2025-03-28T12:20:55,041 Created temporary directory: /tmp/pip-build-tracker-nzxk3g_q 2025-03-28T12:20:55,042 Initialized build tracking at /tmp/pip-build-tracker-nzxk3g_q 2025-03-28T12:20:55,043 Created build tracker: /tmp/pip-build-tracker-nzxk3g_q 2025-03-28T12:20:55,043 Entered build tracker: /tmp/pip-build-tracker-nzxk3g_q 2025-03-28T12:20:55,044 Created temporary directory: /tmp/pip-wheel-nagitbxa 2025-03-28T12:20:55,048 Created temporary directory: /tmp/pip-ephem-wheel-cache-811nxc70 2025-03-28T12:20:55,095 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-03-28T12:20:55,098 2 location(s) to search for versions of cell-annotation-schema: 2025-03-28T12:20:55,098 * https://pypi.org/simple/cell-annotation-schema/ 2025-03-28T12:20:55,098 * https://www.piwheels.org/simple/cell-annotation-schema/ 2025-03-28T12:20:55,099 Fetching project page and analyzing links: https://pypi.org/simple/cell-annotation-schema/ 2025-03-28T12:20:55,099 Getting page https://pypi.org/simple/cell-annotation-schema/ 2025-03-28T12:20:55,101 Found index url https://pypi.org/simple/ 2025-03-28T12:20:55,320 Fetched page https://pypi.org/simple/cell-annotation-schema/ as application/vnd.pypi.simple.v1+json 2025-03-28T12:20:55,322 Found link https://files.pythonhosted.org/packages/f2/d1/573f254aff73a74090a5c11e90ec8414809ace73ea51664e80db9c959ad1/cell-annotation-schema-0.2b0.tar.gz (from https://pypi.org/simple/cell-annotation-schema/), version: 0.2b0 2025-03-28T12:20:55,323 Skipping link: No binaries permitted for cell-annotation-schema: https://files.pythonhosted.org/packages/49/da/5a504453fe9847e6854bbe274b8a6413b05769f563d03ee8aa7fe66c26a0/cell_annotation_schema-0.2b0-py3-none-any.whl (from https://pypi.org/simple/cell-annotation-schema/) 2025-03-28T12:20:55,324 Found link https://files.pythonhosted.org/packages/fc/53/17ca5559182d70ee0132eb760a1ff1c0ac2c545fac417903e61fe121de16/cell-annotation-schema-0.3b0.tar.gz (from https://pypi.org/simple/cell-annotation-schema/), version: 0.3b0 2025-03-28T12:20:55,324 Skipping link: No binaries permitted for cell-annotation-schema: https://files.pythonhosted.org/packages/e8/03/55ee6578ca6cbca5ce8d886d680d9a56a2cb6eca53ea7beeee0139fc0718/cell_annotation_schema-0.3b0-py3-none-any.whl (from https://pypi.org/simple/cell-annotation-schema/) 2025-03-28T12:20:55,325 Found link https://files.pythonhosted.org/packages/56/e8/a3da2bdcea7f20feec73649fc011c52af2b436c2ac5084875cdb240d0cce/cell-annotation-schema-1.0.0.tar.gz (from https://pypi.org/simple/cell-annotation-schema/), version: 1.0.0 2025-03-28T12:20:55,325 Skipping link: No binaries permitted for cell-annotation-schema: https://files.pythonhosted.org/packages/14/a1/9d6c79df5477627451079828200c1467f340ead189be79ac44547fbe6aba/cell_annotation_schema-1.0.0-py3-none-any.whl (from https://pypi.org/simple/cell-annotation-schema/) 2025-03-28T12:20:55,326 Found link https://files.pythonhosted.org/packages/a6/f6/9452916c3d069e5a4e964c313f546813fbd1cbd411d80ed3e0691ab385c4/cell-annotation-schema-1.1.0.tar.gz (from https://pypi.org/simple/cell-annotation-schema/), version: 1.1.0 2025-03-28T12:20:55,327 Skipping link: No binaries permitted for cell-annotation-schema: https://files.pythonhosted.org/packages/fe/a4/f892a43d4ae55a3cf1e80112c7c7bcfecb0e8e2c04536f857ce02ccfe5af/cell_annotation_schema-1.1.0-py3-none-any.whl (from https://pypi.org/simple/cell-annotation-schema/) 2025-03-28T12:20:55,327 Fetching project page and analyzing links: https://www.piwheels.org/simple/cell-annotation-schema/ 2025-03-28T12:20:55,328 Getting page https://www.piwheels.org/simple/cell-annotation-schema/ 2025-03-28T12:20:55,329 Found index url https://www.piwheels.org/simple/ 2025-03-28T12:20:55,502 Fetched page https://www.piwheels.org/simple/cell-annotation-schema/ as text/html 2025-03-28T12:20:55,504 Skipping link: No binaries permitted for cell-annotation-schema: https://www.piwheels.org/simple/cell-annotation-schema/cell_annotation_schema-1.0.0-py3-none-any.whl#sha256=d3efc90234e466b6583d6ee959566acb111d5c79e7591781ce19e6514682078c (from https://www.piwheels.org/simple/cell-annotation-schema/) 2025-03-28T12:20:55,505 Skipping link: No binaries permitted for cell-annotation-schema: https://www.piwheels.org/simple/cell-annotation-schema/cell_annotation_schema-0.3b0-py3-none-any.whl#sha256=49e136cf5bad4b500f21587bde87cfc3c953368cd0574e7b66f978b7005bf476 (from https://www.piwheels.org/simple/cell-annotation-schema/) 2025-03-28T12:20:55,506 Skipping link: No binaries permitted for cell-annotation-schema: https://www.piwheels.org/simple/cell-annotation-schema/cell_annotation_schema-0.2b0-py3-none-any.whl#sha256=3df018df7a498795dd62f3b2f6fd4a61efae97d35bc946ba59c2650b57d83fe9 (from https://www.piwheels.org/simple/cell-annotation-schema/) 2025-03-28T12:20:55,506 Skipping link: not a file: https://www.piwheels.org/simple/cell-annotation-schema/ 2025-03-28T12:20:55,507 Skipping link: not a file: https://pypi.org/simple/cell-annotation-schema/ 2025-03-28T12:20:55,526 Given no hashes to check 1 links for project 'cell-annotation-schema': discarding no candidates 2025-03-28T12:20:55,528 Collecting cell-annotation-schema==1.1.0 2025-03-28T12:20:55,530 Created temporary directory: /tmp/pip-unpack-7z983lun 2025-03-28T12:20:55,743 Downloading cell-annotation-schema-1.1.0.tar.gz (20 kB) 2025-03-28T12:20:55,797 Added cell-annotation-schema==1.1.0 from https://files.pythonhosted.org/packages/a6/f6/9452916c3d069e5a4e964c313f546813fbd1cbd411d80ed3e0691ab385c4/cell-annotation-schema-1.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-nzxk3g_q' 2025-03-28T12:20:55,798 Running setup.py (path:/tmp/pip-wheel-nagitbxa/cell-annotation-schema_759ff3723acb4e3c80f62b8c0984f4d4/setup.py) egg_info for package cell-annotation-schema 2025-03-28T12:20:55,799 Created temporary directory: /tmp/pip-pip-egg-info-1_86qexm 2025-03-28T12:20:55,800 Preparing metadata (setup.py): started 2025-03-28T12:20:55,801 Running command python setup.py egg_info 2025-03-28T12:20:56,838 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:337: InformationOnly: Normalizing 'v1.1.0' to '1.1.0' 2025-03-28T12:20:56,838 self.metadata.version = self._normalize_version(self.metadata.version) 2025-03-28T12:20:56,873 running egg_info 2025-03-28T12:20:56,900 creating /tmp/pip-pip-egg-info-1_86qexm/cell_annotation_schema.egg-info 2025-03-28T12:20:56,902 writing /tmp/pip-pip-egg-info-1_86qexm/cell_annotation_schema.egg-info/PKG-INFO 2025-03-28T12:20:56,905 writing dependency_links to /tmp/pip-pip-egg-info-1_86qexm/cell_annotation_schema.egg-info/dependency_links.txt 2025-03-28T12:20:56,907 writing requirements to /tmp/pip-pip-egg-info-1_86qexm/cell_annotation_schema.egg-info/requires.txt 2025-03-28T12:20:56,908 writing top-level names to /tmp/pip-pip-egg-info-1_86qexm/cell_annotation_schema.egg-info/top_level.txt 2025-03-28T12:20:56,909 writing manifest file '/tmp/pip-pip-egg-info-1_86qexm/cell_annotation_schema.egg-info/SOURCES.txt' 2025-03-28T12:20:56,998 reading manifest file '/tmp/pip-pip-egg-info-1_86qexm/cell_annotation_schema.egg-info/SOURCES.txt' 2025-03-28T12:20:57,000 reading manifest template 'MANIFEST.in' 2025-03-28T12:20:57,005 writing manifest file '/tmp/pip-pip-egg-info-1_86qexm/cell_annotation_schema.egg-info/SOURCES.txt' 2025-03-28T12:20:57,115 Preparing metadata (setup.py): finished with status 'done' 2025-03-28T12:20:57,120 Source in /tmp/pip-wheel-nagitbxa/cell-annotation-schema_759ff3723acb4e3c80f62b8c0984f4d4 has version 1.1.0, which satisfies requirement cell-annotation-schema==1.1.0 from https://files.pythonhosted.org/packages/a6/f6/9452916c3d069e5a4e964c313f546813fbd1cbd411d80ed3e0691ab385c4/cell-annotation-schema-1.1.0.tar.gz 2025-03-28T12:20:57,121 Removed cell-annotation-schema==1.1.0 from https://files.pythonhosted.org/packages/a6/f6/9452916c3d069e5a4e964c313f546813fbd1cbd411d80ed3e0691ab385c4/cell-annotation-schema-1.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-nzxk3g_q' 2025-03-28T12:20:57,126 Created temporary directory: /tmp/pip-unpack-b2wqckbi 2025-03-28T12:20:57,127 Created temporary directory: /tmp/pip-unpack-_rgbd24o 2025-03-28T12:20:57,128 Building wheels for collected packages: cell-annotation-schema 2025-03-28T12:20:57,132 Created temporary directory: /tmp/pip-wheel-7tqrk2pb 2025-03-28T12:20:57,132 Building wheel for cell-annotation-schema (setup.py): started 2025-03-28T12:20:57,133 Destination directory: /tmp/pip-wheel-7tqrk2pb 2025-03-28T12:20:57,134 Running command python setup.py bdist_wheel 2025-03-28T12:20:58,142 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:337: InformationOnly: Normalizing 'v1.1.0' to '1.1.0' 2025-03-28T12:20:58,143 self.metadata.version = self._normalize_version(self.metadata.version) 2025-03-28T12:20:58,152 running bdist_wheel 2025-03-28T12:20:58,286 running build 2025-03-28T12:20:58,287 running build_py 2025-03-28T12:20:58,316 creating build/lib/cas_schema 2025-03-28T12:20:58,318 copying src/cas_schema/schema_manager.py -> build/lib/cas_schema 2025-03-28T12:20:58,320 copying src/cas_schema/json_utils.py -> build/lib/cas_schema 2025-03-28T12:20:58,322 copying src/cas_schema/__init__.py -> build/lib/cas_schema 2025-03-28T12:20:58,324 copying src/cas_schema/schema_docs.py -> build/lib/cas_schema 2025-03-28T12:20:58,326 copying src/cas_schema/schema_merger.py -> build/lib/cas_schema 2025-03-28T12:20:58,328 copying src/cas_schema/schema_validator.py -> build/lib/cas_schema 2025-03-28T12:20:58,331 creating build/lib/cas_schema/schemas 2025-03-28T12:20:58,332 copying src/cas_schema/schemas/__init__.py -> build/lib/cas_schema/schemas 2025-03-28T12:20:58,334 running egg_info 2025-03-28T12:20:58,361 writing src/cell_annotation_schema.egg-info/PKG-INFO 2025-03-28T12:20:58,364 writing dependency_links to src/cell_annotation_schema.egg-info/dependency_links.txt 2025-03-28T12:20:58,366 writing requirements to src/cell_annotation_schema.egg-info/requires.txt 2025-03-28T12:20:58,368 writing top-level names to src/cell_annotation_schema.egg-info/top_level.txt 2025-03-28T12:20:58,399 reading manifest file 'src/cell_annotation_schema.egg-info/SOURCES.txt' 2025-03-28T12:20:58,402 reading manifest template 'MANIFEST.in' 2025-03-28T12:20:58,407 writing manifest file 'src/cell_annotation_schema.egg-info/SOURCES.txt' 2025-03-28T12:20:58,410 copying src/cas_schema/catalog.yaml -> build/lib/cas_schema 2025-03-28T12:20:58,439 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-03-28T12:20:58,440 !! 2025-03-28T12:20:58,441 ******************************************************************************** 2025-03-28T12:20:58,441 Please avoid running ``setup.py`` directly. 2025-03-28T12:20:58,442 Instead, use pypa/build, pypa/installer or other 2025-03-28T12:20:58,442 standards-based tools. 2025-03-28T12:20:58,444 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-03-28T12:20:58,444 ******************************************************************************** 2025-03-28T12:20:58,445 !! 2025-03-28T12:20:58,446 self.initialize_options() 2025-03-28T12:20:58,469 installing to build/bdist.linux-armv7l/wheel 2025-03-28T12:20:58,469 running install 2025-03-28T12:20:58,493 running install_lib 2025-03-28T12:20:58,520 creating build/bdist.linux-armv7l/wheel 2025-03-28T12:20:58,523 creating build/bdist.linux-armv7l/wheel/cas_schema 2025-03-28T12:20:58,524 copying build/lib/cas_schema/schema_manager.py -> build/bdist.linux-armv7l/wheel/./cas_schema 2025-03-28T12:20:58,526 copying build/lib/cas_schema/json_utils.py -> build/bdist.linux-armv7l/wheel/./cas_schema 2025-03-28T12:20:58,529 copying build/lib/cas_schema/__init__.py -> build/bdist.linux-armv7l/wheel/./cas_schema 2025-03-28T12:20:58,531 copying build/lib/cas_schema/schema_docs.py -> build/bdist.linux-armv7l/wheel/./cas_schema 2025-03-28T12:20:58,534 copying build/lib/cas_schema/schema_merger.py -> build/bdist.linux-armv7l/wheel/./cas_schema 2025-03-28T12:20:58,536 copying build/lib/cas_schema/catalog.yaml -> build/bdist.linux-armv7l/wheel/./cas_schema 2025-03-28T12:20:58,538 creating build/bdist.linux-armv7l/wheel/cas_schema/schemas 2025-03-28T12:20:58,540 copying build/lib/cas_schema/schemas/__init__.py -> build/bdist.linux-armv7l/wheel/./cas_schema/schemas 2025-03-28T12:20:58,542 copying build/lib/cas_schema/schema_validator.py -> build/bdist.linux-armv7l/wheel/./cas_schema 2025-03-28T12:20:58,544 running install_egg_info 2025-03-28T12:20:58,578 Copying src/cell_annotation_schema.egg-info to build/bdist.linux-armv7l/wheel/./cell_annotation_schema-1.1.0-py3.11.egg-info 2025-03-28T12:20:58,589 running install_scripts 2025-03-28T12:20:58,602 creating build/bdist.linux-armv7l/wheel/cell_annotation_schema-1.1.0.dist-info/WHEEL 2025-03-28T12:20:58,605 creating '/tmp/pip-wheel-7tqrk2pb/cell_annotation_schema-1.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-03-28T12:20:58,607 adding 'cas_schema/__init__.py' 2025-03-28T12:20:58,609 adding 'cas_schema/catalog.yaml' 2025-03-28T12:20:58,611 adding 'cas_schema/json_utils.py' 2025-03-28T12:20:58,613 adding 'cas_schema/schema_docs.py' 2025-03-28T12:20:58,615 adding 'cas_schema/schema_manager.py' 2025-03-28T12:20:58,617 adding 'cas_schema/schema_merger.py' 2025-03-28T12:20:58,619 adding 'cas_schema/schema_validator.py' 2025-03-28T12:20:58,621 adding 'cas_schema/schemas/__init__.py' 2025-03-28T12:20:58,624 adding 'cell_annotation_schema-1.1.0.dist-info/METADATA' 2025-03-28T12:20:58,625 adding 'cell_annotation_schema-1.1.0.dist-info/WHEEL' 2025-03-28T12:20:58,626 adding 'cell_annotation_schema-1.1.0.dist-info/top_level.txt' 2025-03-28T12:20:58,628 adding 'cell_annotation_schema-1.1.0.dist-info/RECORD' 2025-03-28T12:20:58,629 removing build/bdist.linux-armv7l/wheel 2025-03-28T12:20:58,746 Building wheel for cell-annotation-schema (setup.py): finished with status 'done' 2025-03-28T12:20:58,755 Created wheel for cell-annotation-schema: filename=cell_annotation_schema-1.1.0-py3-none-any.whl size=12212 sha256=16e9b4477af8373354a707a8eab87158bae093759c373fa76f67c45475b8a733 2025-03-28T12:20:58,756 Stored in directory: /tmp/pip-ephem-wheel-cache-811nxc70/wheels/39/e0/6d/66358710bb9dc3dea5b4b696695f4a950f1e566566bf701bfd 2025-03-28T12:20:58,765 Successfully built cell-annotation-schema 2025-03-28T12:20:58,769 Removed build tracker: '/tmp/pip-build-tracker-nzxk3g_q'