2025-02-28T22:40:32,652 Created temporary directory: /tmp/pip-build-tracker-uc8qc89p 2025-02-28T22:40:32,653 Initialized build tracking at /tmp/pip-build-tracker-uc8qc89p 2025-02-28T22:40:32,654 Created build tracker: /tmp/pip-build-tracker-uc8qc89p 2025-02-28T22:40:32,654 Entered build tracker: /tmp/pip-build-tracker-uc8qc89p 2025-02-28T22:40:32,655 Created temporary directory: /tmp/pip-wheel-ud4ofsxd 2025-02-28T22:40:32,659 Created temporary directory: /tmp/pip-ephem-wheel-cache-d0_83ndg 2025-02-28T22:40:32,706 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-02-28T22:40:32,709 2 location(s) to search for versions of bio-igloo: 2025-02-28T22:40:32,709 * https://pypi.org/simple/bio-igloo/ 2025-02-28T22:40:32,709 * https://www.piwheels.org/simple/bio-igloo/ 2025-02-28T22:40:32,710 Fetching project page and analyzing links: https://pypi.org/simple/bio-igloo/ 2025-02-28T22:40:32,710 Getting page https://pypi.org/simple/bio-igloo/ 2025-02-28T22:40:32,712 Found index url https://pypi.org/simple/ 2025-02-28T22:40:32,935 Fetched page https://pypi.org/simple/bio-igloo/ as application/vnd.pypi.simple.v1+json 2025-02-28T22:40:32,937 Found link https://files.pythonhosted.org/packages/f6/9d/c633aed09dd4cb2f9a34f66121c6d409c76f8383473b040d600ec01c062c/bio-IGLoo-0.1.0.tar.gz (from https://pypi.org/simple/bio-igloo/), version: 0.1.0 2025-02-28T22:40:32,938 Fetching project page and analyzing links: https://www.piwheels.org/simple/bio-igloo/ 2025-02-28T22:40:32,938 Getting page https://www.piwheels.org/simple/bio-igloo/ 2025-02-28T22:40:32,939 Found index url https://www.piwheels.org/simple/ 2025-02-28T22:40:33,101 Fetched page https://www.piwheels.org/simple/bio-igloo/ as text/html 2025-02-28T22:40:33,103 Skipping link: not a file: https://www.piwheels.org/simple/bio-igloo/ 2025-02-28T22:40:33,103 Skipping link: not a file: https://pypi.org/simple/bio-igloo/ 2025-02-28T22:40:33,123 Given no hashes to check 1 links for project 'bio-igloo': discarding no candidates 2025-02-28T22:40:33,125 Collecting bio-igloo==0.1.0 2025-02-28T22:40:33,127 Created temporary directory: /tmp/pip-unpack-8flu01wg 2025-02-28T22:40:33,352 Downloading bio-IGLoo-0.1.0.tar.gz (1.1 MB) 2025-02-28T22:40:33,863 Added bio-igloo==0.1.0 from https://files.pythonhosted.org/packages/f6/9d/c633aed09dd4cb2f9a34f66121c6d409c76f8383473b040d600ec01c062c/bio-IGLoo-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-uc8qc89p' 2025-02-28T22:40:33,866 Running setup.py (path:/tmp/pip-wheel-ud4ofsxd/bio-igloo_f56b45484eef4d63bffed0c3f3c9bef0/setup.py) egg_info for package bio-igloo 2025-02-28T22:40:33,867 Created temporary directory: /tmp/pip-pip-egg-info-s87f9ua4 2025-02-28T22:40:33,867 Preparing metadata (setup.py): started 2025-02-28T22:40:33,869 Running command python setup.py egg_info 2025-02-28T22:40:35,162 Preparing metadata (setup.py): finished with status 'done' 2025-02-28T22:40:35,166 Source in /tmp/pip-wheel-ud4ofsxd/bio-igloo_f56b45484eef4d63bffed0c3f3c9bef0 has version 0.1.0, which satisfies requirement bio-igloo==0.1.0 from https://files.pythonhosted.org/packages/f6/9d/c633aed09dd4cb2f9a34f66121c6d409c76f8383473b040d600ec01c062c/bio-IGLoo-0.1.0.tar.gz 2025-02-28T22:40:35,167 Removed bio-igloo==0.1.0 from https://files.pythonhosted.org/packages/f6/9d/c633aed09dd4cb2f9a34f66121c6d409c76f8383473b040d600ec01c062c/bio-IGLoo-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-uc8qc89p' 2025-02-28T22:40:35,173 Created temporary directory: /tmp/pip-unpack-objju48d 2025-02-28T22:40:35,174 Created temporary directory: /tmp/pip-unpack-y1hdlm2i 2025-02-28T22:40:35,174 Building wheels for collected packages: bio-igloo 2025-02-28T22:40:35,178 Created temporary directory: /tmp/pip-wheel-yursuros 2025-02-28T22:40:35,179 Building wheel for bio-igloo (setup.py): started 2025-02-28T22:40:35,180 Destination directory: /tmp/pip-wheel-yursuros 2025-02-28T22:40:35,181 Running command python setup.py bdist_wheel 2025-02-28T22:40:36,456 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'IGLoo.materials' is absent from the `packages` configuration. 2025-02-28T22:40:36,457 !! 2025-02-28T22:40:36,458 ******************************************************************************** 2025-02-28T22:40:36,458 ############################ 2025-02-28T22:40:36,459 # Package would be ignored # 2025-02-28T22:40:36,459 ############################ 2025-02-28T22:40:36,459 Python recognizes 'IGLoo.materials' as an importable package[^1], 2025-02-28T22:40:36,460 but it is absent from setuptools' `packages` configuration. 2025-02-28T22:40:36,461 This leads to an ambiguous overall configuration. If you want to distribute this 2025-02-28T22:40:36,462 package, please make sure that 'IGLoo.materials' is explicitly added 2025-02-28T22:40:36,462 to the `packages` configuration field. 2025-02-28T22:40:36,463 Alternatively, you can also rely on setuptools' discovery methods 2025-02-28T22:40:36,463 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-02-28T22:40:36,464 instead of `find_packages(...)`/`find:`). 2025-02-28T22:40:36,464 You can read more about "package discovery" on setuptools documentation page: 2025-02-28T22:40:36,465 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-02-28T22:40:36,466 If you don't want 'IGLoo.materials' to be distributed and are 2025-02-28T22:40:36,467 already explicitly excluding 'IGLoo.materials' via 2025-02-28T22:40:36,467 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-02-28T22:40:36,467 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-02-28T22:40:36,468 combination with a more fine grained `package-data` configuration. 2025-02-28T22:40:36,469 You can read more about "package data files" on setuptools documentation page: 2025-02-28T22:40:36,470 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-02-28T22:40:36,471 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-02-28T22:40:36,472 even if it does not contain any `.py` files. 2025-02-28T22:40:36,473 On the other hand, currently there is no concept of package data 2025-02-28T22:40:36,473 directory, all directories are treated like packages. 2025-02-28T22:40:36,474 ******************************************************************************** 2025-02-28T22:40:36,475 !! 2025-02-28T22:40:36,476 check.warn(importable) 2025-02-28T22:40:36,477 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'IGLoo.materials.gene_annotations' is absent from the `packages` configuration. 2025-02-28T22:40:36,477 !! 2025-02-28T22:40:36,478 ******************************************************************************** 2025-02-28T22:40:36,479 ############################ 2025-02-28T22:40:36,479 # Package would be ignored # 2025-02-28T22:40:36,479 ############################ 2025-02-28T22:40:36,480 Python recognizes 'IGLoo.materials.gene_annotations' as an importable package[^1], 2025-02-28T22:40:36,481 but it is absent from setuptools' `packages` configuration. 2025-02-28T22:40:36,482 This leads to an ambiguous overall configuration. If you want to distribute this 2025-02-28T22:40:36,482 package, please make sure that 'IGLoo.materials.gene_annotations' is explicitly added 2025-02-28T22:40:36,482 to the `packages` configuration field. 2025-02-28T22:40:36,483 Alternatively, you can also rely on setuptools' discovery methods 2025-02-28T22:40:36,484 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-02-28T22:40:36,485 instead of `find_packages(...)`/`find:`). 2025-02-28T22:40:36,486 You can read more about "package discovery" on setuptools documentation page: 2025-02-28T22:40:36,487 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-02-28T22:40:36,488 If you don't want 'IGLoo.materials.gene_annotations' to be distributed and are 2025-02-28T22:40:36,489 already explicitly excluding 'IGLoo.materials.gene_annotations' via 2025-02-28T22:40:36,489 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-02-28T22:40:36,489 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-02-28T22:40:36,490 combination with a more fine grained `package-data` configuration. 2025-02-28T22:40:36,491 You can read more about "package data files" on setuptools documentation page: 2025-02-28T22:40:36,491 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-02-28T22:40:36,493 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-02-28T22:40:36,493 even if it does not contain any `.py` files. 2025-02-28T22:40:36,494 On the other hand, currently there is no concept of package data 2025-02-28T22:40:36,494 directory, all directories are treated like packages. 2025-02-28T22:40:36,495 ******************************************************************************** 2025-02-28T22:40:36,496 !! 2025-02-28T22:40:36,496 check.warn(importable) 2025-02-28T22:40:36,497 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'IGLoo.materials.gene_annotations.GRCh38' is absent from the `packages` configuration. 2025-02-28T22:40:36,497 !! 2025-02-28T22:40:36,498 ******************************************************************************** 2025-02-28T22:40:36,498 ############################ 2025-02-28T22:40:36,499 # Package would be ignored # 2025-02-28T22:40:36,499 ############################ 2025-02-28T22:40:36,500 Python recognizes 'IGLoo.materials.gene_annotations.GRCh38' as an importable package[^1], 2025-02-28T22:40:36,501 but it is absent from setuptools' `packages` configuration. 2025-02-28T22:40:36,501 This leads to an ambiguous overall configuration. If you want to distribute this 2025-02-28T22:40:36,502 package, please make sure that 'IGLoo.materials.gene_annotations.GRCh38' is explicitly added 2025-02-28T22:40:36,502 to the `packages` configuration field. 2025-02-28T22:40:36,503 Alternatively, you can also rely on setuptools' discovery methods 2025-02-28T22:40:36,504 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-02-28T22:40:36,504 instead of `find_packages(...)`/`find:`). 2025-02-28T22:40:36,505 You can read more about "package discovery" on setuptools documentation page: 2025-02-28T22:40:36,507 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-02-28T22:40:36,508 If you don't want 'IGLoo.materials.gene_annotations.GRCh38' to be distributed and are 2025-02-28T22:40:36,508 already explicitly excluding 'IGLoo.materials.gene_annotations.GRCh38' via 2025-02-28T22:40:36,509 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-02-28T22:40:36,509 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-02-28T22:40:36,510 combination with a more fine grained `package-data` configuration. 2025-02-28T22:40:36,511 You can read more about "package data files" on setuptools documentation page: 2025-02-28T22:40:36,512 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-02-28T22:40:36,514 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-02-28T22:40:36,514 even if it does not contain any `.py` files. 2025-02-28T22:40:36,515 On the other hand, currently there is no concept of package data 2025-02-28T22:40:36,515 directory, all directories are treated like packages. 2025-02-28T22:40:36,516 ******************************************************************************** 2025-02-28T22:40:36,517 !! 2025-02-28T22:40:36,518 check.warn(importable) 2025-02-28T22:40:36,518 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'IGLoo.materials.personalized_ref' is absent from the `packages` configuration. 2025-02-28T22:40:36,519 !! 2025-02-28T22:40:36,519 ******************************************************************************** 2025-02-28T22:40:36,520 ############################ 2025-02-28T22:40:36,520 # Package would be ignored # 2025-02-28T22:40:36,521 ############################ 2025-02-28T22:40:36,521 Python recognizes 'IGLoo.materials.personalized_ref' as an importable package[^1], 2025-02-28T22:40:36,522 but it is absent from setuptools' `packages` configuration. 2025-02-28T22:40:36,523 This leads to an ambiguous overall configuration. If you want to distribute this 2025-02-28T22:40:36,523 package, please make sure that 'IGLoo.materials.personalized_ref' is explicitly added 2025-02-28T22:40:36,524 to the `packages` configuration field. 2025-02-28T22:40:36,525 Alternatively, you can also rely on setuptools' discovery methods 2025-02-28T22:40:36,525 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-02-28T22:40:36,526 instead of `find_packages(...)`/`find:`). 2025-02-28T22:40:36,527 You can read more about "package discovery" on setuptools documentation page: 2025-02-28T22:40:36,528 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-02-28T22:40:36,532 If you don't want 'IGLoo.materials.personalized_ref' to be distributed and are 2025-02-28T22:40:36,536 already explicitly excluding 'IGLoo.materials.personalized_ref' via 2025-02-28T22:40:36,541 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-02-28T22:40:36,541 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-02-28T22:40:36,542 combination with a more fine grained `package-data` configuration. 2025-02-28T22:40:36,543 You can read more about "package data files" on setuptools documentation page: 2025-02-28T22:40:36,544 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-02-28T22:40:36,546 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-02-28T22:40:36,547 even if it does not contain any `.py` files. 2025-02-28T22:40:36,548 On the other hand, currently there is no concept of package data 2025-02-28T22:40:36,548 directory, all directories are treated like packages. 2025-02-28T22:40:36,549 ******************************************************************************** 2025-02-28T22:40:36,550 !! 2025-02-28T22:40:36,551 check.warn(importable) 2025-02-28T22:40:36,665 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-02-28T22:40:36,665 !! 2025-02-28T22:40:36,666 ******************************************************************************** 2025-02-28T22:40:36,667 Please avoid running ``setup.py`` directly. 2025-02-28T22:40:36,668 Instead, use pypa/build, pypa/installer or other 2025-02-28T22:40:36,668 standards-based tools. 2025-02-28T22:40:36,669 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-02-28T22:40:36,670 ******************************************************************************** 2025-02-28T22:40:36,671 !! 2025-02-28T22:40:36,672 self.initialize_options() 2025-02-28T22:40:39,282 Building wheel for bio-igloo (setup.py): finished with status 'done' 2025-02-28T22:40:39,297 Created wheel for bio-igloo: filename=bio_IGLoo-0.1.0-py3-none-any.whl size=1191527 sha256=8f0a2502e6a44ee02d5189d49dca7dceb2bd288f04f69d3d239a9369799f3ce6 2025-02-28T22:40:39,298 Stored in directory: /tmp/pip-ephem-wheel-cache-d0_83ndg/wheels/6f/5c/04/c2bd474be15a19648b9b645f9f271fd4c7aba6f2b6ced21f0b 2025-02-28T22:40:39,310 Successfully built bio-igloo 2025-02-28T22:40:39,346 Removed build tracker: '/tmp/pip-build-tracker-uc8qc89p'