2025-01-14T22:03:43,625 Created temporary directory: /tmp/pip-build-tracker-oa31ccp5 2025-01-14T22:03:43,627 Initialized build tracking at /tmp/pip-build-tracker-oa31ccp5 2025-01-14T22:03:43,627 Created build tracker: /tmp/pip-build-tracker-oa31ccp5 2025-01-14T22:03:43,628 Entered build tracker: /tmp/pip-build-tracker-oa31ccp5 2025-01-14T22:03:43,628 Created temporary directory: /tmp/pip-wheel-1wwpdjqg 2025-01-14T22:03:43,633 Created temporary directory: /tmp/pip-ephem-wheel-cache-9zbk0937 2025-01-14T22:03:43,676 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-01-14T22:03:43,678 2 location(s) to search for versions of modelcif: 2025-01-14T22:03:43,678 * https://pypi.org/simple/modelcif/ 2025-01-14T22:03:43,678 * https://www.piwheels.org/simple/modelcif/ 2025-01-14T22:03:43,679 Fetching project page and analyzing links: https://pypi.org/simple/modelcif/ 2025-01-14T22:03:43,680 Getting page https://pypi.org/simple/modelcif/ 2025-01-14T22:03:43,682 Found index url https://pypi.org/simple/ 2025-01-14T22:03:43,902 Fetched page https://pypi.org/simple/modelcif/ as application/vnd.pypi.simple.v1+json 2025-01-14T22:03:43,905 Found link https://files.pythonhosted.org/packages/86/a5/ca2f0f3d28f3b45e87d8e9865ebd9a049c51cff212f51b2dcd6909d35738/modelcif-0.1.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.1 2025-01-14T22:03:43,906 Found link https://files.pythonhosted.org/packages/c0/e4/41bb0130b42352675ae2190c3ac4ab34908e9e3f92b14c4551bcafc93564/modelcif-0.2.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.2 2025-01-14T22:03:43,907 Found link https://files.pythonhosted.org/packages/f4/05/3d5e25e1a99cc28e4460a895bbb57831c7107f5365a610d135fb581017ac/modelcif-0.3.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.3 2025-01-14T22:03:43,907 Found link https://files.pythonhosted.org/packages/d2/6f/c57d3c78010b217522695647886585df97053f625a4731221e60da5ca8ee/modelcif-0.4.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.4 2025-01-14T22:03:43,908 Found link https://files.pythonhosted.org/packages/b0/a6/6306671254961b83234c7796b5cb65e6fa1a60dda379e48d474984464842/modelcif-0.5.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.5 2025-01-14T22:03:43,909 Found link https://files.pythonhosted.org/packages/54/32/41d965a0d9eff134c58830ec90682fdb3b30ff59fcdf62a1ce5c51239a6e/modelcif-0.6.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.6 2025-01-14T22:03:43,909 Found link https://files.pythonhosted.org/packages/96/0f/60aa4379b16b5fc7062a7f05eede21feaab737cf14b753ec114d449ea887/modelcif-0.7.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.7 2025-01-14T22:03:43,910 Found link https://files.pythonhosted.org/packages/1d/50/9f731fabf3c6bf8a85b9555f395d12ad2eee45d88a8fecd332e4d85ea0a4/modelcif-0.8.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.8 2025-01-14T22:03:43,911 Found link https://files.pythonhosted.org/packages/5c/4b/b50a56ed6d2d335813809b27ae4ea9862415b62163c8c10459e7ce738490/modelcif-0.9.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.9 2025-01-14T22:03:43,912 Found link https://files.pythonhosted.org/packages/9b/4d/d9022a7bc5b68468d52c8ba30ea1b7aa541c0ec5af91244dbc0f4e888f6b/modelcif-1.0.tar.gz (from https://pypi.org/simple/modelcif/), version: 1.0 2025-01-14T22:03:43,913 Found link https://files.pythonhosted.org/packages/c7/58/f42d39b78ab2e6744dca79584acd59c3d2a767090b7328f3ebb886e61c56/modelcif-1.1.tar.gz (from https://pypi.org/simple/modelcif/), version: 1.1 2025-01-14T22:03:43,913 Found link https://files.pythonhosted.org/packages/25/e5/b1596a04070d7ac975534fef4e6e5f924a166b90558521f1912827906a87/modelcif-1.2.tar.gz (from https://pypi.org/simple/modelcif/), version: 1.2 2025-01-14T22:03:43,914 Found link https://files.pythonhosted.org/packages/27/93/4f35283bf681a90c9cb288902a1a3805c164c547308dc8a8914001a17dd9/modelcif-1.3.tar.gz (from https://pypi.org/simple/modelcif/), version: 1.3 2025-01-14T22:03:43,915 Fetching project page and analyzing links: https://www.piwheels.org/simple/modelcif/ 2025-01-14T22:03:43,916 Getting page https://www.piwheels.org/simple/modelcif/ 2025-01-14T22:03:43,917 Found index url https://www.piwheels.org/simple/ 2025-01-14T22:03:44,076 Fetched page https://www.piwheels.org/simple/modelcif/ as text/html 2025-01-14T22:03:44,080 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-1.2-py3-none-any.whl#sha256=147248aaf156da9dc0c64182d75bb16ae5d97676921c2e3f360f804bf3d2c2b8 (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,081 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-1.1-py3-none-any.whl#sha256=9357ab5c7d66b9a2444151cdf7d49a859b138f1e2ad44142321b0ac1b3d0342b (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,081 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-1.0-py3-none-any.whl#sha256=4782652706712e4ec8216ac169d5060b3cad34baa38a64dfb61bc8dd167bb973 (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,082 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.9-py3-none-any.whl#sha256=3db0d4df7570020db1d55ff08c97436acfe5d1db7fd778a257670a53f4dd9a1a (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,082 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.8-py3-none-any.whl#sha256=0411d65fded5464fba7e793c6a01057251bf3cda9782219f108c950ce4c2098a (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,083 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.7-py3-none-any.whl#sha256=07d83425989a8fc2ea50033649cf34ec26f301302a4fdab4852cced4449eb416 (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,083 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.6-py3-none-any.whl#sha256=801425688ac82395addadb3b309f8997c14e82f54a1d1f496709629a7cf0120f (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,084 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.5-py3-none-any.whl#sha256=8147a5f6f13bbbc25f264598c5b811918c46052a31cd8dc0f96d61a5c1a1f10e (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,084 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.4-py3-none-any.whl#sha256=6f0b768aea5f824a71925aafb9a24ada80a01e46d092fa10d716fc618d17f306 (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,085 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.3-py3-none-any.whl#sha256=29e9f2d6e46ceb2eb0db7184254c7f08855642868169dc34c42598c1854fe1f0 (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,085 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.2-py3-none-any.whl#sha256=e33a96339a2aac8c856cb699699a0b0085e5a55589fb463f0c369d974a8314ac (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,086 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.1-py3-none-any.whl#sha256=196dd0a0a4f66f3a926afb5bd2fee81d8e68eeb69a9e3c3daaeb388fad7d9467 (from https://www.piwheels.org/simple/modelcif/) 2025-01-14T22:03:44,087 Skipping link: not a file: https://www.piwheels.org/simple/modelcif/ 2025-01-14T22:03:44,087 Skipping link: not a file: https://pypi.org/simple/modelcif/ 2025-01-14T22:03:44,108 Given no hashes to check 1 links for project 'modelcif': discarding no candidates 2025-01-14T22:03:44,109 Collecting modelcif==1.3 2025-01-14T22:03:44,112 Created temporary directory: /tmp/pip-unpack-r5q5heuc 2025-01-14T22:03:44,330 Downloading modelcif-1.3.tar.gz (74 kB) 2025-01-14T22:03:44,474 Added modelcif==1.3 from https://files.pythonhosted.org/packages/27/93/4f35283bf681a90c9cb288902a1a3805c164c547308dc8a8914001a17dd9/modelcif-1.3.tar.gz to build tracker '/tmp/pip-build-tracker-oa31ccp5' 2025-01-14T22:03:44,476 Running setup.py (path:/tmp/pip-wheel-1wwpdjqg/modelcif_9c970b0123f44d43a50cc1c8c49f4022/setup.py) egg_info for package modelcif 2025-01-14T22:03:44,477 Created temporary directory: /tmp/pip-pip-egg-info-ufykba4a 2025-01-14T22:03:44,478 Preparing metadata (setup.py): started 2025-01-14T22:03:44,479 Running command python setup.py egg_info 2025-01-14T22:03:45,555 running egg_info 2025-01-14T22:03:45,582 creating /tmp/pip-pip-egg-info-ufykba4a/modelcif.egg-info 2025-01-14T22:03:45,583 writing /tmp/pip-pip-egg-info-ufykba4a/modelcif.egg-info/PKG-INFO 2025-01-14T22:03:45,587 writing dependency_links to /tmp/pip-pip-egg-info-ufykba4a/modelcif.egg-info/dependency_links.txt 2025-01-14T22:03:45,589 writing requirements to /tmp/pip-pip-egg-info-ufykba4a/modelcif.egg-info/requires.txt 2025-01-14T22:03:45,590 writing top-level names to /tmp/pip-pip-egg-info-ufykba4a/modelcif.egg-info/top_level.txt 2025-01-14T22:03:45,591 writing manifest file '/tmp/pip-pip-egg-info-ufykba4a/modelcif.egg-info/SOURCES.txt' 2025-01-14T22:03:45,679 reading manifest file '/tmp/pip-pip-egg-info-ufykba4a/modelcif.egg-info/SOURCES.txt' 2025-01-14T22:03:45,681 reading manifest template 'MANIFEST.in' 2025-01-14T22:03:45,683 adding license file 'LICENSE' 2025-01-14T22:03:45,687 writing manifest file '/tmp/pip-pip-egg-info-ufykba4a/modelcif.egg-info/SOURCES.txt' 2025-01-14T22:03:45,794 Preparing metadata (setup.py): finished with status 'done' 2025-01-14T22:03:45,798 Source in /tmp/pip-wheel-1wwpdjqg/modelcif_9c970b0123f44d43a50cc1c8c49f4022 has version 1.3, which satisfies requirement modelcif==1.3 from https://files.pythonhosted.org/packages/27/93/4f35283bf681a90c9cb288902a1a3805c164c547308dc8a8914001a17dd9/modelcif-1.3.tar.gz 2025-01-14T22:03:45,799 Removed modelcif==1.3 from https://files.pythonhosted.org/packages/27/93/4f35283bf681a90c9cb288902a1a3805c164c547308dc8a8914001a17dd9/modelcif-1.3.tar.gz from build tracker '/tmp/pip-build-tracker-oa31ccp5' 2025-01-14T22:03:45,804 Created temporary directory: /tmp/pip-unpack-70ius_j9 2025-01-14T22:03:45,805 Created temporary directory: /tmp/pip-unpack-s2u7ucv6 2025-01-14T22:03:45,806 Building wheels for collected packages: modelcif 2025-01-14T22:03:45,810 Created temporary directory: /tmp/pip-wheel-sx267v3o 2025-01-14T22:03:45,811 Building wheel for modelcif (setup.py): started 2025-01-14T22:03:45,812 Destination directory: /tmp/pip-wheel-sx267v3o 2025-01-14T22:03:45,813 Running command python setup.py bdist_wheel 2025-01-14T22:03:46,838 running bdist_wheel 2025-01-14T22:03:46,971 running build 2025-01-14T22:03:46,972 running build_py 2025-01-14T22:03:47,003 creating build/lib/modelcif 2025-01-14T22:03:47,006 copying modelcif/model.py -> build/lib/modelcif 2025-01-14T22:03:47,008 copying modelcif/test.py -> build/lib/modelcif 2025-01-14T22:03:47,010 copying modelcif/qa_metric.py -> build/lib/modelcif 2025-01-14T22:03:47,013 copying modelcif/data.py -> build/lib/modelcif 2025-01-14T22:03:47,014 copying modelcif/reference.py -> build/lib/modelcif 2025-01-14T22:03:47,017 copying modelcif/associated.py -> build/lib/modelcif 2025-01-14T22:03:47,019 copying modelcif/alignment.py -> build/lib/modelcif 2025-01-14T22:03:47,021 copying modelcif/descriptor.py -> build/lib/modelcif 2025-01-14T22:03:47,023 copying modelcif/dumper.py -> build/lib/modelcif 2025-01-14T22:03:47,026 copying modelcif/reader.py -> build/lib/modelcif 2025-01-14T22:03:47,030 copying modelcif/protocol.py -> build/lib/modelcif 2025-01-14T22:03:47,032 copying modelcif/__init__.py -> build/lib/modelcif 2025-01-14T22:03:47,035 creating build/lib/modelcif/util 2025-01-14T22:03:47,037 copying modelcif/util/__init__.py -> build/lib/modelcif/util 2025-01-14T22:03:47,039 copying modelcif/util/make_mmcif.py -> build/lib/modelcif/util 2025-01-14T22:03:47,071 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-01-14T22:03:47,072 !! 2025-01-14T22:03:47,073 ******************************************************************************** 2025-01-14T22:03:47,074 Please avoid running ``setup.py`` directly. 2025-01-14T22:03:47,074 Instead, use pypa/build, pypa/installer or other 2025-01-14T22:03:47,074 standards-based tools. 2025-01-14T22:03:47,075 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-01-14T22:03:47,076 ******************************************************************************** 2025-01-14T22:03:47,077 !! 2025-01-14T22:03:47,077 self.initialize_options() 2025-01-14T22:03:47,103 installing to build/bdist.linux-armv7l/wheel 2025-01-14T22:03:47,103 running install 2025-01-14T22:03:47,129 running install_lib 2025-01-14T22:03:47,157 creating build/bdist.linux-armv7l/wheel 2025-01-14T22:03:47,159 creating build/bdist.linux-armv7l/wheel/modelcif 2025-01-14T22:03:47,161 copying build/lib/modelcif/model.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,163 copying build/lib/modelcif/test.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,166 creating build/bdist.linux-armv7l/wheel/modelcif/util 2025-01-14T22:03:47,167 copying build/lib/modelcif/util/__init__.py -> build/bdist.linux-armv7l/wheel/./modelcif/util 2025-01-14T22:03:47,170 copying build/lib/modelcif/util/make_mmcif.py -> build/bdist.linux-armv7l/wheel/./modelcif/util 2025-01-14T22:03:47,172 copying build/lib/modelcif/qa_metric.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,174 copying build/lib/modelcif/data.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,176 copying build/lib/modelcif/reference.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,179 copying build/lib/modelcif/associated.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,181 copying build/lib/modelcif/alignment.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,183 copying build/lib/modelcif/descriptor.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,185 copying build/lib/modelcif/dumper.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,188 copying build/lib/modelcif/reader.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,191 copying build/lib/modelcif/protocol.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,193 copying build/lib/modelcif/__init__.py -> build/bdist.linux-armv7l/wheel/./modelcif 2025-01-14T22:03:47,196 running install_egg_info 2025-01-14T22:03:47,231 running egg_info 2025-01-14T22:03:47,260 writing modelcif.egg-info/PKG-INFO 2025-01-14T22:03:47,263 writing dependency_links to modelcif.egg-info/dependency_links.txt 2025-01-14T22:03:47,265 writing requirements to modelcif.egg-info/requires.txt 2025-01-14T22:03:47,266 writing top-level names to modelcif.egg-info/top_level.txt 2025-01-14T22:03:47,296 reading manifest file 'modelcif.egg-info/SOURCES.txt' 2025-01-14T22:03:47,300 reading manifest template 'MANIFEST.in' 2025-01-14T22:03:47,302 adding license file 'LICENSE' 2025-01-14T22:03:47,306 writing manifest file 'modelcif.egg-info/SOURCES.txt' 2025-01-14T22:03:47,307 Copying modelcif.egg-info to build/bdist.linux-armv7l/wheel/./modelcif-1.3-py3.11.egg-info 2025-01-14T22:03:47,316 running install_scripts 2025-01-14T22:03:47,328 creating build/bdist.linux-armv7l/wheel/modelcif-1.3.dist-info/WHEEL 2025-01-14T22:03:47,331 creating '/tmp/pip-wheel-sx267v3o/modelcif-1.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-01-14T22:03:47,336 adding 'modelcif/__init__.py' 2025-01-14T22:03:47,338 adding 'modelcif/alignment.py' 2025-01-14T22:03:47,340 adding 'modelcif/associated.py' 2025-01-14T22:03:47,341 adding 'modelcif/data.py' 2025-01-14T22:03:47,343 adding 'modelcif/descriptor.py' 2025-01-14T22:03:47,348 adding 'modelcif/dumper.py' 2025-01-14T22:03:47,350 adding 'modelcif/model.py' 2025-01-14T22:03:47,351 adding 'modelcif/protocol.py' 2025-01-14T22:03:47,353 adding 'modelcif/qa_metric.py' 2025-01-14T22:03:47,358 adding 'modelcif/reader.py' 2025-01-14T22:03:47,360 adding 'modelcif/reference.py' 2025-01-14T22:03:47,361 adding 'modelcif/test.py' 2025-01-14T22:03:47,363 adding 'modelcif/util/__init__.py' 2025-01-14T22:03:47,364 adding 'modelcif/util/make_mmcif.py' 2025-01-14T22:03:47,366 adding 'modelcif-1.3.dist-info/LICENSE' 2025-01-14T22:03:47,367 adding 'modelcif-1.3.dist-info/METADATA' 2025-01-14T22:03:47,368 adding 'modelcif-1.3.dist-info/WHEEL' 2025-01-14T22:03:47,369 adding 'modelcif-1.3.dist-info/top_level.txt' 2025-01-14T22:03:47,370 adding 'modelcif-1.3.dist-info/RECORD' 2025-01-14T22:03:47,372 removing build/bdist.linux-armv7l/wheel 2025-01-14T22:03:47,489 Building wheel for modelcif (setup.py): finished with status 'done' 2025-01-14T22:03:47,492 Created wheel for modelcif: filename=modelcif-1.3-py3-none-any.whl size=45377 sha256=ee84d959bab2f955c0fd09d3baefcc553aa01b02fb3050ea29064132cd6692f5 2025-01-14T22:03:47,493 Stored in directory: /tmp/pip-ephem-wheel-cache-9zbk0937/wheels/da/2d/9c/60066de3b70718f145bdc3f76abde5ebd1dfda8b3f289461ea 2025-01-14T22:03:47,506 Successfully built modelcif 2025-01-14T22:03:47,510 Removed build tracker: '/tmp/pip-build-tracker-oa31ccp5'