2025-05-30T14:53:35,630 Created temporary directory: /tmp/pip-build-tracker-7t3337wx 2025-05-30T14:53:35,631 Initialized build tracking at /tmp/pip-build-tracker-7t3337wx 2025-05-30T14:53:35,631 Created build tracker: /tmp/pip-build-tracker-7t3337wx 2025-05-30T14:53:35,632 Entered build tracker: /tmp/pip-build-tracker-7t3337wx 2025-05-30T14:53:35,633 Created temporary directory: /tmp/pip-wheel-_baru8hn 2025-05-30T14:53:35,637 Created temporary directory: /tmp/pip-ephem-wheel-cache-a3h_ocy2 2025-05-30T14:53:35,691 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-05-30T14:53:35,694 2 location(s) to search for versions of hifisr: 2025-05-30T14:53:35,694 * https://pypi.org/simple/hifisr/ 2025-05-30T14:53:35,694 * https://www.piwheels.org/simple/hifisr/ 2025-05-30T14:53:35,695 Fetching project page and analyzing links: https://pypi.org/simple/hifisr/ 2025-05-30T14:53:35,695 Getting page https://pypi.org/simple/hifisr/ 2025-05-30T14:53:35,697 Found index url https://pypi.org/simple/ 2025-05-30T14:53:35,925 Fetched page https://pypi.org/simple/hifisr/ as application/vnd.pypi.simple.v1+json 2025-05-30T14:53:35,930 Skipping link: No binaries permitted for hifisr: https://files.pythonhosted.org/packages/0a/3a/b4ddf2a81278c6a0f24e33fbc1933a074795ed4cbb23e7714ada58c595f6/hifisr-0.3.0-py3-none-any.whl (from https://pypi.org/simple/hifisr/) 2025-05-30T14:53:35,931 Found link https://files.pythonhosted.org/packages/7f/b2/e000d9ed0e018b513777b11394a115cd5a38715bf1cff70a4804bd1150e0/hifisr-0.3.0.tar.gz (from https://pypi.org/simple/hifisr/), version: 0.3.0 2025-05-30T14:53:35,932 Skipping link: No binaries permitted for hifisr: https://files.pythonhosted.org/packages/98/d0/1cda34fb5c62b79b77b65b2916575229da494e8850654e194af58da5af04/hifisr-0.4.0-py3-none-any.whl (from https://pypi.org/simple/hifisr/) 2025-05-30T14:53:35,933 Found link https://files.pythonhosted.org/packages/a0/cd/a82a031e3c55a3c90446b782ed2687aec200c5c7ad81511d101c58698da9/hifisr-0.4.0.tar.gz (from https://pypi.org/simple/hifisr/), version: 0.4.0 2025-05-30T14:53:35,934 Skipping link: No binaries permitted for hifisr: https://files.pythonhosted.org/packages/44/21/19f52e364841476ca62f1c86d65053f47c270e192f98f4ff405506ce01a4/hifisr-0.4.1-py3-none-any.whl (from https://pypi.org/simple/hifisr/) 2025-05-30T14:53:35,935 Found link https://files.pythonhosted.org/packages/0d/d5/89b015f7776afc05de7a418e8e24c2b394c913be4fa43e0001476577e037/hifisr-0.4.1.tar.gz (from https://pypi.org/simple/hifisr/), version: 0.4.1 2025-05-30T14:53:35,936 Skipping link: No binaries permitted for hifisr: https://files.pythonhosted.org/packages/3b/43/f40d67e395854dfba7b7ea254739d3ae9fbe096b1a218b74afa0fa821182/hifisr-0.5.0-py3-none-any.whl (from https://pypi.org/simple/hifisr/) 2025-05-30T14:53:35,937 Found link https://files.pythonhosted.org/packages/99/f9/16106597916c404aebb58ac7cf0842ffd7a0b0a932bf70d1cf7a39cf0db8/hifisr-0.5.0.tar.gz (from https://pypi.org/simple/hifisr/), version: 0.5.0 2025-05-30T14:53:35,939 Fetching project page and analyzing links: https://www.piwheels.org/simple/hifisr/ 2025-05-30T14:53:35,940 Getting page https://www.piwheels.org/simple/hifisr/ 2025-05-30T14:53:35,941 Found index url https://www.piwheels.org/simple/ 2025-05-30T14:53:36,097 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/hifisr/ 2025-05-30T14:53:36,755 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/hifisr/ 2025-05-30T14:53:37,922 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/hifisr/ 2025-05-30T14:53:40,094 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/hifisr/ 2025-05-30T14:53:44,269 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/hifisr/ 2025-05-30T14:53:44,440 Could not fetch URL https://www.piwheels.org/simple/hifisr/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/hifisr/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-05-30T14:53:44,442 Skipping link: not a file: https://www.piwheels.org/simple/hifisr/ 2025-05-30T14:53:44,443 Skipping link: not a file: https://pypi.org/simple/hifisr/ 2025-05-30T14:53:44,464 Given no hashes to check 1 links for project 'hifisr': discarding no candidates 2025-05-30T14:53:44,465 Collecting hifisr==0.4.1 2025-05-30T14:53:44,468 Created temporary directory: /tmp/pip-unpack-1lpkf3x2 2025-05-30T14:53:44,695 Downloading hifisr-0.4.1.tar.gz (22 kB) 2025-05-30T14:53:45,031 Added hifisr==0.4.1 from https://files.pythonhosted.org/packages/0d/d5/89b015f7776afc05de7a418e8e24c2b394c913be4fa43e0001476577e037/hifisr-0.4.1.tar.gz to build tracker '/tmp/pip-build-tracker-7t3337wx' 2025-05-30T14:53:45,035 Running setup.py (path:/tmp/pip-wheel-_baru8hn/hifisr_a43bb793fb5e4c93a8caa0bfa21831d2/setup.py) egg_info for package hifisr 2025-05-30T14:53:45,036 Created temporary directory: /tmp/pip-pip-egg-info-2n41h6ws 2025-05-30T14:53:45,036 Preparing metadata (setup.py): started 2025-05-30T14:53:45,038 Running command python setup.py egg_info 2025-05-30T14:53:45,944 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-05-30T14:53:45,944 !! 2025-05-30T14:53:45,945 ******************************************************************************** 2025-05-30T14:53:45,946 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-05-30T14:53:45,947 License :: OSI Approved :: MIT License 2025-05-30T14:53:45,948 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-05-30T14:53:45,949 ******************************************************************************** 2025-05-30T14:53:45,950 !! 2025-05-30T14:53:45,950 self._finalize_license_expression() 2025-05-30T14:53:45,974 running egg_info 2025-05-30T14:53:46,001 creating /tmp/pip-pip-egg-info-2n41h6ws/hifisr.egg-info 2025-05-30T14:53:46,002 writing /tmp/pip-pip-egg-info-2n41h6ws/hifisr.egg-info/PKG-INFO 2025-05-30T14:53:46,006 writing dependency_links to /tmp/pip-pip-egg-info-2n41h6ws/hifisr.egg-info/dependency_links.txt 2025-05-30T14:53:46,008 writing requirements to /tmp/pip-pip-egg-info-2n41h6ws/hifisr.egg-info/requires.txt 2025-05-30T14:53:46,009 writing top-level names to /tmp/pip-pip-egg-info-2n41h6ws/hifisr.egg-info/top_level.txt 2025-05-30T14:53:46,010 writing manifest file '/tmp/pip-pip-egg-info-2n41h6ws/hifisr.egg-info/SOURCES.txt' 2025-05-30T14:53:46,073 file hifisr_functions.py (for module hifisr_functions) not found 2025-05-30T14:53:46,103 reading manifest file '/tmp/pip-pip-egg-info-2n41h6ws/hifisr.egg-info/SOURCES.txt' 2025-05-30T14:53:46,105 adding license file 'LICENSE' 2025-05-30T14:53:46,108 writing manifest file '/tmp/pip-pip-egg-info-2n41h6ws/hifisr.egg-info/SOURCES.txt' 2025-05-30T14:53:46,212 Preparing metadata (setup.py): finished with status 'done' 2025-05-30T14:53:46,216 Source in /tmp/pip-wheel-_baru8hn/hifisr_a43bb793fb5e4c93a8caa0bfa21831d2 has version 0.4.1, which satisfies requirement hifisr==0.4.1 from https://files.pythonhosted.org/packages/0d/d5/89b015f7776afc05de7a418e8e24c2b394c913be4fa43e0001476577e037/hifisr-0.4.1.tar.gz 2025-05-30T14:53:46,217 Removed hifisr==0.4.1 from https://files.pythonhosted.org/packages/0d/d5/89b015f7776afc05de7a418e8e24c2b394c913be4fa43e0001476577e037/hifisr-0.4.1.tar.gz from build tracker '/tmp/pip-build-tracker-7t3337wx' 2025-05-30T14:53:46,223 Created temporary directory: /tmp/pip-unpack-p1iqcijs 2025-05-30T14:53:46,224 Created temporary directory: /tmp/pip-unpack-5s1qglnl 2025-05-30T14:53:46,225 Building wheels for collected packages: hifisr 2025-05-30T14:53:46,229 Created temporary directory: /tmp/pip-wheel-b855vgoy 2025-05-30T14:53:46,230 DEPRECATION: Building 'hifisr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'hifisr'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-05-30T14:53:46,232 Building wheel for hifisr (setup.py): started 2025-05-30T14:53:46,233 Destination directory: /tmp/pip-wheel-b855vgoy 2025-05-30T14:53:46,233 Running command python setup.py bdist_wheel 2025-05-30T14:53:47,070 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-05-30T14:53:47,070 !! 2025-05-30T14:53:47,071 ******************************************************************************** 2025-05-30T14:53:47,072 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-05-30T14:53:47,073 License :: OSI Approved :: MIT License 2025-05-30T14:53:47,074 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-05-30T14:53:47,075 ******************************************************************************** 2025-05-30T14:53:47,076 !! 2025-05-30T14:53:47,077 self._finalize_license_expression() 2025-05-30T14:53:47,077 running bdist_wheel 2025-05-30T14:53:47,213 running build 2025-05-30T14:53:47,214 running build_py 2025-05-30T14:53:47,244 file hifisr_functions.py (for module hifisr_functions) not found 2025-05-30T14:53:47,246 creating build/lib/hifisr_functions 2025-05-30T14:53:47,248 copying hifisr_functions/base.py -> build/lib/hifisr_functions 2025-05-30T14:53:47,250 copying hifisr_functions/reads.py -> build/lib/hifisr_functions 2025-05-30T14:53:47,253 copying hifisr_functions/__init__.py -> build/lib/hifisr_functions 2025-05-30T14:53:47,254 copying hifisr_functions/references.py -> build/lib/hifisr_functions 2025-05-30T14:53:47,257 copying hifisr_functions/annotations.py -> build/lib/hifisr_functions 2025-05-30T14:53:47,260 copying hifisr_functions/variants.py -> build/lib/hifisr_functions 2025-05-30T14:53:47,264 copying hifisr_functions/reports.py -> build/lib/hifisr_functions 2025-05-30T14:53:47,268 file hifisr_functions.py (for module hifisr_functions) not found 2025-05-30T14:53:47,300 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-05-30T14:53:47,301 !! 2025-05-30T14:53:47,302 ******************************************************************************** 2025-05-30T14:53:47,303 Please avoid running ``setup.py`` directly. 2025-05-30T14:53:47,303 Instead, use pypa/build, pypa/installer or other 2025-05-30T14:53:47,304 standards-based tools. 2025-05-30T14:53:47,305 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-05-30T14:53:47,306 or your builds will no longer be supported. 2025-05-30T14:53:47,307 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-05-30T14:53:47,308 ******************************************************************************** 2025-05-30T14:53:47,309 !! 2025-05-30T14:53:47,309 self.initialize_options() 2025-05-30T14:53:47,330 installing to build/bdist.linux-armv7l/wheel 2025-05-30T14:53:47,331 running install 2025-05-30T14:53:47,356 running install_lib 2025-05-30T14:53:47,384 creating build/bdist.linux-armv7l/wheel 2025-05-30T14:53:47,386 creating build/bdist.linux-armv7l/wheel/hifisr_functions 2025-05-30T14:53:47,388 copying build/lib/hifisr_functions/base.py -> build/bdist.linux-armv7l/wheel/./hifisr_functions 2025-05-30T14:53:47,390 copying build/lib/hifisr_functions/reads.py -> build/bdist.linux-armv7l/wheel/./hifisr_functions 2025-05-30T14:53:47,392 copying build/lib/hifisr_functions/__init__.py -> build/bdist.linux-armv7l/wheel/./hifisr_functions 2025-05-30T14:53:47,394 copying build/lib/hifisr_functions/references.py -> build/bdist.linux-armv7l/wheel/./hifisr_functions 2025-05-30T14:53:47,397 copying build/lib/hifisr_functions/annotations.py -> build/bdist.linux-armv7l/wheel/./hifisr_functions 2025-05-30T14:53:47,400 copying build/lib/hifisr_functions/variants.py -> build/bdist.linux-armv7l/wheel/./hifisr_functions 2025-05-30T14:53:47,403 copying build/lib/hifisr_functions/reports.py -> build/bdist.linux-armv7l/wheel/./hifisr_functions 2025-05-30T14:53:47,405 running install_egg_info 2025-05-30T14:53:47,445 running egg_info 2025-05-30T14:53:47,474 writing hifisr.egg-info/PKG-INFO 2025-05-30T14:53:47,477 writing dependency_links to hifisr.egg-info/dependency_links.txt 2025-05-30T14:53:47,479 writing requirements to hifisr.egg-info/requires.txt 2025-05-30T14:53:47,480 writing top-level names to hifisr.egg-info/top_level.txt 2025-05-30T14:53:47,484 file hifisr_functions.py (for module hifisr_functions) not found 2025-05-30T14:53:47,513 reading manifest file 'hifisr.egg-info/SOURCES.txt' 2025-05-30T14:53:47,516 adding license file 'LICENSE' 2025-05-30T14:53:47,519 writing manifest file 'hifisr.egg-info/SOURCES.txt' 2025-05-30T14:53:47,520 Copying hifisr.egg-info to build/bdist.linux-armv7l/wheel/./hifisr-0.4.1-py3.11.egg-info 2025-05-30T14:53:47,532 running install_scripts 2025-05-30T14:53:47,545 creating build/bdist.linux-armv7l/wheel/hifisr-0.4.1.dist-info/WHEEL 2025-05-30T14:53:47,548 creating '/tmp/pip-wheel-b855vgoy/hifisr-0.4.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-05-30T14:53:47,551 adding 'hifisr-0.4.1.dist-info/licenses/LICENSE' 2025-05-30T14:53:47,554 adding 'hifisr_functions/__init__.py' 2025-05-30T14:53:47,557 adding 'hifisr_functions/annotations.py' 2025-05-30T14:53:47,559 adding 'hifisr_functions/base.py' 2025-05-30T14:53:47,561 adding 'hifisr_functions/reads.py' 2025-05-30T14:53:47,563 adding 'hifisr_functions/references.py' 2025-05-30T14:53:47,565 adding 'hifisr_functions/reports.py' 2025-05-30T14:53:47,571 adding 'hifisr_functions/variants.py' 2025-05-30T14:53:47,572 adding 'hifisr-0.4.1.dist-info/METADATA' 2025-05-30T14:53:47,574 adding 'hifisr-0.4.1.dist-info/WHEEL' 2025-05-30T14:53:47,575 adding 'hifisr-0.4.1.dist-info/top_level.txt' 2025-05-30T14:53:47,576 adding 'hifisr-0.4.1.dist-info/RECORD' 2025-05-30T14:53:47,577 removing build/bdist.linux-armv7l/wheel 2025-05-30T14:53:47,691 Building wheel for hifisr (setup.py): finished with status 'done' 2025-05-30T14:53:47,693 Created wheel for hifisr: filename=hifisr-0.4.1-py3-none-any.whl size=22188 sha256=610a4256fc51dea35b3888d24894bf42cc9afd2a40acc2014306a93c02eef2bd 2025-05-30T14:53:47,695 Stored in directory: /tmp/pip-ephem-wheel-cache-a3h_ocy2/wheels/13/3d/ee/09644c54cb9ca8fa76f0815562a480d52f39745922d53e597a 2025-05-30T14:53:47,707 Successfully built hifisr 2025-05-30T14:53:47,711 Removed build tracker: '/tmp/pip-build-tracker-7t3337wx'