2025-01-08T10:00:06,535 Created temporary directory: /tmp/pip-build-tracker-q58ccy7t
2025-01-08T10:00:06,536 Initialized build tracking at /tmp/pip-build-tracker-q58ccy7t
2025-01-08T10:00:06,537 Created build tracker: /tmp/pip-build-tracker-q58ccy7t
2025-01-08T10:00:06,538 Entered build tracker: /tmp/pip-build-tracker-q58ccy7t
2025-01-08T10:00:06,539 Created temporary directory: /tmp/pip-wheel-jee6k5bk
2025-01-08T10:00:06,543 Created temporary directory: /tmp/pip-ephem-wheel-cache-ta9sb9c4
2025-01-08T10:00:06,588 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-01-08T10:00:06,591 2 location(s) to search for versions of soapy-st:
2025-01-08T10:00:06,591 * https://pypi.org/simple/soapy-st/
2025-01-08T10:00:06,591 * https://www.piwheels.org/simple/soapy-st/
2025-01-08T10:00:06,592 Fetching project page and analyzing links: https://pypi.org/simple/soapy-st/
2025-01-08T10:00:06,593 Getting page https://pypi.org/simple/soapy-st/
2025-01-08T10:00:06,595 Found index url https://pypi.org/simple/
2025-01-08T10:00:06,822 Fetched page https://pypi.org/simple/soapy-st/ as application/vnd.pypi.simple.v1+json
2025-01-08T10:00:06,827   Found link https://files.pythonhosted.org/packages/26/ef/07d2cc6a416a2962d02658155c1a0ba11bfc0f294a28701a880888aadebf/SOAPy-st-0.1.0.tar.gz (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9), version: 0.1.0
2025-01-08T10:00:06,828   Skipping link: No binaries permitted for soapy-st: https://files.pythonhosted.org/packages/a4/47/c919aacc1a29a1509890a939821621d8bfea16fc15efdd1b845830b3c0ea/SOAPy_st-0.1.0-py3-none-any.whl (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9)
2025-01-08T10:00:06,829   Found link https://files.pythonhosted.org/packages/6a/c4/2aae67cff1af7affce1ecdf80fa2f0aeca0cc34c34d524f690d80c79662e/SOAPy-st-0.1.2.tar.gz (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9), version: 0.1.2
2025-01-08T10:00:06,830   Skipping link: No binaries permitted for soapy-st: https://files.pythonhosted.org/packages/f5/cc/585b624914621cbff914d1d73e94a392ad0631a17a55ef8b9025ff9d7bde/SOAPy_st-0.1.2-py3-none-any.whl (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9)
2025-01-08T10:00:06,831   Found link https://files.pythonhosted.org/packages/14/bf/41fa18c6356fa85d7e53bc8f384c6169a613ff8074cd6fe26d9734bdb258/SOAPy-st-0.1.3.tar.gz (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9), version: 0.1.3
2025-01-08T10:00:06,831   Skipping link: No binaries permitted for soapy-st: https://files.pythonhosted.org/packages/01/76/0370ef54a91fc2dacec2581cdbe1cecef35f9880afd556ba974b92726b02/SOAPy_st-0.1.3-py3-none-any.whl (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9)
2025-01-08T10:00:06,832   Found link https://files.pythonhosted.org/packages/44/90/046401a8b275c9ccefb48083c6b59ae71ea2146fac4f85ddf38e92dcbc48/SOAPy-st-0.1.4.tar.gz (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9), version: 0.1.4
2025-01-08T10:00:06,833   Skipping link: No binaries permitted for soapy-st: https://files.pythonhosted.org/packages/a7/3a/827460d431b0d1718673606675e4bf23b17eaae4b26be66803c459a93228/SOAPy_st-0.1.4-py3-none-any.whl (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9)
2025-01-08T10:00:06,834   Found link https://files.pythonhosted.org/packages/36/8c/aad31bbb5ad56da395c7761983c7425dd0fb7556d10d3d9b9491267717b2/SOAPy-st-0.1.5.tar.gz (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9), version: 0.1.5
2025-01-08T10:00:06,835   Skipping link: No binaries permitted for soapy-st: https://files.pythonhosted.org/packages/c9/d8/42a67874b6dae28b6fb7695a3ba9d8e876a2b979836c9ce5bc11542b7ce6/SOAPy_st-0.1.5-py3-none-any.whl (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9)
2025-01-08T10:00:06,836   Found link https://files.pythonhosted.org/packages/b1/bc/b92228426416290c0fbf49acfe19da61a1d519170ba73f37a4d40abec2e0/SOAPy-st-0.1.6.tar.gz (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9), version: 0.1.6
2025-01-08T10:00:06,837   Skipping link: No binaries permitted for soapy-st: https://files.pythonhosted.org/packages/3b/75/d09025b4ebab5c67f5099748128897ac2f03fe137394ee68c266e271ddb5/SOAPy_st-0.1.6-py3-none-any.whl (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9)
2025-01-08T10:00:06,837   Skipping link: No binaries permitted for soapy-st: https://files.pythonhosted.org/packages/1b/e2/988a827aec3aaec819c8ae2818c0c61dece530373490005a31f390559642/SOAPy_st-0.1.7-py3-none-any.whl (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9)
2025-01-08T10:00:06,839   Found link https://files.pythonhosted.org/packages/f5/cd/2a53e3299826d82f26b446ff0b33755d11f05cbac8e7b3deef557408dd7b/SOAPy_st-0.1.7.tar.gz (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9), version: 0.1.7
2025-01-08T10:00:06,839   Skipping link: No binaries permitted for soapy-st: https://files.pythonhosted.org/packages/2f/c1/0b0a8d7b79037c1676372acc5ce06a4b1dcc042b9626d3e5aca72486b21a/SOAPy_st-0.1.8-py3-none-any.whl (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9)
2025-01-08T10:00:06,840   Found link https://files.pythonhosted.org/packages/45/7c/3466e5548b1b78fc48bc95a8c6494161eed6829b8b6c383290f08b8e7928/SOAPy_st-0.1.8.tar.gz (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9), version: 0.1.8
2025-01-08T10:00:06,841   Skipping link: No binaries permitted for soapy-st: https://files.pythonhosted.org/packages/ab/9a/91323cc4ff8c2275eaef296f45e04b1b1ac767861e18b6f9c105654906e1/SOAPy_st-0.1.9-py3-none-any.whl (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9)
2025-01-08T10:00:06,842   Found link https://files.pythonhosted.org/packages/04/8f/2ef71dd322267cf1eb6d71b38c75621c56bb086963b551a0d91bffa767d9/SOAPy_st-0.1.9.tar.gz (from https://pypi.org/simple/soapy-st/) (requires-python:>=3.9), version: 0.1.9
2025-01-08T10:00:06,843 Fetching project page and analyzing links: https://www.piwheels.org/simple/soapy-st/
2025-01-08T10:00:06,843 Getting page https://www.piwheels.org/simple/soapy-st/
2025-01-08T10:00:06,845 Found index url https://www.piwheels.org/simple/
2025-01-08T10:00:07,076 Fetched page https://www.piwheels.org/simple/soapy-st/ as text/html
2025-01-08T10:00:07,078   Skipping link: No binaries permitted for soapy-st: https://www.piwheels.org/simple/soapy-st/SOAPy_st-0.1.7-py3-none-any.whl#sha256=47ef0b65f7e6470511a5ef5fd5fe2a052d619946cfd5235ced410e7a90a41e1e (from https://www.piwheels.org/simple/soapy-st/) (requires-python:>=3.9)
2025-01-08T10:00:07,078 Skipping link: not a file: https://www.piwheels.org/simple/soapy-st/
2025-01-08T10:00:07,079 Skipping link: not a file: https://pypi.org/simple/soapy-st/
2025-01-08T10:00:07,099 Given no hashes to check 1 links for project 'soapy-st': discarding no candidates
2025-01-08T10:00:07,101 Collecting soapy-st==0.1.8
2025-01-08T10:00:07,104   Created temporary directory: /tmp/pip-unpack-5vvauh7m
2025-01-08T10:00:07,251   Downloading SOAPy_st-0.1.8.tar.gz (218 kB)
2025-01-08T10:00:07,527   Added soapy-st==0.1.8 from https://files.pythonhosted.org/packages/45/7c/3466e5548b1b78fc48bc95a8c6494161eed6829b8b6c383290f08b8e7928/SOAPy_st-0.1.8.tar.gz to build tracker '/tmp/pip-build-tracker-q58ccy7t'
2025-01-08T10:00:07,529   Running setup.py (path:/tmp/pip-wheel-jee6k5bk/soapy-st_9e6c566cf2984aa29704fff57165e903/setup.py) egg_info for package soapy-st
2025-01-08T10:00:07,531   Created temporary directory: /tmp/pip-pip-egg-info-ogf2_qlb
2025-01-08T10:00:07,531   Preparing metadata (setup.py): started
2025-01-08T10:00:07,533   Running command python setup.py egg_info
2025-01-08T10:00:08,324   /usr/local/lib/python3.11/dist-packages/setuptools/config/expand.py:124: SetuptoolsWarning: File '/tmp/pip-wheel-jee6k5bk/soapy-st_9e6c566cf2984aa29704fff57165e903/Readme.md' cannot be found
2025-01-08T10:00:08,325     return '\n'.join(
2025-01-08T10:00:08,939   running egg_info
2025-01-08T10:00:08,967   creating /tmp/pip-pip-egg-info-ogf2_qlb/SOAPy_st.egg-info
2025-01-08T10:00:08,968   writing /tmp/pip-pip-egg-info-ogf2_qlb/SOAPy_st.egg-info/PKG-INFO
2025-01-08T10:00:08,971   writing dependency_links to /tmp/pip-pip-egg-info-ogf2_qlb/SOAPy_st.egg-info/dependency_links.txt
2025-01-08T10:00:08,974   writing requirements to /tmp/pip-pip-egg-info-ogf2_qlb/SOAPy_st.egg-info/requires.txt
2025-01-08T10:00:08,975   writing top-level names to /tmp/pip-pip-egg-info-ogf2_qlb/SOAPy_st.egg-info/top_level.txt
2025-01-08T10:00:08,977   writing manifest file '/tmp/pip-pip-egg-info-ogf2_qlb/SOAPy_st.egg-info/SOURCES.txt'
2025-01-08T10:00:09,076   reading manifest file '/tmp/pip-pip-egg-info-ogf2_qlb/SOAPy_st.egg-info/SOURCES.txt'
2025-01-08T10:00:09,078   reading manifest template 'MANIFEST.in'
2025-01-08T10:00:09,079   adding license file 'LICENSE.md'
2025-01-08T10:00:09,083   writing manifest file '/tmp/pip-pip-egg-info-ogf2_qlb/SOAPy_st.egg-info/SOURCES.txt'
2025-01-08T10:00:09,192   Preparing metadata (setup.py): finished with status 'done'
2025-01-08T10:00:09,197   Source in /tmp/pip-wheel-jee6k5bk/soapy-st_9e6c566cf2984aa29704fff57165e903 has version 0.1.8, which satisfies requirement soapy-st==0.1.8 from https://files.pythonhosted.org/packages/45/7c/3466e5548b1b78fc48bc95a8c6494161eed6829b8b6c383290f08b8e7928/SOAPy_st-0.1.8.tar.gz
2025-01-08T10:00:09,198   Removed soapy-st==0.1.8 from https://files.pythonhosted.org/packages/45/7c/3466e5548b1b78fc48bc95a8c6494161eed6829b8b6c383290f08b8e7928/SOAPy_st-0.1.8.tar.gz from build tracker '/tmp/pip-build-tracker-q58ccy7t'
2025-01-08T10:00:09,210 Created temporary directory: /tmp/pip-unpack-6ltr3vod
2025-01-08T10:00:09,211 Created temporary directory: /tmp/pip-unpack-l_r0ozh_
2025-01-08T10:00:09,212 Building wheels for collected packages: soapy-st
2025-01-08T10:00:09,216   Created temporary directory: /tmp/pip-wheel-hdxc28q5
2025-01-08T10:00:09,217   Building wheel for soapy-st (setup.py): started
2025-01-08T10:00:09,218   Destination directory: /tmp/pip-wheel-hdxc28q5
2025-01-08T10:00:09,218   Running command python setup.py bdist_wheel
2025-01-08T10:00:09,759   /usr/local/lib/python3.11/dist-packages/setuptools/config/expand.py:124: SetuptoolsWarning: File '/tmp/pip-wheel-jee6k5bk/soapy-st_9e6c566cf2984aa29704fff57165e903/Readme.md' cannot be found
2025-01-08T10:00:09,760     return '\n'.join(
2025-01-08T10:00:10,319   running bdist_wheel
2025-01-08T10:00:11,284   running build
2025-01-08T10:00:11,285   running build_py
2025-01-08T10:00:11,328   creating build/lib/SOAPy_st
2025-01-08T10:00:11,332   copying SOAPy_st/_compat.py -> build/lib/SOAPy_st
2025-01-08T10:00:11,335   copying SOAPy_st/utils.py -> build/lib/SOAPy_st
2025-01-08T10:00:11,339   copying SOAPy_st/_metadata.py -> build/lib/SOAPy_st
2025-01-08T10:00:11,342   copying SOAPy_st/__init__.py -> build/lib/SOAPy_st
2025-01-08T10:00:11,346   copying SOAPy_st/_docs.py -> build/lib/SOAPy_st
2025-01-08T10:00:11,348   copying SOAPy_st/_settings.py -> build/lib/SOAPy_st
2025-01-08T10:00:11,354   creating build/lib/SOAPy_st/pl
2025-01-08T10:00:11,355   copying SOAPy_st/pl/_color.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,358   copying SOAPy_st/pl/_show.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,362   copying SOAPy_st/pl/utils.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,365   copying SOAPy_st/pl/_heatmap.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,369   copying SOAPy_st/pl/__init__.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,371   copying SOAPy_st/pl/_niche.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,375   copying SOAPy_st/pl/_tendency.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,379   copying SOAPy_st/pl/_neighborhood.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,382   copying SOAPy_st/pl/_ccc.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,385   copying SOAPy_st/pl/_tensor.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,388   copying SOAPy_st/pl/_chord.py -> build/lib/SOAPy_st/pl
2025-01-08T10:00:11,392   creating build/lib/SOAPy_st/tl
2025-01-08T10:00:11,393   copying SOAPy_st/tl/utils.py -> build/lib/SOAPy_st/tl
2025-01-08T10:00:11,397   copying SOAPy_st/tl/_domain.py -> build/lib/SOAPy_st/tl
2025-01-08T10:00:11,400   copying SOAPy_st/tl/__init__.py -> build/lib/SOAPy_st/tl
2025-01-08T10:00:11,402   copying SOAPy_st/tl/_tendency.py -> build/lib/SOAPy_st/tl
2025-01-08T10:00:11,406   copying SOAPy_st/tl/_var_genes.py -> build/lib/SOAPy_st/tl
2025-01-08T10:00:11,409   copying SOAPy_st/tl/_mask.py -> build/lib/SOAPy_st/tl
2025-01-08T10:00:11,411   copying SOAPy_st/tl/_ccc.py -> build/lib/SOAPy_st/tl
2025-01-08T10:00:11,415   copying SOAPy_st/tl/_interaction.py -> build/lib/SOAPy_st/tl
2025-01-08T10:00:11,418   copying SOAPy_st/tl/_tensor.py -> build/lib/SOAPy_st/tl
2025-01-08T10:00:11,422   creating build/lib/SOAPy_st/pp
2025-01-08T10:00:11,423   copying SOAPy_st/pp/utils.py -> build/lib/SOAPy_st/pp
2025-01-08T10:00:11,426   copying SOAPy_st/pp/__init__.py -> build/lib/SOAPy_st/pp
2025-01-08T10:00:11,429   copying SOAPy_st/pp/all2adata.py -> build/lib/SOAPy_st/pp
2025-01-08T10:00:11,432   copying SOAPy_st/pp/build_network.py -> build/lib/SOAPy_st/pp
2025-01-08T10:00:11,435   creating build/lib/SOAPy_st/tl/other_package_without_pip
2025-01-08T10:00:11,437   copying SOAPy_st/tl/other_package_without_pip/__init__.py -> build/lib/SOAPy_st/tl/other_package_without_pip
2025-01-08T10:00:11,440   creating build/lib/SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,441   copying SOAPy_st/tl/other_package_without_pip/GraphST/preprocess.py -> build/lib/SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,444   copying SOAPy_st/tl/other_package_without_pip/GraphST/utils.py -> build/lib/SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,447   copying SOAPy_st/tl/other_package_without_pip/GraphST/__init__.py -> build/lib/SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,449   copying SOAPy_st/tl/other_package_without_pip/GraphST/model.py -> build/lib/SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,452   copying SOAPy_st/tl/other_package_without_pip/GraphST/GraphST.py -> build/lib/SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,456   creating build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,457   copying SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/gat_conv.py -> build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,460   copying SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/STAGATE.py -> build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,462   copying SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/utils.py -> build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,466   copying SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/__init__.py -> build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,468   copying SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/Train_STAGATE.py -> build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,472   creating build/lib/SOAPy_st/tl/other_package_without_pip/scanit
2025-01-08T10:00:11,474   copying SOAPy_st/tl/other_package_without_pip/scanit/__init__.py -> build/lib/SOAPy_st/tl/other_package_without_pip/scanit
2025-01-08T10:00:11,479   creating build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,481   copying SOAPy_st/tl/other_package_without_pip/scanit/_utils/__init__.py -> build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,483   copying SOAPy_st/tl/other_package_without_pip/scanit/_utils/_alpha.py -> build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,488   copying SOAPy_st/tl/other_package_without_pip/scanit/_utils/_dgi.py -> build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,491   copying SOAPy_st/tl/other_package_without_pip/scanit/_utils/_knn.py -> build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,493   copying SOAPy_st/tl/other_package_without_pip/scanit/_utils/_scale_estimation.py -> build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,497   copying SOAPy_st/tl/other_package_without_pip/scanit/_utils/_gae.py -> build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,499   creating build/lib/SOAPy_st/tl/other_package_without_pip/scanit/tools
2025-01-08T10:00:11,501   copying SOAPy_st/tl/other_package_without_pip/scanit/tools/_scanit_representation.py -> build/lib/SOAPy_st/tl/other_package_without_pip/scanit/tools
2025-01-08T10:00:11,505   copying SOAPy_st/tl/other_package_without_pip/scanit/tools/__init__.py -> build/lib/SOAPy_st/tl/other_package_without_pip/scanit/tools
2025-01-08T10:00:11,507   running egg_info
2025-01-08T10:00:11,539   writing SOAPy_st.egg-info/PKG-INFO
2025-01-08T10:00:11,543   writing dependency_links to SOAPy_st.egg-info/dependency_links.txt
2025-01-08T10:00:11,546   writing requirements to SOAPy_st.egg-info/requires.txt
2025-01-08T10:00:11,547   writing top-level names to SOAPy_st.egg-info/top_level.txt
2025-01-08T10:00:11,586   reading manifest file 'SOAPy_st.egg-info/SOURCES.txt'
2025-01-08T10:00:11,591   reading manifest template 'MANIFEST.in'
2025-01-08T10:00:11,592   adding license file 'LICENSE.md'
2025-01-08T10:00:11,597   writing manifest file 'SOAPy_st.egg-info/SOURCES.txt'
2025-01-08T10:00:11,600   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'SOAPy_st.tl.datasets' is absent from the `packages` configuration.
2025-01-08T10:00:11,600   !!

2025-01-08T10:00:11,601           ********************************************************************************
2025-01-08T10:00:11,601           ############################
2025-01-08T10:00:11,602           # Package would be ignored #
2025-01-08T10:00:11,603           ############################
2025-01-08T10:00:11,603           Python recognizes 'SOAPy_st.tl.datasets' as an importable package[^1],
2025-01-08T10:00:11,604           but it is absent from setuptools' `packages` configuration.

2025-01-08T10:00:11,605           This leads to an ambiguous overall configuration. If you want to distribute this
2025-01-08T10:00:11,606           package, please make sure that 'SOAPy_st.tl.datasets' is explicitly added
2025-01-08T10:00:11,606           to the `packages` configuration field.

2025-01-08T10:00:11,607           Alternatively, you can also rely on setuptools' discovery methods
2025-01-08T10:00:11,608           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-01-08T10:00:11,608           instead of `find_packages(...)`/`find:`).

2025-01-08T10:00:11,609           You can read more about "package discovery" on setuptools documentation page:

2025-01-08T10:00:11,610           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-01-08T10:00:11,612           If you don't want 'SOAPy_st.tl.datasets' to be distributed and are
2025-01-08T10:00:11,616           already explicitly excluding 'SOAPy_st.tl.datasets' via
2025-01-08T10:00:11,617           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-01-08T10:00:11,617           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-01-08T10:00:11,618           combination with a more fine grained `package-data` configuration.

2025-01-08T10:00:11,619           You can read more about "package data files" on setuptools documentation page:

2025-01-08T10:00:11,620           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-01-08T10:00:11,625           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-01-08T10:00:11,627                 even if it does not contain any `.py` files.
2025-01-08T10:00:11,628                 On the other hand, currently there is no concept of package data
2025-01-08T10:00:11,629                 directory, all directories are treated like packages.
2025-01-08T10:00:11,629           ********************************************************************************

2025-01-08T10:00:11,630   !!
2025-01-08T10:00:11,631     check.warn(importable)
2025-01-08T10:00:11,631   creating build/lib/SOAPy_st/tl/datasets
2025-01-08T10:00:11,632   copying SOAPy_st/tl/datasets/Human-2020-Jin-LR-pairs.csv -> build/lib/SOAPy_st/tl/datasets
2025-01-08T10:00:11,632   copying SOAPy_st/tl/datasets/Mouse-2020-Jin-LR-pairs.csv -> build/lib/SOAPy_st/tl/datasets
2025-01-08T10:00:11,664   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2025-01-08T10:00:11,665   !!

2025-01-08T10:00:11,666           ********************************************************************************
2025-01-08T10:00:11,666           Please avoid running ``setup.py`` directly.
2025-01-08T10:00:11,667           Instead, use pypa/build, pypa/installer or other
2025-01-08T10:00:11,667           standards-based tools.

2025-01-08T10:00:11,668           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2025-01-08T10:00:11,669           ********************************************************************************

2025-01-08T10:00:11,670   !!
2025-01-08T10:00:11,670     self.initialize_options()
2025-01-08T10:00:11,693   installing to build/bdist.linux-armv7l/wheel
2025-01-08T10:00:11,694   running install
2025-01-08T10:00:11,718   running install_lib
2025-01-08T10:00:11,746   creating build/bdist.linux-armv7l/wheel
2025-01-08T10:00:11,749   creating build/bdist.linux-armv7l/wheel/SOAPy_st
2025-01-08T10:00:11,750   copying build/lib/SOAPy_st/_compat.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st
2025-01-08T10:00:11,752   copying build/lib/SOAPy_st/utils.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st
2025-01-08T10:00:11,755   creating build/bdist.linux-armv7l/wheel/SOAPy_st/pl
2025-01-08T10:00:11,756   copying build/lib/SOAPy_st/pl/_color.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,758   copying build/lib/SOAPy_st/pl/_show.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,761   copying build/lib/SOAPy_st/pl/utils.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,763   copying build/lib/SOAPy_st/pl/_heatmap.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,765   copying build/lib/SOAPy_st/pl/__init__.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,767   copying build/lib/SOAPy_st/pl/_niche.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,770   copying build/lib/SOAPy_st/pl/_tendency.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,772   copying build/lib/SOAPy_st/pl/_neighborhood.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,774   copying build/lib/SOAPy_st/pl/_ccc.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,777   copying build/lib/SOAPy_st/pl/_tensor.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,780   copying build/lib/SOAPy_st/pl/_chord.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pl
2025-01-08T10:00:11,782   copying build/lib/SOAPy_st/_metadata.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st
2025-01-08T10:00:11,784   copying build/lib/SOAPy_st/__init__.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st
2025-01-08T10:00:11,786   creating build/bdist.linux-armv7l/wheel/SOAPy_st/tl
2025-01-08T10:00:11,788   copying build/lib/SOAPy_st/tl/utils.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl
2025-01-08T10:00:11,790   copying build/lib/SOAPy_st/tl/_domain.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl
2025-01-08T10:00:11,793   creating build/bdist.linux-armv7l/wheel/SOAPy_st/tl/datasets
2025-01-08T10:00:11,794   copying build/lib/SOAPy_st/tl/datasets/Human-2020-Jin-LR-pairs.csv -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/datasets
2025-01-08T10:00:11,804   copying build/lib/SOAPy_st/tl/datasets/Mouse-2020-Jin-LR-pairs.csv -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/datasets
2025-01-08T10:00:11,817   creating build/bdist.linux-armv7l/wheel/SOAPy_st/tl/other_package_without_pip
2025-01-08T10:00:11,819   creating build/bdist.linux-armv7l/wheel/SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,821   copying build/lib/SOAPy_st/tl/other_package_without_pip/GraphST/preprocess.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,823   copying build/lib/SOAPy_st/tl/other_package_without_pip/GraphST/utils.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,826   copying build/lib/SOAPy_st/tl/other_package_without_pip/GraphST/__init__.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,827   copying build/lib/SOAPy_st/tl/other_package_without_pip/GraphST/model.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,830   copying build/lib/SOAPy_st/tl/other_package_without_pip/GraphST/GraphST.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/GraphST
2025-01-08T10:00:11,832   copying build/lib/SOAPy_st/tl/other_package_without_pip/__init__.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip
2025-01-08T10:00:11,834   creating build/bdist.linux-armv7l/wheel/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,836   copying build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/gat_conv.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,839   copying build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/STAGATE.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,841   copying build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/utils.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,843   copying build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/__init__.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,845   copying build/lib/SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/Train_STAGATE.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/STAGATE_pyG
2025-01-08T10:00:11,847   creating build/bdist.linux-armv7l/wheel/SOAPy_st/tl/other_package_without_pip/scanit
2025-01-08T10:00:11,849   copying build/lib/SOAPy_st/tl/other_package_without_pip/scanit/__init__.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/scanit
2025-01-08T10:00:11,851   creating build/bdist.linux-armv7l/wheel/SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,852   copying build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils/__init__.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,854   copying build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils/_alpha.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,856   copying build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils/_dgi.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,858   copying build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils/_knn.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,860   copying build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils/_scale_estimation.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,862   copying build/lib/SOAPy_st/tl/other_package_without_pip/scanit/_utils/_gae.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/scanit/_utils
2025-01-08T10:00:11,865   creating build/bdist.linux-armv7l/wheel/SOAPy_st/tl/other_package_without_pip/scanit/tools
2025-01-08T10:00:11,866   copying build/lib/SOAPy_st/tl/other_package_without_pip/scanit/tools/_scanit_representation.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/scanit/tools
2025-01-08T10:00:11,869   copying build/lib/SOAPy_st/tl/other_package_without_pip/scanit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl/other_package_without_pip/scanit/tools
2025-01-08T10:00:11,871   copying build/lib/SOAPy_st/tl/__init__.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl
2025-01-08T10:00:11,873   copying build/lib/SOAPy_st/tl/_tendency.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl
2025-01-08T10:00:11,877   copying build/lib/SOAPy_st/tl/_var_genes.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl
2025-01-08T10:00:11,879   copying build/lib/SOAPy_st/tl/_mask.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl
2025-01-08T10:00:11,882   copying build/lib/SOAPy_st/tl/_ccc.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl
2025-01-08T10:00:11,885   copying build/lib/SOAPy_st/tl/_interaction.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl
2025-01-08T10:00:11,888   copying build/lib/SOAPy_st/tl/_tensor.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/tl
2025-01-08T10:00:11,890   copying build/lib/SOAPy_st/_docs.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st
2025-01-08T10:00:11,893   copying build/lib/SOAPy_st/_settings.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st
2025-01-08T10:00:11,896   creating build/bdist.linux-armv7l/wheel/SOAPy_st/pp
2025-01-08T10:00:11,897   copying build/lib/SOAPy_st/pp/utils.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pp
2025-01-08T10:00:11,899   copying build/lib/SOAPy_st/pp/__init__.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pp
2025-01-08T10:00:11,901   copying build/lib/SOAPy_st/pp/all2adata.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pp
2025-01-08T10:00:11,904   copying build/lib/SOAPy_st/pp/build_network.py -> build/bdist.linux-armv7l/wheel/./SOAPy_st/pp
2025-01-08T10:00:11,906   running install_egg_info
2025-01-08T10:00:11,941   Copying SOAPy_st.egg-info to build/bdist.linux-armv7l/wheel/./SOAPy_st-0.1.8-py3.11.egg-info
2025-01-08T10:00:11,951   running install_scripts
2025-01-08T10:00:11,974   creating build/bdist.linux-armv7l/wheel/SOAPy_st-0.1.8.dist-info/WHEEL
2025-01-08T10:00:11,977   creating '/tmp/pip-wheel-hdxc28q5/SOAPy_st-0.1.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-01-08T10:00:11,979   adding 'SOAPy_st/__init__.py'
2025-01-08T10:00:11,980   adding 'SOAPy_st/_compat.py'
2025-01-08T10:00:11,981   adding 'SOAPy_st/_docs.py'
2025-01-08T10:00:11,983   adding 'SOAPy_st/_metadata.py'
2025-01-08T10:00:11,985   adding 'SOAPy_st/_settings.py'
2025-01-08T10:00:11,987   adding 'SOAPy_st/utils.py'
2025-01-08T10:00:11,989   adding 'SOAPy_st/pl/__init__.py'
2025-01-08T10:00:11,993   adding 'SOAPy_st/pl/_ccc.py'
2025-01-08T10:00:11,995   adding 'SOAPy_st/pl/_chord.py'
2025-01-08T10:00:11,996   adding 'SOAPy_st/pl/_color.py'
2025-01-08T10:00:11,998   adding 'SOAPy_st/pl/_heatmap.py'
2025-01-08T10:00:12,000   adding 'SOAPy_st/pl/_neighborhood.py'
2025-01-08T10:00:12,002   adding 'SOAPy_st/pl/_niche.py'
2025-01-08T10:00:12,004   adding 'SOAPy_st/pl/_show.py'
2025-01-08T10:00:12,006   adding 'SOAPy_st/pl/_tendency.py'
2025-01-08T10:00:12,007   adding 'SOAPy_st/pl/_tensor.py'
2025-01-08T10:00:12,009   adding 'SOAPy_st/pl/utils.py'
2025-01-08T10:00:12,010   adding 'SOAPy_st/pp/__init__.py'
2025-01-08T10:00:12,013   adding 'SOAPy_st/pp/all2adata.py'
2025-01-08T10:00:12,015   adding 'SOAPy_st/pp/build_network.py'
2025-01-08T10:00:12,016   adding 'SOAPy_st/pp/utils.py'
2025-01-08T10:00:12,018   adding 'SOAPy_st/tl/__init__.py'
2025-01-08T10:00:12,022   adding 'SOAPy_st/tl/_ccc.py'
2025-01-08T10:00:12,025   adding 'SOAPy_st/tl/_domain.py'
2025-01-08T10:00:12,028   adding 'SOAPy_st/tl/_interaction.py'
2025-01-08T10:00:12,029   adding 'SOAPy_st/tl/_mask.py'
2025-01-08T10:00:12,034   adding 'SOAPy_st/tl/_tendency.py'
2025-01-08T10:00:12,036   adding 'SOAPy_st/tl/_tensor.py'
2025-01-08T10:00:12,038   adding 'SOAPy_st/tl/_var_genes.py'
2025-01-08T10:00:12,040   adding 'SOAPy_st/tl/utils.py'
2025-01-08T10:00:12,072   adding 'SOAPy_st/tl/datasets/Human-2020-Jin-LR-pairs.csv'
2025-01-08T10:00:12,123   adding 'SOAPy_st/tl/datasets/Mouse-2020-Jin-LR-pairs.csv'
2025-01-08T10:00:12,130   adding 'SOAPy_st/tl/other_package_without_pip/__init__.py'
2025-01-08T10:00:12,134   adding 'SOAPy_st/tl/other_package_without_pip/GraphST/GraphST.py'
2025-01-08T10:00:12,135   adding 'SOAPy_st/tl/other_package_without_pip/GraphST/__init__.py'
2025-01-08T10:00:12,138   adding 'SOAPy_st/tl/other_package_without_pip/GraphST/model.py'
2025-01-08T10:00:12,140   adding 'SOAPy_st/tl/other_package_without_pip/GraphST/preprocess.py'
2025-01-08T10:00:12,142   adding 'SOAPy_st/tl/other_package_without_pip/GraphST/utils.py'
2025-01-08T10:00:12,145   adding 'SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/STAGATE.py'
2025-01-08T10:00:12,147   adding 'SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/Train_STAGATE.py'
2025-01-08T10:00:12,149   adding 'SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/__init__.py'
2025-01-08T10:00:12,151   adding 'SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/gat_conv.py'
2025-01-08T10:00:12,154   adding 'SOAPy_st/tl/other_package_without_pip/STAGATE_pyG/utils.py'
2025-01-08T10:00:12,156   adding 'SOAPy_st/tl/other_package_without_pip/scanit/__init__.py'
2025-01-08T10:00:12,159   adding 'SOAPy_st/tl/other_package_without_pip/scanit/_utils/__init__.py'
2025-01-08T10:00:12,161   adding 'SOAPy_st/tl/other_package_without_pip/scanit/_utils/_alpha.py'
2025-01-08T10:00:12,163   adding 'SOAPy_st/tl/other_package_without_pip/scanit/_utils/_dgi.py'
2025-01-08T10:00:12,165   adding 'SOAPy_st/tl/other_package_without_pip/scanit/_utils/_gae.py'
2025-01-08T10:00:12,167   adding 'SOAPy_st/tl/other_package_without_pip/scanit/_utils/_knn.py'
2025-01-08T10:00:12,168   adding 'SOAPy_st/tl/other_package_without_pip/scanit/_utils/_scale_estimation.py'
2025-01-08T10:00:12,171   adding 'SOAPy_st/tl/other_package_without_pip/scanit/tools/__init__.py'
2025-01-08T10:00:12,173   adding 'SOAPy_st/tl/other_package_without_pip/scanit/tools/_scanit_representation.py'
2025-01-08T10:00:12,183   adding 'SOAPy_st-0.1.8.dist-info/LICENSE.md'
2025-01-08T10:00:12,185   adding 'SOAPy_st-0.1.8.dist-info/METADATA'
2025-01-08T10:00:12,186   adding 'SOAPy_st-0.1.8.dist-info/WHEEL'
2025-01-08T10:00:12,187   adding 'SOAPy_st-0.1.8.dist-info/top_level.txt'
2025-01-08T10:00:12,188   adding 'SOAPy_st-0.1.8.dist-info/RECORD'
2025-01-08T10:00:12,193   removing build/bdist.linux-armv7l/wheel
2025-01-08T10:00:12,323   Building wheel for soapy-st (setup.py): finished with status 'done'
2025-01-08T10:00:12,328   Created wheel for soapy-st: filename=SOAPy_st-0.1.8-py3-none-any.whl size=242919 sha256=c1fb983304577e31d63e54f65b05881f4550388b457dfec56875ecc4ca45e3ae
2025-01-08T10:00:12,329   Stored in directory: /tmp/pip-ephem-wheel-cache-ta9sb9c4/wheels/76/b1/b3/3d0f6e7ef5324543bd0d3d7964286d571f82c6357789880ec2
2025-01-08T10:00:12,342 Successfully built soapy-st
2025-01-08T10:00:12,353 Removed build tracker: '/tmp/pip-build-tracker-q58ccy7t'