2025-05-31T06:05:28,366 Created temporary directory: /tmp/pip-build-tracker-35smblsz 2025-05-31T06:05:28,367 Initialized build tracking at /tmp/pip-build-tracker-35smblsz 2025-05-31T06:05:28,368 Created build tracker: /tmp/pip-build-tracker-35smblsz 2025-05-31T06:05:28,368 Entered build tracker: /tmp/pip-build-tracker-35smblsz 2025-05-31T06:05:28,369 Created temporary directory: /tmp/pip-wheel-d15ktkrh 2025-05-31T06:05:28,373 Created temporary directory: /tmp/pip-ephem-wheel-cache-5gcer2ib 2025-05-31T06:05:28,419 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-05-31T06:05:28,421 2 location(s) to search for versions of spatialx-connector: 2025-05-31T06:05:28,421 * https://pypi.org/simple/spatialx-connector/ 2025-05-31T06:05:28,421 * https://www.piwheels.org/simple/spatialx-connector/ 2025-05-31T06:05:28,422 Fetching project page and analyzing links: https://pypi.org/simple/spatialx-connector/ 2025-05-31T06:05:28,423 Getting page https://pypi.org/simple/spatialx-connector/ 2025-05-31T06:05:28,425 Found index url https://pypi.org/simple/ 2025-05-31T06:05:28,645 Fetched page https://pypi.org/simple/spatialx-connector/ as application/vnd.pypi.simple.v1+json 2025-05-31T06:05:28,650 Skipping link: No binaries permitted for spatialx-connector: https://files.pythonhosted.org/packages/06/15/af184ac7071c5027e7cfb3cdf3167436ff849656baf95f2679eb6ddf29fa/spatialx_connector-0.1.0-py3-none-any.whl (from https://pypi.org/simple/spatialx-connector/) 2025-05-31T06:05:28,650 Found link https://files.pythonhosted.org/packages/e2/fe/4a9fa58e74db4495259dcced51f496cabe43ce87ef775f10f963f32784be/spatialx_connector-0.1.0.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.0 2025-05-31T06:05:28,651 Skipping link: No binaries permitted for spatialx-connector: https://files.pythonhosted.org/packages/e7/dd/a119a08643a90ccfd60e50533ed30204676f4c079642be08df5fc64db903/spatialx_connector-0.1.1-py3-none-any.whl (from https://pypi.org/simple/spatialx-connector/) 2025-05-31T06:05:28,652 Found link https://files.pythonhosted.org/packages/81/ee/bff414651152efac0cd6ba2b601f2210a783fd11066cb383b1452acc2d98/spatialx_connector-0.1.1.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.1 2025-05-31T06:05:28,652 Skipping link: No binaries permitted for spatialx-connector: https://files.pythonhosted.org/packages/17/aa/bd965da9a4a5d3609189033a513fb9969c43303795a2cc4aa855b2d0ca43/spatialx_connector-0.1.2-py3-none-any.whl (from https://pypi.org/simple/spatialx-connector/) 2025-05-31T06:05:28,653 Found link https://files.pythonhosted.org/packages/a5/74/5d2324ea0befeaecd088f97b6a648f8eeb2d55985281368c3a16bf95ca20/spatialx_connector-0.1.2.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.2 2025-05-31T06:05:28,654 Skipping link: No binaries permitted for spatialx-connector: https://files.pythonhosted.org/packages/b1/d0/7a6d494bb8a4d35118e490767435a535dfb7e52a001d1f56beb360201e7f/spatialx_connector-0.1.3-py3-none-any.whl (from https://pypi.org/simple/spatialx-connector/) 2025-05-31T06:05:28,655 Found link https://files.pythonhosted.org/packages/fc/e0/cbebbf60d5a6ce13ab0ec204f893435b9ec31c171f041ef44be665f7ccaf/spatialx_connector-0.1.3.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.3 2025-05-31T06:05:28,655 Skipping link: No binaries permitted for spatialx-connector: https://files.pythonhosted.org/packages/a8/4c/ed723e3c95d1b511247e64d4a97ec12c7c3afb4dff7b6dbdabde1de05186/spatialx_connector-0.1.4-py3-none-any.whl (from https://pypi.org/simple/spatialx-connector/) 2025-05-31T06:05:28,656 Found link https://files.pythonhosted.org/packages/a3/f4/a53d7aad749cf6df2f71099a849d028fd6c3e7b6b67618c044db12dea9f8/spatialx_connector-0.1.4.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.4 2025-05-31T06:05:28,656 Skipping link: No binaries permitted for spatialx-connector: https://files.pythonhosted.org/packages/d2/b4/3aad8d2f42ca0ba307b7407bec75b594eeed906d45bab779b4fed0875a8b/spatialx_connector-0.1.5-py3-none-any.whl (from https://pypi.org/simple/spatialx-connector/) 2025-05-31T06:05:28,657 Found link https://files.pythonhosted.org/packages/8e/a7/e4030f69f0b08df6e4579aae413709070fd2d2873b8eb045607d8680acb9/spatialx_connector-0.1.5.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.5 2025-05-31T06:05:28,658 Found link https://files.pythonhosted.org/packages/61/1f/ba2ddc3de71f9ad4c585a3ee96648826f3954525976862479776474507c9/spatialx_connector-0.1.6.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.6 2025-05-31T06:05:28,658 Found link https://files.pythonhosted.org/packages/c2/c2/e94150aaf9753547f51ce99f9811a15b3ea65aa424762f26c76aee36a541/spatialx_connector-0.1.7.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.7 2025-05-31T06:05:28,659 Found link https://files.pythonhosted.org/packages/3a/41/32171102e00ab881c8984108d6c6de634130e903125955b330057a2763b7/spatialx_connector-0.1.8.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.8 2025-05-31T06:05:28,659 Found link https://files.pythonhosted.org/packages/d5/21/665865944d5d1bb0f9bbcef3ef4e4b17ca35ed74b3c3da6eeb170618245b/spatialx_connector-0.1.9.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.9 2025-05-31T06:05:28,660 Found link https://files.pythonhosted.org/packages/cf/67/2a4ace8172a96a50816e286d1c25f61daad01651c8814015add384cb1159/spatialx_connector-0.1.10.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.10 2025-05-31T06:05:28,660 Found link https://files.pythonhosted.org/packages/8d/58/ea394f91e40e0041ab093e096fe565c0d71f3bbf787fd5cf9046812e2334/spatialx_connector-0.1.11.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.1.11 2025-05-31T06:05:28,661 Found link https://files.pythonhosted.org/packages/5c/77/456b8902cc8d605068d4395bad4f42b081151a5a7dac7459a8e80c68fe60/spatialx_connector-0.2.0.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.0 2025-05-31T06:05:28,662 Found link https://files.pythonhosted.org/packages/4e/7d/8cd6dc2ac555a6cef4ecacc2205ff09d44ff42d401d15bc3af355c5f2197/spatialx_connector-0.2.1.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.1 2025-05-31T06:05:28,662 Found link https://files.pythonhosted.org/packages/d7/56/d5dbd48c4970f283413e128d239f9db1ffdb08a7f6fa0aa6f9a65dd122ed/spatialx_connector-0.2.2.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.2 2025-05-31T06:05:28,663 Found link https://files.pythonhosted.org/packages/4c/39/c270afd6a8aa5cde726c6ade00ad17f189f47d9ab84c76fed0bc9ebfe83e/spatialx_connector-0.2.3.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.3 2025-05-31T06:05:28,664 Found link https://files.pythonhosted.org/packages/1d/77/65913c6ed4144c3cf9366265cb8aaab894988358c80ae3262789489bd4b5/spatialx_connector-0.2.4.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.4 2025-05-31T06:05:28,664 Found link https://files.pythonhosted.org/packages/48/96/c42f828ce4282aedbff97c2e45f0d24f17597efb4d4b406156930ca9189f/spatialx_connector-0.2.5.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.5 2025-05-31T06:05:28,665 Found link https://files.pythonhosted.org/packages/15/3f/2bc9cf6be5edb8d0dcbd922cc208d1179e9fe875acb6b5af05f4dfdfaf65/spatialx_connector-0.2.6.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.6 2025-05-31T06:05:28,666 Found link https://files.pythonhosted.org/packages/c0/c4/abb40aa28fcf738cd6901615b73fe201579f9be2751b53595d269f916dfa/spatialx_connector-0.2.7.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.7 2025-05-31T06:05:28,667 Found link https://files.pythonhosted.org/packages/5f/de/e054001c472bab55ae7d90b7654a6a0e607f84d1f2ebc9697d9ec42e2b58/spatialx_connector-0.2.8.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.8 2025-05-31T06:05:28,667 Found link https://files.pythonhosted.org/packages/e5/f2/961fb110b96590420413d5518641fbaebec42e22fa963d5fefbd761954f9/spatialx_connector-0.2.9.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.9 2025-05-31T06:05:28,668 Found link https://files.pythonhosted.org/packages/4e/92/e65c40f46c2191f3cdabfc4b428fd036c980876d1e67692acf76af6e256e/spatialx_connector-0.2.10.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.10 2025-05-31T06:05:28,669 Found link https://files.pythonhosted.org/packages/fb/3f/0d53e7ce59874207b0e6f8fde059de8dde0211cefc248a076bc17d77ebd5/spatialx_connector-0.2.11.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.11 2025-05-31T06:05:28,670 Found link https://files.pythonhosted.org/packages/02/c3/fd3e88eb8d43bcc1baa6c06c8d3a43f6ca4d1e01e0b6e948c3f8209d3121/spatialx_connector-0.2.12.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.12 2025-05-31T06:05:28,670 Found link https://files.pythonhosted.org/packages/ca/d0/8218f333e1255544025e16fa4bd3e464aa648faf6f9adbe4d1a7f78ca408/spatialx_connector-0.2.13.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.13 2025-05-31T06:05:28,671 Found link https://files.pythonhosted.org/packages/d5/c1/193a121757faf15b4e6fd445ec0487d4ba7f245db013353318f6d5bde20e/spatialx_connector-0.2.14.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.14 2025-05-31T06:05:28,671 Found link https://files.pythonhosted.org/packages/6e/29/4682fc2c3065ca9901f513663f2a9dfb24973a1ba6a149b205ac751bd1ef/spatialx_connector-0.2.15.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.15 2025-05-31T06:05:28,672 Found link https://files.pythonhosted.org/packages/91/61/f6c866af612fe94eac3c37de85881bad965425418eb5ce33b2568a33316c/spatialx_connector-0.2.16.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.16 2025-05-31T06:05:28,672 Found link https://files.pythonhosted.org/packages/11/18/89b2a06458dd071ca8179b54ab07b10478a7624e3081e3a05e63a1c90988/spatialx_connector-0.2.17.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.17 2025-05-31T06:05:28,673 Found link https://files.pythonhosted.org/packages/92/41/58ab13b13964bd90103e4c7d3d36114c13a39ae813873f25769844c1e0d9/spatialx_connector-0.2.18.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.18 2025-05-31T06:05:28,673 Found link https://files.pythonhosted.org/packages/04/04/33163e25ff5e8749c7e9b6e28c6c9458233550cf8ec9b862eb40ba9e1d81/spatialx_connector-0.2.19.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.19 2025-05-31T06:05:28,674 Found link https://files.pythonhosted.org/packages/4c/18/a931f1467326113f70a9785bdfb137b0e3f75a172cc8fcb528ea29963a59/spatialx_connector-0.2.20.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.20 2025-05-31T06:05:28,675 Found link https://files.pythonhosted.org/packages/f4/d8/d3fda7124cfefcd7549aa95348124bb897445eec469556d7415f2c2a38e8/spatialx_connector-0.2.21.tar.gz (from https://pypi.org/simple/spatialx-connector/), version: 0.2.21 2025-05-31T06:05:28,676 Fetching project page and analyzing links: https://www.piwheels.org/simple/spatialx-connector/ 2025-05-31T06:05:28,676 Getting page https://www.piwheels.org/simple/spatialx-connector/ 2025-05-31T06:05:28,678 Found index url https://www.piwheels.org/simple/ 2025-05-31T06:05:28,827 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/spatialx-connector/ 2025-05-31T06:05:29,482 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/spatialx-connector/ 2025-05-31T06:05:30,670 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/spatialx-connector/ 2025-05-31T06:05:32,885 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/spatialx-connector/ 2025-05-31T06:05:37,098 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/spatialx-connector/ 2025-05-31T06:05:37,311 Could not fetch URL https://www.piwheels.org/simple/spatialx-connector/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/spatialx-connector/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-05-31T06:05:37,312 Skipping link: not a file: https://www.piwheels.org/simple/spatialx-connector/ 2025-05-31T06:05:37,313 Skipping link: not a file: https://pypi.org/simple/spatialx-connector/ 2025-05-31T06:05:37,333 Given no hashes to check 1 links for project 'spatialx-connector': discarding no candidates 2025-05-31T06:05:37,335 Collecting spatialx-connector==0.1.11 2025-05-31T06:05:37,337 Created temporary directory: /tmp/pip-unpack-jqxa813p 2025-05-31T06:05:37,556 Downloading spatialx_connector-0.1.11.tar.gz (104 kB) 2025-05-31T06:05:37,708 Added spatialx-connector==0.1.11 from https://files.pythonhosted.org/packages/8d/58/ea394f91e40e0041ab093e096fe565c0d71f3bbf787fd5cf9046812e2334/spatialx_connector-0.1.11.tar.gz to build tracker '/tmp/pip-build-tracker-35smblsz' 2025-05-31T06:05:37,710 Running setup.py (path:/tmp/pip-wheel-d15ktkrh/spatialx-connector_1ec05316f32648f5a0de64bc467faf9b/setup.py) egg_info for package spatialx-connector 2025-05-31T06:05:37,711 Created temporary directory: /tmp/pip-pip-egg-info-0hjs4wts 2025-05-31T06:05:37,712 Preparing metadata (setup.py): started 2025-05-31T06:05:37,713 Running command python setup.py egg_info 2025-05-31T06:05:38,601 running egg_info 2025-05-31T06:05:38,627 creating /tmp/pip-pip-egg-info-0hjs4wts/spatialx_connector.egg-info 2025-05-31T06:05:38,628 writing /tmp/pip-pip-egg-info-0hjs4wts/spatialx_connector.egg-info/PKG-INFO 2025-05-31T06:05:38,633 writing dependency_links to /tmp/pip-pip-egg-info-0hjs4wts/spatialx_connector.egg-info/dependency_links.txt 2025-05-31T06:05:38,635 writing requirements to /tmp/pip-pip-egg-info-0hjs4wts/spatialx_connector.egg-info/requires.txt 2025-05-31T06:05:38,636 writing top-level names to /tmp/pip-pip-egg-info-0hjs4wts/spatialx_connector.egg-info/top_level.txt 2025-05-31T06:05:38,637 writing manifest file '/tmp/pip-pip-egg-info-0hjs4wts/spatialx_connector.egg-info/SOURCES.txt' 2025-05-31T06:05:38,725 reading manifest file '/tmp/pip-pip-egg-info-0hjs4wts/spatialx_connector.egg-info/SOURCES.txt' 2025-05-31T06:05:38,730 writing manifest file '/tmp/pip-pip-egg-info-0hjs4wts/spatialx_connector.egg-info/SOURCES.txt' 2025-05-31T06:05:38,833 Preparing metadata (setup.py): finished with status 'done' 2025-05-31T06:05:38,840 Source in /tmp/pip-wheel-d15ktkrh/spatialx-connector_1ec05316f32648f5a0de64bc467faf9b has version 0.1.11, which satisfies requirement spatialx-connector==0.1.11 from https://files.pythonhosted.org/packages/8d/58/ea394f91e40e0041ab093e096fe565c0d71f3bbf787fd5cf9046812e2334/spatialx_connector-0.1.11.tar.gz 2025-05-31T06:05:38,841 Removed spatialx-connector==0.1.11 from https://files.pythonhosted.org/packages/8d/58/ea394f91e40e0041ab093e096fe565c0d71f3bbf787fd5cf9046812e2334/spatialx_connector-0.1.11.tar.gz from build tracker '/tmp/pip-build-tracker-35smblsz' 2025-05-31T06:05:38,852 Created temporary directory: /tmp/pip-unpack-34dyzc4n 2025-05-31T06:05:38,853 Created temporary directory: /tmp/pip-unpack-ai430kyx 2025-05-31T06:05:38,854 Building wheels for collected packages: spatialx-connector 2025-05-31T06:05:38,857 Created temporary directory: /tmp/pip-wheel-yrjlecdt 2025-05-31T06:05:38,858 DEPRECATION: Building 'spatialx-connector' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'spatialx-connector'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-05-31T06:05:38,860 Building wheel for spatialx-connector (setup.py): started 2025-05-31T06:05:38,861 Destination directory: /tmp/pip-wheel-yrjlecdt 2025-05-31T06:05:38,861 Running command python setup.py bdist_wheel 2025-05-31T06:05:39,664 running bdist_wheel 2025-05-31T06:05:39,789 running build 2025-05-31T06:05:39,790 running build_py 2025-05-31T06:05:39,818 creating build/lib/spatialx_connector 2025-05-31T06:05:39,820 copying spatialx_connector/_connector.py -> build/lib/spatialx_connector 2025-05-31T06:05:39,823 copying spatialx_connector/_constants.py -> build/lib/spatialx_connector 2025-05-31T06:05:39,826 copying spatialx_connector/_spatialdata.py -> build/lib/spatialx_connector 2025-05-31T06:05:39,828 copying spatialx_connector/__init__.py -> build/lib/spatialx_connector 2025-05-31T06:05:39,830 copying spatialx_connector/_studies.py -> build/lib/spatialx_connector 2025-05-31T06:05:39,832 copying spatialx_connector/_api.py -> build/lib/spatialx_connector 2025-05-31T06:05:39,835 copying spatialx_connector/_utils.py -> build/lib/spatialx_connector 2025-05-31T06:05:39,837 copying spatialx_connector/_anndata.py -> build/lib/spatialx_connector 2025-05-31T06:05:39,840 copying spatialx_connector/_analysis.py -> build/lib/spatialx_connector 2025-05-31T06:05:39,845 creating build/lib/spatialx_connector/analysis 2025-05-31T06:05:39,846 copying spatialx_connector/analysis/__init__.py -> build/lib/spatialx_connector/analysis 2025-05-31T06:05:39,849 creating build/lib/spatialx_connector/analysis/tools 2025-05-31T06:05:39,850 copying spatialx_connector/analysis/tools/_spatial.py -> build/lib/spatialx_connector/analysis/tools 2025-05-31T06:05:39,852 copying spatialx_connector/analysis/tools/_clustering.py -> build/lib/spatialx_connector/analysis/tools 2025-05-31T06:05:39,854 copying spatialx_connector/analysis/tools/_de.py -> build/lib/spatialx_connector/analysis/tools 2025-05-31T06:05:39,855 copying spatialx_connector/analysis/tools/_embeddings.py -> build/lib/spatialx_connector/analysis/tools 2025-05-31T06:05:39,858 copying spatialx_connector/analysis/tools/__init__.py -> build/lib/spatialx_connector/analysis/tools 2025-05-31T06:05:39,859 copying spatialx_connector/analysis/tools/_annotations.py -> build/lib/spatialx_connector/analysis/tools 2025-05-31T06:05:39,862 creating build/lib/spatialx_connector/analysis/preprocessing 2025-05-31T06:05:39,863 copying spatialx_connector/analysis/preprocessing/_embeddings.py -> build/lib/spatialx_connector/analysis/preprocessing 2025-05-31T06:05:39,865 copying spatialx_connector/analysis/preprocessing/__init__.py -> build/lib/spatialx_connector/analysis/preprocessing 2025-05-31T06:05:39,898 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-05-31T06:05:39,898 !! 2025-05-31T06:05:39,900 ******************************************************************************** 2025-05-31T06:05:39,900 Please avoid running ``setup.py`` directly. 2025-05-31T06:05:39,901 Instead, use pypa/build, pypa/installer or other 2025-05-31T06:05:39,901 standards-based tools. 2025-05-31T06:05:39,902 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-05-31T06:05:39,903 or your builds will no longer be supported. 2025-05-31T06:05:39,904 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-05-31T06:05:39,905 ******************************************************************************** 2025-05-31T06:05:39,905 !! 2025-05-31T06:05:39,906 self.initialize_options() 2025-05-31T06:05:39,924 installing to build/bdist.linux-armv7l/wheel 2025-05-31T06:05:39,925 running install 2025-05-31T06:05:39,948 running install_lib 2025-05-31T06:05:39,973 creating build/bdist.linux-armv7l/wheel 2025-05-31T06:05:39,975 creating build/bdist.linux-armv7l/wheel/spatialx_connector 2025-05-31T06:05:39,976 copying build/lib/spatialx_connector/_connector.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector 2025-05-31T06:05:39,979 copying build/lib/spatialx_connector/_constants.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector 2025-05-31T06:05:39,983 creating build/bdist.linux-armv7l/wheel/spatialx_connector/analysis 2025-05-31T06:05:39,984 copying build/lib/spatialx_connector/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector/analysis 2025-05-31T06:05:39,987 creating build/bdist.linux-armv7l/wheel/spatialx_connector/analysis/tools 2025-05-31T06:05:39,988 copying build/lib/spatialx_connector/analysis/tools/_spatial.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector/analysis/tools 2025-05-31T06:05:39,990 copying build/lib/spatialx_connector/analysis/tools/_clustering.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector/analysis/tools 2025-05-31T06:05:39,991 copying build/lib/spatialx_connector/analysis/tools/_de.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector/analysis/tools 2025-05-31T06:05:39,993 copying build/lib/spatialx_connector/analysis/tools/_embeddings.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector/analysis/tools 2025-05-31T06:05:39,996 copying build/lib/spatialx_connector/analysis/tools/__init__.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector/analysis/tools 2025-05-31T06:05:39,997 copying build/lib/spatialx_connector/analysis/tools/_annotations.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector/analysis/tools 2025-05-31T06:05:40,000 creating build/bdist.linux-armv7l/wheel/spatialx_connector/analysis/preprocessing 2025-05-31T06:05:40,001 copying build/lib/spatialx_connector/analysis/preprocessing/_embeddings.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector/analysis/preprocessing 2025-05-31T06:05:40,002 copying build/lib/spatialx_connector/analysis/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector/analysis/preprocessing 2025-05-31T06:05:40,004 copying build/lib/spatialx_connector/_spatialdata.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector 2025-05-31T06:05:40,006 copying build/lib/spatialx_connector/__init__.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector 2025-05-31T06:05:40,008 copying build/lib/spatialx_connector/_studies.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector 2025-05-31T06:05:40,011 copying build/lib/spatialx_connector/_api.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector 2025-05-31T06:05:40,013 copying build/lib/spatialx_connector/_utils.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector 2025-05-31T06:05:40,015 copying build/lib/spatialx_connector/_anndata.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector 2025-05-31T06:05:40,018 copying build/lib/spatialx_connector/_analysis.py -> build/bdist.linux-armv7l/wheel/./spatialx_connector 2025-05-31T06:05:40,020 running install_egg_info 2025-05-31T06:05:40,053 running egg_info 2025-05-31T06:05:40,079 writing spatialx_connector.egg-info/PKG-INFO 2025-05-31T06:05:40,082 writing dependency_links to spatialx_connector.egg-info/dependency_links.txt 2025-05-31T06:05:40,084 writing requirements to spatialx_connector.egg-info/requires.txt 2025-05-31T06:05:40,086 writing top-level names to spatialx_connector.egg-info/top_level.txt 2025-05-31T06:05:40,118 reading manifest file 'spatialx_connector.egg-info/SOURCES.txt' 2025-05-31T06:05:40,125 writing manifest file 'spatialx_connector.egg-info/SOURCES.txt' 2025-05-31T06:05:40,126 Copying spatialx_connector.egg-info to build/bdist.linux-armv7l/wheel/./spatialx_connector-0.1.11-py3.11.egg-info 2025-05-31T06:05:40,138 running install_scripts 2025-05-31T06:05:40,147 creating build/bdist.linux-armv7l/wheel/spatialx_connector-0.1.11.dist-info/WHEEL 2025-05-31T06:05:40,149 creating '/tmp/pip-wheel-yrjlecdt/spatialx_connector-0.1.11-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-05-31T06:05:40,152 adding 'spatialx_connector/__init__.py' 2025-05-31T06:05:40,154 adding 'spatialx_connector/_analysis.py' 2025-05-31T06:05:40,156 adding 'spatialx_connector/_anndata.py' 2025-05-31T06:05:40,159 adding 'spatialx_connector/_api.py' 2025-05-31T06:05:40,163 adding 'spatialx_connector/_connector.py' 2025-05-31T06:05:40,165 adding 'spatialx_connector/_constants.py' 2025-05-31T06:05:40,167 adding 'spatialx_connector/_spatialdata.py' 2025-05-31T06:05:40,169 adding 'spatialx_connector/_studies.py' 2025-05-31T06:05:40,171 adding 'spatialx_connector/_utils.py' 2025-05-31T06:05:40,172 adding 'spatialx_connector/analysis/__init__.py' 2025-05-31T06:05:40,174 adding 'spatialx_connector/analysis/preprocessing/__init__.py' 2025-05-31T06:05:40,175 adding 'spatialx_connector/analysis/preprocessing/_embeddings.py' 2025-05-31T06:05:40,177 adding 'spatialx_connector/analysis/tools/__init__.py' 2025-05-31T06:05:40,178 adding 'spatialx_connector/analysis/tools/_annotations.py' 2025-05-31T06:05:40,179 adding 'spatialx_connector/analysis/tools/_clustering.py' 2025-05-31T06:05:40,181 adding 'spatialx_connector/analysis/tools/_de.py' 2025-05-31T06:05:40,182 adding 'spatialx_connector/analysis/tools/_embeddings.py' 2025-05-31T06:05:40,183 adding 'spatialx_connector/analysis/tools/_spatial.py' 2025-05-31T06:05:40,188 adding 'spatialx_connector-0.1.11.dist-info/METADATA' 2025-05-31T06:05:40,189 adding 'spatialx_connector-0.1.11.dist-info/WHEEL' 2025-05-31T06:05:40,190 adding 'spatialx_connector-0.1.11.dist-info/top_level.txt' 2025-05-31T06:05:40,191 adding 'spatialx_connector-0.1.11.dist-info/RECORD' 2025-05-31T06:05:40,193 removing build/bdist.linux-armv7l/wheel 2025-05-31T06:05:40,305 Building wheel for spatialx-connector (setup.py): finished with status 'done' 2025-05-31T06:05:40,307 Created wheel for spatialx-connector: filename=spatialx_connector-0.1.11-py3-none-any.whl size=46117 sha256=0ecc6ca3ca90173efdb93a22a431d850f2292b3bffca276e50576d1be3c1a3f6 2025-05-31T06:05:40,309 Stored in directory: /tmp/pip-ephem-wheel-cache-5gcer2ib/wheels/a8/ce/10/85750a97e5f00af422eda6703b33559fd817d33b0909edd0d1 2025-05-31T06:05:40,326 Successfully built spatialx-connector 2025-05-31T06:05:40,331 Removed build tracker: '/tmp/pip-build-tracker-35smblsz'