2025-01-20T06:49:31,339 Created temporary directory: /tmp/pip-build-tracker-lovttym7 2025-01-20T06:49:31,340 Initialized build tracking at /tmp/pip-build-tracker-lovttym7 2025-01-20T06:49:31,340 Created build tracker: /tmp/pip-build-tracker-lovttym7 2025-01-20T06:49:31,341 Entered build tracker: /tmp/pip-build-tracker-lovttym7 2025-01-20T06:49:31,342 Created temporary directory: /tmp/pip-wheel-koxxjqz6 2025-01-20T06:49:31,346 Created temporary directory: /tmp/pip-ephem-wheel-cache-k3_ltird 2025-01-20T06:49:31,389 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-01-20T06:49:31,392 2 location(s) to search for versions of ourotools: 2025-01-20T06:49:31,392 * https://pypi.org/simple/ourotools/ 2025-01-20T06:49:31,392 * https://www.piwheels.org/simple/ourotools/ 2025-01-20T06:49:31,393 Fetching project page and analyzing links: https://pypi.org/simple/ourotools/ 2025-01-20T06:49:31,394 Getting page https://pypi.org/simple/ourotools/ 2025-01-20T06:49:31,395 Found index url https://pypi.org/simple/ 2025-01-20T06:49:31,612 Fetched page https://pypi.org/simple/ourotools/ as application/vnd.pypi.simple.v1+json 2025-01-20T06:49:31,614 Skipping link: No binaries permitted for ourotools: https://files.pythonhosted.org/packages/de/a9/f2dc55ac61a2bc12db9a928a36ba05648a5a4831ce29acc07b7cbe07e380/ourotools-0.2.7-py3-none-any.whl (from https://pypi.org/simple/ourotools/) (requires-python:<4,>=3.11) 2025-01-20T06:49:31,615 Found link https://files.pythonhosted.org/packages/5b/eb/30e5bdb9676142bfc7cb38f9ef1248a5e95b5452cc00d05e028754574958/ourotools-0.2.7.tar.gz (from https://pypi.org/simple/ourotools/) (requires-python:<4,>=3.11), version: 0.2.7 2025-01-20T06:49:31,615 Skipping link: No binaries permitted for ourotools: https://files.pythonhosted.org/packages/e9/75/60ab16fb2bef382ffeb794acde57ac3a2db7cd33c143506364828cea3e6e/ourotools-0.2.8-py3-none-any.whl (from https://pypi.org/simple/ourotools/) (requires-python:>=3.11) 2025-01-20T06:49:31,616 Found link https://files.pythonhosted.org/packages/23/45/18706a4a1fa6165c6a6126153671a1d4f0721e87abee26669822900bcf01/ourotools-0.2.8.tar.gz (from https://pypi.org/simple/ourotools/) (requires-python:>=3.11), version: 0.2.8 2025-01-20T06:49:31,617 Fetching project page and analyzing links: https://www.piwheels.org/simple/ourotools/ 2025-01-20T06:49:31,618 Getting page https://www.piwheels.org/simple/ourotools/ 2025-01-20T06:49:31,620 Found index url https://www.piwheels.org/simple/ 2025-01-20T06:49:31,792 Fetched page https://www.piwheels.org/simple/ourotools/ as text/html 2025-01-20T06:49:31,794 Skipping link: No binaries permitted for ourotools: https://www.piwheels.org/simple/ourotools/ourotools-0.2.7-py3-none-any.whl#sha256=2dfdf7323f394035d4f5179c2f40855b815c8eaaae1acb499f4ce51248609931 (from https://www.piwheels.org/simple/ourotools/) (requires-python:>=3.11, <4) 2025-01-20T06:49:31,794 Skipping link: not a file: https://www.piwheels.org/simple/ourotools/ 2025-01-20T06:49:31,795 Skipping link: not a file: https://pypi.org/simple/ourotools/ 2025-01-20T06:49:31,816 Given no hashes to check 1 links for project 'ourotools': discarding no candidates 2025-01-20T06:49:31,818 Collecting ourotools==0.2.8 2025-01-20T06:49:31,820 Created temporary directory: /tmp/pip-unpack-__teo3z4 2025-01-20T06:49:32,155 Downloading ourotools-0.2.8.tar.gz (233 kB) 2025-01-20T06:49:32,316 Added ourotools==0.2.8 from https://files.pythonhosted.org/packages/23/45/18706a4a1fa6165c6a6126153671a1d4f0721e87abee26669822900bcf01/ourotools-0.2.8.tar.gz to build tracker '/tmp/pip-build-tracker-lovttym7' 2025-01-20T06:49:32,318 Running setup.py (path:/tmp/pip-wheel-koxxjqz6/ourotools_6cb769b463004e799889c8743def1750/setup.py) egg_info for package ourotools 2025-01-20T06:49:32,319 Created temporary directory: /tmp/pip-pip-egg-info-gpnxu89p 2025-01-20T06:49:32,319 Preparing metadata (setup.py): started 2025-01-20T06:49:32,321 Running command python setup.py egg_info 2025-01-20T06:49:33,360 running egg_info 2025-01-20T06:49:33,388 creating /tmp/pip-pip-egg-info-gpnxu89p/ourotools.egg-info 2025-01-20T06:49:33,389 writing /tmp/pip-pip-egg-info-gpnxu89p/ourotools.egg-info/PKG-INFO 2025-01-20T06:49:33,394 writing dependency_links to /tmp/pip-pip-egg-info-gpnxu89p/ourotools.egg-info/dependency_links.txt 2025-01-20T06:49:33,395 writing entry points to /tmp/pip-pip-egg-info-gpnxu89p/ourotools.egg-info/entry_points.txt 2025-01-20T06:49:33,397 writing requirements to /tmp/pip-pip-egg-info-gpnxu89p/ourotools.egg-info/requires.txt 2025-01-20T06:49:33,398 writing top-level names to /tmp/pip-pip-egg-info-gpnxu89p/ourotools.egg-info/top_level.txt 2025-01-20T06:49:33,399 writing manifest file '/tmp/pip-pip-egg-info-gpnxu89p/ourotools.egg-info/SOURCES.txt' 2025-01-20T06:49:33,485 reading manifest file '/tmp/pip-pip-egg-info-gpnxu89p/ourotools.egg-info/SOURCES.txt' 2025-01-20T06:49:33,487 reading manifest template 'MANIFEST.in' 2025-01-20T06:49:33,487 adding license file 'LICENSE' 2025-01-20T06:49:33,490 writing manifest file '/tmp/pip-pip-egg-info-gpnxu89p/ourotools.egg-info/SOURCES.txt' 2025-01-20T06:49:33,599 Preparing metadata (setup.py): finished with status 'done' 2025-01-20T06:49:33,606 Source in /tmp/pip-wheel-koxxjqz6/ourotools_6cb769b463004e799889c8743def1750 has version 0.2.8, which satisfies requirement ourotools==0.2.8 from https://files.pythonhosted.org/packages/23/45/18706a4a1fa6165c6a6126153671a1d4f0721e87abee26669822900bcf01/ourotools-0.2.8.tar.gz 2025-01-20T06:49:33,607 Removed ourotools==0.2.8 from https://files.pythonhosted.org/packages/23/45/18706a4a1fa6165c6a6126153671a1d4f0721e87abee26669822900bcf01/ourotools-0.2.8.tar.gz from build tracker '/tmp/pip-build-tracker-lovttym7' 2025-01-20T06:49:33,618 Created temporary directory: /tmp/pip-unpack-e9weq0s2 2025-01-20T06:49:33,619 Created temporary directory: /tmp/pip-unpack-bpljib1o 2025-01-20T06:49:33,620 Building wheels for collected packages: ourotools 2025-01-20T06:49:33,624 Created temporary directory: /tmp/pip-wheel-2p37au46 2025-01-20T06:49:33,624 Building wheel for ourotools (setup.py): started 2025-01-20T06:49:33,626 Destination directory: /tmp/pip-wheel-2p37au46 2025-01-20T06:49:33,626 Running command python setup.py bdist_wheel 2025-01-20T06:49:34,644 running bdist_wheel 2025-01-20T06:49:34,773 running build 2025-01-20T06:49:34,774 running build_py 2025-01-20T06:49:34,810 creating build/lib/ourotools 2025-01-20T06:49:34,812 copying ourotools/__init__.py -> build/lib/ourotools 2025-01-20T06:49:34,814 copying ourotools/__main__.py -> build/lib/ourotools 2025-01-20T06:49:34,816 creating build/lib/ourotools/core 2025-01-20T06:49:34,817 copying ourotools/core/OT.py -> build/lib/ourotools/core 2025-01-20T06:49:34,820 copying ourotools/core/SAM.py -> build/lib/ourotools/core 2025-01-20T06:49:34,822 copying ourotools/core/__init__.py -> build/lib/ourotools/core 2025-01-20T06:49:34,824 copying ourotools/core/BA.py -> build/lib/ourotools/core 2025-01-20T06:49:34,826 copying ourotools/core/SEQ.py -> build/lib/ourotools/core 2025-01-20T06:49:34,828 copying ourotools/core/MAP.py -> build/lib/ourotools/core 2025-01-20T06:49:34,830 copying ourotools/core/STR.py -> build/lib/ourotools/core 2025-01-20T06:49:34,832 copying ourotools/core/alternative_splicing_analysis.py -> build/lib/ourotools/core 2025-01-20T06:49:34,836 copying ourotools/core/ONT.py -> build/lib/ourotools/core 2025-01-20T06:49:34,838 copying ourotools/core/core.py -> build/lib/ourotools/core 2025-01-20T06:49:34,852 copying ourotools/core/SC.py -> build/lib/ourotools/core 2025-01-20T06:49:34,855 copying ourotools/core/biobookshelf.py -> build/lib/ourotools/core 2025-01-20T06:49:34,859 running egg_info 2025-01-20T06:49:34,889 writing ourotools.egg-info/PKG-INFO 2025-01-20T06:49:34,893 writing dependency_links to ourotools.egg-info/dependency_links.txt 2025-01-20T06:49:34,895 writing entry points to ourotools.egg-info/entry_points.txt 2025-01-20T06:49:34,896 writing requirements to ourotools.egg-info/requires.txt 2025-01-20T06:49:34,898 writing top-level names to ourotools.egg-info/top_level.txt 2025-01-20T06:49:34,928 reading manifest file 'ourotools.egg-info/SOURCES.txt' 2025-01-20T06:49:34,931 reading manifest template 'MANIFEST.in' 2025-01-20T06:49:34,932 adding license file 'LICENSE' 2025-01-20T06:49:34,934 writing manifest file 'ourotools.egg-info/SOURCES.txt' 2025-01-20T06:49:34,964 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-01-20T06:49:34,965 !! 2025-01-20T06:49:34,966 ******************************************************************************** 2025-01-20T06:49:34,966 Please avoid running ``setup.py`` directly. 2025-01-20T06:49:34,966 Instead, use pypa/build, pypa/installer or other 2025-01-20T06:49:34,967 standards-based tools. 2025-01-20T06:49:34,968 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-01-20T06:49:34,968 ******************************************************************************** 2025-01-20T06:49:34,969 !! 2025-01-20T06:49:34,970 self.initialize_options() 2025-01-20T06:49:34,992 installing to build/bdist.linux-armv7l/wheel 2025-01-20T06:49:34,993 running install 2025-01-20T06:49:35,018 running install_lib 2025-01-20T06:49:35,044 creating build/bdist.linux-armv7l/wheel 2025-01-20T06:49:35,047 creating build/bdist.linux-armv7l/wheel/ourotools 2025-01-20T06:49:35,048 creating build/bdist.linux-armv7l/wheel/ourotools/core 2025-01-20T06:49:35,050 copying build/lib/ourotools/core/OT.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,052 copying build/lib/ourotools/core/SAM.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,055 copying build/lib/ourotools/core/__init__.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,056 copying build/lib/ourotools/core/BA.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,059 copying build/lib/ourotools/core/SEQ.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,061 copying build/lib/ourotools/core/MAP.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,062 copying build/lib/ourotools/core/STR.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,065 copying build/lib/ourotools/core/alternative_splicing_analysis.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,068 copying build/lib/ourotools/core/ONT.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,070 copying build/lib/ourotools/core/core.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,084 copying build/lib/ourotools/core/SC.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,087 copying build/lib/ourotools/core/biobookshelf.py -> build/bdist.linux-armv7l/wheel/./ourotools/core 2025-01-20T06:49:35,092 copying build/lib/ourotools/__init__.py -> build/bdist.linux-armv7l/wheel/./ourotools 2025-01-20T06:49:35,094 copying build/lib/ourotools/__main__.py -> build/bdist.linux-armv7l/wheel/./ourotools 2025-01-20T06:49:35,096 running install_egg_info 2025-01-20T06:49:35,130 Copying ourotools.egg-info to build/bdist.linux-armv7l/wheel/./ourotools-0.2.8-py3.11.egg-info 2025-01-20T06:49:35,142 running install_scripts 2025-01-20T06:49:35,164 creating build/bdist.linux-armv7l/wheel/ourotools-0.2.8.dist-info/WHEEL 2025-01-20T06:49:35,167 creating '/tmp/pip-wheel-2p37au46/ourotools-0.2.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-01-20T06:49:35,170 adding 'ourotools/__init__.py' 2025-01-20T06:49:35,171 adding 'ourotools/__main__.py' 2025-01-20T06:49:35,174 adding 'ourotools/core/BA.py' 2025-01-20T06:49:35,176 adding 'ourotools/core/MAP.py' 2025-01-20T06:49:35,178 adding 'ourotools/core/ONT.py' 2025-01-20T06:49:35,180 adding 'ourotools/core/OT.py' 2025-01-20T06:49:35,183 adding 'ourotools/core/SAM.py' 2025-01-20T06:49:35,187 adding 'ourotools/core/SC.py' 2025-01-20T06:49:35,190 adding 'ourotools/core/SEQ.py' 2025-01-20T06:49:35,192 adding 'ourotools/core/STR.py' 2025-01-20T06:49:35,194 adding 'ourotools/core/__init__.py' 2025-01-20T06:49:35,200 adding 'ourotools/core/alternative_splicing_analysis.py' 2025-01-20T06:49:35,215 adding 'ourotools/core/biobookshelf.py' 2025-01-20T06:49:35,296 adding 'ourotools/core/core.py' 2025-01-20T06:49:35,303 adding 'ourotools-0.2.8.dist-info/LICENSE' 2025-01-20T06:49:35,307 adding 'ourotools-0.2.8.dist-info/METADATA' 2025-01-20T06:49:35,308 adding 'ourotools-0.2.8.dist-info/WHEEL' 2025-01-20T06:49:35,308 adding 'ourotools-0.2.8.dist-info/entry_points.txt' 2025-01-20T06:49:35,310 adding 'ourotools-0.2.8.dist-info/top_level.txt' 2025-01-20T06:49:35,310 adding 'ourotools-0.2.8.dist-info/RECORD' 2025-01-20T06:49:35,314 removing build/bdist.linux-armv7l/wheel 2025-01-20T06:49:35,433 Building wheel for ourotools (setup.py): finished with status 'done' 2025-01-20T06:49:35,438 Created wheel for ourotools: filename=ourotools-0.2.8-py3-none-any.whl size=223782 sha256=cda2d4cd69842180aee49b334bda89875d563c5e5fb13a8b9920f7be665e71cc 2025-01-20T06:49:35,439 Stored in directory: /tmp/pip-ephem-wheel-cache-k3_ltird/wheels/95/ea/4d/9c4b905a5202c1845d468a765f4bd9ff27c927ff59978f4cb8 2025-01-20T06:49:35,454 Successfully built ourotools 2025-01-20T06:49:35,466 Removed build tracker: '/tmp/pip-build-tracker-lovttym7'