2025-03-17T06:19:19,758 Created temporary directory: /tmp/pip-build-tracker-ycf6an83 2025-03-17T06:19:19,773 Initialized build tracking at /tmp/pip-build-tracker-ycf6an83 2025-03-17T06:19:19,774 Created build tracker: /tmp/pip-build-tracker-ycf6an83 2025-03-17T06:19:19,775 Entered build tracker: /tmp/pip-build-tracker-ycf6an83 2025-03-17T06:19:19,792 Created temporary directory: /tmp/pip-wheel-hmtxrwzj 2025-03-17T06:19:19,801 Created temporary directory: /tmp/pip-ephem-wheel-cache-wckau13i 2025-03-17T06:19:20,064 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-03-17T06:19:20,386 2 location(s) to search for versions of concord-sc: 2025-03-17T06:19:20,386 * https://pypi.org/simple/concord-sc/ 2025-03-17T06:19:20,386 * https://www.piwheels.org/simple/concord-sc/ 2025-03-17T06:19:20,388 Fetching project page and analyzing links: https://pypi.org/simple/concord-sc/ 2025-03-17T06:19:20,390 Getting page https://pypi.org/simple/concord-sc/ 2025-03-17T06:19:20,393 Found index url https://pypi.org/simple/ 2025-03-17T06:19:21,140 Fetched page https://pypi.org/simple/concord-sc/ as application/vnd.pypi.simple.v1+json 2025-03-17T06:19:21,151 Skipping link: No binaries permitted for concord-sc: https://files.pythonhosted.org/packages/8e/ae/22e0b7b29b9c9c1a4ba16c91c5017059a7e48367aa4aaa9568e5cb525092/concord_sc-0.9.0-py3-none-any.whl (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7) 2025-03-17T06:19:21,153 Found link https://files.pythonhosted.org/packages/10/58/79f4033f7fbc06d0c2c0a78ddb77debf2bee47eb6f914cadb8a00095e429/concord_sc-0.9.0.tar.gz (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7), version: 0.9.0 2025-03-17T06:19:21,154 Skipping link: No binaries permitted for concord-sc: https://files.pythonhosted.org/packages/4d/ab/8b89e30462620a4338e2337127525d69413ed90b969bcc61264c0b547e96/concord_sc-0.9.1-py3-none-any.whl (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7) 2025-03-17T06:19:21,155 Found link https://files.pythonhosted.org/packages/0e/90/5ef728a9d2568db1d7e36c9df7af98b5b9d6e8b6a98bf1d3cd3d344ea449/concord_sc-0.9.1.tar.gz (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7), version: 0.9.1 2025-03-17T06:19:21,156 Skipping link: No binaries permitted for concord-sc: https://files.pythonhosted.org/packages/39/b3/6918c9ca5f3046e2bba415b978bc22d537cfd9c2a908b2489e4e3048d776/concord_sc-0.9.2-py3-none-any.whl (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7) 2025-03-17T06:19:21,157 Found link https://files.pythonhosted.org/packages/55/01/1c16f7a11b80cc77bee4e5ed0827137b4e2e074a9668c0b44150d48afe74/concord_sc-0.9.2.tar.gz (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7), version: 0.9.2 2025-03-17T06:19:21,158 Skipping link: No binaries permitted for concord-sc: https://files.pythonhosted.org/packages/fb/f3/a0d8a696c17ad8aa9d3b89416e1938a05fe1d476d9a157a1ca88671d6bb1/concord_sc-0.9.3-py3-none-any.whl (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7) 2025-03-17T06:19:21,159 Found link https://files.pythonhosted.org/packages/5b/40/2ec491724912d89c649155e8dbf06c4828fc6153a1b4fc56632e34302715/concord_sc-0.9.3.tar.gz (from https://pypi.org/simple/concord-sc/) (requires-python:>=3.7), version: 0.9.3 2025-03-17T06:19:21,160 Fetching project page and analyzing links: https://www.piwheels.org/simple/concord-sc/ 2025-03-17T06:19:21,161 Getting page https://www.piwheels.org/simple/concord-sc/ 2025-03-17T06:19:21,162 Found index url https://www.piwheels.org/simple/ 2025-03-17T06:19:24,296 Fetched page https://www.piwheels.org/simple/concord-sc/ as text/html 2025-03-17T06:19:24,300 Skipping link: No binaries permitted for concord-sc: https://www.piwheels.org/simple/concord-sc/concord_sc-0.9.2-py3-none-any.whl#sha256=2263638f4ef6f3e6df29d54592c25736b9a14216e330e882a6388719764b7cc9 (from https://www.piwheels.org/simple/concord-sc/) (requires-python:>=3.7) 2025-03-17T06:19:24,301 Skipping link: No binaries permitted for concord-sc: https://www.piwheels.org/simple/concord-sc/concord_sc-0.9.1-py3-none-any.whl#sha256=3c3bb2a442ae740b18ca16a7516ab62e95c70d1f9d72ff7aa73af475afd0a252 (from https://www.piwheels.org/simple/concord-sc/) (requires-python:>=3.7) 2025-03-17T06:19:24,302 Skipping link: No binaries permitted for concord-sc: https://www.piwheels.org/simple/concord-sc/concord_sc-0.9.0-py3-none-any.whl#sha256=ef419331e55fc96cb1955de0be8fc00d13975ddc65b2ac9381510e06ff4412d8 (from https://www.piwheels.org/simple/concord-sc/) (requires-python:>=3.7) 2025-03-17T06:19:24,304 Skipping link: not a file: https://www.piwheels.org/simple/concord-sc/ 2025-03-17T06:19:24,305 Skipping link: not a file: https://pypi.org/simple/concord-sc/ 2025-03-17T06:19:24,354 Given no hashes to check 1 links for project 'concord-sc': discarding no candidates 2025-03-17T06:19:24,357 Collecting concord-sc==0.9.3 2025-03-17T06:19:24,361 Created temporary directory: /tmp/pip-unpack-lsk1nerm 2025-03-17T06:19:24,512 Downloading concord_sc-0.9.3.tar.gz (122 kB) 2025-03-17T06:19:24,726 Added concord-sc==0.9.3 from https://files.pythonhosted.org/packages/5b/40/2ec491724912d89c649155e8dbf06c4828fc6153a1b4fc56632e34302715/concord_sc-0.9.3.tar.gz to build tracker '/tmp/pip-build-tracker-ycf6an83' 2025-03-17T06:19:24,728 Running setup.py (path:/tmp/pip-wheel-hmtxrwzj/concord-sc_0017f587ef9042fda0775862ac568ff1/setup.py) egg_info for package concord-sc 2025-03-17T06:19:24,729 Created temporary directory: /tmp/pip-pip-egg-info-omqtgnrz 2025-03-17T06:19:24,729 Preparing metadata (setup.py): started 2025-03-17T06:19:24,731 Running command python setup.py egg_info 2025-03-17T06:19:25,842 running egg_info 2025-03-17T06:19:25,871 creating /tmp/pip-pip-egg-info-omqtgnrz/concord_sc.egg-info 2025-03-17T06:19:25,872 writing /tmp/pip-pip-egg-info-omqtgnrz/concord_sc.egg-info/PKG-INFO 2025-03-17T06:19:25,878 writing dependency_links to /tmp/pip-pip-egg-info-omqtgnrz/concord_sc.egg-info/dependency_links.txt 2025-03-17T06:19:25,882 writing requirements to /tmp/pip-pip-egg-info-omqtgnrz/concord_sc.egg-info/requires.txt 2025-03-17T06:19:25,883 writing top-level names to /tmp/pip-pip-egg-info-omqtgnrz/concord_sc.egg-info/top_level.txt 2025-03-17T06:19:25,885 writing manifest file '/tmp/pip-pip-egg-info-omqtgnrz/concord_sc.egg-info/SOURCES.txt' 2025-03-17T06:19:25,976 reading manifest file '/tmp/pip-pip-egg-info-omqtgnrz/concord_sc.egg-info/SOURCES.txt' 2025-03-17T06:19:25,978 adding license file 'LICENSE.md' 2025-03-17T06:19:25,982 writing manifest file '/tmp/pip-pip-egg-info-omqtgnrz/concord_sc.egg-info/SOURCES.txt' 2025-03-17T06:19:26,092 Preparing metadata (setup.py): finished with status 'done' 2025-03-17T06:19:26,096 Source in /tmp/pip-wheel-hmtxrwzj/concord-sc_0017f587ef9042fda0775862ac568ff1 has version 0.9.3, which satisfies requirement concord-sc==0.9.3 from https://files.pythonhosted.org/packages/5b/40/2ec491724912d89c649155e8dbf06c4828fc6153a1b4fc56632e34302715/concord_sc-0.9.3.tar.gz 2025-03-17T06:19:26,097 Removed concord-sc==0.9.3 from https://files.pythonhosted.org/packages/5b/40/2ec491724912d89c649155e8dbf06c4828fc6153a1b4fc56632e34302715/concord_sc-0.9.3.tar.gz from build tracker '/tmp/pip-build-tracker-ycf6an83' 2025-03-17T06:19:26,109 Created temporary directory: /tmp/pip-unpack-kizhn0tv 2025-03-17T06:19:26,110 Created temporary directory: /tmp/pip-unpack-oua_yh1o 2025-03-17T06:19:26,110 Building wheels for collected packages: concord-sc 2025-03-17T06:19:26,115 Created temporary directory: /tmp/pip-wheel-u2je3kud 2025-03-17T06:19:26,116 Building wheel for concord-sc (setup.py): started 2025-03-17T06:19:26,117 Destination directory: /tmp/pip-wheel-u2je3kud 2025-03-17T06:19:26,117 Running command python setup.py bdist_wheel 2025-03-17T06:19:27,168 running bdist_wheel 2025-03-17T06:19:27,301 running build 2025-03-17T06:19:27,301 running build_py 2025-03-17T06:19:27,331 creating build/lib/concord 2025-03-17T06:19:27,334 copying src/concord/ul.py -> build/lib/concord 2025-03-17T06:19:27,336 copying src/concord/ml.py -> build/lib/concord 2025-03-17T06:19:27,338 copying src/concord/__init__.py -> build/lib/concord 2025-03-17T06:19:27,341 copying src/concord/pl.py -> build/lib/concord 2025-03-17T06:19:27,343 copying src/concord/concord.py -> build/lib/concord 2025-03-17T06:19:27,347 creating build/lib/concord/utils 2025-03-17T06:19:27,348 copying src/concord/utils/benchmark.py -> build/lib/concord/utils 2025-03-17T06:19:27,351 copying src/concord/utils/preprocessor.py -> build/lib/concord/utils 2025-03-17T06:19:27,354 copying src/concord/utils/__init__.py -> build/lib/concord/utils 2025-03-17T06:19:27,356 copying src/concord/utils/evaluator.py -> build/lib/concord/utils 2025-03-17T06:19:27,358 copying src/concord/utils/other_util.py -> build/lib/concord/utils 2025-03-17T06:19:27,359 copying src/concord/utils/visCello.py -> build/lib/concord/utils 2025-03-17T06:19:27,362 copying src/concord/utils/importance_analysis.py -> build/lib/concord/utils 2025-03-17T06:19:27,364 copying src/concord/utils/path_analysis.py -> build/lib/concord/utils 2025-03-17T06:19:27,366 copying src/concord/utils/run_dim_reduction.py -> build/lib/concord/utils 2025-03-17T06:19:27,369 copying src/concord/utils/estimate_aug_mask_prob.py -> build/lib/concord/utils 2025-03-17T06:19:27,371 copying src/concord/utils/cell_cycle.py -> build/lib/concord/utils 2025-03-17T06:19:27,373 copying src/concord/utils/io.py -> build/lib/concord/utils 2025-03-17T06:19:27,376 copying src/concord/utils/enrichment_analysis.py -> build/lib/concord/utils 2025-03-17T06:19:27,378 copying src/concord/utils/tda.py -> build/lib/concord/utils 2025-03-17T06:19:27,380 copying src/concord/utils/timer.py -> build/lib/concord/utils 2025-03-17T06:19:27,382 copying src/concord/utils/anndata_utils.py -> build/lib/concord/utils 2025-03-17T06:19:27,385 copying src/concord/utils/cellxgene.py -> build/lib/concord/utils 2025-03-17T06:19:27,387 copying src/concord/utils/run_integration_methods.py -> build/lib/concord/utils 2025-03-17T06:19:27,389 copying src/concord/utils/simulation.py -> build/lib/concord/utils 2025-03-17T06:19:27,392 copying src/concord/utils/feature_selector.py -> build/lib/concord/utils 2025-03-17T06:19:27,395 copying src/concord/utils/coverage_estimator.py -> build/lib/concord/utils 2025-03-17T06:19:27,397 copying src/concord/utils/Hs_Mm_conversion.py -> build/lib/concord/utils 2025-03-17T06:19:27,400 copying src/concord/utils/sparsity.py -> build/lib/concord/utils 2025-03-17T06:19:27,402 copying src/concord/utils/doublet_utils.py -> build/lib/concord/utils 2025-03-17T06:19:27,404 copying src/concord/utils/batch_analysis.py -> build/lib/concord/utils 2025-03-17T06:19:27,407 copying src/concord/utils/value_check.py -> build/lib/concord/utils 2025-03-17T06:19:27,409 copying src/concord/utils/geometry.py -> build/lib/concord/utils 2025-03-17T06:19:27,412 creating build/lib/concord/model 2025-03-17T06:19:27,414 copying src/concord/model/chunkloader.py -> build/lib/concord/model 2025-03-17T06:19:27,417 copying src/concord/model/loss.py -> build/lib/concord/model 2025-03-17T06:19:27,419 copying src/concord/model/__init__.py -> build/lib/concord/model 2025-03-17T06:19:27,422 copying src/concord/model/trainer.py -> build/lib/concord/model 2025-03-17T06:19:27,424 copying src/concord/model/sampler.py -> build/lib/concord/model 2025-03-17T06:19:27,427 copying src/concord/model/model.py -> build/lib/concord/model 2025-03-17T06:19:27,430 copying src/concord/model/anndataset.py -> build/lib/concord/model 2025-03-17T06:19:27,433 copying src/concord/model/dataloader.py -> build/lib/concord/model 2025-03-17T06:19:27,436 copying src/concord/model/knn.py -> build/lib/concord/model 2025-03-17T06:19:27,438 copying src/concord/model/build_layer.py -> build/lib/concord/model 2025-03-17T06:19:27,442 creating build/lib/concord/plotting 2025-03-17T06:19:27,443 copying src/concord/plotting/pl_benchmark.py -> build/lib/concord/plotting 2025-03-17T06:19:27,446 copying src/concord/plotting/pl_enrichment.py -> build/lib/concord/plotting 2025-03-17T06:19:27,449 copying src/concord/plotting/palettes.py -> build/lib/concord/plotting 2025-03-17T06:19:27,451 copying src/concord/plotting/pl_tda.py -> build/lib/concord/plotting 2025-03-17T06:19:27,454 copying src/concord/plotting/pl_graph.py -> build/lib/concord/plotting 2025-03-17T06:19:27,457 copying src/concord/plotting/pl_heatmap.py -> build/lib/concord/plotting 2025-03-17T06:19:27,460 copying src/concord/plotting/pl_geometry.py -> build/lib/concord/plotting 2025-03-17T06:19:27,463 copying src/concord/plotting/__init__.py -> build/lib/concord/plotting 2025-03-17T06:19:27,465 copying src/concord/plotting/pl_embedding.py -> build/lib/concord/plotting 2025-03-17T06:19:27,469 copying src/concord/plotting/pl_model.py -> build/lib/concord/plotting 2025-03-17T06:19:27,472 copying src/concord/plotting/pl_datacoverage.py -> build/lib/concord/plotting 2025-03-17T06:19:27,474 copying src/concord/plotting/pl_path.py -> build/lib/concord/plotting 2025-03-17T06:19:27,476 copying src/concord/plotting/pl_batch.py -> build/lib/concord/plotting 2025-03-17T06:19:27,479 copying src/concord/plotting/pl_general.py -> build/lib/concord/plotting 2025-03-17T06:19:27,515 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-03-17T06:19:27,516 !! 2025-03-17T06:19:27,517 ******************************************************************************** 2025-03-17T06:19:27,517 Please avoid running ``setup.py`` directly. 2025-03-17T06:19:27,518 Instead, use pypa/build, pypa/installer or other 2025-03-17T06:19:27,518 standards-based tools. 2025-03-17T06:19:27,519 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-03-17T06:19:27,520 ******************************************************************************** 2025-03-17T06:19:27,521 !! 2025-03-17T06:19:27,521 self.initialize_options() 2025-03-17T06:19:27,547 installing to build/bdist.linux-armv7l/wheel 2025-03-17T06:19:27,547 running install 2025-03-17T06:19:27,572 running install_lib 2025-03-17T06:19:27,600 creating build/bdist.linux-armv7l/wheel 2025-03-17T06:19:27,602 creating build/bdist.linux-armv7l/wheel/concord 2025-03-17T06:19:27,604 copying build/lib/concord/ul.py -> build/bdist.linux-armv7l/wheel/./concord 2025-03-17T06:19:27,607 creating build/bdist.linux-armv7l/wheel/concord/utils 2025-03-17T06:19:27,609 copying build/lib/concord/utils/benchmark.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,613 copying build/lib/concord/utils/preprocessor.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,615 copying build/lib/concord/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,618 copying build/lib/concord/utils/evaluator.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,620 copying build/lib/concord/utils/other_util.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,623 copying build/lib/concord/utils/visCello.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,625 copying build/lib/concord/utils/importance_analysis.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,627 copying build/lib/concord/utils/path_analysis.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,630 copying build/lib/concord/utils/run_dim_reduction.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,632 copying build/lib/concord/utils/estimate_aug_mask_prob.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,634 copying build/lib/concord/utils/cell_cycle.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,636 copying build/lib/concord/utils/io.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,638 copying build/lib/concord/utils/enrichment_analysis.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,641 copying build/lib/concord/utils/tda.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,643 copying build/lib/concord/utils/timer.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,645 copying build/lib/concord/utils/anndata_utils.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,647 copying build/lib/concord/utils/cellxgene.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,649 copying build/lib/concord/utils/run_integration_methods.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,651 copying build/lib/concord/utils/simulation.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,654 copying build/lib/concord/utils/feature_selector.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,657 copying build/lib/concord/utils/coverage_estimator.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,659 copying build/lib/concord/utils/Hs_Mm_conversion.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,661 copying build/lib/concord/utils/sparsity.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,663 copying build/lib/concord/utils/doublet_utils.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,666 copying build/lib/concord/utils/batch_analysis.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,668 copying build/lib/concord/utils/value_check.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,670 copying build/lib/concord/utils/geometry.py -> build/bdist.linux-armv7l/wheel/./concord/utils 2025-03-17T06:19:27,673 copying build/lib/concord/ml.py -> build/bdist.linux-armv7l/wheel/./concord 2025-03-17T06:19:27,675 copying build/lib/concord/__init__.py -> build/bdist.linux-armv7l/wheel/./concord 2025-03-17T06:19:27,678 creating build/bdist.linux-armv7l/wheel/concord/model 2025-03-17T06:19:27,680 copying build/lib/concord/model/chunkloader.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T06:19:27,683 copying build/lib/concord/model/loss.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T06:19:27,685 copying build/lib/concord/model/__init__.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T06:19:27,687 copying build/lib/concord/model/trainer.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T06:19:27,690 copying build/lib/concord/model/sampler.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T06:19:27,693 copying build/lib/concord/model/model.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T06:19:27,695 copying build/lib/concord/model/anndataset.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T06:19:27,698 copying build/lib/concord/model/dataloader.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T06:19:27,701 copying build/lib/concord/model/knn.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T06:19:27,703 copying build/lib/concord/model/build_layer.py -> build/bdist.linux-armv7l/wheel/./concord/model 2025-03-17T06:19:27,705 copying build/lib/concord/pl.py -> build/bdist.linux-armv7l/wheel/./concord 2025-03-17T06:19:27,707 copying build/lib/concord/concord.py -> build/bdist.linux-armv7l/wheel/./concord 2025-03-17T06:19:27,710 creating build/bdist.linux-armv7l/wheel/concord/plotting 2025-03-17T06:19:27,711 copying build/lib/concord/plotting/pl_benchmark.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,714 copying build/lib/concord/plotting/pl_enrichment.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,717 copying build/lib/concord/plotting/palettes.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,719 copying build/lib/concord/plotting/pl_tda.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,721 copying build/lib/concord/plotting/pl_graph.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,724 copying build/lib/concord/plotting/pl_heatmap.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,727 copying build/lib/concord/plotting/pl_geometry.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,729 copying build/lib/concord/plotting/__init__.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,731 copying build/lib/concord/plotting/pl_embedding.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,734 copying build/lib/concord/plotting/pl_model.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,736 copying build/lib/concord/plotting/pl_datacoverage.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,738 copying build/lib/concord/plotting/pl_path.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,740 copying build/lib/concord/plotting/pl_batch.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,742 copying build/lib/concord/plotting/pl_general.py -> build/bdist.linux-armv7l/wheel/./concord/plotting 2025-03-17T06:19:27,743 running install_egg_info 2025-03-17T06:19:27,776 running egg_info 2025-03-17T06:19:27,803 writing src/concord_sc.egg-info/PKG-INFO 2025-03-17T06:19:27,809 writing dependency_links to src/concord_sc.egg-info/dependency_links.txt 2025-03-17T06:19:27,813 writing requirements to src/concord_sc.egg-info/requires.txt 2025-03-17T06:19:27,814 writing top-level names to src/concord_sc.egg-info/top_level.txt 2025-03-17T06:19:27,848 reading manifest file 'src/concord_sc.egg-info/SOURCES.txt' 2025-03-17T06:19:27,853 adding license file 'LICENSE.md' 2025-03-17T06:19:27,858 writing manifest file 'src/concord_sc.egg-info/SOURCES.txt' 2025-03-17T06:19:27,859 Copying src/concord_sc.egg-info to build/bdist.linux-armv7l/wheel/./concord_sc-0.9.3-py3.11.egg-info 2025-03-17T06:19:27,870 running install_scripts 2025-03-17T06:19:27,890 creating build/bdist.linux-armv7l/wheel/concord_sc-0.9.3.dist-info/WHEEL 2025-03-17T06:19:27,892 creating '/tmp/pip-wheel-u2je3kud/concord_sc-0.9.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-03-17T06:19:27,894 adding 'concord/__init__.py' 2025-03-17T06:19:27,899 adding 'concord/concord.py' 2025-03-17T06:19:27,900 adding 'concord/ml.py' 2025-03-17T06:19:27,901 adding 'concord/pl.py' 2025-03-17T06:19:27,902 adding 'concord/ul.py' 2025-03-17T06:19:27,904 adding 'concord/model/__init__.py' 2025-03-17T06:19:27,906 adding 'concord/model/anndataset.py' 2025-03-17T06:19:27,907 adding 'concord/model/build_layer.py' 2025-03-17T06:19:27,909 adding 'concord/model/chunkloader.py' 2025-03-17T06:19:27,912 adding 'concord/model/dataloader.py' 2025-03-17T06:19:27,914 adding 'concord/model/knn.py' 2025-03-17T06:19:27,915 adding 'concord/model/loss.py' 2025-03-17T06:19:27,917 adding 'concord/model/model.py' 2025-03-17T06:19:27,919 adding 'concord/model/sampler.py' 2025-03-17T06:19:27,921 adding 'concord/model/trainer.py' 2025-03-17T06:19:27,923 adding 'concord/plotting/__init__.py' 2025-03-17T06:19:27,925 adding 'concord/plotting/palettes.py' 2025-03-17T06:19:27,926 adding 'concord/plotting/pl_batch.py' 2025-03-17T06:19:27,928 adding 'concord/plotting/pl_benchmark.py' 2025-03-17T06:19:27,929 adding 'concord/plotting/pl_datacoverage.py' 2025-03-17T06:19:27,935 adding 'concord/plotting/pl_embedding.py' 2025-03-17T06:19:27,937 adding 'concord/plotting/pl_enrichment.py' 2025-03-17T06:19:27,938 adding 'concord/plotting/pl_general.py' 2025-03-17T06:19:27,940 adding 'concord/plotting/pl_geometry.py' 2025-03-17T06:19:27,942 adding 'concord/plotting/pl_graph.py' 2025-03-17T06:19:27,945 adding 'concord/plotting/pl_heatmap.py' 2025-03-17T06:19:27,947 adding 'concord/plotting/pl_model.py' 2025-03-17T06:19:27,948 adding 'concord/plotting/pl_path.py' 2025-03-17T06:19:27,950 adding 'concord/plotting/pl_tda.py' 2025-03-17T06:19:27,953 adding 'concord/utils/Hs_Mm_conversion.py' 2025-03-17T06:19:27,954 adding 'concord/utils/__init__.py' 2025-03-17T06:19:27,956 adding 'concord/utils/anndata_utils.py' 2025-03-17T06:19:27,957 adding 'concord/utils/batch_analysis.py' 2025-03-17T06:19:27,960 adding 'concord/utils/benchmark.py' 2025-03-17T06:19:27,962 adding 'concord/utils/cell_cycle.py' 2025-03-17T06:19:27,963 adding 'concord/utils/cellxgene.py' 2025-03-17T06:19:27,964 adding 'concord/utils/coverage_estimator.py' 2025-03-17T06:19:27,966 adding 'concord/utils/doublet_utils.py' 2025-03-17T06:19:27,967 adding 'concord/utils/enrichment_analysis.py' 2025-03-17T06:19:27,968 adding 'concord/utils/estimate_aug_mask_prob.py' 2025-03-17T06:19:27,969 adding 'concord/utils/evaluator.py' 2025-03-17T06:19:27,971 adding 'concord/utils/feature_selector.py' 2025-03-17T06:19:27,973 adding 'concord/utils/geometry.py' 2025-03-17T06:19:27,975 adding 'concord/utils/importance_analysis.py' 2025-03-17T06:19:27,976 adding 'concord/utils/io.py' 2025-03-17T06:19:27,977 adding 'concord/utils/other_util.py' 2025-03-17T06:19:27,979 adding 'concord/utils/path_analysis.py' 2025-03-17T06:19:27,980 adding 'concord/utils/preprocessor.py' 2025-03-17T06:19:27,982 adding 'concord/utils/run_dim_reduction.py' 2025-03-17T06:19:27,983 adding 'concord/utils/run_integration_methods.py' 2025-03-17T06:19:27,989 adding 'concord/utils/simulation.py' 2025-03-17T06:19:27,991 adding 'concord/utils/sparsity.py' 2025-03-17T06:19:27,993 adding 'concord/utils/tda.py' 2025-03-17T06:19:27,994 adding 'concord/utils/timer.py' 2025-03-17T06:19:27,995 adding 'concord/utils/value_check.py' 2025-03-17T06:19:27,997 adding 'concord/utils/visCello.py' 2025-03-17T06:19:27,999 adding 'concord_sc-0.9.3.dist-info/LICENSE.md' 2025-03-17T06:19:28,000 adding 'concord_sc-0.9.3.dist-info/METADATA' 2025-03-17T06:19:28,001 adding 'concord_sc-0.9.3.dist-info/WHEEL' 2025-03-17T06:19:28,002 adding 'concord_sc-0.9.3.dist-info/top_level.txt' 2025-03-17T06:19:28,004 adding 'concord_sc-0.9.3.dist-info/RECORD' 2025-03-17T06:19:28,007 removing build/bdist.linux-armv7l/wheel 2025-03-17T06:19:28,158 Building wheel for concord-sc (setup.py): finished with status 'done' 2025-03-17T06:19:28,163 Created wheel for concord-sc: filename=concord_sc-0.9.3-py3-none-any.whl size=139922 sha256=be9cb0040eec5c281a717a4281bd3770b4a7c8213a85987a756d851eebf9cc9e 2025-03-17T06:19:28,164 Stored in directory: /tmp/pip-ephem-wheel-cache-wckau13i/wheels/ff/b9/a8/c4d75b9489663d79367d41256a12e1a1b81bbb92f376e74d6f 2025-03-17T06:19:28,178 Successfully built concord-sc 2025-03-17T06:19:28,186 Removed build tracker: '/tmp/pip-build-tracker-ycf6an83'