2025-03-17T03:05:53,256 Created temporary directory: /tmp/pip-build-tracker-j5ifdeir 2025-03-17T03:05:53,257 Initialized build tracking at /tmp/pip-build-tracker-j5ifdeir 2025-03-17T03:05:53,257 Created build tracker: /tmp/pip-build-tracker-j5ifdeir 2025-03-17T03:05:53,258 Entered build tracker: /tmp/pip-build-tracker-j5ifdeir 2025-03-17T03:05:53,259 Created temporary directory: /tmp/pip-wheel-3iqa4eys 2025-03-17T03:05:53,263 Created temporary directory: /tmp/pip-ephem-wheel-cache-0u5cat96 2025-03-17T03:05:53,307 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-03-17T03:05:53,310 2 location(s) to search for versions of concord-sc: 2025-03-17T03:05:53,310 * https://pypi.org/simple/concord-sc/ 2025-03-17T03:05:53,310 * https://www.piwheels.org/simple/concord-sc/ 2025-03-17T03:05:53,311 Fetching project page and analyzing links: https://pypi.org/simple/concord-sc/ 2025-03-17T03:05:53,312 Getting page https://pypi.org/simple/concord-sc/ 2025-03-17T03:05:53,313 Found index url https://pypi.org/simple/ 2025-03-17T03:05:53,534 Fetched page https://pypi.org/simple/concord-sc/ as application/vnd.pypi.simple.v1+json 2025-03-17T03:05:53,536 Skipping link: No binaries permitted for concord-sc: https://files.pythonhosted.org/packages/8e/ae/22e0b7b29b9c9c1a4ba16c91c5017059a7e48367aa4aaa9568e5cb525092/concord_sc-0.9.0-py3-none-any.whl (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7) 2025-03-17T03:05:53,537 Found link https://files.pythonhosted.org/packages/10/58/79f4033f7fbc06d0c2c0a78ddb77debf2bee47eb6f914cadb8a00095e429/concord_sc-0.9.0.tar.gz (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7), version: 0.9.0 2025-03-17T03:05:53,537 Skipping link: No binaries permitted for concord-sc: https://files.pythonhosted.org/packages/4d/ab/8b89e30462620a4338e2337127525d69413ed90b969bcc61264c0b547e96/concord_sc-0.9.1-py3-none-any.whl (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7) 2025-03-17T03:05:53,538 Found link https://files.pythonhosted.org/packages/0e/90/5ef728a9d2568db1d7e36c9df7af98b5b9d6e8b6a98bf1d3cd3d344ea449/concord_sc-0.9.1.tar.gz (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7), version: 0.9.1 2025-03-17T03:05:53,539 Fetching project page and analyzing links: https://www.piwheels.org/simple/concord-sc/ 2025-03-17T03:05:53,540 Getting page https://www.piwheels.org/simple/concord-sc/ 2025-03-17T03:05:53,541 Found index url https://www.piwheels.org/simple/ 2025-03-17T03:05:53,756 Fetched page https://www.piwheels.org/simple/concord-sc/ as text/html 2025-03-17T03:05:53,758 Skipping link: No binaries permitted for concord-sc: https://www.piwheels.org/simple/concord-sc/concord_sc-0.9.0-py3-none-any.whl#sha256=ef419331e55fc96cb1955de0be8fc00d13975ddc65b2ac9381510e06ff4412d8 (from https://www.piwheels.org/simple/concord-sc/) (requires-python:>=3.7) 2025-03-17T03:05:53,759 Skipping link: not a file: https://www.piwheels.org/simple/concord-sc/ 2025-03-17T03:05:53,759 Skipping link: not a file: https://pypi.org/simple/concord-sc/ 2025-03-17T03:05:53,779 Given no hashes to check 1 links for project 'concord-sc': discarding no candidates 2025-03-17T03:05:53,781 Collecting concord-sc==0.9.1 2025-03-17T03:05:53,783 Created temporary directory: /tmp/pip-unpack-xj9tbo5t 2025-03-17T03:05:54,005 Downloading concord_sc-0.9.1.tar.gz (122 kB) 2025-03-17T03:05:54,221 Added concord-sc==0.9.1 from https://files.pythonhosted.org/packages/0e/90/5ef728a9d2568db1d7e36c9df7af98b5b9d6e8b6a98bf1d3cd3d344ea449/concord_sc-0.9.1.tar.gz to build tracker '/tmp/pip-build-tracker-j5ifdeir' 2025-03-17T03:05:54,223 Running setup.py (path:/tmp/pip-wheel-3iqa4eys/concord-sc_9535f1e61da047fd994e8f787e5ae2f8/setup.py) egg_info for package concord-sc 2025-03-17T03:05:54,224 Created temporary directory: /tmp/pip-pip-egg-info-elhumi59 2025-03-17T03:05:54,224 Preparing metadata (setup.py): started 2025-03-17T03:05:54,226 Running command python setup.py egg_info 2025-03-17T03:05:57,316 running egg_info 2025-03-17T03:05:57,350 creating /tmp/pip-pip-egg-info-elhumi59/concord_sc.egg-info 2025-03-17T03:05:57,352 writing /tmp/pip-pip-egg-info-elhumi59/concord_sc.egg-info/PKG-INFO 2025-03-17T03:05:57,361 writing dependency_links to /tmp/pip-pip-egg-info-elhumi59/concord_sc.egg-info/dependency_links.txt 2025-03-17T03:05:57,372 writing requirements to /tmp/pip-pip-egg-info-elhumi59/concord_sc.egg-info/requires.txt 2025-03-17T03:05:57,374 writing top-level names to /tmp/pip-pip-egg-info-elhumi59/concord_sc.egg-info/top_level.txt 2025-03-17T03:05:57,380 writing manifest file '/tmp/pip-pip-egg-info-elhumi59/concord_sc.egg-info/SOURCES.txt' 2025-03-17T03:05:57,499 reading manifest file '/tmp/pip-pip-egg-info-elhumi59/concord_sc.egg-info/SOURCES.txt' 2025-03-17T03:05:57,509 adding license file 'LICENSE.md' 2025-03-17T03:05:57,513 writing manifest file '/tmp/pip-pip-egg-info-elhumi59/concord_sc.egg-info/SOURCES.txt' 2025-03-17T03:05:57,629 Preparing metadata (setup.py): finished with status 'done' 2025-03-17T03:05:57,635 Source in /tmp/pip-wheel-3iqa4eys/concord-sc_9535f1e61da047fd994e8f787e5ae2f8 has version 0.9.1, which satisfies requirement concord-sc==0.9.1 from https://files.pythonhosted.org/packages/0e/90/5ef728a9d2568db1d7e36c9df7af98b5b9d6e8b6a98bf1d3cd3d344ea449/concord_sc-0.9.1.tar.gz 2025-03-17T03:05:57,636 Removed concord-sc==0.9.1 from https://files.pythonhosted.org/packages/0e/90/5ef728a9d2568db1d7e36c9df7af98b5b9d6e8b6a98bf1d3cd3d344ea449/concord_sc-0.9.1.tar.gz from build tracker '/tmp/pip-build-tracker-j5ifdeir' 2025-03-17T03:05:57,647 Created temporary directory: /tmp/pip-unpack-q6ln6n3w 2025-03-17T03:05:57,648 Created temporary directory: /tmp/pip-unpack-i6xjsdrp 2025-03-17T03:05:57,649 Building wheels for collected packages: concord-sc 2025-03-17T03:05:57,654 Created temporary directory: /tmp/pip-wheel-crssi1kw 2025-03-17T03:05:57,655 Building wheel for concord-sc (setup.py): started 2025-03-17T03:05:57,657 Destination directory: /tmp/pip-wheel-crssi1kw 2025-03-17T03:05:57,657 Running command python setup.py bdist_wheel 2025-03-17T03:05:58,784 running bdist_wheel 2025-03-17T03:05:58,923 running build 2025-03-17T03:05:58,924 running build_py 2025-03-17T03:05:58,956 creating build/lib/concord 2025-03-17T03:05:58,959 copying src/concord/concord.py -> build/lib/concord 2025-03-17T03:05:58,963 copying src/concord/ul.py -> build/lib/concord 2025-03-17T03:05:58,966 copying src/concord/ml.py -> build/lib/concord 2025-03-17T03:05:58,968 copying src/concord/__init__.py -> build/lib/concord 2025-03-17T03:05:58,970 copying src/concord/pl.py -> build/lib/concord 2025-03-17T03:05:58,973 creating build/lib/concord/plotting 2025-03-17T03:05:58,975 copying src/concord/plotting/pl_model.py -> build/lib/concord/plotting 2025-03-17T03:05:58,978 copying src/concord/plotting/pl_general.py -> build/lib/concord/plotting 2025-03-17T03:05:58,980 copying src/concord/plotting/pl_geometry.py -> build/lib/concord/plotting 2025-03-17T03:05:58,982 copying src/concord/plotting/__init__.py -> build/lib/concord/plotting 2025-03-17T03:05:58,985 copying src/concord/plotting/pl_batch.py -> build/lib/concord/plotting 2025-03-17T03:05:58,987 copying src/concord/plotting/pl_heatmap.py -> build/lib/concord/plotting 2025-03-17T03:05:58,990 copying src/concord/plotting/palettes.py -> build/lib/concord/plotting 2025-03-17T03:05:58,993 copying src/concord/plotting/pl_graph.py -> build/lib/concord/plotting 2025-03-17T03:05:58,996 copying src/concord/plotting/pl_embedding.py -> build/lib/concord/plotting 2025-03-17T03:05:59,000 copying src/concord/plotting/pl_tda.py -> build/lib/concord/plotting 2025-03-17T03:05:59,003 copying src/concord/plotting/pl_datacoverage.py -> build/lib/concord/plotting 2025-03-17T03:05:59,005 copying src/concord/plotting/pl_path.py -> build/lib/concord/plotting 2025-03-17T03:05:59,007 copying src/concord/plotting/pl_benchmark.py -> build/lib/concord/plotting 2025-03-17T03:05:59,010 copying src/concord/plotting/pl_enrichment.py -> build/lib/concord/plotting 2025-03-17T03:05:59,015 creating build/lib/concord/utils 2025-03-17T03:05:59,016 copying src/concord/utils/feature_selector.py -> build/lib/concord/utils 2025-03-17T03:05:59,020 copying src/concord/utils/cellxgene.py -> build/lib/concord/utils 2025-03-17T03:05:59,022 copying src/concord/utils/tda.py -> build/lib/concord/utils 2025-03-17T03:05:59,025 copying src/concord/utils/importance_analysis.py -> build/lib/concord/utils 2025-03-17T03:05:59,027 copying src/concord/utils/timer.py -> build/lib/concord/utils 2025-03-17T03:05:59,029 copying src/concord/utils/path_analysis.py -> build/lib/concord/utils 2025-03-17T03:05:59,032 copying src/concord/utils/simulation.py -> build/lib/concord/utils 2025-03-17T03:05:59,036 copying src/concord/utils/run_dim_reduction.py -> build/lib/concord/utils 2025-03-17T03:05:59,039 copying src/concord/utils/run_integration_methods.py -> build/lib/concord/utils 2025-03-17T03:05:59,042 copying src/concord/utils/value_check.py -> build/lib/concord/utils 2025-03-17T03:05:59,044 copying src/concord/utils/anndata_utils.py -> build/lib/concord/utils 2025-03-17T03:05:59,047 copying src/concord/utils/io.py -> build/lib/concord/utils 2025-03-17T03:05:59,049 copying src/concord/utils/__init__.py -> build/lib/concord/utils 2025-03-17T03:05:59,052 copying src/concord/utils/doublet_utils.py -> build/lib/concord/utils 2025-03-17T03:05:59,055 copying src/concord/utils/geometry.py -> build/lib/concord/utils 2025-03-17T03:05:59,058 copying src/concord/utils/batch_analysis.py -> build/lib/concord/utils 2025-03-17T03:05:59,060 copying src/concord/utils/sparsity.py -> build/lib/concord/utils 2025-03-17T03:05:59,063 copying src/concord/utils/preprocessor.py -> build/lib/concord/utils 2025-03-17T03:05:59,066 copying src/concord/utils/Hs_Mm_conversion.py -> build/lib/concord/utils 2025-03-17T03:05:59,068 copying src/concord/utils/evaluator.py -> build/lib/concord/utils 2025-03-17T03:05:59,070 copying src/concord/utils/enrichment_analysis.py -> build/lib/concord/utils 2025-03-17T03:05:59,073 copying src/concord/utils/visCello.py -> build/lib/concord/utils 2025-03-17T03:05:59,076 copying src/concord/utils/benchmark.py -> build/lib/concord/utils 2025-03-17T03:05:59,079 copying src/concord/utils/other_util.py -> build/lib/concord/utils 2025-03-17T03:05:59,082 copying src/concord/utils/estimate_aug_mask_prob.py -> build/lib/concord/utils 2025-03-17T03:05:59,084 copying src/concord/utils/coverage_estimator.py -> build/lib/concord/utils 2025-03-17T03:05:59,086 copying src/concord/utils/cell_cycle.py -> build/lib/concord/utils 2025-03-17T03:05:59,089 creating build/lib/concord/model 2025-03-17T03:05:59,090 copying src/concord/model/loss.py -> build/lib/concord/model 2025-03-17T03:05:59,093 copying src/concord/model/anndataset.py -> build/lib/concord/model 2025-03-17T03:05:59,096 copying src/concord/model/chunkloader.py -> build/lib/concord/model 2025-03-17T03:05:59,098 copying src/concord/model/knn.py -> build/lib/concord/model 2025-03-17T03:05:59,111 copying src/concord/model/__init__.py -> build/lib/concord/model 2025-03-17T03:05:59,113 copying src/concord/model/dataloader.py -> build/lib/concord/model 2025-03-17T03:05:59,116 copying src/concord/model/build_layer.py -> build/lib/concord/model 2025-03-17T03:05:59,118 copying src/concord/model/sampler.py -> build/lib/concord/model 2025-03-17T03:05:59,121 copying src/concord/model/trainer.py -> build/lib/concord/model 2025-03-17T03:05:59,124 copying src/concord/model/model.py -> build/lib/concord/model 2025-03-17T03:05:59,160 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-03-17T03:05:59,160 !! 2025-03-17T03:05:59,162 ******************************************************************************** 2025-03-17T03:05:59,162 Please avoid running ``setup.py`` directly. 2025-03-17T03:05:59,163 Instead, use pypa/build, pypa/installer or other 2025-03-17T03:05:59,163 standards-based tools. 2025-03-17T03:05:59,164 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-03-17T03:05:59,165 ******************************************************************************** 2025-03-17T03:05:59,166 !! 2025-03-17T03:05:59,167 self.initialize_options() 2025-03-17T03:05:59,187 installing to build/bdist.linux-armv7l/wheel 2025-03-17T03:05:59,188 running install 2025-03-17T03:05:59,212 running install_lib 2025-03-17T03:05:59,238 creating build/bdist.linux-armv7l/wheel 2025-03-17T03:05:59,241 creating build/bdist.linux-armv7l/wheel/concord 2025-03-17T03:05:59,242 copying build/lib/concord/concord.py -> build/bdist.linux-armv7l/wheel/./concord 2025-03-17T03:05:59,245 copying build/lib/concord/ul.py -> build/bdist.linux-armv7l/wheel/./concord 2025-03-17T03:05:59,246 copying build/lib/concord/ml.py -> build/bdist.linux-armv7l/wheel/./concord 2025-03-17T03:05:59,249 creating build/bdist.linux-armv7l/wheel/concord/plotting 2025-03-17T03:05:59,250 copying build/lib/concord/plotting/pl_model.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,253 copying build/lib/concord/plotting/pl_general.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,254 copying build/lib/concord/plotting/pl_geometry.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,257 copying build/lib/concord/plotting/__init__.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,259 copying build/lib/concord/plotting/pl_batch.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,261 copying build/lib/concord/plotting/pl_heatmap.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,263 copying build/lib/concord/plotting/palettes.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,265 copying build/lib/concord/plotting/pl_graph.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,268 copying build/lib/concord/plotting/pl_embedding.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,271 copying build/lib/concord/plotting/pl_tda.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,273 copying build/lib/concord/plotting/pl_datacoverage.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,275 copying build/lib/concord/plotting/pl_path.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,277 copying build/lib/concord/plotting/pl_benchmark.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,279 copying build/lib/concord/plotting/pl_enrichment.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T03:05:59,282 copying build/lib/concord/__init__.py -> build/bdist.linux-armv7l/wheel/./concord 2025-03-17T03:05:59,284 copying build/lib/concord/pl.py -> build/bdist.linux-armv7l/wheel/./concord 2025-03-17T03:05:59,286 creating build/bdist.linux-armv7l/wheel/concord/utils 2025-03-17T03:05:59,287 copying build/lib/concord/utils/feature_selector.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,290 copying build/lib/concord/utils/cellxgene.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,292 copying build/lib/concord/utils/tda.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,294 copying build/lib/concord/utils/importance_analysis.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,297 copying build/lib/concord/utils/timer.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,298 copying build/lib/concord/utils/path_analysis.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,301 copying build/lib/concord/utils/simulation.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,304 copying build/lib/concord/utils/run_dim_reduction.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,306 copying build/lib/concord/utils/run_integration_methods.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,309 copying build/lib/concord/utils/value_check.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,311 copying build/lib/concord/utils/anndata_utils.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,313 copying build/lib/concord/utils/io.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,315 copying build/lib/concord/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,317 copying build/lib/concord/utils/doublet_utils.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,319 copying build/lib/concord/utils/geometry.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,321 copying build/lib/concord/utils/batch_analysis.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,323 copying build/lib/concord/utils/sparsity.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,325 copying build/lib/concord/utils/preprocessor.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,327 copying build/lib/concord/utils/Hs_Mm_conversion.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,329 copying build/lib/concord/utils/evaluator.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,331 copying build/lib/concord/utils/enrichment_analysis.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,333 copying build/lib/concord/utils/visCello.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,335 copying build/lib/concord/utils/benchmark.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,338 copying build/lib/concord/utils/other_util.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,340 copying build/lib/concord/utils/estimate_aug_mask_prob.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,342 copying build/lib/concord/utils/coverage_estimator.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,343 copying build/lib/concord/utils/cell_cycle.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T03:05:59,346 creating build/bdist.linux-armv7l/wheel/concord/model 2025-03-17T03:05:59,347 copying build/lib/concord/model/loss.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T03:05:59,349 copying build/lib/concord/model/anndataset.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T03:05:59,352 copying build/lib/concord/model/chunkloader.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T03:05:59,354 copying build/lib/concord/model/knn.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T03:05:59,357 copying build/lib/concord/model/__init__.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T03:05:59,358 copying build/lib/concord/model/dataloader.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T03:05:59,361 copying build/lib/concord/model/build_layer.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T03:05:59,363 copying build/lib/concord/model/sampler.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T03:05:59,365 copying build/lib/concord/model/trainer.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T03:05:59,368 copying build/lib/concord/model/model.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T03:05:59,370 running install_egg_info 2025-03-17T03:05:59,403 running egg_info 2025-03-17T03:05:59,430 writing src/concord_sc.egg-info/PKG-INFO 2025-03-17T03:05:59,435 writing dependency_links to src/concord_sc.egg-info/dependency_links.txt 2025-03-17T03:05:59,439 writing requirements to src/concord_sc.egg-info/requires.txt 2025-03-17T03:05:59,441 writing top-level names to src/concord_sc.egg-info/top_level.txt 2025-03-17T03:05:59,474 reading manifest file 'src/concord_sc.egg-info/SOURCES.txt' 2025-03-17T03:05:59,479 adding license file 'LICENSE.md' 2025-03-17T03:05:59,484 writing manifest file 'src/concord_sc.egg-info/SOURCES.txt' 2025-03-17T03:05:59,486 Copying src/concord_sc.egg-info to build/bdist.linux-armv7l/wheel/./concord_sc-0.9.1-py3.11.egg-info 2025-03-17T03:05:59,496 running install_scripts 2025-03-17T03:05:59,516 creating build/bdist.linux-armv7l/wheel/concord_sc-0.9.1.dist-info/WHEEL 2025-03-17T03:05:59,519 creating '/tmp/pip-wheel-crssi1kw/concord_sc-0.9.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-03-17T03:05:59,521 adding 'concord/__init__.py' 2025-03-17T03:05:59,525 adding 'concord/concord.py' 2025-03-17T03:05:59,526 adding 'concord/ml.py' 2025-03-17T03:05:59,527 adding 'concord/pl.py' 2025-03-17T03:05:59,529 adding 'concord/ul.py' 2025-03-17T03:05:59,531 adding 'concord/model/__init__.py' 2025-03-17T03:05:59,532 adding 'concord/model/anndataset.py' 2025-03-17T03:05:59,534 adding 'concord/model/build_layer.py' 2025-03-17T03:05:59,535 adding 'concord/model/chunkloader.py' 2025-03-17T03:05:59,537 adding 'concord/model/dataloader.py' 2025-03-17T03:05:59,540 adding 'concord/model/knn.py' 2025-03-17T03:05:59,541 adding 'concord/model/loss.py' 2025-03-17T03:05:59,543 adding 'concord/model/model.py' 2025-03-17T03:05:59,545 adding 'concord/model/sampler.py' 2025-03-17T03:05:59,547 adding 'concord/model/trainer.py' 2025-03-17T03:05:59,549 adding 'concord/plotting/__init__.py' 2025-03-17T03:05:59,550 adding 'concord/plotting/palettes.py' 2025-03-17T03:05:59,552 adding 'concord/plotting/pl_batch.py' 2025-03-17T03:05:59,554 adding 'concord/plotting/pl_benchmark.py' 2025-03-17T03:05:59,555 adding 'concord/plotting/pl_datacoverage.py' 2025-03-17T03:05:59,560 adding 'concord/plotting/pl_embedding.py' 2025-03-17T03:05:59,562 adding 'concord/plotting/pl_enrichment.py' 2025-03-17T03:05:59,564 adding 'concord/plotting/pl_general.py' 2025-03-17T03:05:59,566 adding 'concord/plotting/pl_geometry.py' 2025-03-17T03:05:59,568 adding 'concord/plotting/pl_graph.py' 2025-03-17T03:05:59,571 adding 'concord/plotting/pl_heatmap.py' 2025-03-17T03:05:59,572 adding 'concord/plotting/pl_model.py' 2025-03-17T03:05:59,574 adding 'concord/plotting/pl_path.py' 2025-03-17T03:05:59,576 adding 'concord/plotting/pl_tda.py' 2025-03-17T03:05:59,578 adding 'concord/utils/Hs_Mm_conversion.py' 2025-03-17T03:05:59,580 adding 'concord/utils/__init__.py' 2025-03-17T03:05:59,582 adding 'concord/utils/anndata_utils.py' 2025-03-17T03:05:59,583 adding 'concord/utils/batch_analysis.py' 2025-03-17T03:05:59,586 adding 'concord/utils/benchmark.py' 2025-03-17T03:05:59,588 adding 'concord/utils/cell_cycle.py' 2025-03-17T03:05:59,589 adding 'concord/utils/cellxgene.py' 2025-03-17T03:05:59,591 adding 'concord/utils/coverage_estimator.py' 2025-03-17T03:05:59,592 adding 'concord/utils/doublet_utils.py' 2025-03-17T03:05:59,594 adding 'concord/utils/enrichment_analysis.py' 2025-03-17T03:05:59,595 adding 'concord/utils/estimate_aug_mask_prob.py' 2025-03-17T03:05:59,596 adding 'concord/utils/evaluator.py' 2025-03-17T03:05:59,598 adding 'concord/utils/feature_selector.py' 2025-03-17T03:05:59,600 adding 'concord/utils/geometry.py' 2025-03-17T03:05:59,602 adding 'concord/utils/importance_analysis.py' 2025-03-17T03:05:59,603 adding 'concord/utils/io.py' 2025-03-17T03:05:59,605 adding 'concord/utils/other_util.py' 2025-03-17T03:05:59,606 adding 'concord/utils/path_analysis.py' 2025-03-17T03:05:59,608 adding 'concord/utils/preprocessor.py' 2025-03-17T03:05:59,610 adding 'concord/utils/run_dim_reduction.py' 2025-03-17T03:05:59,612 adding 'concord/utils/run_integration_methods.py' 2025-03-17T03:05:59,618 adding 'concord/utils/simulation.py' 2025-03-17T03:05:59,619 adding 'concord/utils/sparsity.py' 2025-03-17T03:05:59,621 adding 'concord/utils/tda.py' 2025-03-17T03:05:59,623 adding 'concord/utils/timer.py' 2025-03-17T03:05:59,624 adding 'concord/utils/value_check.py' 2025-03-17T03:05:59,626 adding 'concord/utils/visCello.py' 2025-03-17T03:05:59,628 adding 'concord_sc-0.9.1.dist-info/LICENSE.md' 2025-03-17T03:05:59,630 adding 'concord_sc-0.9.1.dist-info/METADATA' 2025-03-17T03:05:59,631 adding 'concord_sc-0.9.1.dist-info/WHEEL' 2025-03-17T03:05:59,632 adding 'concord_sc-0.9.1.dist-info/top_level.txt' 2025-03-17T03:05:59,633 adding 'concord_sc-0.9.1.dist-info/RECORD' 2025-03-17T03:05:59,636 removing build/bdist.linux-armv7l/wheel 2025-03-17T03:05:59,764 Building wheel for concord-sc (setup.py): finished with status 'done' 2025-03-17T03:05:59,769 Created wheel for concord-sc: filename=concord_sc-0.9.1-py3-none-any.whl size=139870 sha256=3c3bb2a442ae740b18ca16a7516ab62e95c70d1f9d72ff7aa73af475afd0a252 2025-03-17T03:05:59,770 Stored in directory: /tmp/pip-ephem-wheel-cache-0u5cat96/wheels/b6/13/f6/5377aaf7e21d9f071d852f24e8cca0e810aa8d7b9651feca57 2025-03-17T03:05:59,784 Successfully built concord-sc 2025-03-17T03:05:59,840 Removed build tracker: '/tmp/pip-build-tracker-j5ifdeir'