2025-02-12T21:41:45,346 Created temporary directory: /tmp/pip-build-tracker-ltezc2nl 2025-02-12T21:41:45,347 Initialized build tracking at /tmp/pip-build-tracker-ltezc2nl 2025-02-12T21:41:45,348 Created build tracker: /tmp/pip-build-tracker-ltezc2nl 2025-02-12T21:41:45,348 Entered build tracker: /tmp/pip-build-tracker-ltezc2nl 2025-02-12T21:41:45,349 Created temporary directory: /tmp/pip-wheel-imvn1k5l 2025-02-12T21:41:45,353 Created temporary directory: /tmp/pip-ephem-wheel-cache-pz9efuhv 2025-02-12T21:41:45,397 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-02-12T21:41:45,400 2 location(s) to search for versions of xi-covutils: 2025-02-12T21:41:45,400 * https://pypi.org/simple/xi-covutils/ 2025-02-12T21:41:45,400 * https://www.piwheels.org/simple/xi-covutils/ 2025-02-12T21:41:45,401 Fetching project page and analyzing links: https://pypi.org/simple/xi-covutils/ 2025-02-12T21:41:45,402 Getting page https://pypi.org/simple/xi-covutils/ 2025-02-12T21:41:45,403 Found index url https://pypi.org/simple/ 2025-02-12T21:41:45,548 Fetched page https://pypi.org/simple/xi-covutils/ as application/vnd.pypi.simple.v1+json 2025-02-12T21:41:45,551 Found link https://files.pythonhosted.org/packages/a5/58/c5e640c748d1a46295190c37b5031409df7abbe740a0870fc890fd054af1/xi_covutils-0.0.12.tar.gz (from https://pypi.org/simple/xi-covutils/), version: 0.0.12 2025-02-12T21:41:45,552 Found link https://files.pythonhosted.org/packages/19/d7/44dc9d9136713a8ccaa45853a10580ac40c226937516bd3b52e5fa53c578/xi_covutils-0.1.9.tar.gz (from https://pypi.org/simple/xi-covutils/), version: 0.1.9 2025-02-12T21:41:45,553 Found link https://files.pythonhosted.org/packages/6e/83/e8c26f0bd206b34b102c5c10c2afd77a4ebd39f802f7f658a3fc77177b19/xi_covutils-0.1.10.tar.gz (from https://pypi.org/simple/xi-covutils/), version: 0.1.10 2025-02-12T21:41:45,554 Found link https://files.pythonhosted.org/packages/d5/a8/632798910d05b965a58a0db0057cc677f28d3c14bfa49fb65cf95024519e/xi_covutils-0.1.11.tar.gz (from https://pypi.org/simple/xi-covutils/), version: 0.1.11 2025-02-12T21:41:45,555 Found link https://files.pythonhosted.org/packages/53/92/e91cb4baecaa4f0d394d64c6331418d5c56d160f4b2fe32d11c1014ea1f8/xi_covutils-0.1.12.tar.gz (from https://pypi.org/simple/xi-covutils/), version: 0.1.12 2025-02-12T21:41:45,555 Found link https://files.pythonhosted.org/packages/66/97/c6cd687af28f65aa7141effdeee0a9310ede57884554e80d5964fac300e0/xi_covutils-0.1.13.tar.gz (from https://pypi.org/simple/xi-covutils/), version: 0.1.13 2025-02-12T21:41:45,556 Found link https://files.pythonhosted.org/packages/fe/37/dbabf36b6c68f0435dc33f0c4b39c599d2e9db64f563478fedd1f3153432/xi_covutils-0.1.16.tar.gz (from https://pypi.org/simple/xi-covutils/), version: 0.1.16 2025-02-12T21:41:45,557 Found link https://files.pythonhosted.org/packages/a3/73/7c3c2b5026d845d93cffc78c2dc131c6404d8e4caba51b4470457f1bc83d/xi_covutils-0.1.17.tar.gz (from https://pypi.org/simple/xi-covutils/), version: 0.1.17 2025-02-12T21:41:45,558 Found link https://files.pythonhosted.org/packages/99/ec/e295e8300d31f2bed5b78a3931f0826f60e01484c1bf02acebe7150bda0d/xi_covutils-0.2.0.tar.gz (from https://pypi.org/simple/xi-covutils/), version: 0.2.0 2025-02-12T21:41:45,559 Found link https://files.pythonhosted.org/packages/49/d7/7ed50ab7d2ce8f78e6ad597f7f6f390920e2ba742e3c896e65549c646cd7/xi_covutils-0.7.0.6.tar.gz (from https://pypi.org/simple/xi-covutils/) (requires-python:>=3.9), version: 0.7.0.6 2025-02-12T21:41:45,560 Fetching project page and analyzing links: https://www.piwheels.org/simple/xi-covutils/ 2025-02-12T21:41:45,560 Getting page https://www.piwheels.org/simple/xi-covutils/ 2025-02-12T21:41:45,562 Found index url https://www.piwheels.org/simple/ 2025-02-12T21:41:45,723 Fetched page https://www.piwheels.org/simple/xi-covutils/ as text/html 2025-02-12T21:41:45,724 Skipping link: not a file: https://www.piwheels.org/simple/xi-covutils/ 2025-02-12T21:41:45,725 Skipping link: not a file: https://pypi.org/simple/xi-covutils/ 2025-02-12T21:41:45,745 Given no hashes to check 1 links for project 'xi-covutils': discarding no candidates 2025-02-12T21:41:45,747 Collecting xi-covutils==0.1.9 2025-02-12T21:41:45,750 Created temporary directory: /tmp/pip-unpack-z9av_q5b 2025-02-12T21:41:45,968 Downloading xi_covutils-0.1.9.tar.gz (5.5 kB) 2025-02-12T21:41:45,997 Added xi-covutils==0.1.9 from https://files.pythonhosted.org/packages/19/d7/44dc9d9136713a8ccaa45853a10580ac40c226937516bd3b52e5fa53c578/xi_covutils-0.1.9.tar.gz to build tracker '/tmp/pip-build-tracker-ltezc2nl' 2025-02-12T21:41:45,999 Running setup.py (path:/tmp/pip-wheel-imvn1k5l/xi-covutils_53eb55969af64ba983455190ea28d579/setup.py) egg_info for package xi-covutils 2025-02-12T21:41:45,999 Created temporary directory: /tmp/pip-pip-egg-info-c48jzg5f 2025-02-12T21:41:46,000 Preparing metadata (setup.py): started 2025-02-12T21:41:46,001 Running command python setup.py egg_info 2025-02-12T21:41:47,068 running egg_info 2025-02-12T21:41:47,098 creating /tmp/pip-pip-egg-info-c48jzg5f/xi_covutils.egg-info 2025-02-12T21:41:47,099 writing /tmp/pip-pip-egg-info-c48jzg5f/xi_covutils.egg-info/PKG-INFO 2025-02-12T21:41:47,102 writing dependency_links to /tmp/pip-pip-egg-info-c48jzg5f/xi_covutils.egg-info/dependency_links.txt 2025-02-12T21:41:47,104 writing top-level names to /tmp/pip-pip-egg-info-c48jzg5f/xi_covutils.egg-info/top_level.txt 2025-02-12T21:41:47,105 writing manifest file '/tmp/pip-pip-egg-info-c48jzg5f/xi_covutils.egg-info/SOURCES.txt' 2025-02-12T21:41:47,191 reading manifest file '/tmp/pip-pip-egg-info-c48jzg5f/xi_covutils.egg-info/SOURCES.txt' 2025-02-12T21:41:47,195 writing manifest file '/tmp/pip-pip-egg-info-c48jzg5f/xi_covutils.egg-info/SOURCES.txt' 2025-02-12T21:41:47,304 Preparing metadata (setup.py): finished with status 'done' 2025-02-12T21:41:47,307 Source in /tmp/pip-wheel-imvn1k5l/xi-covutils_53eb55969af64ba983455190ea28d579 has version 0.1.9, which satisfies requirement xi-covutils==0.1.9 from https://files.pythonhosted.org/packages/19/d7/44dc9d9136713a8ccaa45853a10580ac40c226937516bd3b52e5fa53c578/xi_covutils-0.1.9.tar.gz 2025-02-12T21:41:47,308 Removed xi-covutils==0.1.9 from https://files.pythonhosted.org/packages/19/d7/44dc9d9136713a8ccaa45853a10580ac40c226937516bd3b52e5fa53c578/xi_covutils-0.1.9.tar.gz from build tracker '/tmp/pip-build-tracker-ltezc2nl' 2025-02-12T21:41:47,312 Created temporary directory: /tmp/pip-unpack-ik_p6d5n 2025-02-12T21:41:47,313 Created temporary directory: /tmp/pip-unpack-pn_ox2qv 2025-02-12T21:41:47,313 Building wheels for collected packages: xi-covutils 2025-02-12T21:41:47,318 Created temporary directory: /tmp/pip-wheel-9rp_6h9c 2025-02-12T21:41:47,318 Building wheel for xi-covutils (setup.py): started 2025-02-12T21:41:47,319 Destination directory: /tmp/pip-wheel-9rp_6h9c 2025-02-12T21:41:47,320 Running command python setup.py bdist_wheel 2025-02-12T21:41:48,336 running bdist_wheel 2025-02-12T21:41:48,468 running build 2025-02-12T21:41:48,469 running build_py 2025-02-12T21:41:48,501 creating build/lib/xi_covutils 2025-02-12T21:41:48,503 copying xi_covutils/roc.py -> build/lib/xi_covutils 2025-02-12T21:41:48,505 copying xi_covutils/pdbmapper.py -> build/lib/xi_covutils 2025-02-12T21:41:48,507 copying xi_covutils/distances.py -> build/lib/xi_covutils 2025-02-12T21:41:48,510 copying xi_covutils/__init__.py -> build/lib/xi_covutils 2025-02-12T21:41:48,511 copying xi_covutils/msa.py -> build/lib/xi_covutils 2025-02-12T21:41:48,514 copying xi_covutils/read_results.py -> build/lib/xi_covutils 2025-02-12T21:41:48,543 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-02-12T21:41:48,544 !! 2025-02-12T21:41:48,545 ******************************************************************************** 2025-02-12T21:41:48,546 Please avoid running ``setup.py`` directly. 2025-02-12T21:41:48,547 Instead, use pypa/build, pypa/installer or other 2025-02-12T21:41:48,547 standards-based tools. 2025-02-12T21:41:48,548 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-02-12T21:41:48,549 ******************************************************************************** 2025-02-12T21:41:48,550 !! 2025-02-12T21:41:48,550 self.initialize_options() 2025-02-12T21:41:48,572 installing to build/bdist.linux-armv7l/wheel 2025-02-12T21:41:48,572 running install 2025-02-12T21:41:48,597 running install_lib 2025-02-12T21:41:48,624 creating build/bdist.linux-armv7l/wheel 2025-02-12T21:41:48,627 creating build/bdist.linux-armv7l/wheel/xi_covutils 2025-02-12T21:41:48,628 copying build/lib/xi_covutils/roc.py -> build/bdist.linux-armv7l/wheel/./xi_covutils 2025-02-12T21:41:48,630 copying build/lib/xi_covutils/pdbmapper.py -> build/bdist.linux-armv7l/wheel/./xi_covutils 2025-02-12T21:41:48,631 copying build/lib/xi_covutils/distances.py -> build/bdist.linux-armv7l/wheel/./xi_covutils 2025-02-12T21:41:48,634 copying build/lib/xi_covutils/__init__.py -> build/bdist.linux-armv7l/wheel/./xi_covutils 2025-02-12T21:41:48,635 copying build/lib/xi_covutils/msa.py -> build/bdist.linux-armv7l/wheel/./xi_covutils 2025-02-12T21:41:48,637 copying build/lib/xi_covutils/read_results.py -> build/bdist.linux-armv7l/wheel/./xi_covutils 2025-02-12T21:41:48,638 running install_egg_info 2025-02-12T21:41:48,675 running egg_info 2025-02-12T21:41:48,701 writing xi_covutils.egg-info/PKG-INFO 2025-02-12T21:41:48,704 writing dependency_links to xi_covutils.egg-info/dependency_links.txt 2025-02-12T21:41:48,706 writing top-level names to xi_covutils.egg-info/top_level.txt 2025-02-12T21:41:48,742 reading manifest file 'xi_covutils.egg-info/SOURCES.txt' 2025-02-12T21:41:48,747 writing manifest file 'xi_covutils.egg-info/SOURCES.txt' 2025-02-12T21:41:48,748 Copying xi_covutils.egg-info to build/bdist.linux-armv7l/wheel/./xi_covutils-0.1.9-py3.11.egg-info 2025-02-12T21:41:48,759 running install_scripts 2025-02-12T21:41:48,769 creating build/bdist.linux-armv7l/wheel/xi_covutils-0.1.9.dist-info/WHEEL 2025-02-12T21:41:48,772 creating '/tmp/pip-wheel-9rp_6h9c/xi_covutils-0.1.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-02-12T21:41:48,774 adding 'xi_covutils/__init__.py' 2025-02-12T21:41:48,776 adding 'xi_covutils/distances.py' 2025-02-12T21:41:48,777 adding 'xi_covutils/msa.py' 2025-02-12T21:41:48,778 adding 'xi_covutils/pdbmapper.py' 2025-02-12T21:41:48,780 adding 'xi_covutils/read_results.py' 2025-02-12T21:41:48,781 adding 'xi_covutils/roc.py' 2025-02-12T21:41:48,783 adding 'xi_covutils-0.1.9.dist-info/METADATA' 2025-02-12T21:41:48,784 adding 'xi_covutils-0.1.9.dist-info/WHEEL' 2025-02-12T21:41:48,785 adding 'xi_covutils-0.1.9.dist-info/top_level.txt' 2025-02-12T21:41:48,786 adding 'xi_covutils-0.1.9.dist-info/RECORD' 2025-02-12T21:41:48,787 removing build/bdist.linux-armv7l/wheel 2025-02-12T21:41:48,900 Building wheel for xi-covutils (setup.py): finished with status 'done' 2025-02-12T21:41:48,903 Created wheel for xi-covutils: filename=xi_covutils-0.1.9-py3-none-any.whl size=6512 sha256=08172e44be73172a0bd45eed7e5e0f0d3d9fe33735e62e4a32dbdb6ccbb59ddd 2025-02-12T21:41:48,904 Stored in directory: /tmp/pip-ephem-wheel-cache-pz9efuhv/wheels/23/b3/73/90d57cefcfaf3e6711b5e02ffde2202f82236b5b37ba9d1c04 2025-02-12T21:41:48,912 Successfully built xi-covutils 2025-02-12T21:41:48,916 Removed build tracker: '/tmp/pip-build-tracker-ltezc2nl'