2025-01-28T21:11:29,996 Disabling truststore because Python version isn't 3.10+
2025-01-28T21:11:30,474 Created temporary directory: /tmp/pip-build-tracker-k87w1cmn
2025-01-28T21:11:30,475 Initialized build tracking at /tmp/pip-build-tracker-k87w1cmn
2025-01-28T21:11:30,475 Created build tracker: /tmp/pip-build-tracker-k87w1cmn
2025-01-28T21:11:30,475 Entered build tracker: /tmp/pip-build-tracker-k87w1cmn
2025-01-28T21:11:30,476 Created temporary directory: /tmp/pip-wheel-dcukmvgv
2025-01-28T21:11:30,482 Created temporary directory: /tmp/pip-ephem-wheel-cache-7ppw43xt
2025-01-28T21:11:30,527 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-01-28T21:11:30,530 2 location(s) to search for versions of plasmid-assessor:
2025-01-28T21:11:30,530 * https://pypi.org/simple/plasmid-assessor/
2025-01-28T21:11:30,530 * https://www.piwheels.org/simple/plasmid-assessor/
2025-01-28T21:11:30,530 Fetching project page and analyzing links: https://pypi.org/simple/plasmid-assessor/
2025-01-28T21:11:30,531 Getting page https://pypi.org/simple/plasmid-assessor/
2025-01-28T21:11:30,532 Found index url https://pypi.org/simple/
2025-01-28T21:11:30,580 Fetched page https://pypi.org/simple/plasmid-assessor/ as application/vnd.pypi.simple.v1+json
2025-01-28T21:11:30,582   Skipping link: No binaries permitted for plasmid-assessor: https://files.pythonhosted.org/packages/97/81/7de93c96c69b2a8306be59cec61959c282e5fc8e677874f81bf00e469c98/plasmid_assessor-0.1.0-py3-none-any.whl (from https://pypi.org/simple/plasmid-assessor/)
2025-01-28T21:11:30,582   Found link https://files.pythonhosted.org/packages/4c/67/fe779ba6f0afd2190a89580b9f9d59a12e57f0fd543528ff0e4ebaa2e9ba/plasmid_assessor-0.1.0.tar.gz (from https://pypi.org/simple/plasmid-assessor/), version: 0.1.0
2025-01-28T21:11:30,582   Skipping link: No binaries permitted for plasmid-assessor: https://files.pythonhosted.org/packages/af/d9/54837a5f99de9f393e173620964b4d8270f823ed22775352f4f03ac2c82f/plasmid_assessor-0.2.0-py3-none-any.whl (from https://pypi.org/simple/plasmid-assessor/)
2025-01-28T21:11:30,582   Found link https://files.pythonhosted.org/packages/c8/f1/6ab630870c752de7e96467bfee57bc7d3817d6dbe6d1a807a642078c435e/plasmid_assessor-0.2.0.tar.gz (from https://pypi.org/simple/plasmid-assessor/), version: 0.2.0
2025-01-28T21:11:30,583 Fetching project page and analyzing links: https://www.piwheels.org/simple/plasmid-assessor/
2025-01-28T21:11:30,583 Getting page https://www.piwheels.org/simple/plasmid-assessor/
2025-01-28T21:11:30,584 Found index url https://www.piwheels.org/simple/
2025-01-28T21:11:30,628 Fetched page https://www.piwheels.org/simple/plasmid-assessor/ as text/html
2025-01-28T21:11:30,629 Skipping link: not a file: https://www.piwheels.org/simple/plasmid-assessor/
2025-01-28T21:11:30,630 Skipping link: not a file: https://pypi.org/simple/plasmid-assessor/
2025-01-28T21:11:30,646 Given no hashes to check 1 links for project 'plasmid-assessor': discarding no candidates
2025-01-28T21:11:30,647 Collecting plasmid-assessor==0.2.0
2025-01-28T21:11:30,649   Created temporary directory: /tmp/pip-unpack-dmc9f3un
2025-01-28T21:11:30,748   Downloading plasmid_assessor-0.2.0.tar.gz (36 kB)
2025-01-28T21:11:30,801   Added plasmid-assessor==0.2.0 from https://files.pythonhosted.org/packages/c8/f1/6ab630870c752de7e96467bfee57bc7d3817d6dbe6d1a807a642078c435e/plasmid_assessor-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-k87w1cmn'
2025-01-28T21:11:30,803   Running setup.py (path:/tmp/pip-wheel-dcukmvgv/plasmid-assessor_7ae419ca1fef4874b9e151693fccb63f/setup.py) egg_info for package plasmid-assessor
2025-01-28T21:11:30,803   Created temporary directory: /tmp/pip-pip-egg-info-l4m2plg9
2025-01-28T21:11:30,804   Preparing metadata (setup.py): started
2025-01-28T21:11:30,805   Running command python setup.py egg_info
2025-01-28T21:11:31,297   Traceback (most recent call last):
2025-01-28T21:11:31,298     File "<string>", line 2, in <module>
2025-01-28T21:11:31,298     File "<pip-setuptools-caller>", line 34, in <module>
2025-01-28T21:11:31,299     File "/tmp/pip-wheel-dcukmvgv/plasmid-assessor_7ae419ca1fef4874b9e151693fccb63f/setup.py", line 13, in <module>
2025-01-28T21:11:31,299       long_description=open("pypi-readme.rst").read(),
2025-01-28T21:11:31,299   FileNotFoundError: [Errno 2] No such file or directory: 'pypi-readme.rst'
2025-01-28T21:11:31,349   ERROR: python setup.py egg_info exited with 1
2025-01-28T21:11:31,367   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2025-01-28T21:11:31,367   exec(compile('"'"''"'"''"'"'
2025-01-28T21:11:31,367   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2025-01-28T21:11:31,367   #
2025-01-28T21:11:31,367   # - It imports setuptools before invoking setup.py, to enable projects that directly
2025-01-28T21:11:31,367   #   import from `distutils.core` to work with newer packaging standards.
2025-01-28T21:11:31,367   # - It provides a clear error message when setuptools is not installed.
2025-01-28T21:11:31,367   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2025-01-28T21:11:31,367   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2025-01-28T21:11:31,367   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2025-01-28T21:11:31,367   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2025-01-28T21:11:31,367   import os, sys, tokenize
2025-01-28T21:11:31,367   
2025-01-28T21:11:31,367   try:
2025-01-28T21:11:31,367       import setuptools
2025-01-28T21:11:31,367   except ImportError as error:
2025-01-28T21:11:31,367       print(
2025-01-28T21:11:31,367           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2025-01-28T21:11:31,367           "the build environment.",
2025-01-28T21:11:31,367           file=sys.stderr,
2025-01-28T21:11:31,367       )
2025-01-28T21:11:31,367       sys.exit(1)
2025-01-28T21:11:31,367   
2025-01-28T21:11:31,367   __file__ = %r
2025-01-28T21:11:31,367   sys.argv[0] = __file__
2025-01-28T21:11:31,367   
2025-01-28T21:11:31,367   if os.path.exists(__file__):
2025-01-28T21:11:31,367       filename = __file__
2025-01-28T21:11:31,367       with tokenize.open(__file__) as f:
2025-01-28T21:11:31,367           setup_py_code = f.read()
2025-01-28T21:11:31,367   else:
2025-01-28T21:11:31,367       filename = "<auto-generated setuptools caller>"
2025-01-28T21:11:31,367       setup_py_code = "from setuptools import setup; setup()"
2025-01-28T21:11:31,367   
2025-01-28T21:11:31,367   exec(compile(setup_py_code, filename, "exec"))
2025-01-28T21:11:31,367   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-dcukmvgv/plasmid-assessor_7ae419ca1fef4874b9e151693fccb63f/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-l4m2plg9[/]
2025-01-28T21:11:31,367   [bold magenta]cwd[/]: /tmp/pip-wheel-dcukmvgv/plasmid-assessor_7ae419ca1fef4874b9e151693fccb63f/
2025-01-28T21:11:31,367   Preparing metadata (setup.py): finished with status 'error'
2025-01-28T21:11:31,368 ERROR: metadata generation failed
2025-01-28T21:11:31,374 Exception information:
2025-01-28T21:11:31,374 Traceback (most recent call last):
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2025-01-28T21:11:31,374     call_subprocess(
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess
2025-01-28T21:11:31,374     raise error
2025-01-28T21:11:31,374 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2025-01-28T21:11:31,374 
2025-01-28T21:11:31,374 The above exception was the direct cause of the following exception:
2025-01-28T21:11:31,374 
2025-01-28T21:11:31,374 Traceback (most recent call last):
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper
2025-01-28T21:11:31,374     status = _inner_run()
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run
2025-01-28T21:11:31,374     return self.run(options, args)
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 67, in wrapper
2025-01-28T21:11:31,374     return func(self, options, args)
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2025-01-28T21:11:31,374     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 95, in resolve
2025-01-28T21:11:31,374     result = self._result = resolver.resolve(
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2025-01-28T21:11:31,374     state = resolution.resolve(requirements, max_rounds=max_rounds)
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2025-01-28T21:11:31,374     self._add_to_criteria(self.state.criteria, r, parent=None)
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2025-01-28T21:11:31,374     if not criterion.candidates:
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2025-01-28T21:11:31,374     return bool(self._sequence)
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 174, in __bool__
2025-01-28T21:11:31,374     return any(self)
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 162, in <genexpr>
2025-01-28T21:11:31,374     return (c for c in iterator if id(c) not in self._incompatible_ids)
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 53, in _iter_built
2025-01-28T21:11:31,374     candidate = func()
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link
2025-01-28T21:11:31,374     base: Optional[BaseCandidate] = self._make_base_candidate_from_link(
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link
2025-01-28T21:11:31,374     self._link_candidate_cache[link] = LinkCandidate(
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in __init__
2025-01-28T21:11:31,374     super().__init__(
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__
2025-01-28T21:11:31,374     self.dist = self._prepare()
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare
2025-01-28T21:11:31,374     dist = self._prepare_distribution()
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 315, in _prepare_distribution
2025-01-28T21:11:31,374     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 527, in prepare_linked_requirement
2025-01-28T21:11:31,374     return self._prepare_linked_requirement(req, parallel_builds)
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 642, in _prepare_linked_requirement
2025-01-28T21:11:31,374     dist = _get_prepared_distribution(
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 72, in _get_prepared_distribution
2025-01-28T21:11:31,374     abstract_dist.prepare_distribution_metadata(
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata
2025-01-28T21:11:31,374     self.req.prepare_metadata()
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata
2025-01-28T21:11:31,374     self.metadata_directory = generate_metadata_legacy(
2025-01-28T21:11:31,374   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2025-01-28T21:11:31,374     raise MetadataGenerationFailed(package_details=details) from error
2025-01-28T21:11:31,374 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2025-01-28T21:11:31,385 Removed plasmid-assessor==0.2.0 from https://files.pythonhosted.org/packages/c8/f1/6ab630870c752de7e96467bfee57bc7d3817d6dbe6d1a807a642078c435e/plasmid_assessor-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-k87w1cmn'
2025-01-28T21:11:31,385 Removed build tracker: '/tmp/pip-build-tracker-k87w1cmn'