2025-01-28T20:06:13,286 Created temporary directory: /tmp/pip-build-tracker-1e_6rtba 2025-01-28T20:06:13,288 Initialized build tracking at /tmp/pip-build-tracker-1e_6rtba 2025-01-28T20:06:13,288 Created build tracker: /tmp/pip-build-tracker-1e_6rtba 2025-01-28T20:06:13,289 Entered build tracker: /tmp/pip-build-tracker-1e_6rtba 2025-01-28T20:06:13,289 Created temporary directory: /tmp/pip-wheel-mkz71u61 2025-01-28T20:06:13,293 Created temporary directory: /tmp/pip-ephem-wheel-cache-4x6pcp1w 2025-01-28T20:06:13,337 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-01-28T20:06:13,340 2 location(s) to search for versions of plasmid-assessor: 2025-01-28T20:06:13,340 * https://pypi.org/simple/plasmid-assessor/ 2025-01-28T20:06:13,340 * https://www.piwheels.org/simple/plasmid-assessor/ 2025-01-28T20:06:13,341 Fetching project page and analyzing links: https://pypi.org/simple/plasmid-assessor/ 2025-01-28T20:06:13,341 Getting page https://pypi.org/simple/plasmid-assessor/ 2025-01-28T20:06:13,343 Found index url https://pypi.org/simple/ 2025-01-28T20:06:13,572 Fetched page https://pypi.org/simple/plasmid-assessor/ as application/vnd.pypi.simple.v1+json 2025-01-28T20:06:13,574 Skipping link: No binaries permitted for plasmid-assessor: https://files.pythonhosted.org/packages/97/81/7de93c96c69b2a8306be59cec61959c282e5fc8e677874f81bf00e469c98/plasmid_assessor-0.1.0-py3-none-any.whl (from https://pypi.org/simple/plasmid-assessor/) 2025-01-28T20:06:13,574 Found link https://files.pythonhosted.org/packages/4c/67/fe779ba6f0afd2190a89580b9f9d59a12e57f0fd543528ff0e4ebaa2e9ba/plasmid_assessor-0.1.0.tar.gz (from https://pypi.org/simple/plasmid-assessor/), version: 0.1.0 2025-01-28T20:06:13,575 Skipping link: No binaries permitted for plasmid-assessor: https://files.pythonhosted.org/packages/af/d9/54837a5f99de9f393e173620964b4d8270f823ed22775352f4f03ac2c82f/plasmid_assessor-0.2.0-py3-none-any.whl (from https://pypi.org/simple/plasmid-assessor/) 2025-01-28T20:06:13,576 Found link https://files.pythonhosted.org/packages/c8/f1/6ab630870c752de7e96467bfee57bc7d3817d6dbe6d1a807a642078c435e/plasmid_assessor-0.2.0.tar.gz (from https://pypi.org/simple/plasmid-assessor/), version: 0.2.0 2025-01-28T20:06:13,577 Fetching project page and analyzing links: https://www.piwheels.org/simple/plasmid-assessor/ 2025-01-28T20:06:13,577 Getting page https://www.piwheels.org/simple/plasmid-assessor/ 2025-01-28T20:06:13,579 Found index url https://www.piwheels.org/simple/ 2025-01-28T20:06:13,744 Fetched page https://www.piwheels.org/simple/plasmid-assessor/ as text/html 2025-01-28T20:06:13,746 Skipping link: not a file: https://www.piwheels.org/simple/plasmid-assessor/ 2025-01-28T20:06:13,747 Skipping link: not a file: https://pypi.org/simple/plasmid-assessor/ 2025-01-28T20:06:13,769 Given no hashes to check 1 links for project 'plasmid-assessor': discarding no candidates 2025-01-28T20:06:13,772 Collecting plasmid-assessor==0.2.0 2025-01-28T20:06:13,774 Created temporary directory: /tmp/pip-unpack-iry26pvl 2025-01-28T20:06:13,993 Downloading plasmid_assessor-0.2.0.tar.gz (36 kB) 2025-01-28T20:06:14,070 Added plasmid-assessor==0.2.0 from https://files.pythonhosted.org/packages/c8/f1/6ab630870c752de7e96467bfee57bc7d3817d6dbe6d1a807a642078c435e/plasmid_assessor-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-1e_6rtba' 2025-01-28T20:06:14,072 Running setup.py (path:/tmp/pip-wheel-mkz71u61/plasmid-assessor_25550bfb4aeb484ca32cad2cca47487c/setup.py) egg_info for package plasmid-assessor 2025-01-28T20:06:14,073 Created temporary directory: /tmp/pip-pip-egg-info-lw4mjay5 2025-01-28T20:06:14,073 Preparing metadata (setup.py): started 2025-01-28T20:06:14,075 Running command python setup.py egg_info 2025-01-28T20:06:14,577 Traceback (most recent call last): 2025-01-28T20:06:14,577 File "", line 2, in 2025-01-28T20:06:14,578 File "", line 34, in 2025-01-28T20:06:14,579 File "/tmp/pip-wheel-mkz71u61/plasmid-assessor_25550bfb4aeb484ca32cad2cca47487c/setup.py", line 13, in 2025-01-28T20:06:14,580 long_description=open("pypi-readme.rst").read(), 2025-01-28T20:06:14,581 ^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,582 FileNotFoundError: [Errno 2] No such file or directory: 'pypi-readme.rst' 2025-01-28T20:06:14,643 ERROR: python setup.py egg_info exited with 1 2025-01-28T20:06:14,656 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-01-28T20:06:14,656 exec(compile('"'"''"'"''"'"' 2025-01-28T20:06:14,656 # This is -- a caller that pip uses to run setup.py 2025-01-28T20:06:14,656 # 2025-01-28T20:06:14,656 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-01-28T20:06:14,656 # import from `distutils.core` to work with newer packaging standards. 2025-01-28T20:06:14,656 # - It provides a clear error message when setuptools is not installed. 2025-01-28T20:06:14,656 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-01-28T20:06:14,656 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-01-28T20:06:14,656 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-01-28T20:06:14,656 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-01-28T20:06:14,656 import os, sys, tokenize 2025-01-28T20:06:14,656 2025-01-28T20:06:14,656 try: 2025-01-28T20:06:14,656 import setuptools 2025-01-28T20:06:14,656 except ImportError as error: 2025-01-28T20:06:14,656 print( 2025-01-28T20:06:14,656 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2025-01-28T20:06:14,656 "the build environment.", 2025-01-28T20:06:14,656 file=sys.stderr, 2025-01-28T20:06:14,656 ) 2025-01-28T20:06:14,656 sys.exit(1) 2025-01-28T20:06:14,656 2025-01-28T20:06:14,656 __file__ = %r 2025-01-28T20:06:14,656 sys.argv[0] = __file__ 2025-01-28T20:06:14,656 2025-01-28T20:06:14,656 if os.path.exists(__file__): 2025-01-28T20:06:14,656 filename = __file__ 2025-01-28T20:06:14,656 with tokenize.open(__file__) as f: 2025-01-28T20:06:14,656 setup_py_code = f.read() 2025-01-28T20:06:14,656 else: 2025-01-28T20:06:14,656 filename = "" 2025-01-28T20:06:14,656 setup_py_code = "from setuptools import setup; setup()" 2025-01-28T20:06:14,656 2025-01-28T20:06:14,656 exec(compile(setup_py_code, filename, "exec")) 2025-01-28T20:06:14,656 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-mkz71u61/plasmid-assessor_25550bfb4aeb484ca32cad2cca47487c/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-lw4mjay5[/] 2025-01-28T20:06:14,657 [bold magenta]cwd[/]: /tmp/pip-wheel-mkz71u61/plasmid-assessor_25550bfb4aeb484ca32cad2cca47487c/ 2025-01-28T20:06:14,657 Preparing metadata (setup.py): finished with status 'error' 2025-01-28T20:06:14,659 ERROR: metadata generation failed 2025-01-28T20:06:14,664 Exception information: 2025-01-28T20:06:14,664 Traceback (most recent call last): 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata 2025-01-28T20:06:14,664 call_subprocess( 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-01-28T20:06:14,664 raise error 2025-01-28T20:06:14,664 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-01-28T20:06:14,664 2025-01-28T20:06:14,664 The above exception was the direct cause of the following exception: 2025-01-28T20:06:14,664 2025-01-28T20:06:14,664 Traceback (most recent call last): 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-01-28T20:06:14,664 status = _inner_run() 2025-01-28T20:06:14,664 ^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-01-28T20:06:14,664 return self.run(options, args) 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 67, in wrapper 2025-01-28T20:06:14,664 return func(self, options, args) 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-01-28T20:06:14,664 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 95, in resolve 2025-01-28T20:06:14,664 result = self._result = resolver.resolve( 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve 2025-01-28T20:06:14,664 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve 2025-01-28T20:06:14,664 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2025-01-28T20:06:14,664 if not criterion.candidates: 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__ 2025-01-28T20:06:14,664 return bool(self._sequence) 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 174, in __bool__ 2025-01-28T20:06:14,664 return any(self) 2025-01-28T20:06:14,664 ^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 162, in 2025-01-28T20:06:14,664 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 53, in _iter_built 2025-01-28T20:06:14,664 candidate = func() 2025-01-28T20:06:14,664 ^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-01-28T20:06:14,664 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-01-28T20:06:14,664 self._link_candidate_cache[link] = LinkCandidate( 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in __init__ 2025-01-28T20:06:14,664 super().__init__( 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-01-28T20:06:14,664 self.dist = self._prepare() 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-01-28T20:06:14,664 dist = self._prepare_distribution() 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 315, in _prepare_distribution 2025-01-28T20:06:14,664 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 527, in prepare_linked_requirement 2025-01-28T20:06:14,664 return self._prepare_linked_requirement(req, parallel_builds) 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 642, in _prepare_linked_requirement 2025-01-28T20:06:14,664 dist = _get_prepared_distribution( 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 72, in _get_prepared_distribution 2025-01-28T20:06:14,664 abstract_dist.prepare_distribution_metadata( 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-01-28T20:06:14,664 self.req.prepare_metadata() 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-01-28T20:06:14,664 self.metadata_directory = generate_metadata_legacy( 2025-01-28T20:06:14,664 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-01-28T20:06:14,664 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata 2025-01-28T20:06:14,664 raise MetadataGenerationFailed(package_details=details) from error 2025-01-28T20:06:14,664 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-01-28T20:06:14,677 Removed plasmid-assessor==0.2.0 from https://files.pythonhosted.org/packages/c8/f1/6ab630870c752de7e96467bfee57bc7d3817d6dbe6d1a807a642078c435e/plasmid_assessor-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-1e_6rtba' 2025-01-28T20:06:14,678 Removed build tracker: '/tmp/pip-build-tracker-1e_6rtba'