2025-03-11T13:46:20,186 Created temporary directory: /tmp/pip-build-tracker-_ohrb7p2
2025-03-11T13:46:20,187 Initialized build tracking at /tmp/pip-build-tracker-_ohrb7p2
2025-03-11T13:46:20,187 Created build tracker: /tmp/pip-build-tracker-_ohrb7p2
2025-03-11T13:46:20,188 Entered build tracker: /tmp/pip-build-tracker-_ohrb7p2
2025-03-11T13:46:20,189 Created temporary directory: /tmp/pip-wheel-6unroxyy
2025-03-11T13:46:20,193 Created temporary directory: /tmp/pip-ephem-wheel-cache-bcxd8m06
2025-03-11T13:46:20,237 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-03-11T13:46:20,240 2 location(s) to search for versions of clria:
2025-03-11T13:46:20,240 * https://pypi.org/simple/clria/
2025-03-11T13:46:20,240 * https://www.piwheels.org/simple/clria/
2025-03-11T13:46:20,240 Fetching project page and analyzing links: https://pypi.org/simple/clria/
2025-03-11T13:46:20,241 Getting page https://pypi.org/simple/clria/
2025-03-11T13:46:20,243 Found index url https://pypi.org/simple/
2025-03-11T13:46:20,386 Fetched page https://pypi.org/simple/clria/ as application/vnd.pypi.simple.v1+json
2025-03-11T13:46:20,388   Skipping link: No binaries permitted for clria: https://files.pythonhosted.org/packages/1f/79/5dad94173a178658f43d2a3fce26bfb54ed2eace47862ff6ac1c09103e8f/clria-1.0.7-py3-none-any.whl (from https://pypi.org/simple/clria/) (requires-python:>=3.8)
2025-03-11T13:46:20,389   Found link https://files.pythonhosted.org/packages/e2/39/3247f9f0cfcbe5658f088a503b84b39b11cef7ebfed31c13948fe131f5ef/clria-1.0.7.tar.gz (from https://pypi.org/simple/clria/) (requires-python:>=3.8), version: 1.0.7
2025-03-11T13:46:20,390   Skipping link: No binaries permitted for clria: https://files.pythonhosted.org/packages/8f/65/5b431deb3b03f7081e43820b59ad0238e418ef647fdd68d50d8f8c2eecf3/clria-1.0.8-py3-none-any.whl (from https://pypi.org/simple/clria/) (requires-python:>=3.8)
2025-03-11T13:46:20,391   Found link https://files.pythonhosted.org/packages/57/e4/c89f5c9efec92a3691bd7084c9ee7873d39d63a3ce5f1ca262d702a40555/clria-1.0.8.tar.gz (from https://pypi.org/simple/clria/) (requires-python:>=3.8), version: 1.0.8
2025-03-11T13:46:20,391   Skipping link: No binaries permitted for clria: https://files.pythonhosted.org/packages/59/1a/9e3d65bcd498df808a4930803f6652af3a6ec17ca83e876289b6798e2bc9/clria-1.0.9-py3-none-any.whl (from https://pypi.org/simple/clria/) (requires-python:>=3.8)
2025-03-11T13:46:20,392   Found link https://files.pythonhosted.org/packages/f5/f7/78a0dda98fe686c7adb1bf167455228f76a7735c38785215014c9aad5a0f/clria-1.0.9.tar.gz (from https://pypi.org/simple/clria/) (requires-python:>=3.8), version: 1.0.9
2025-03-11T13:46:20,393 Fetching project page and analyzing links: https://www.piwheels.org/simple/clria/
2025-03-11T13:46:20,394 Getting page https://www.piwheels.org/simple/clria/
2025-03-11T13:46:20,396 Found index url https://www.piwheels.org/simple/
2025-03-11T13:46:20,555 Fetched page https://www.piwheels.org/simple/clria/ as text/html
2025-03-11T13:46:20,556   Skipping link: No binaries permitted for clria: https://www.piwheels.org/simple/clria/clria-1.0.8-py3-none-any.whl#sha256=c016fc63918f7222e37a21f787674721f361f05f517ed40fa58c943b493f10dc (from https://www.piwheels.org/simple/clria/) (requires-python:>=3.8)
2025-03-11T13:46:20,557   Skipping link: No binaries permitted for clria: https://www.piwheels.org/simple/clria/clria-1.0.7-py3-none-any.whl#sha256=0f827f0423f20d9810c4700b821399d73f27eb0760ce7f3711d72adebb307b5e (from https://www.piwheels.org/simple/clria/) (requires-python:>=3.8)
2025-03-11T13:46:20,558 Skipping link: not a file: https://www.piwheels.org/simple/clria/
2025-03-11T13:46:20,558 Skipping link: not a file: https://pypi.org/simple/clria/
2025-03-11T13:46:20,578 Given no hashes to check 1 links for project 'clria': discarding no candidates
2025-03-11T13:46:20,580 Collecting clria==1.0.9
2025-03-11T13:46:20,582   Created temporary directory: /tmp/pip-unpack-zklzov74
2025-03-11T13:46:20,798   Downloading clria-1.0.9.tar.gz (51 kB)
2025-03-11T13:46:20,911   Added clria==1.0.9 from https://files.pythonhosted.org/packages/f5/f7/78a0dda98fe686c7adb1bf167455228f76a7735c38785215014c9aad5a0f/clria-1.0.9.tar.gz to build tracker '/tmp/pip-build-tracker-_ohrb7p2'
2025-03-11T13:46:20,913   Running setup.py (path:/tmp/pip-wheel-6unroxyy/clria_024ae2c9461545fb8650f1dfee7b0ad6/setup.py) egg_info for package clria
2025-03-11T13:46:20,914   Created temporary directory: /tmp/pip-pip-egg-info-vy9wqxtu
2025-03-11T13:46:20,915   Preparing metadata (setup.py): started
2025-03-11T13:46:20,916   Running command python setup.py egg_info
2025-03-11T13:46:21,973   running egg_info
2025-03-11T13:46:22,000   creating /tmp/pip-pip-egg-info-vy9wqxtu/clria.egg-info
2025-03-11T13:46:22,001   writing /tmp/pip-pip-egg-info-vy9wqxtu/clria.egg-info/PKG-INFO
2025-03-11T13:46:22,005   writing dependency_links to /tmp/pip-pip-egg-info-vy9wqxtu/clria.egg-info/dependency_links.txt
2025-03-11T13:46:22,007   writing requirements to /tmp/pip-pip-egg-info-vy9wqxtu/clria.egg-info/requires.txt
2025-03-11T13:46:22,008   writing top-level names to /tmp/pip-pip-egg-info-vy9wqxtu/clria.egg-info/top_level.txt
2025-03-11T13:46:22,009   writing manifest file '/tmp/pip-pip-egg-info-vy9wqxtu/clria.egg-info/SOURCES.txt'
2025-03-11T13:46:22,101   reading manifest file '/tmp/pip-pip-egg-info-vy9wqxtu/clria.egg-info/SOURCES.txt'
2025-03-11T13:46:22,103   reading manifest template 'MANIFEST.in'
2025-03-11T13:46:22,105   adding license file 'LICENSE'
2025-03-11T13:46:22,107   writing manifest file '/tmp/pip-pip-egg-info-vy9wqxtu/clria.egg-info/SOURCES.txt'
2025-03-11T13:46:22,218   Preparing metadata (setup.py): finished with status 'done'
2025-03-11T13:46:22,222   Source in /tmp/pip-wheel-6unroxyy/clria_024ae2c9461545fb8650f1dfee7b0ad6 has version 1.0.9, which satisfies requirement clria==1.0.9 from https://files.pythonhosted.org/packages/f5/f7/78a0dda98fe686c7adb1bf167455228f76a7735c38785215014c9aad5a0f/clria-1.0.9.tar.gz
2025-03-11T13:46:22,223   Removed clria==1.0.9 from https://files.pythonhosted.org/packages/f5/f7/78a0dda98fe686c7adb1bf167455228f76a7735c38785215014c9aad5a0f/clria-1.0.9.tar.gz from build tracker '/tmp/pip-build-tracker-_ohrb7p2'
2025-03-11T13:46:22,231 Created temporary directory: /tmp/pip-unpack-q4ts2joz
2025-03-11T13:46:22,232 Created temporary directory: /tmp/pip-unpack-2qyfawn5
2025-03-11T13:46:22,233 Building wheels for collected packages: clria
2025-03-11T13:46:22,237   Created temporary directory: /tmp/pip-wheel-ue_jgj1q
2025-03-11T13:46:22,237   Building wheel for clria (setup.py): started
2025-03-11T13:46:22,239   Destination directory: /tmp/pip-wheel-ue_jgj1q
2025-03-11T13:46:22,239   Running command python setup.py bdist_wheel
2025-03-11T13:46:23,331   running bdist_wheel
2025-03-11T13:46:23,467   running build
2025-03-11T13:46:23,468   running build_py
2025-03-11T13:46:23,497   creating build/lib/clria
2025-03-11T13:46:23,499   copying clria/__init__.py -> build/lib/clria
2025-03-11T13:46:23,502   creating build/lib/clria/simulate
2025-03-11T13:46:23,503   copying clria/simulate/_iot.py -> build/lib/clria/simulate
2025-03-11T13:46:23,506   copying clria/simulate/__init__.py -> build/lib/clria/simulate
2025-03-11T13:46:23,508   creating build/lib/clria/tools
2025-03-11T13:46:23,509   copying clria/tools/_spin.py -> build/lib/clria/tools
2025-03-11T13:46:23,511   copying clria/tools/_tca.py -> build/lib/clria/tools
2025-03-11T13:46:23,515   copying clria/tools/_uotr.py -> build/lib/clria/tools
2025-03-11T13:46:23,517   copying clria/tools/_mmot.py -> build/lib/clria/tools
2025-03-11T13:46:23,520   copying clria/tools/__init__.py -> build/lib/clria/tools
2025-03-11T13:46:23,522   creating build/lib/clria/plotting
2025-03-11T13:46:23,523   copying clria/plotting/_plotting.py -> build/lib/clria/plotting
2025-03-11T13:46:23,526   copying clria/plotting/__init__.py -> build/lib/clria/plotting
2025-03-11T13:46:23,528   creating build/lib/clria/preprocessing
2025-03-11T13:46:23,529   copying clria/preprocessing/_lr.py -> build/lib/clria/preprocessing
2025-03-11T13:46:23,531   copying clria/preprocessing/__init__.py -> build/lib/clria/preprocessing
2025-03-11T13:46:23,533   copying clria/preprocessing/_bncm.py -> build/lib/clria/preprocessing
2025-03-11T13:46:23,535   running egg_info
2025-03-11T13:46:23,563   writing clria.egg-info/PKG-INFO
2025-03-11T13:46:23,566   writing dependency_links to clria.egg-info/dependency_links.txt
2025-03-11T13:46:23,568   writing requirements to clria.egg-info/requires.txt
2025-03-11T13:46:23,569   writing top-level names to clria.egg-info/top_level.txt
2025-03-11T13:46:23,603   reading manifest file 'clria.egg-info/SOURCES.txt'
2025-03-11T13:46:23,606   reading manifest template 'MANIFEST.in'
2025-03-11T13:46:23,608   adding license file 'LICENSE'
2025-03-11T13:46:23,611   writing manifest file 'clria.egg-info/SOURCES.txt'
2025-03-11T13:46:23,613   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:220: _Warning: Package 'clria.preprocessing.LRdatabase' is absent from the `packages` configuration.
2025-03-11T13:46:23,614   !!

2025-03-11T13:46:23,615           ********************************************************************************
2025-03-11T13:46:23,615           ############################
2025-03-11T13:46:23,615           # Package would be ignored #
2025-03-11T13:46:23,616           ############################
2025-03-11T13:46:23,616           Python recognizes 'clria.preprocessing.LRdatabase' as an importable package[^1],
2025-03-11T13:46:23,617           but it is absent from setuptools' `packages` configuration.

2025-03-11T13:46:23,618           This leads to an ambiguous overall configuration. If you want to distribute this
2025-03-11T13:46:23,618           package, please make sure that 'clria.preprocessing.LRdatabase' is explicitly added
2025-03-11T13:46:23,619           to the `packages` configuration field.

2025-03-11T13:46:23,620           Alternatively, you can also rely on setuptools' discovery methods
2025-03-11T13:46:23,620           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-03-11T13:46:23,621           instead of `find_packages(...)`/`find:`).

2025-03-11T13:46:23,623           You can read more about "package discovery" on setuptools documentation page:

2025-03-11T13:46:23,624           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-03-11T13:46:23,625           If you don't want 'clria.preprocessing.LRdatabase' to be distributed and are
2025-03-11T13:46:23,626           already explicitly excluding 'clria.preprocessing.LRdatabase' via
2025-03-11T13:46:23,627           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-03-11T13:46:23,627           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-03-11T13:46:23,628           combination with a more fine grained `package-data` configuration.

2025-03-11T13:46:23,630           You can read more about "package data files" on setuptools documentation page:

2025-03-11T13:46:23,632           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-03-11T13:46:23,633           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-03-11T13:46:23,635                 even if it does not contain any `.py` files.
2025-03-11T13:46:23,635                 On the other hand, currently there is no concept of package data
2025-03-11T13:46:23,636                 directory, all directories are treated like packages.
2025-03-11T13:46:23,637           ********************************************************************************

2025-03-11T13:46:23,638   !!
2025-03-11T13:46:23,638     check.warn(importable)
2025-03-11T13:46:23,639   creating build/lib/clria/preprocessing/LRdatabase
2025-03-11T13:46:23,640   copying clria/preprocessing/LRdatabase/lrdb_cell.tsv -> build/lib/clria/preprocessing/LRdatabase
2025-03-11T13:46:23,640   copying clria/preprocessing/LRdatabase/lrdb_neuron.tsv -> build/lib/clria/preprocessing/LRdatabase
2025-03-11T13:46:23,662   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2025-03-11T13:46:23,663   !!

2025-03-11T13:46:23,664           ********************************************************************************
2025-03-11T13:46:23,664           Please avoid running ``setup.py`` directly.
2025-03-11T13:46:23,665           Instead, use pypa/build, pypa/installer or other
2025-03-11T13:46:23,665           standards-based tools.

2025-03-11T13:46:23,666           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2025-03-11T13:46:23,666           ********************************************************************************

2025-03-11T13:46:23,667   !!
2025-03-11T13:46:23,668     self.initialize_options()
2025-03-11T13:46:23,690   installing to build/bdist.linux-armv7l/wheel
2025-03-11T13:46:23,690   running install
2025-03-11T13:46:23,714   running install_lib
2025-03-11T13:46:23,741   creating build/bdist.linux-armv7l/wheel
2025-03-11T13:46:23,743   creating build/bdist.linux-armv7l/wheel/clria
2025-03-11T13:46:23,745   creating build/bdist.linux-armv7l/wheel/clria/simulate
2025-03-11T13:46:23,746   copying build/lib/clria/simulate/_iot.py -> build/bdist.linux-armv7l/wheel/./clria/simulate
2025-03-11T13:46:23,748   copying build/lib/clria/simulate/__init__.py -> build/bdist.linux-armv7l/wheel/./clria/simulate
2025-03-11T13:46:23,751   creating build/bdist.linux-armv7l/wheel/clria/tools
2025-03-11T13:46:23,752   copying build/lib/clria/tools/_spin.py -> build/bdist.linux-armv7l/wheel/./clria/tools
2025-03-11T13:46:23,754   copying build/lib/clria/tools/_tca.py -> build/bdist.linux-armv7l/wheel/./clria/tools
2025-03-11T13:46:23,756   copying build/lib/clria/tools/_uotr.py -> build/bdist.linux-armv7l/wheel/./clria/tools
2025-03-11T13:46:23,758   copying build/lib/clria/tools/_mmot.py -> build/bdist.linux-armv7l/wheel/./clria/tools
2025-03-11T13:46:23,761   copying build/lib/clria/tools/__init__.py -> build/bdist.linux-armv7l/wheel/./clria/tools
2025-03-11T13:46:23,763   creating build/bdist.linux-armv7l/wheel/clria/plotting
2025-03-11T13:46:23,764   copying build/lib/clria/plotting/_plotting.py -> build/bdist.linux-armv7l/wheel/./clria/plotting
2025-03-11T13:46:23,767   copying build/lib/clria/plotting/__init__.py -> build/bdist.linux-armv7l/wheel/./clria/plotting
2025-03-11T13:46:23,769   creating build/bdist.linux-armv7l/wheel/clria/preprocessing
2025-03-11T13:46:23,771   creating build/bdist.linux-armv7l/wheel/clria/preprocessing/LRdatabase
2025-03-11T13:46:23,772   copying build/lib/clria/preprocessing/LRdatabase/lrdb_cell.tsv -> build/bdist.linux-armv7l/wheel/./clria/preprocessing/LRdatabase
2025-03-11T13:46:23,782   copying build/lib/clria/preprocessing/LRdatabase/lrdb_neuron.tsv -> build/bdist.linux-armv7l/wheel/./clria/preprocessing/LRdatabase
2025-03-11T13:46:23,785   copying build/lib/clria/preprocessing/_lr.py -> build/bdist.linux-armv7l/wheel/./clria/preprocessing
2025-03-11T13:46:23,787   copying build/lib/clria/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/./clria/preprocessing
2025-03-11T13:46:23,789   copying build/lib/clria/preprocessing/_bncm.py -> build/bdist.linux-armv7l/wheel/./clria/preprocessing
2025-03-11T13:46:23,791   copying build/lib/clria/__init__.py -> build/bdist.linux-armv7l/wheel/./clria
2025-03-11T13:46:23,793   running install_egg_info
2025-03-11T13:46:23,833   Copying clria.egg-info to build/bdist.linux-armv7l/wheel/./clria-1.0.9-py3.11.egg-info
2025-03-11T13:46:23,843   running install_scripts
2025-03-11T13:46:23,859   creating build/bdist.linux-armv7l/wheel/clria-1.0.9.dist-info/WHEEL
2025-03-11T13:46:23,862   creating '/tmp/pip-wheel-ue_jgj1q/clria-1.0.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-03-11T13:46:23,864   adding 'clria/__init__.py'
2025-03-11T13:46:23,866   adding 'clria/plotting/__init__.py'
2025-03-11T13:46:23,868   adding 'clria/plotting/_plotting.py'
2025-03-11T13:46:23,869   adding 'clria/preprocessing/__init__.py'
2025-03-11T13:46:23,871   adding 'clria/preprocessing/_bncm.py'
2025-03-11T13:46:23,872   adding 'clria/preprocessing/_lr.py'
2025-03-11T13:46:23,881   adding 'clria/preprocessing/LRdatabase/lrdb_cell.tsv'
2025-03-11T13:46:23,887   adding 'clria/preprocessing/LRdatabase/lrdb_neuron.tsv'
2025-03-11T13:46:23,890   adding 'clria/simulate/__init__.py'
2025-03-11T13:46:23,891   adding 'clria/simulate/_iot.py'
2025-03-11T13:46:23,893   adding 'clria/tools/__init__.py'
2025-03-11T13:46:23,896   adding 'clria/tools/_mmot.py'
2025-03-11T13:46:23,898   adding 'clria/tools/_spin.py'
2025-03-11T13:46:23,899   adding 'clria/tools/_tca.py'
2025-03-11T13:46:23,901   adding 'clria/tools/_uotr.py'
2025-03-11T13:46:23,903   adding 'clria-1.0.9.dist-info/LICENSE'
2025-03-11T13:46:23,904   adding 'clria-1.0.9.dist-info/METADATA'
2025-03-11T13:46:23,905   adding 'clria-1.0.9.dist-info/WHEEL'
2025-03-11T13:46:23,906   adding 'clria-1.0.9.dist-info/top_level.txt'
2025-03-11T13:46:23,907   adding 'clria-1.0.9.dist-info/RECORD'
2025-03-11T13:46:23,910   removing build/bdist.linux-armv7l/wheel
2025-03-11T13:46:24,029   Building wheel for clria (setup.py): finished with status 'done'
2025-03-11T13:46:24,032   Created wheel for clria: filename=clria-1.0.9-py3-none-any.whl size=51247 sha256=531b9008f38febbd058c32340e597ee562fdfa773927bc83ef11f8cb6880864f
2025-03-11T13:46:24,033   Stored in directory: /tmp/pip-ephem-wheel-cache-bcxd8m06/wheels/6e/cd/2d/fda6c7da31e83d1994cbec2d91fb352aac7bc114ba68d51cd1
2025-03-11T13:46:24,044 Successfully built clria
2025-03-11T13:46:24,049 Removed build tracker: '/tmp/pip-build-tracker-_ohrb7p2'