2025-03-28T01:55:08,444 Created temporary directory: /tmp/pip-build-tracker-yjky019w 2025-03-28T01:55:08,445 Initialized build tracking at /tmp/pip-build-tracker-yjky019w 2025-03-28T01:55:08,445 Created build tracker: /tmp/pip-build-tracker-yjky019w 2025-03-28T01:55:08,446 Entered build tracker: /tmp/pip-build-tracker-yjky019w 2025-03-28T01:55:08,447 Created temporary directory: /tmp/pip-wheel-sxq02ptf 2025-03-28T01:55:08,451 Created temporary directory: /tmp/pip-ephem-wheel-cache-jwcqbqzi 2025-03-28T01:55:08,498 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-03-28T01:55:08,501 2 location(s) to search for versions of ligandmpnn: 2025-03-28T01:55:08,501 * https://pypi.org/simple/ligandmpnn/ 2025-03-28T01:55:08,501 * https://www.piwheels.org/simple/ligandmpnn/ 2025-03-28T01:55:08,501 Fetching project page and analyzing links: https://pypi.org/simple/ligandmpnn/ 2025-03-28T01:55:08,502 Getting page https://pypi.org/simple/ligandmpnn/ 2025-03-28T01:55:08,504 Found index url https://pypi.org/simple/ 2025-03-28T01:55:08,780 Fetched page https://pypi.org/simple/ligandmpnn/ as application/vnd.pypi.simple.v1+json 2025-03-28T01:55:08,782 Skipping link: No binaries permitted for ligandmpnn: https://files.pythonhosted.org/packages/f5/e9/0c808f143b977b5c3cb500671f1ce2eef54325ce9855f60836dbbae5fbdc/ligandmpnn-0.1.dev1-py3-none-any.whl (from https://pypi.org/simple/ligandmpnn/) (requires-python:<3.12,>=3.11) 2025-03-28T01:55:08,783 Found link https://files.pythonhosted.org/packages/00/04/6e7ad37ea81219ece46d0195da6d990c2597ba21e3ab65c5a0768735ccd6/ligandmpnn-0.1.dev1.tar.gz (from https://pypi.org/simple/ligandmpnn/) (requires-python:<3.12,>=3.11), version: 0.1.dev1 2025-03-28T01:55:08,784 Skipping link: No binaries permitted for ligandmpnn: https://files.pythonhosted.org/packages/e7/de/039be7f144e0f15edba88c3e98240f3e027d7c74a69fb6667f532885ef82/ligandmpnn-0.1.1-py3-none-any.whl (from https://pypi.org/simple/ligandmpnn/) (requires-python:<3.12,>=3.11) 2025-03-28T01:55:08,785 Found link https://files.pythonhosted.org/packages/c0/0d/aa1aedc1c544c4852a12c3b97b3650aca17fd3b973ee80d9707be0e41b9c/ligandmpnn-0.1.1.tar.gz (from https://pypi.org/simple/ligandmpnn/) (requires-python:<3.12,>=3.11), version: 0.1.1 2025-03-28T01:55:08,786 Skipping link: No binaries permitted for ligandmpnn: https://files.pythonhosted.org/packages/0a/ca/ac90f6c4218b9f384340f861bba47a50455ffc6c55af106410a81ca1d7eb/ligandmpnn-0.1.2-py3-none-any.whl (from https://pypi.org/simple/ligandmpnn/) (requires-python:<3.12,>=3.11) 2025-03-28T01:55:08,787 Found link https://files.pythonhosted.org/packages/19/b6/c717afb0bd0dfe5fe69133865bd7818271051ae5f2208e3edc57eb1518cd/ligandmpnn-0.1.2.tar.gz (from https://pypi.org/simple/ligandmpnn/) (requires-python:<3.12,>=3.11), version: 0.1.2 2025-03-28T01:55:08,787 Fetching project page and analyzing links: https://www.piwheels.org/simple/ligandmpnn/ 2025-03-28T01:55:08,788 Getting page https://www.piwheels.org/simple/ligandmpnn/ 2025-03-28T01:55:08,790 Found index url https://www.piwheels.org/simple/ 2025-03-28T01:55:08,945 Fetched page https://www.piwheels.org/simple/ligandmpnn/ as text/html 2025-03-28T01:55:08,947 Skipping link: not a file: https://www.piwheels.org/simple/ligandmpnn/ 2025-03-28T01:55:08,947 Skipping link: not a file: https://pypi.org/simple/ligandmpnn/ 2025-03-28T01:55:08,967 Given no hashes to check 1 links for project 'ligandmpnn': discarding no candidates 2025-03-28T01:55:08,969 Collecting ligandmpnn==0.1.dev1 2025-03-28T01:55:08,971 Created temporary directory: /tmp/pip-unpack-31pbepah 2025-03-28T01:55:09,188 Downloading ligandmpnn-0.1.dev1.tar.gz (140 kB) 2025-03-28T01:55:09,378 Added ligandmpnn==0.1.dev1 from https://files.pythonhosted.org/packages/00/04/6e7ad37ea81219ece46d0195da6d990c2597ba21e3ab65c5a0768735ccd6/ligandmpnn-0.1.dev1.tar.gz to build tracker '/tmp/pip-build-tracker-yjky019w' 2025-03-28T01:55:09,381 Running setup.py (path:/tmp/pip-wheel-sxq02ptf/ligandmpnn_6f080f3b56c142299c32f9bd412f0d21/setup.py) egg_info for package ligandmpnn 2025-03-28T01:55:09,382 Created temporary directory: /tmp/pip-pip-egg-info-sgnhhsnp 2025-03-28T01:55:09,382 Preparing metadata (setup.py): started 2025-03-28T01:55:09,384 Running command python setup.py egg_info 2025-03-28T01:55:10,477 running egg_info 2025-03-28T01:55:10,507 creating /tmp/pip-pip-egg-info-sgnhhsnp/ligandmpnn.egg-info 2025-03-28T01:55:10,508 writing /tmp/pip-pip-egg-info-sgnhhsnp/ligandmpnn.egg-info/PKG-INFO 2025-03-28T01:55:10,514 writing dependency_links to /tmp/pip-pip-egg-info-sgnhhsnp/ligandmpnn.egg-info/dependency_links.txt 2025-03-28T01:55:10,515 writing entry points to /tmp/pip-pip-egg-info-sgnhhsnp/ligandmpnn.egg-info/entry_points.txt 2025-03-28T01:55:10,518 writing requirements to /tmp/pip-pip-egg-info-sgnhhsnp/ligandmpnn.egg-info/requires.txt 2025-03-28T01:55:10,519 writing top-level names to /tmp/pip-pip-egg-info-sgnhhsnp/ligandmpnn.egg-info/top_level.txt 2025-03-28T01:55:10,520 writing manifest file '/tmp/pip-pip-egg-info-sgnhhsnp/ligandmpnn.egg-info/SOURCES.txt' 2025-03-28T01:55:10,617 reading manifest file '/tmp/pip-pip-egg-info-sgnhhsnp/ligandmpnn.egg-info/SOURCES.txt' 2025-03-28T01:55:10,618 adding license file 'LICENSE' 2025-03-28T01:55:10,622 writing manifest file '/tmp/pip-pip-egg-info-sgnhhsnp/ligandmpnn.egg-info/SOURCES.txt' 2025-03-28T01:55:10,732 Preparing metadata (setup.py): finished with status 'done' 2025-03-28T01:55:10,737 Source in /tmp/pip-wheel-sxq02ptf/ligandmpnn_6f080f3b56c142299c32f9bd412f0d21 has version 0.1.dev1, which satisfies requirement ligandmpnn==0.1.dev1 from https://files.pythonhosted.org/packages/00/04/6e7ad37ea81219ece46d0195da6d990c2597ba21e3ab65c5a0768735ccd6/ligandmpnn-0.1.dev1.tar.gz 2025-03-28T01:55:10,738 Removed ligandmpnn==0.1.dev1 from https://files.pythonhosted.org/packages/00/04/6e7ad37ea81219ece46d0195da6d990c2597ba21e3ab65c5a0768735ccd6/ligandmpnn-0.1.dev1.tar.gz from build tracker '/tmp/pip-build-tracker-yjky019w' 2025-03-28T01:55:10,751 Created temporary directory: /tmp/pip-unpack-x41tthui 2025-03-28T01:55:10,753 Created temporary directory: /tmp/pip-unpack-fe_dnd56 2025-03-28T01:55:10,753 Building wheels for collected packages: ligandmpnn 2025-03-28T01:55:10,757 Created temporary directory: /tmp/pip-wheel-hz1zbqi5 2025-03-28T01:55:10,758 Building wheel for ligandmpnn (setup.py): started 2025-03-28T01:55:10,759 Destination directory: /tmp/pip-wheel-hz1zbqi5 2025-03-28T01:55:10,760 Running command python setup.py bdist_wheel 2025-03-28T01:55:11,793 running bdist_wheel 2025-03-28T01:55:11,933 running build 2025-03-28T01:55:11,934 running build_py 2025-03-28T01:55:11,964 creating build/lib/ligandmpnn 2025-03-28T01:55:11,966 copying ligandmpnn/run.py -> build/lib/ligandmpnn 2025-03-28T01:55:11,969 copying ligandmpnn/__init__.py -> build/lib/ligandmpnn 2025-03-28T01:55:11,972 creating build/lib/scripts 2025-03-28T01:55:11,973 copying scripts/__init__.py -> build/lib/scripts 2025-03-28T01:55:11,975 creating build/lib/ligandmpnn/utils 2025-03-28T01:55:11,976 copying ligandmpnn/utils/data_utils.py -> build/lib/ligandmpnn/utils 2025-03-28T01:55:11,980 copying ligandmpnn/utils/__init__.py -> build/lib/ligandmpnn/utils 2025-03-28T01:55:11,981 copying ligandmpnn/utils/sc_utils.py -> build/lib/ligandmpnn/utils 2025-03-28T01:55:11,984 copying ligandmpnn/utils/score.py -> build/lib/ligandmpnn/utils 2025-03-28T01:55:11,987 copying ligandmpnn/utils/model_utils.py -> build/lib/ligandmpnn/utils 2025-03-28T01:55:11,991 creating build/lib/ligandmpnn/utils/openfold 2025-03-28T01:55:11,992 copying ligandmpnn/utils/openfold/config.py -> build/lib/ligandmpnn/utils/openfold 2025-03-28T01:55:11,996 copying ligandmpnn/utils/openfold/__init__.py -> build/lib/ligandmpnn/utils/openfold 2025-03-28T01:55:11,998 creating build/lib/ligandmpnn/utils/openfold/np 2025-03-28T01:55:11,999 copying ligandmpnn/utils/openfold/np/protein.py -> build/lib/ligandmpnn/utils/openfold/np 2025-03-28T01:55:12,002 copying ligandmpnn/utils/openfold/np/__init__.py -> build/lib/ligandmpnn/utils/openfold/np 2025-03-28T01:55:12,004 copying ligandmpnn/utils/openfold/np/residue_constants.py -> build/lib/ligandmpnn/utils/openfold/np 2025-03-28T01:55:12,008 creating build/lib/ligandmpnn/utils/openfold/resources 2025-03-28T01:55:12,009 copying ligandmpnn/utils/openfold/resources/__init__.py -> build/lib/ligandmpnn/utils/openfold/resources 2025-03-28T01:55:12,011 creating build/lib/ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,012 copying ligandmpnn/utils/openfold/utils/loss.py -> build/lib/ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,016 copying ligandmpnn/utils/openfold/utils/__init__.py -> build/lib/ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,017 copying ligandmpnn/utils/openfold/utils/feats.py -> build/lib/ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,019 copying ligandmpnn/utils/openfold/utils/rigid_utils.py -> build/lib/ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,022 copying ligandmpnn/utils/openfold/utils/tensor_utils.py -> build/lib/ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,025 creating build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,027 copying ligandmpnn/utils/openfold/data/mmcif_parsing.py -> build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,029 copying ligandmpnn/utils/openfold/data/errors.py -> build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,031 copying ligandmpnn/utils/openfold/data/data_transforms.py -> build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,034 copying ligandmpnn/utils/openfold/data/__init__.py -> build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,036 copying ligandmpnn/utils/openfold/data/templates.py -> build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,039 copying ligandmpnn/utils/openfold/data/data_pipeline.py -> build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,042 copying ligandmpnn/utils/openfold/data/parsers.py -> build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,045 copying ligandmpnn/utils/openfold/data/data_modules.py -> build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,048 copying ligandmpnn/utils/openfold/data/feature_pipeline.py -> build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,050 copying ligandmpnn/utils/openfold/data/input_pipeline.py -> build/lib/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,053 creating build/lib/ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,054 copying ligandmpnn/utils/openfold/np/relax/relax.py -> build/lib/ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,057 copying ligandmpnn/utils/openfold/np/relax/__init__.py -> build/lib/ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,059 copying ligandmpnn/utils/openfold/np/relax/cleanup.py -> build/lib/ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,062 copying ligandmpnn/utils/openfold/np/relax/amber_minimize.py -> build/lib/ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,066 copying ligandmpnn/utils/openfold/np/relax/utils.py -> build/lib/ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,069 creating build/lib/ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,071 copying ligandmpnn/utils/openfold/data/tools/kalign.py -> build/lib/ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,073 copying ligandmpnn/utils/openfold/data/tools/__init__.py -> build/lib/ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,075 copying ligandmpnn/utils/openfold/data/tools/jackhmmer.py -> build/lib/ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,078 copying ligandmpnn/utils/openfold/data/tools/hhsearch.py -> build/lib/ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,080 copying ligandmpnn/utils/openfold/data/tools/hhblits.py -> build/lib/ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,083 copying ligandmpnn/utils/openfold/data/tools/utils.py -> build/lib/ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,121 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-03-28T01:55:12,122 !! 2025-03-28T01:55:12,124 ******************************************************************************** 2025-03-28T01:55:12,124 Please avoid running ``setup.py`` directly. 2025-03-28T01:55:12,124 Instead, use pypa/build, pypa/installer or other 2025-03-28T01:55:12,125 standards-based tools. 2025-03-28T01:55:12,126 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-03-28T01:55:12,126 ******************************************************************************** 2025-03-28T01:55:12,127 !! 2025-03-28T01:55:12,127 self.initialize_options() 2025-03-28T01:55:12,152 installing to build/bdist.linux-armv7l/wheel 2025-03-28T01:55:12,153 running install 2025-03-28T01:55:12,177 running install_lib 2025-03-28T01:55:12,205 creating build/bdist.linux-armv7l/wheel 2025-03-28T01:55:12,207 creating build/bdist.linux-armv7l/wheel/ligandmpnn 2025-03-28T01:55:12,208 copying build/lib/ligandmpnn/run.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn 2025-03-28T01:55:12,212 copying build/lib/ligandmpnn/__init__.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn 2025-03-28T01:55:12,214 creating build/bdist.linux-armv7l/wheel/ligandmpnn/utils 2025-03-28T01:55:12,216 copying build/lib/ligandmpnn/utils/data_utils.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils 2025-03-28T01:55:12,219 copying build/lib/ligandmpnn/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils 2025-03-28T01:55:12,221 creating build/bdist.linux-armv7l/wheel/ligandmpnn/utils/openfold 2025-03-28T01:55:12,223 creating build/bdist.linux-armv7l/wheel/ligandmpnn/utils/openfold/np 2025-03-28T01:55:12,225 copying build/lib/ligandmpnn/utils/openfold/np/protein.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/np 2025-03-28T01:55:12,228 copying build/lib/ligandmpnn/utils/openfold/np/__init__.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/np 2025-03-28T01:55:12,230 copying build/lib/ligandmpnn/utils/openfold/np/residue_constants.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/np 2025-03-28T01:55:12,233 creating build/bdist.linux-armv7l/wheel/ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,235 copying build/lib/ligandmpnn/utils/openfold/np/relax/relax.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,237 copying build/lib/ligandmpnn/utils/openfold/np/relax/__init__.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,240 copying build/lib/ligandmpnn/utils/openfold/np/relax/cleanup.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,242 copying build/lib/ligandmpnn/utils/openfold/np/relax/amber_minimize.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,245 copying build/lib/ligandmpnn/utils/openfold/np/relax/utils.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/np/relax 2025-03-28T01:55:12,248 creating build/bdist.linux-armv7l/wheel/ligandmpnn/utils/openfold/resources 2025-03-28T01:55:12,250 copying build/lib/ligandmpnn/utils/openfold/resources/__init__.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/resources 2025-03-28T01:55:12,251 copying build/lib/ligandmpnn/utils/openfold/config.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold 2025-03-28T01:55:12,254 copying build/lib/ligandmpnn/utils/openfold/__init__.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold 2025-03-28T01:55:12,259 creating build/bdist.linux-armv7l/wheel/ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,260 copying build/lib/ligandmpnn/utils/openfold/utils/loss.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,264 copying build/lib/ligandmpnn/utils/openfold/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,266 copying build/lib/ligandmpnn/utils/openfold/utils/feats.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,268 copying build/lib/ligandmpnn/utils/openfold/utils/rigid_utils.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,272 copying build/lib/ligandmpnn/utils/openfold/utils/tensor_utils.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/utils 2025-03-28T01:55:12,275 creating build/bdist.linux-armv7l/wheel/ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,276 copying build/lib/ligandmpnn/utils/openfold/data/mmcif_parsing.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,279 copying build/lib/ligandmpnn/utils/openfold/data/errors.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,281 copying build/lib/ligandmpnn/utils/openfold/data/data_transforms.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,285 copying build/lib/ligandmpnn/utils/openfold/data/__init__.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,286 copying build/lib/ligandmpnn/utils/openfold/data/templates.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,289 copying build/lib/ligandmpnn/utils/openfold/data/data_pipeline.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,293 copying build/lib/ligandmpnn/utils/openfold/data/parsers.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,295 copying build/lib/ligandmpnn/utils/openfold/data/data_modules.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,299 creating build/bdist.linux-armv7l/wheel/ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,300 copying build/lib/ligandmpnn/utils/openfold/data/tools/kalign.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,302 copying build/lib/ligandmpnn/utils/openfold/data/tools/__init__.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,304 copying build/lib/ligandmpnn/utils/openfold/data/tools/jackhmmer.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,306 copying build/lib/ligandmpnn/utils/openfold/data/tools/hhsearch.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,309 copying build/lib/ligandmpnn/utils/openfold/data/tools/hhblits.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,311 copying build/lib/ligandmpnn/utils/openfold/data/tools/utils.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data/tools 2025-03-28T01:55:12,313 copying build/lib/ligandmpnn/utils/openfold/data/feature_pipeline.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,315 copying build/lib/ligandmpnn/utils/openfold/data/input_pipeline.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils/openfold/data 2025-03-28T01:55:12,318 copying build/lib/ligandmpnn/utils/sc_utils.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils 2025-03-28T01:55:12,322 copying build/lib/ligandmpnn/utils/score.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils 2025-03-28T01:55:12,325 copying build/lib/ligandmpnn/utils/model_utils.py -> build/bdist.linux-armv7l/wheel/./ligandmpnn/utils 2025-03-28T01:55:12,329 creating build/bdist.linux-armv7l/wheel/scripts 2025-03-28T01:55:12,330 copying build/lib/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/./scripts 2025-03-28T01:55:12,332 running install_egg_info 2025-03-28T01:55:12,365 running egg_info 2025-03-28T01:55:12,397 writing ligandmpnn.egg-info/PKG-INFO 2025-03-28T01:55:12,403 writing dependency_links to ligandmpnn.egg-info/dependency_links.txt 2025-03-28T01:55:12,405 writing entry points to ligandmpnn.egg-info/entry_points.txt 2025-03-28T01:55:12,407 writing requirements to ligandmpnn.egg-info/requires.txt 2025-03-28T01:55:12,409 writing top-level names to ligandmpnn.egg-info/top_level.txt 2025-03-28T01:55:12,445 reading manifest file 'ligandmpnn.egg-info/SOURCES.txt' 2025-03-28T01:55:12,449 adding license file 'LICENSE' 2025-03-28T01:55:12,454 writing manifest file 'ligandmpnn.egg-info/SOURCES.txt' 2025-03-28T01:55:12,455 Copying ligandmpnn.egg-info to build/bdist.linux-armv7l/wheel/./ligandmpnn-0.1.dev1-py3.11.egg-info 2025-03-28T01:55:12,467 running install_scripts 2025-03-28T01:55:12,490 creating build/bdist.linux-armv7l/wheel/ligandmpnn-0.1.dev1.dist-info/WHEEL 2025-03-28T01:55:12,493 creating '/tmp/pip-wheel-hz1zbqi5/ligandmpnn-0.1.dev1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-03-28T01:55:12,494 adding 'ligandmpnn/__init__.py' 2025-03-28T01:55:12,498 adding 'ligandmpnn/run.py' 2025-03-28T01:55:12,500 adding 'ligandmpnn/utils/__init__.py' 2025-03-28T01:55:12,503 adding 'ligandmpnn/utils/data_utils.py' 2025-03-28T01:55:12,508 adding 'ligandmpnn/utils/model_utils.py' 2025-03-28T01:55:12,513 adding 'ligandmpnn/utils/sc_utils.py' 2025-03-28T01:55:12,515 adding 'ligandmpnn/utils/score.py' 2025-03-28T01:55:12,517 adding 'ligandmpnn/utils/openfold/__init__.py' 2025-03-28T01:55:12,519 adding 'ligandmpnn/utils/openfold/config.py' 2025-03-28T01:55:12,521 adding 'ligandmpnn/utils/openfold/data/__init__.py' 2025-03-28T01:55:12,524 adding 'ligandmpnn/utils/openfold/data/data_modules.py' 2025-03-28T01:55:12,527 adding 'ligandmpnn/utils/openfold/data/data_pipeline.py' 2025-03-28T01:55:12,532 adding 'ligandmpnn/utils/openfold/data/data_transforms.py' 2025-03-28T01:55:12,534 adding 'ligandmpnn/utils/openfold/data/errors.py' 2025-03-28T01:55:12,535 adding 'ligandmpnn/utils/openfold/data/feature_pipeline.py' 2025-03-28T01:55:12,537 adding 'ligandmpnn/utils/openfold/data/input_pipeline.py' 2025-03-28T01:55:12,539 adding 'ligandmpnn/utils/openfold/data/mmcif_parsing.py' 2025-03-28T01:55:12,542 adding 'ligandmpnn/utils/openfold/data/parsers.py' 2025-03-28T01:55:12,547 adding 'ligandmpnn/utils/openfold/data/templates.py' 2025-03-28T01:55:12,549 adding 'ligandmpnn/utils/openfold/data/tools/__init__.py' 2025-03-28T01:55:12,551 adding 'ligandmpnn/utils/openfold/data/tools/hhblits.py' 2025-03-28T01:55:12,552 adding 'ligandmpnn/utils/openfold/data/tools/hhsearch.py' 2025-03-28T01:55:12,554 adding 'ligandmpnn/utils/openfold/data/tools/jackhmmer.py' 2025-03-28T01:55:12,555 adding 'ligandmpnn/utils/openfold/data/tools/kalign.py' 2025-03-28T01:55:12,557 adding 'ligandmpnn/utils/openfold/data/tools/utils.py' 2025-03-28T01:55:12,558 adding 'ligandmpnn/utils/openfold/np/__init__.py' 2025-03-28T01:55:12,561 adding 'ligandmpnn/utils/openfold/np/protein.py' 2025-03-28T01:55:12,565 adding 'ligandmpnn/utils/openfold/np/residue_constants.py' 2025-03-28T01:55:12,567 adding 'ligandmpnn/utils/openfold/np/relax/__init__.py' 2025-03-28T01:55:12,570 adding 'ligandmpnn/utils/openfold/np/relax/amber_minimize.py' 2025-03-28T01:55:12,572 adding 'ligandmpnn/utils/openfold/np/relax/cleanup.py' 2025-03-28T01:55:12,574 adding 'ligandmpnn/utils/openfold/np/relax/relax.py' 2025-03-28T01:55:12,575 adding 'ligandmpnn/utils/openfold/np/relax/utils.py' 2025-03-28T01:55:12,577 adding 'ligandmpnn/utils/openfold/resources/__init__.py' 2025-03-28T01:55:12,578 adding 'ligandmpnn/utils/openfold/utils/__init__.py' 2025-03-28T01:55:12,580 adding 'ligandmpnn/utils/openfold/utils/feats.py' 2025-03-28T01:55:12,586 adding 'ligandmpnn/utils/openfold/utils/loss.py' 2025-03-28T01:55:12,590 adding 'ligandmpnn/utils/openfold/utils/rigid_utils.py' 2025-03-28T01:55:12,592 adding 'ligandmpnn/utils/openfold/utils/tensor_utils.py' 2025-03-28T01:55:12,595 adding 'scripts/__init__.py' 2025-03-28T01:55:12,596 adding 'ligandmpnn-0.1.dev1.dist-info/LICENSE' 2025-03-28T01:55:12,598 adding 'ligandmpnn-0.1.dev1.dist-info/METADATA' 2025-03-28T01:55:12,599 adding 'ligandmpnn-0.1.dev1.dist-info/WHEEL' 2025-03-28T01:55:12,600 adding 'ligandmpnn-0.1.dev1.dist-info/entry_points.txt' 2025-03-28T01:55:12,601 adding 'ligandmpnn-0.1.dev1.dist-info/top_level.txt' 2025-03-28T01:55:12,603 adding 'ligandmpnn-0.1.dev1.dist-info/RECORD' 2025-03-28T01:55:12,606 removing build/bdist.linux-armv7l/wheel 2025-03-28T01:55:12,732 Building wheel for ligandmpnn (setup.py): finished with status 'done' 2025-03-28T01:55:12,736 Created wheel for ligandmpnn: filename=ligandmpnn-0.1.dev1-py3-none-any.whl size=155934 sha256=8c81c2b19ec65891aa9eb86b980b4646137e1d14babb069d62af572be20a1c52 2025-03-28T01:55:12,737 Stored in directory: /tmp/pip-ephem-wheel-cache-jwcqbqzi/wheels/be/03/bc/f1e2f161d29a1fa6d06ad47766e6d9dad8824b40dce1191deb 2025-03-28T01:55:12,753 Successfully built ligandmpnn 2025-03-28T01:55:12,760 Removed build tracker: '/tmp/pip-build-tracker-yjky019w'