.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,377 copying build/lib/protenix/utils/training.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,380 copying build/lib/protenix/utils/scatter_utils.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,382 copying build/lib/protenix/utils/lr_scheduler.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,384 copying build/lib/protenix/utils/cropping.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,387 copying build/lib/protenix/utils/metrics.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,389 creating build/bdist.linux-armv7l/wheel/protenix/utils/permutation 2024-12-28T23:13:21,391 creating build/bdist.linux-armv7l/wheel/protenix/utils/permutation/chain_permutation 2024-12-28T23:13:21,392 copying build/lib/protenix/utils/permutation/chain_permutation/pocket_based_permutation.py -> build/bdist.linux-armv7l/wheel/./protenix/utils/permutation/chain_permutation 2024-12-28T23:13:21,395 copying build/lib/protenix/utils/permutation/chain_permutation/utils.py -> build/bdist.linux-armv7l/wheel/./protenix/utils/permutation/chain_permutation 2024-12-28T23:13:21,397 copying build/lib/protenix/utils/permutation/chain_permutation/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/utils/permutation/chain_permutation 2024-12-28T23:13:21,399 copying build/lib/protenix/utils/permutation/chain_permutation/heuristic.py -> build/bdist.linux-armv7l/wheel/./protenix/utils/permutation/chain_permutation 2024-12-28T23:13:21,402 copying build/lib/protenix/utils/permutation/atom_permutation.py -> build/bdist.linux-armv7l/wheel/./protenix/utils/permutation 2024-12-28T23:13:21,405 copying build/lib/protenix/utils/permutation/permutation.py -> build/bdist.linux-armv7l/wheel/./protenix/utils/permutation 2024-12-28T23:13:21,407 copying build/lib/protenix/utils/permutation/utils.py -> build/bdist.linux-armv7l/wheel/./protenix/utils/permutation 2024-12-28T23:13:21,410 copying build/lib/protenix/utils/permutation/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/utils/permutation 2024-12-28T23:13:21,411 copying build/lib/protenix/utils/distributed.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,413 copying build/lib/protenix/utils/geometry.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,415 copying build/lib/protenix/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,416 copying build/lib/protenix/utils/seed.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,418 copying build/lib/protenix/utils/logger.py -> build/bdist.linux-armv7l/wheel/./protenix/utils 2024-12-28T23:13:21,421 creating build/bdist.linux-armv7l/wheel/protenix/data 2024-12-28T23:13:21,422 copying build/lib/protenix/data/featurizer.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,425 copying build/lib/protenix/data/substructure_perms.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,427 copying build/lib/protenix/data/infer_data_pipeline.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,429 copying build/lib/protenix/data/msa_utils.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,432 copying build/lib/protenix/data/json_parser.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,435 copying build/lib/protenix/data/tokenizer.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,437 copying build/lib/protenix/data/dataset.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,440 copying build/lib/protenix/data/data_pipeline.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,443 copying build/lib/protenix/data/dataloader.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,445 copying build/lib/protenix/data/constants.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,448 copying build/lib/protenix/data/json_maker.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,450 copying build/lib/protenix/data/parser.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,453 copying build/lib/protenix/data/json_to_feature.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,455 copying build/lib/protenix/data/filter.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,457 copying build/lib/protenix/data/utils.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,460 copying build/lib/protenix/data/ccd.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,462 copying build/lib/protenix/data/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,464 copying build/lib/protenix/data/msa_featurizer.py -> build/bdist.linux-armv7l/wheel/./protenix/data 2024-12-28T23:13:21,467 creating build/bdist.linux-armv7l/wheel/protenix/model 2024-12-28T23:13:21,469 copying build/lib/protenix/model/sample_confidence.py -> build/bdist.linux-armv7l/wheel/./protenix/model 2024-12-28T23:13:21,472 creating build/bdist.linux-armv7l/wheel/protenix/model/layer_norm 2024-12-28T23:13:21,474 copying build/lib/protenix/model/layer_norm/torch_ext_compile.py -> build/bdist.linux-armv7l/wheel/./protenix/model/layer_norm 2024-12-28T23:13:21,476 creating build/bdist.linux-armv7l/wheel/protenix/model/layer_norm/kernel 2024-12-28T23:13:21,477 copying build/lib/protenix/model/layer_norm/kernel/layer_norm_cuda_kernel.cu -> build/bdist.linux-armv7l/wheel/./protenix/model/layer_norm/kernel 2024-12-28T23:13:21,480 copying build/lib/protenix/model/layer_norm/kernel/type_shim.h -> build/bdist.linux-armv7l/wheel/./protenix/model/layer_norm/kernel 2024-12-28T23:13:21,483 copying build/lib/protenix/model/layer_norm/kernel/compat.h -> build/bdist.linux-armv7l/wheel/./protenix/model/layer_norm/kernel 2024-12-28T23:13:21,485 copying build/lib/protenix/model/layer_norm/kernel/layer_norm_cuda.cpp -> build/bdist.linux-armv7l/wheel/./protenix/model/layer_norm/kernel 2024-12-28T23:13:21,487 copying build/lib/protenix/model/layer_norm/layer_norm.py -> build/bdist.linux-armv7l/wheel/./protenix/model/layer_norm 2024-12-28T23:13:21,489 copying build/lib/protenix/model/layer_norm/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/model/layer_norm 2024-12-28T23:13:21,491 copying build/lib/protenix/model/loss.py -> build/bdist.linux-armv7l/wheel/./protenix/model 2024-12-28T23:13:21,494 copying build/lib/protenix/model/protenix.py -> build/bdist.linux-armv7l/wheel/./protenix/model 2024-12-28T23:13:21,497 copying build/lib/protenix/model/utils.py -> build/bdist.linux-armv7l/wheel/./protenix/model 2024-12-28T23:13:21,499 copying build/lib/protenix/model/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/model 2024-12-28T23:13:21,501 creating build/bdist.linux-armv7l/wheel/protenix/model/modules 2024-12-28T23:13:21,502 copying build/lib/protenix/model/modules/embedders.py -> build/bdist.linux-armv7l/wheel/./protenix/model/modules 2024-12-28T23:13:21,505 copying build/lib/protenix/model/modules/pairformer.py -> build/bdist.linux-armv7l/wheel/./protenix/model/modules 2024-12-28T23:13:21,507 copying build/lib/protenix/model/modules/transformer.py -> build/bdist.linux-armv7l/wheel/./protenix/model/modules 2024-12-28T23:13:21,510 copying build/lib/protenix/model/modules/primitives.py -> build/bdist.linux-armv7l/wheel/./protenix/model/modules 2024-12-28T23:13:21,513 copying build/lib/protenix/model/modules/frames.py -> build/bdist.linux-armv7l/wheel/./protenix/model/modules 2024-12-28T23:13:21,515 copying build/lib/protenix/model/modules/diffusion.py -> build/bdist.linux-armv7l/wheel/./protenix/model/modules 2024-12-28T23:13:21,518 copying build/lib/protenix/model/modules/head.py -> build/bdist.linux-armv7l/wheel/./protenix/model/modules 2024-12-28T23:13:21,519 copying build/lib/protenix/model/modules/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/model/modules 2024-12-28T23:13:21,521 copying build/lib/protenix/model/modules/confidence.py -> build/bdist.linux-armv7l/wheel/./protenix/model/modules 2024-12-28T23:13:21,523 copying build/lib/protenix/model/generator.py -> build/bdist.linux-armv7l/wheel/./protenix/model 2024-12-28T23:13:21,526 copying build/lib/protenix/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix 2024-12-28T23:13:21,528 creating build/bdist.linux-armv7l/wheel/protenix/web_service 2024-12-28T23:13:21,529 copying build/lib/protenix/web_service/dependency_url.py -> build/bdist.linux-armv7l/wheel/./protenix/web_service 2024-12-28T23:13:21,531 copying build/lib/protenix/web_service/viewer.py -> build/bdist.linux-armv7l/wheel/./protenix/web_service 2024-12-28T23:13:21,533 copying build/lib/protenix/web_service/prediction_visualization.py -> build/bdist.linux-armv7l/wheel/./protenix/web_service 2024-12-28T23:13:21,536 copying build/lib/protenix/web_service/colab_request_parser.py -> build/bdist.linux-armv7l/wheel/./protenix/web_service 2024-12-28T23:13:21,539 copying build/lib/protenix/web_service/__init__.py -> build/bdist.linux-armv7l/wheel/./protenix/web_service 2024-12-28T23:13:21,540 copying build/lib/protenix/web_service/colab_request_utils.py -> build/bdist.linux-armv7l/wheel/./protenix/web_service 2024-12-28T23:13:21,542 running install_data 2024-12-28T23:13:21,570 creating build/bdist.linux-armv7l/wheel/protenix-0.3.5.data/data 2024-12-28T23:13:21,571 warning: install_data: setup script did not provide a directory for 'requirements.txt' -- installing right in 'build/bdist.linux-armv7l/wheel/protenix-0.3.5.data/data' 2024-12-28T23:13:21,573 copying requirements.txt -> build/bdist.linux-armv7l/wheel/protenix-0.3.5.data/data 2024-12-28T23:13:21,574 running install_egg_info 2024-12-28T23:13:21,608 Copying protenix.egg-info to build/bdist.linux-armv7l/wheel/./protenix-0.3.5-py3.11.egg-info 2024-12-28T23:13:21,620 running install_scripts 2024-12-28T23:13:21,639 creating build/bdist.linux-armv7l/wheel/protenix-0.3.5.dist-info/WHEEL 2024-12-28T23:13:21,642 creating '/tmp/pip-wheel-feari0dd/protenix-0.3.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-12-28T23:13:21,644 adding 'configs/__init__.py' 2024-12-28T23:13:21,646 adding 'configs/configs_base.py' 2024-12-28T23:13:21,647 adding 'configs/configs_data.py' 2024-12-28T23:13:21,649 adding 'configs/configs_inference.py' 2024-12-28T23:13:21,650 adding 'protenix/__init__.py' 2024-12-28T23:13:21,652 adding 'protenix/config/__init__.py' 2024-12-28T23:13:21,654 adding 'protenix/config/config.py' 2024-12-28T23:13:21,655 adding 'protenix/config/extend_types.py' 2024-12-28T23:13:21,657 adding 'protenix/data/__init__.py' 2024-12-28T23:13:21,660 adding 'protenix/data/ccd.py' 2024-12-28T23:13:21,664 adding 'protenix/data/constants.py' 2024-12-28T23:13:21,666 adding 'protenix/data/data_pipeline.py' 2024-12-28T23:13:21,668 adding 'protenix/data/dataloader.py' 2024-12-28T23:13:21,673 adding 'protenix/data/dataset.py' 2024-12-28T23:13:21,677 adding 'protenix/data/featurizer.py' 2024-12-28T23:13:21,679 adding 'protenix/data/filter.py' 2024-12-28T23:13:21,681 adding 'protenix/data/infer_data_pipeline.py' 2024-12-28T23:13:21,683 adding 'protenix/data/json_maker.py' 2024-12-28T23:13:21,686 adding 'protenix/data/json_parser.py' 2024-12-28T23:13:21,688 adding 'protenix/data/json_to_feature.py' 2024-12-28T23:13:21,693 adding 'protenix/data/msa_featurizer.py' 2024-12-28T23:13:21,698 adding 'protenix/data/msa_utils.py' 2024-12-28T23:13:21,704 adding 'protenix/data/parser.py' 2024-12-28T23:13:21,706 adding 'protenix/data/substructure_perms.py' 2024-12-28T23:13:21,708 adding 'protenix/data/tokenizer.py' 2024-12-28T23:13:21,711 adding 'protenix/data/utils.py' 2024-12-28T23:13:21,713 adding 'protenix/metrics/__init__.py' 2024-12-28T23:13:21,715 adding 'protenix/metrics/clash.py' 2024-12-28T23:13:21,717 adding 'protenix/metrics/lddt_metrics.py' 2024-12-28T23:13:21,718 adding 'protenix/metrics/rmsd.py' 2024-12-28T23:13:21,720 adding 'protenix/model/__init__.py' 2024-12-28T23:13:21,722 adding 'protenix/model/generator.py' 2024-12-28T23:13:21,728 adding 'protenix/model/loss.py' 2024-12-28T23:13:21,732 adding 'protenix/model/protenix.py' 2024-12-28T23:13:21,735 adding 'protenix/model/sample_confidence.py' 2024-12-28T23:13:21,737 adding 'protenix/model/utils.py' 2024-12-28T23:13:21,739 adding 'protenix/model/layer_norm/__init__.py' 2024-12-28T23:13:21,740 adding 'protenix/model/layer_norm/layer_norm.py' 2024-12-28T23:13:21,742 adding 'protenix/model/layer_norm/torch_ext_compile.py' 2024-12-28T23:13:21,743 adding 'protenix/model/layer_norm/kernel/compat.h' 2024-12-28T23:13:21,745 adding 'protenix/model/layer_norm/kernel/layer_norm_cuda.cpp' 2024-12-28T23:13:21,748 adding 'protenix/model/layer_norm/kernel/layer_norm_cuda_kernel.cu' 2024-12-28T23:13:21,749 adding 'protenix/model/layer_norm/kernel/type_shim.h' 2024-12-28T23:13:21,751 adding 'protenix/model/modules/__init__.py' 2024-12-28T23:13:21,753 adding 'protenix/model/modules/confidence.py' 2024-12-28T23:13:21,756 adding 'protenix/model/modules/diffusion.py' 2024-12-28T23:13:21,758 adding 'protenix/model/modules/embedders.py' 2024-12-28T23:13:21,759 adding 'protenix/model/modules/frames.py' 2024-12-28T23:13:21,761 adding 'protenix/model/modules/head.py' 2024-12-28T23:13:21,764 adding 'protenix/model/modules/pairformer.py' 2024-12-28T23:13:21,768 adding 'protenix/model/modules/primitives.py' 2024-12-28T23:13:21,771 adding 'protenix/model/modules/transformer.py' 2024-12-28T23:13:21,773 adding 'protenix/openfold_local/__init__.py' 2024-12-28T23:13:21,775 adding 'protenix/openfold_local/data/__init__.py' 2024-12-28T23:13:21,777 adding 'protenix/openfold_local/data/data_transforms.py' 2024-12-28T23:13:21,778 adding 'protenix/openfold_local/data/errors.py' 2024-12-28T23:13:21,781 adding 'protenix/openfold_local/data/mmcif_parsing.py' 2024-12-28T23:13:21,782 adding 'protenix/openfold_local/data/msa_identifiers.py' 2024-12-28T23:13:21,785 adding 'protenix/openfold_local/data/msa_pairing.py' 2024-12-28T23:13:21,788 adding 'protenix/openfold_local/data/parsers.py' 2024-12-28T23:13:21,791 adding 'protenix/openfold_local/data/templates.py' 2024-12-28T23:13:21,793 adding 'protenix/openfold_local/data/tools/__init__.py' 2024-12-28T23:13:21,795 adding 'protenix/openfold_local/data/tools/jackhmmer.py' 2024-12-28T23:13:21,797 adding 'protenix/openfold_local/data/tools/utils.py' 2024-12-28T23:13:21,798 adding 'protenix/openfold_local/model/__init__.py' 2024-12-28T23:13:21,800 adding 'protenix/openfold_local/model/dropout.py' 2024-12-28T23:13:21,801 adding 'protenix/openfold_local/model/outer_product_mean.py' 2024-12-28T23:13:21,804 adding 'protenix/openfold_local/model/primitives.py' 2024-12-28T23:13:21,806 adding 'protenix/openfold_local/model/triangular_attention.py' 2024-12-28T23:13:21,808 adding 'protenix/openfold_local/model/triangular_multiplicative_update.py' 2024-12-28T23:13:21,810 adding 'protenix/openfold_local/np/__init__.py' 2024-12-28T23:13:21,815 adding 'protenix/openfold_local/np/residue_constants.py' 2024-12-28T23:13:21,817 adding 'protenix/openfold_local/utils/__init__.py' 2024-12-28T23:13:21,819 adding 'protenix/openfold_local/utils/all_atom_multimer.py' 2024-12-28T23:13:21,821 adding 'protenix/openfold_local/utils/checkpointing.py' 2024-12-28T23:13:21,823 adding 'protenix/openfold_local/utils/chunk_utils.py' 2024-12-28T23:13:21,825 adding 'protenix/openfold_local/utils/feats.py' 2024-12-28T23:13:21,826 adding 'protenix/openfold_local/utils/precision_utils.py' 2024-12-28T23:13:21,831 adding 'protenix/openfold_local/utils/rigid_utils.py' 2024-12-28T23:13:21,832 adding 'protenix/openfold_local/utils/tensor_utils.py' 2024-12-28T23:13:21,834 adding 'protenix/openfold_local/utils/geometry/__init__.py' 2024-12-28T23:13:21,836 adding 'protenix/openfold_local/utils/geometry/quat_rigid.py' 2024-12-28T23:13:21,837 adding 'protenix/openfold_local/utils/geometry/rigid_matrix_vector.py' 2024-12-28T23:13:21,839 adding 'protenix/openfold_local/utils/geometry/rotation_matrix.py' 2024-12-28T23:13:21,840 adding 'protenix/openfold_local/utils/geometry/test_utils.py' 2024-12-28T23:13:21,841 adding 'protenix/openfold_local/utils/geometry/utils.py' 2024-12-28T23:13:21,843 adding 'protenix/openfold_local/utils/geometry/vector.py' 2024-12-28T23:13:21,845 adding 'protenix/openfold_local/utils/kernel/__init__.py' 2024-12-28T23:13:21,846 adding 'protenix/openfold_local/utils/kernel/attention_core.py' 2024-12-28T23:13:21,848 adding 'protenix/utils/__init__.py' 2024-12-28T23:13:21,851 adding 'protenix/utils/cropping.py' 2024-12-28T23:13:21,853 adding 'protenix/utils/distributed.py' 2024-12-28T23:13:21,854 adding 'protenix/utils/file_io.py' 2024-12-28T23:13:21,856 adding 'protenix/utils/geometry.py' 2024-12-28T23:13:21,857 adding 'protenix/utils/logger.py' 2024-12-28T23:13:21,859 adding 'protenix/utils/lr_scheduler.py' 2024-12-28T23:13:21,860 adding 'protenix/utils/metrics.py' 2024-12-28T23:13:21,862 adding 'protenix/utils/scatter_utils.py' 2024-12-28T23:13:21,863 adding 'protenix/utils/seed.py' 2024-12-28T23:13:21,864 adding 'protenix/utils/torch_utils.py' 2024-12-28T23:13:21,866 adding 'protenix/utils/training.py' 2024-12-28T23:13:21,867 adding 'protenix/utils/permutation/__init__.py' 2024-12-28T23:13:21,871 adding 'protenix/utils/permutation/atom_permutation.py' 2024-12-28T23:13:21,874 adding 'protenix/utils/permutation/permutation.py' 2024-12-28T23:13:21,876 adding 'protenix/utils/permutation/utils.py' 2024-12-28T23:13:21,878 adding 'protenix/utils/permutation/chain_permutation/__init__.py' 2024-12-28T23:13:21,882 adding 'protenix/utils/permutation/chain_permutation/heuristic.py' 2024-12-28T23:13:21,884 adding 'protenix/utils/permutation/chain_permutation/pocket_based_permutation.py' 2024-12-28T23:13:21,885 adding 'protenix/utils/permutation/chain_permutation/utils.py' 2024-12-28T23:13:21,887 adding 'protenix/web_service/__init__.py' 2024-12-28T23:13:21,889 adding 'protenix/web_service/colab_request_parser.py' 2024-12-28T23:13:21,890 adding 'protenix/web_service/colab_request_utils.py' 2024-12-28T23:13:21,891 adding 'protenix/web_service/dependency_url.py' 2024-12-28T23:13:21,893 adding 'protenix/web_service/prediction_visualization.py' 2024-12-28T23:13:21,895 adding 'protenix/web_service/viewer.py' 2024-12-28T23:13:21,897 adding 'protenix-0.3.5.data/data/requirements.txt' 2024-12-28T23:13:21,900 adding 'runner/__init__.py' 2024-12-28T23:13:21,902 adding 'runner/batch_inference.py' 2024-12-28T23:13:21,903 adding 'runner/dumper.py' 2024-12-28T23:13:21,905 adding 'runner/ema.py' 2024-12-28T23:13:21,907 adding 'runner/inference.py' 2024-12-28T23:13:21,908 adding 'runner/msa_search.py' 2024-12-28T23:13:21,911 adding 'runner/train.py' 2024-12-28T23:13:21,913 adding 'protenix-0.3.5.dist-info/LICENSE' 2024-12-28T23:13:21,914 adding 'protenix-0.3.5.dist-info/METADATA' 2024-12-28T23:13:21,915 adding 'protenix-0.3.5.dist-info/WHEEL' 2024-12-28T23:13:21,916 adding 'protenix-0.3.5.dist-info/entry_points.txt' 2024-12-28T23:13:21,917 adding 'protenix-0.3.5.dist-info/top_level.txt' 2024-12-28T23:13:21,919 adding 'protenix-0.3.5.dist-info/RECORD' 2024-12-28T23:13:21,926 removing build/bdist.linux-armv7l/wheel 2024-12-28T23:13:22,071 Building wheel for protenix (setup.py): finished with status 'done' 2024-12-28T23:13:22,078 Created wheel for protenix: filename=protenix-0.3.5-py3-none-any.whl size=383815 sha256=3719630079eefd5a0ef318cdb45dae22c0b16dd3c6b29bbfcd3b175aa939770b 2024-12-28T23:13:22,079 Stored in directory: /tmp/pip-ephem-wheel-cache-miuo23zc/wheels/86/37/33/26b20022d5e2f00faab4d4deb7725e4948b71aec7558d2174b 2024-12-28T23:13:22,093 Successfully built protenix 2024-12-28T23:13:22,110 Removed build tracker: '/tmp/pip-build-tracker-el5zlx4m'