2025-05-31T09:16:52,132 Created temporary directory: /tmp/pip-build-tracker-qr5_37l6 2025-05-31T09:16:52,134 Initialized build tracking at /tmp/pip-build-tracker-qr5_37l6 2025-05-31T09:16:52,135 Created build tracker: /tmp/pip-build-tracker-qr5_37l6 2025-05-31T09:16:52,135 Entered build tracker: /tmp/pip-build-tracker-qr5_37l6 2025-05-31T09:16:52,136 Created temporary directory: /tmp/pip-wheel-hlrmwo2k 2025-05-31T09:16:52,140 Created temporary directory: /tmp/pip-ephem-wheel-cache-y6eoxvak 2025-05-31T09:16:52,193 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-05-31T09:16:52,195 2 location(s) to search for versions of capsul: 2025-05-31T09:16:52,195 * https://pypi.org/simple/capsul/ 2025-05-31T09:16:52,195 * https://www.piwheels.org/simple/capsul/ 2025-05-31T09:16:52,196 Fetching project page and analyzing links: https://pypi.org/simple/capsul/ 2025-05-31T09:16:52,197 Getting page https://pypi.org/simple/capsul/ 2025-05-31T09:16:52,199 Found index url https://pypi.org/simple/ 2025-05-31T09:16:52,483 Fetched page https://pypi.org/simple/capsul/ as application/vnd.pypi.simple.v1+json 2025-05-31T09:16:52,490 Found link https://files.pythonhosted.org/packages/ce/f8/c3be60358139f7b0c82c4a269fa1753abbd1efcea97010db64673f9734b8/capsul-0.0.1.dev.tar.gz (from https://pypi.org/simple/capsul/), version: 0.0.1.dev 2025-05-31T09:16:52,492 Found link https://files.pythonhosted.org/packages/49/1d/fa3724b3ca12a68c57f04a0b2b7fbbd68a1a3042ad742ee5d2ead632c30d/capsul-0.0.1.tar.gz (from https://pypi.org/simple/capsul/), version: 0.0.1 2025-05-31T09:16:52,493 Found link https://files.pythonhosted.org/packages/5c/d5/149146ce1dda5d805ee219ec81942e20117b36e90f169b630e87bdb6685f/capsul-1.0.0.tar.gz (from https://pypi.org/simple/capsul/), version: 1.0.0 2025-05-31T09:16:52,494 Found link https://files.pythonhosted.org/packages/fd/be/7f664b3748daa7ec134398eb2ef2b43b4d1249fdeb33e54f9620cfa66306/capsul-1.1.0.tar.gz (from https://pypi.org/simple/capsul/), version: 1.1.0 2025-05-31T09:16:52,496 Found link https://files.pythonhosted.org/packages/da/bf/88274cd90ceea521dca01d69f3626603616f86f7319e9511fd0b10a14fdd/capsul-2.1.0.tar.gz (from https://pypi.org/simple/capsul/), version: 2.1.0 2025-05-31T09:16:52,497 Found link https://files.pythonhosted.org/packages/56/8a/33e76bc0447da7d0dc367f8fd3e09fc58f0ca8e781e043424faacc2ac052/capsul-2.1.1.tar.gz (from https://pypi.org/simple/capsul/), version: 2.1.1 2025-05-31T09:16:52,498 Found link https://files.pythonhosted.org/packages/2c/ed/185861ca07deb28603ac6b031920e137d15c8e7d77ea40daf1d952a40560/capsul-2.1.2.tar.gz (from https://pypi.org/simple/capsul/), version: 2.1.2 2025-05-31T09:16:52,500 Skipping link: No binaries permitted for capsul: https://files.pythonhosted.org/packages/c6/12/a5aeab5532ca0d0ae1cef6357ab47b3effbac69f7776598cf9adcbae20db/capsul-2.2.0-py2-none-any.whl (from https://pypi.org/simple/capsul/) 2025-05-31T09:16:52,501 Found link https://files.pythonhosted.org/packages/31/ad/158201ad0b43a178676a6c1f8b32b08feb2b20f95383c4edb05dcc6db815/capsul-2.2.0.tar.gz (from https://pypi.org/simple/capsul/), version: 2.2.0 2025-05-31T09:16:52,502 Skipping link: No binaries permitted for capsul: https://files.pythonhosted.org/packages/1c/be/5903c5053abbfbf3253cc83f60add4392a5190092010d69be0c99c5953ff/capsul-2.2.1-py2-none-any.whl (from https://pypi.org/simple/capsul/) 2025-05-31T09:16:52,503 Found link https://files.pythonhosted.org/packages/83/55/364915ad1433db7b469c0686a9afe69daf5a640a65da391a2682f6887466/capsul-2.2.1.tar.gz (from https://pypi.org/simple/capsul/), version: 2.2.1 2025-05-31T09:16:52,503 Skipping link: No binaries permitted for capsul: https://files.pythonhosted.org/packages/4b/ff/ca86b1a94d540bcf1eedd4bc527b6aa41677b076f5fef8f8a751585059e2/capsul-2.3.0-py3-none-any.whl (from https://pypi.org/simple/capsul/) 2025-05-31T09:16:52,504 Found link https://files.pythonhosted.org/packages/58/0a/1748fc47647a64dadbe341e772b4782be6efa023eb2a3209335b33f93a86/capsul-2.3.0.tar.gz (from https://pypi.org/simple/capsul/), version: 2.3.0 2025-05-31T09:16:52,504 Skipping link: No binaries permitted for capsul: https://files.pythonhosted.org/packages/ef/c2/1bc24fc562f80f938be4aa5dd41787da93ec892e04372ef679e1c1f72569/capsul-2.3.1-py3-none-any.whl (from https://pypi.org/simple/capsul/) 2025-05-31T09:16:52,505 Found link https://files.pythonhosted.org/packages/4d/c0/2185c59630f1d453e82640d9a5957526c09106a5e76a45937957fd7db7e2/capsul-2.3.1.tar.gz (from https://pypi.org/simple/capsul/), version: 2.3.1 2025-05-31T09:16:52,506 Skipping link: No binaries permitted for capsul: https://files.pythonhosted.org/packages/3a/8f/9c576e2a0226476967397a5de60375c872a35fd25397ffee173df6558698/capsul-2.3.2-py3-none-any.whl (from https://pypi.org/simple/capsul/) 2025-05-31T09:16:52,507 Found link https://files.pythonhosted.org/packages/3f/5b/0da57779de25ef189535fbd3a1651f646d2a7d5327d192a097469fb2835d/capsul-2.3.2.tar.gz (from https://pypi.org/simple/capsul/), version: 2.3.2 2025-05-31T09:16:52,507 Skipping link: No binaries permitted for capsul: https://files.pythonhosted.org/packages/68/03/f4a0fcff8d63a7131a4e88327fca282fb7053722a2503719eb4c1132a484/capsul-2.5.0-py3-none-any.whl (from https://pypi.org/simple/capsul/) 2025-05-31T09:16:52,508 Found link https://files.pythonhosted.org/packages/88/7e/215d7260c81e6539f4bfa1edfb320b645aa2deeb2dba76c9e72081e1228e/capsul-2.5.0.tar.gz (from https://pypi.org/simple/capsul/), version: 2.5.0 2025-05-31T09:16:52,508 Skipping link: No binaries permitted for capsul: https://files.pythonhosted.org/packages/0e/fd/e773b01db9e0e9f6217b67d980ced0f4da5db1e24ff366a20a0fb8c3e6f3/capsul-2.6.0-py3-none-any.whl (from https://pypi.org/simple/capsul/) 2025-05-31T09:16:52,509 Found link https://files.pythonhosted.org/packages/b6/77/f1988f3fd6815b05534d7418acd0f5a2a521368c482a5d69d91d3c028b83/capsul-2.6.0.tar.gz (from https://pypi.org/simple/capsul/), version: 2.6.0 2025-05-31T09:16:52,510 Fetching project page and analyzing links: https://www.piwheels.org/simple/capsul/ 2025-05-31T09:16:52,510 Getting page https://www.piwheels.org/simple/capsul/ 2025-05-31T09:16:52,512 Found index url https://www.piwheels.org/simple/ 2025-05-31T09:16:52,669 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/capsul/ 2025-05-31T09:16:53,337 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/capsul/ 2025-05-31T09:16:54,508 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/capsul/ 2025-05-31T09:16:56,685 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/capsul/ 2025-05-31T09:17:00,860 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/capsul/ 2025-05-31T09:17:01,029 Could not fetch URL https://www.piwheels.org/simple/capsul/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/capsul/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-05-31T09:17:01,031 Skipping link: not a file: https://www.piwheels.org/simple/capsul/ 2025-05-31T09:17:01,032 Skipping link: not a file: https://pypi.org/simple/capsul/ 2025-05-31T09:17:01,055 Given no hashes to check 1 links for project 'capsul': discarding no candidates 2025-05-31T09:17:01,057 Collecting capsul==2.6.0 2025-05-31T09:17:01,059 Created temporary directory: /tmp/pip-unpack-j75m0p1m 2025-05-31T09:17:01,699 Downloading capsul-2.6.0.tar.gz (2.4 MB) 2025-05-31T09:17:02,922 Added capsul==2.6.0 from https://files.pythonhosted.org/packages/b6/77/f1988f3fd6815b05534d7418acd0f5a2a521368c482a5d69d91d3c028b83/capsul-2.6.0.tar.gz to build tracker '/tmp/pip-build-tracker-qr5_37l6' 2025-05-31T09:17:02,924 Running setup.py (path:/tmp/pip-wheel-hlrmwo2k/capsul_afff87f042254361b553c46abe0762cd/setup.py) egg_info for package capsul 2025-05-31T09:17:02,925 Created temporary directory: /tmp/pip-pip-egg-info-wj9gp8jd 2025-05-31T09:17:02,926 Preparing metadata (setup.py): started 2025-05-31T09:17:02,927 Running command python setup.py egg_info 2025-05-31T09:17:03,869 running egg_info 2025-05-31T09:17:03,897 creating /tmp/pip-pip-egg-info-wj9gp8jd/capsul.egg-info 2025-05-31T09:17:03,898 writing /tmp/pip-pip-egg-info-wj9gp8jd/capsul.egg-info/PKG-INFO 2025-05-31T09:17:03,905 writing dependency_links to /tmp/pip-pip-egg-info-wj9gp8jd/capsul.egg-info/dependency_links.txt 2025-05-31T09:17:03,910 writing requirements to /tmp/pip-pip-egg-info-wj9gp8jd/capsul.egg-info/requires.txt 2025-05-31T09:17:03,911 writing top-level names to /tmp/pip-pip-egg-info-wj9gp8jd/capsul.egg-info/top_level.txt 2025-05-31T09:17:03,913 writing manifest file '/tmp/pip-pip-egg-info-wj9gp8jd/capsul.egg-info/SOURCES.txt' 2025-05-31T09:17:04,084 reading manifest file '/tmp/pip-pip-egg-info-wj9gp8jd/capsul.egg-info/SOURCES.txt' 2025-05-31T09:17:04,086 reading manifest template 'MANIFEST.in' 2025-05-31T09:17:04,088 warning: no files found matching 'README.txt' 2025-05-31T09:17:04,089 warning: no files found matching 'ez_setup.py' 2025-05-31T09:17:04,123 warning: no previously-included files matching '*.*~' found under directory 'doc/source' 2025-05-31T09:17:04,124 no previously-included directories found matching 'doc/source/*/generated' 2025-05-31T09:17:04,125 adding license file 'LICENSE' 2025-05-31T09:17:04,139 writing manifest file '/tmp/pip-pip-egg-info-wj9gp8jd/capsul.egg-info/SOURCES.txt' 2025-05-31T09:17:04,245 Preparing metadata (setup.py): finished with status 'done' 2025-05-31T09:17:04,249 Source in /tmp/pip-wheel-hlrmwo2k/capsul_afff87f042254361b553c46abe0762cd has version 2.6.0, which satisfies requirement capsul==2.6.0 from https://files.pythonhosted.org/packages/b6/77/f1988f3fd6815b05534d7418acd0f5a2a521368c482a5d69d91d3c028b83/capsul-2.6.0.tar.gz 2025-05-31T09:17:04,250 Removed capsul==2.6.0 from https://files.pythonhosted.org/packages/b6/77/f1988f3fd6815b05534d7418acd0f5a2a521368c482a5d69d91d3c028b83/capsul-2.6.0.tar.gz from build tracker '/tmp/pip-build-tracker-qr5_37l6' 2025-05-31T09:17:04,261 Created temporary directory: /tmp/pip-unpack-1mpblh0v 2025-05-31T09:17:04,262 Created temporary directory: /tmp/pip-unpack-7zn3g8ed 2025-05-31T09:17:04,262 Building wheels for collected packages: capsul 2025-05-31T09:17:04,267 Created temporary directory: /tmp/pip-wheel-1iib073y 2025-05-31T09:17:04,268 DEPRECATION: Building 'capsul' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'capsul'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-05-31T09:17:04,269 Building wheel for capsul (setup.py): started 2025-05-31T09:17:04,270 Destination directory: /tmp/pip-wheel-1iib073y 2025-05-31T09:17:04,271 Running command python setup.py bdist_wheel 2025-05-31T09:17:05,131 running bdist_wheel 2025-05-31T09:17:06,224 running build 2025-05-31T09:17:06,226 running build_py 2025-05-31T09:17:06,491 creating build/lib/capsul 2025-05-31T09:17:06,494 copying capsul/__init__.py -> build/lib/capsul 2025-05-31T09:17:06,496 copying capsul/run.py -> build/lib/capsul 2025-05-31T09:17:06,499 copying capsul/info.py -> build/lib/capsul 2025-05-31T09:17:06,501 copying capsul/__main__.py -> build/lib/capsul 2025-05-31T09:17:06,504 copying capsul/api.py -> build/lib/capsul 2025-05-31T09:17:06,507 creating build/lib/capsul/test 2025-05-31T09:17:06,508 copying capsul/test/__init__.py -> build/lib/capsul/test 2025-05-31T09:17:06,510 copying capsul/test/test_capsul_modules_import.py -> build/lib/capsul/test 2025-05-31T09:17:06,513 copying capsul/test/coverage.py -> build/lib/capsul/test 2025-05-31T09:17:06,515 copying capsul/test/__main__.py -> build/lib/capsul/test 2025-05-31T09:17:06,517 copying capsul/test/test_capsul_notebooks.py -> build/lib/capsul/test 2025-05-31T09:17:06,520 creating build/lib/capsul/engine 2025-05-31T09:17:06,522 copying capsul/engine/database.py -> build/lib/capsul/engine 2025-05-31T09:17:06,525 copying capsul/engine/__init__.py -> build/lib/capsul/engine 2025-05-31T09:17:06,529 copying capsul/engine/write_engine_config.py -> build/lib/capsul/engine 2025-05-31T09:17:06,531 copying capsul/engine/database_json.py -> build/lib/capsul/engine 2025-05-31T09:17:06,534 copying capsul/engine/run.py -> build/lib/capsul/engine 2025-05-31T09:17:06,537 copying capsul/engine/settings.py -> build/lib/capsul/engine 2025-05-31T09:17:06,540 copying capsul/engine/database_populse.py -> build/lib/capsul/engine 2025-05-31T09:17:06,544 creating build/lib/capsul/utils 2025-05-31T09:17:06,545 copying capsul/utils/__init__.py -> build/lib/capsul/utils 2025-05-31T09:17:06,547 copying capsul/utils/finder.py -> build/lib/capsul/utils 2025-05-31T09:17:06,550 copying capsul/utils/version_utils.py -> build/lib/capsul/utils 2025-05-31T09:17:06,553 creating build/lib/capsul/in_context 2025-05-31T09:17:06,554 copying capsul/in_context/nipype.py -> build/lib/capsul/in_context 2025-05-31T09:17:06,557 copying capsul/in_context/__init__.py -> build/lib/capsul/in_context 2025-05-31T09:17:06,559 copying capsul/in_context/fsl.py -> build/lib/capsul/in_context 2025-05-31T09:17:06,562 copying capsul/in_context/ants.py -> build/lib/capsul/in_context 2025-05-31T09:17:06,564 copying capsul/in_context/afni.py -> build/lib/capsul/in_context 2025-05-31T09:17:06,566 copying capsul/in_context/mrtrix.py -> build/lib/capsul/in_context 2025-05-31T09:17:06,568 copying capsul/in_context/spm.py -> build/lib/capsul/in_context 2025-05-31T09:17:06,571 copying capsul/in_context/freesurfer.py -> build/lib/capsul/in_context 2025-05-31T09:17:06,574 creating build/lib/capsul/study_config 2025-05-31T09:17:06,575 copying capsul/study_config/memory.py -> build/lib/capsul/study_config 2025-05-31T09:17:06,578 copying capsul/study_config/__init__.py -> build/lib/capsul/study_config 2025-05-31T09:17:06,581 copying capsul/study_config/config_utils.py -> build/lib/capsul/study_config 2025-05-31T09:17:06,583 copying capsul/study_config/run.py -> build/lib/capsul/study_config 2025-05-31T09:17:06,586 copying capsul/study_config/process_instance.py -> build/lib/capsul/study_config 2025-05-31T09:17:06,589 copying capsul/study_config/study_config.py -> build/lib/capsul/study_config 2025-05-31T09:17:06,594 creating build/lib/capsul/subprocess 2025-05-31T09:17:06,595 copying capsul/subprocess/__init__.py -> build/lib/capsul/subprocess 2025-05-31T09:17:06,598 copying capsul/subprocess/fsl.py -> build/lib/capsul/subprocess 2025-05-31T09:17:06,601 copying capsul/subprocess/ants.py -> build/lib/capsul/subprocess 2025-05-31T09:17:06,604 copying capsul/subprocess/afni.py -> build/lib/capsul/subprocess 2025-05-31T09:17:06,606 copying capsul/subprocess/spm.py -> build/lib/capsul/subprocess 2025-05-31T09:17:06,610 creating build/lib/capsul/attributes 2025-05-31T09:17:06,611 copying capsul/attributes/__init__.py -> build/lib/capsul/attributes 2025-05-31T09:17:06,614 copying capsul/attributes/attributes_schema.py -> build/lib/capsul/attributes 2025-05-31T09:17:06,617 copying capsul/attributes/fom_completion_engine.py -> build/lib/capsul/attributes 2025-05-31T09:17:06,621 copying capsul/attributes/completion_engine_factory.py -> build/lib/capsul/attributes 2025-05-31T09:17:06,623 copying capsul/attributes/completion_engine_iteration.py -> build/lib/capsul/attributes 2025-05-31T09:17:06,627 copying capsul/attributes/completion_engine.py -> build/lib/capsul/attributes 2025-05-31T09:17:06,631 copying capsul/attributes/attributes_factory.py -> build/lib/capsul/attributes 2025-05-31T09:17:06,634 creating build/lib/capsul/pipeline 2025-05-31T09:17:06,635 copying capsul/pipeline/topological_sort.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,638 copying capsul/pipeline/pipeline_tools.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,642 copying capsul/pipeline/__init__.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,644 copying capsul/pipeline/process_iteration.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,647 copying capsul/pipeline/python_export.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,650 copying capsul/pipeline/pipeline_workflow.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,654 copying capsul/pipeline/xml.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,657 copying capsul/pipeline/pipeline.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,662 copying capsul/pipeline/json_io.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,665 copying capsul/pipeline/pipeline_nodes.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,668 copying capsul/pipeline/pipeline_construction.py -> build/lib/capsul/pipeline 2025-05-31T09:17:06,671 creating build/lib/capsul/qt_gui 2025-05-31T09:17:06,673 copying capsul/qt_gui/__init__.py -> build/lib/capsul/qt_gui 2025-05-31T09:17:06,675 copying capsul/qt_gui/board_widget.py -> build/lib/capsul/qt_gui 2025-05-31T09:17:06,678 creating build/lib/capsul/plugins 2025-05-31T09:17:06,679 copying capsul/plugins/__init__.py -> build/lib/capsul/plugins 2025-05-31T09:17:06,682 creating build/lib/capsul/process 2025-05-31T09:17:06,683 copying capsul/process/__init__.py -> build/lib/capsul/process 2025-05-31T09:17:06,686 copying capsul/process/process.py -> build/lib/capsul/process 2025-05-31T09:17:06,691 copying capsul/process/nipype_process.py -> build/lib/capsul/process 2025-05-31T09:17:06,694 copying capsul/process/xml.py -> build/lib/capsul/process 2025-05-31T09:17:06,697 copying capsul/process/runprocess.py -> build/lib/capsul/process 2025-05-31T09:17:06,700 creating build/lib/capsul/qt_apps 2025-05-31T09:17:06,701 copying capsul/qt_apps/__init__.py -> build/lib/capsul/qt_apps 2025-05-31T09:17:06,704 copying capsul/qt_apps/main_window.py -> build/lib/capsul/qt_apps 2025-05-31T09:17:06,707 copying capsul/qt_apps/pipeline_viewer_app.py -> build/lib/capsul/qt_apps 2025-05-31T09:17:06,710 creating build/lib/capsul/sphinxext 2025-05-31T09:17:06,711 copying capsul/sphinxext/capsul_sphinx_layout.py -> build/lib/capsul/sphinxext 2025-05-31T09:17:06,713 copying capsul/sphinxext/pipelinedocgen.py -> build/lib/capsul/sphinxext 2025-05-31T09:17:06,716 copying capsul/sphinxext/__init__.py -> build/lib/capsul/sphinxext 2025-05-31T09:17:06,718 copying capsul/sphinxext/capsul_usecases_rst.py -> build/lib/capsul/sphinxext 2025-05-31T09:17:06,721 copying capsul/sphinxext/capsul_pipeline_rst.py -> build/lib/capsul/sphinxext 2025-05-31T09:17:06,723 copying capsul/sphinxext/usecasesdocgen.py -> build/lib/capsul/sphinxext 2025-05-31T09:17:06,727 copying capsul/sphinxext/layoutdocgen.py -> build/lib/capsul/sphinxext 2025-05-31T09:17:06,730 copying capsul/sphinxext/load_pilots.py -> build/lib/capsul/sphinxext 2025-05-31T09:17:06,732 copying capsul/sphinxext/capsul_pipeline_view.py -> build/lib/capsul/sphinxext 2025-05-31T09:17:06,735 creating build/lib/capsul/engine/test 2025-05-31T09:17:06,736 copying capsul/engine/test/__init__.py -> build/lib/capsul/engine/test 2025-05-31T09:17:06,738 copying capsul/engine/test/test_capsul_engine.py -> build/lib/capsul/engine/test 2025-05-31T09:17:06,742 creating build/lib/capsul/engine/module 2025-05-31T09:17:06,743 copying capsul/engine/module/somaworkflow.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,746 copying capsul/engine/module/nipype.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,748 copying capsul/engine/module/__init__.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,750 copying capsul/engine/module/fsl.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,753 copying capsul/engine/module/ants.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,755 copying capsul/engine/module/fom.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,758 copying capsul/engine/module/axon.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,760 copying capsul/engine/module/afni.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,762 copying capsul/engine/module/python.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,765 copying capsul/engine/module/mrtrix.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,767 copying capsul/engine/module/spm.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,769 copying capsul/engine/module/matlab.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,772 copying capsul/engine/module/attributes.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,775 copying capsul/engine/module/freesurfer.py -> build/lib/capsul/engine/module 2025-05-31T09:17:06,778 creating build/lib/capsul/utils/test 2025-05-31T09:17:06,779 copying capsul/utils/test/__init__.py -> build/lib/capsul/utils/test 2025-05-31T09:17:06,782 copying capsul/utils/test/test_utils.py -> build/lib/capsul/utils/test 2025-05-31T09:17:06,785 creating build/lib/capsul/study_config/test 2025-05-31T09:17:06,786 copying capsul/study_config/test/test_memory.py -> build/lib/capsul/study_config/test 2025-05-31T09:17:06,788 copying capsul/study_config/test/test_study_config_configuration.py -> build/lib/capsul/study_config/test 2025-05-31T09:17:06,791 copying capsul/study_config/test/__init__.py -> build/lib/capsul/study_config/test 2025-05-31T09:17:06,793 copying capsul/study_config/test/test_soma_workflow_with_kw.py -> build/lib/capsul/study_config/test 2025-05-31T09:17:06,796 copying capsul/study_config/test/test_study_config_fom.py -> build/lib/capsul/study_config/test 2025-05-31T09:17:06,798 copying capsul/study_config/test/test_soma_workflow.py -> build/lib/capsul/study_config/test 2025-05-31T09:17:06,801 copying capsul/study_config/test/test_fsl_config.py -> build/lib/capsul/study_config/test 2025-05-31T09:17:06,803 copying capsul/study_config/test/test_run_in_study_config.py -> build/lib/capsul/study_config/test 2025-05-31T09:17:06,806 copying capsul/study_config/test/test_run_process.py -> build/lib/capsul/study_config/test 2025-05-31T09:17:06,809 creating build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,810 copying capsul/study_config/config_modules/smartcaching_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,813 copying capsul/study_config/config_modules/fsl_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,815 copying capsul/study_config/config_modules/__init__.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,817 copying capsul/study_config/config_modules/nipype_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,820 copying capsul/study_config/config_modules/afni_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,822 copying capsul/study_config/config_modules/mrtrix_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,825 copying capsul/study_config/config_modules/matlab_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,828 copying capsul/study_config/config_modules/spm_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,830 copying capsul/study_config/config_modules/freesurfer_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,833 copying capsul/study_config/config_modules/ants_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,836 copying capsul/study_config/config_modules/attributes_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,838 copying capsul/study_config/config_modules/brainvisa_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,841 copying capsul/study_config/config_modules/somaworkflow_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,843 copying capsul/study_config/config_modules/fom_config.py -> build/lib/capsul/study_config/config_modules 2025-05-31T09:17:06,847 creating build/lib/capsul/attributes/test 2025-05-31T09:17:06,848 copying capsul/attributes/test/__init__.py -> build/lib/capsul/attributes/test 2025-05-31T09:17:06,850 copying capsul/attributes/test/test_attributed_process.py -> build/lib/capsul/attributes/test 2025-05-31T09:17:06,853 copying capsul/attributes/test/test_fom_process.py -> build/lib/capsul/attributes/test 2025-05-31T09:17:06,856 creating build/lib/capsul/pipeline/test 2025-05-31T09:17:06,858 copying capsul/pipeline/test/test_complex_pipeline_activations.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,861 copying capsul/pipeline/test/__init__.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,863 copying capsul/pipeline/test/test_switch_pipeline.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,866 copying capsul/pipeline/test/test_switch_subpipeline.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,869 copying capsul/pipeline/test/test_qc_nodes.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,871 copying capsul/pipeline/test/test_pipeline_parameters.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,874 copying capsul/pipeline/test/test_custom_nodes.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,877 copying capsul/pipeline/test/test_temporary.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,880 copying capsul/pipeline/test/test_process_iteration.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,882 copying capsul/pipeline/test/test_proc_with_outputs.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,885 copying capsul/pipeline/test/test_iterative_process.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,889 copying capsul/pipeline/test/test_activation.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,891 copying capsul/pipeline/test/test_double_switch.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,894 copying capsul/pipeline/test/test_pipeline_workflow.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,897 copying capsul/pipeline/test/test_pipeline.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,900 copying capsul/pipeline/test/test_pipeline_with_temp.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,902 copying capsul/pipeline/test/test_switch_optional_output.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,904 copying capsul/pipeline/test/test_optional_output_switch.py -> build/lib/capsul/pipeline/test 2025-05-31T09:17:06,908 creating build/lib/capsul/pipeline/custom_nodes 2025-05-31T09:17:06,909 copying capsul/pipeline/custom_nodes/__init__.py -> build/lib/capsul/pipeline/custom_nodes 2025-05-31T09:17:06,911 copying capsul/pipeline/custom_nodes/strconv.py -> build/lib/capsul/pipeline/custom_nodes 2025-05-31T09:17:06,913 copying capsul/pipeline/custom_nodes/loo_node.py -> build/lib/capsul/pipeline/custom_nodes 2025-05-31T09:17:06,916 copying capsul/pipeline/custom_nodes/strcat_node.py -> build/lib/capsul/pipeline/custom_nodes 2025-05-31T09:17:06,919 copying capsul/pipeline/custom_nodes/cv_node.py -> build/lib/capsul/pipeline/custom_nodes 2025-05-31T09:17:06,921 copying capsul/pipeline/custom_nodes/reduce_node.py -> build/lib/capsul/pipeline/custom_nodes 2025-05-31T09:17:06,924 copying capsul/pipeline/custom_nodes/map_node.py -> build/lib/capsul/pipeline/custom_nodes 2025-05-31T09:17:06,928 creating build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,930 copying capsul/pipeline/test/fake_morphologist/normalization_t1_spm8_reinit.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,932 copying capsul/pipeline/test/fake_morphologist/t1biascorrection.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,935 copying capsul/pipeline/test/fake_morphologist/aimsconverter.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,937 copying capsul/pipeline/test/fake_morphologist/__init__.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,939 copying capsul/pipeline/test/fake_morphologist/fslnormalization.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,941 copying capsul/pipeline/test/fake_morphologist/importt1mri.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,943 copying capsul/pipeline/test/fake_morphologist/normalization_aimsmiregister.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,946 copying capsul/pipeline/test/fake_morphologist/spmnormalization.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,948 copying capsul/pipeline/test/fake_morphologist/talairachtransformation.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,951 copying capsul/pipeline/test/fake_morphologist/reorientanatomy.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,953 copying capsul/pipeline/test/fake_morphologist/sulcilabellingspamlocal.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,955 copying capsul/pipeline/test/fake_morphologist/greywhiteclassificationhemi.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,957 copying capsul/pipeline/test/fake_morphologist/greywhitetopology.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,960 copying capsul/pipeline/test/fake_morphologist/brainorientation.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,963 copying capsul/pipeline/test/fake_morphologist/sulcilabellingspam.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,965 copying capsul/pipeline/test/fake_morphologist/sulciskeleton.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,968 copying capsul/pipeline/test/fake_morphologist/sulcilabelling.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,971 copying capsul/pipeline/test/fake_morphologist/fslnormalizationtoaims.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,973 copying capsul/pipeline/test/fake_morphologist/normalization.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,976 copying capsul/pipeline/test/fake_morphologist/morphologist.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,980 copying capsul/pipeline/test/fake_morphologist/splitbrain.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,983 copying capsul/pipeline/test/fake_morphologist/greywhitemesh.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,985 copying capsul/pipeline/test/fake_morphologist/sulcideeplabeling.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,987 copying capsul/pipeline/test/fake_morphologist/normalization_t1_spm12_reinit.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,990 copying capsul/pipeline/test/fake_morphologist/spmsn3dtoaims.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,992 copying capsul/pipeline/test/fake_morphologist/sulcilabellingann.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,994 copying capsul/pipeline/test/fake_morphologist/scalpmesh.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,996 copying capsul/pipeline/test/fake_morphologist/baladinnormalizationpipeline.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:06,999 copying capsul/pipeline/test/fake_morphologist/baladinnormalizationtoaims.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,001 copying capsul/pipeline/test/fake_morphologist/sulcigraph.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,004 copying capsul/pipeline/test/fake_morphologist/acpcorientation.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,006 copying capsul/pipeline/test/fake_morphologist/histoanalysis.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,008 copying capsul/pipeline/test/fake_morphologist/normalizationskullstripped.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,011 copying capsul/pipeline/test/fake_morphologist/talairachtransformationfromnormalization.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,014 copying capsul/pipeline/test/fake_morphologist/normalization_baladin.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,016 copying capsul/pipeline/test/fake_morphologist/skullstripping.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,018 copying capsul/pipeline/test/fake_morphologist/brainsegmentation.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,020 copying capsul/pipeline/test/fake_morphologist/sulcilabellingspammarkov.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,022 copying capsul/pipeline/test/fake_morphologist/sulcilabellingspamglobal.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,025 copying capsul/pipeline/test/fake_morphologist/sulcigraphmorphometrybysubject.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,027 copying capsul/pipeline/test/fake_morphologist/pialmesh.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,029 copying capsul/pipeline/test/fake_morphologist/normalization_fsl_reinit.py -> build/lib/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,032 creating build/lib/capsul/qt_gui/test 2025-05-31T09:17:07,033 copying capsul/qt_gui/test/__init__.py -> build/lib/capsul/qt_gui/test 2025-05-31T09:17:07,035 copying capsul/qt_gui/test/test_board_widget.py -> build/lib/capsul/qt_gui/test 2025-05-31T09:17:07,038 creating build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,039 copying capsul/qt_gui/widgets/links_debugger.py -> build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,042 copying capsul/qt_gui/widgets/pipeline_file_warning_widget.py -> build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,045 copying capsul/qt_gui/widgets/__init__.py -> build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,047 copying capsul/qt_gui/widgets/pipeline_developer_view.py -> build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,053 copying capsul/qt_gui/widgets/attributed_process_widget.py -> build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,056 copying capsul/qt_gui/widgets/pipeline_user_view.py -> build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,058 copying capsul/qt_gui/widgets/viewer_widget.py -> build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,061 copying capsul/qt_gui/widgets/activation_inspector.py -> build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,063 copying capsul/qt_gui/widgets/pipeline_developper_view.py -> build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,066 copying capsul/qt_gui/widgets/settings_editor.py -> build/lib/capsul/qt_gui/widgets 2025-05-31T09:17:07,069 creating build/lib/capsul/process/test 2025-05-31T09:17:07,070 copying capsul/process/test/__init__.py -> build/lib/capsul/process/test 2025-05-31T09:17:07,072 copying capsul/process/test/test_runprocess.py -> build/lib/capsul/process/test 2025-05-31T09:17:07,074 copying capsul/process/test/test_traits.py -> build/lib/capsul/process/test 2025-05-31T09:17:07,077 copying capsul/process/test/test_nipype_wrap.py -> build/lib/capsul/process/test 2025-05-31T09:17:07,079 copying capsul/process/test/test_load_from_description.py -> build/lib/capsul/process/test 2025-05-31T09:17:07,083 creating build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,084 copying capsul/qt_apps/resources/__init__.py -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,086 copying capsul/qt_apps/resources/icones.py -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,134 creating build/lib/capsul/qt_apps/utils 2025-05-31T09:17:07,135 copying capsul/qt_apps/utils/fill_treectrl.py -> build/lib/capsul/qt_apps/utils 2025-05-31T09:17:07,137 copying capsul/qt_apps/utils/find_pipelines.py -> build/lib/capsul/qt_apps/utils 2025-05-31T09:17:07,140 copying capsul/qt_apps/utils/__init__.py -> build/lib/capsul/qt_apps/utils 2025-05-31T09:17:07,142 copying capsul/qt_apps/utils/application.py -> build/lib/capsul/qt_apps/utils 2025-05-31T09:17:07,144 copying capsul/qt_apps/utils/window.py -> build/lib/capsul/qt_apps/utils 2025-05-31T09:17:07,146 creating build/lib/capsul/sphinxext/test 2025-05-31T09:17:07,147 copying capsul/sphinxext/test/test_usercases_doc.py -> build/lib/capsul/sphinxext/test 2025-05-31T09:17:07,149 copying capsul/sphinxext/test/__init__.py -> build/lib/capsul/sphinxext/test 2025-05-31T09:17:07,151 copying capsul/sphinxext/test/test_process_pipeline_doc.py -> build/lib/capsul/sphinxext/test 2025-05-31T09:17:07,178 copying capsul/pipeline/test/test_switch_subpipeline_one.json -> build/lib/capsul/pipeline/test 2025-05-31T09:17:07,181 copying capsul/pipeline/test/test_switch_subpipeline_two.json -> build/lib/capsul/pipeline/test 2025-05-31T09:17:07,183 copying capsul/process/test/xml_pipeline.xml -> build/lib/capsul/process/test 2025-05-31T09:17:07,186 copying capsul/process/test/test_pipeline.xml -> build/lib/capsul/process/test 2025-05-31T09:17:07,188 copying capsul/qt_apps/resources/capsul.ui -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,191 copying capsul/qt_apps/resources/search.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,194 copying capsul/qt_apps/resources/change_view.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,200 copying capsul/qt_apps/resources/inspect.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,204 copying capsul/qt_apps/resources/controller.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,208 copying capsul/qt_apps/resources/view_result.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,211 copying capsul/qt_apps/resources/open.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,214 copying capsul/qt_apps/resources/exit.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,217 copying capsul/qt_apps/resources/play.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,220 copying capsul/qt_apps/resources/transfer.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,223 copying capsul/qt_apps/resources/logo.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,241 copying capsul/qt_apps/resources/config.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,244 copying capsul/qt_apps/resources/help.png -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,247 copying capsul/qt_apps/resources/logo.gif -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,259 copying capsul/qt_apps/resources/icones.qrc -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,261 copying capsul/qt_apps/resources/readme.txt -> build/lib/capsul/qt_apps/resources 2025-05-31T09:17:07,282 running build_scripts 2025-05-31T09:17:07,282 creating build/scripts-3.11 2025-05-31T09:17:07,284 copying and adjusting capsul/qt_apps/capsulview -> build/scripts-3.11 2025-05-31T09:17:07,285 changing mode of build/scripts-3.11/capsulview from 644 to 755 2025-05-31T09:17:07,316 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-05-31T09:17:07,317 !! 2025-05-31T09:17:07,318 ******************************************************************************** 2025-05-31T09:17:07,319 Please avoid running ``setup.py`` directly. 2025-05-31T09:17:07,319 Instead, use pypa/build, pypa/installer or other 2025-05-31T09:17:07,320 standards-based tools. 2025-05-31T09:17:07,321 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-05-31T09:17:07,321 or your builds will no longer be supported. 2025-05-31T09:17:07,322 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-05-31T09:17:07,322 ******************************************************************************** 2025-05-31T09:17:07,323 !! 2025-05-31T09:17:07,324 self.initialize_options() 2025-05-31T09:17:07,345 installing to build/bdist.linux-armv7l/wheel 2025-05-31T09:17:07,345 running install 2025-05-31T09:17:07,370 running install_lib 2025-05-31T09:17:07,397 creating build/bdist.linux-armv7l/wheel 2025-05-31T09:17:07,399 creating build/bdist.linux-armv7l/wheel/capsul 2025-05-31T09:17:07,401 creating build/bdist.linux-armv7l/wheel/capsul/test 2025-05-31T09:17:07,402 copying build/lib/capsul/test/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/test 2025-05-31T09:17:07,403 copying build/lib/capsul/test/test_capsul_modules_import.py -> build/bdist.linux-armv7l/wheel/./capsul/test 2025-05-31T09:17:07,405 copying build/lib/capsul/test/coverage.py -> build/bdist.linux-armv7l/wheel/./capsul/test 2025-05-31T09:17:07,407 copying build/lib/capsul/test/__main__.py -> build/bdist.linux-armv7l/wheel/./capsul/test 2025-05-31T09:17:07,409 copying build/lib/capsul/test/test_capsul_notebooks.py -> build/bdist.linux-armv7l/wheel/./capsul/test 2025-05-31T09:17:07,411 copying build/lib/capsul/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul 2025-05-31T09:17:07,413 creating build/bdist.linux-armv7l/wheel/capsul/engine 2025-05-31T09:17:07,414 copying build/lib/capsul/engine/database.py -> build/bdist.linux-armv7l/wheel/./capsul/engine 2025-05-31T09:17:07,417 creating build/bdist.linux-armv7l/wheel/capsul/engine/test 2025-05-31T09:17:07,418 copying build/lib/capsul/engine/test/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/test 2025-05-31T09:17:07,420 copying build/lib/capsul/engine/test/test_capsul_engine.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/test 2025-05-31T09:17:07,423 copying build/lib/capsul/engine/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/engine 2025-05-31T09:17:07,426 copying build/lib/capsul/engine/write_engine_config.py -> build/bdist.linux-armv7l/wheel/./capsul/engine 2025-05-31T09:17:07,428 copying build/lib/capsul/engine/database_json.py -> build/bdist.linux-armv7l/wheel/./capsul/engine 2025-05-31T09:17:07,430 copying build/lib/capsul/engine/run.py -> build/bdist.linux-armv7l/wheel/./capsul/engine 2025-05-31T09:17:07,433 copying build/lib/capsul/engine/settings.py -> build/bdist.linux-armv7l/wheel/./capsul/engine 2025-05-31T09:17:07,436 copying build/lib/capsul/engine/database_populse.py -> build/bdist.linux-armv7l/wheel/./capsul/engine 2025-05-31T09:17:07,440 creating build/bdist.linux-armv7l/wheel/capsul/engine/module 2025-05-31T09:17:07,441 copying build/lib/capsul/engine/module/somaworkflow.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,444 copying build/lib/capsul/engine/module/nipype.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,446 copying build/lib/capsul/engine/module/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,449 copying build/lib/capsul/engine/module/fsl.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,451 copying build/lib/capsul/engine/module/ants.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,454 copying build/lib/capsul/engine/module/fom.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,457 copying build/lib/capsul/engine/module/axon.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,460 copying build/lib/capsul/engine/module/afni.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,462 copying build/lib/capsul/engine/module/python.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,465 copying build/lib/capsul/engine/module/mrtrix.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,467 copying build/lib/capsul/engine/module/spm.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,469 copying build/lib/capsul/engine/module/matlab.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,472 copying build/lib/capsul/engine/module/attributes.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,475 copying build/lib/capsul/engine/module/freesurfer.py -> build/bdist.linux-armv7l/wheel/./capsul/engine/module 2025-05-31T09:17:07,478 creating build/bdist.linux-armv7l/wheel/capsul/utils 2025-05-31T09:17:07,479 creating build/bdist.linux-armv7l/wheel/capsul/utils/test 2025-05-31T09:17:07,481 copying build/lib/capsul/utils/test/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/utils/test 2025-05-31T09:17:07,482 copying build/lib/capsul/utils/test/test_utils.py -> build/bdist.linux-armv7l/wheel/./capsul/utils/test 2025-05-31T09:17:07,484 copying build/lib/capsul/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/utils 2025-05-31T09:17:07,486 copying build/lib/capsul/utils/finder.py -> build/bdist.linux-armv7l/wheel/./capsul/utils 2025-05-31T09:17:07,488 copying build/lib/capsul/utils/version_utils.py -> build/bdist.linux-armv7l/wheel/./capsul/utils 2025-05-31T09:17:07,491 creating build/bdist.linux-armv7l/wheel/capsul/in_context 2025-05-31T09:17:07,492 copying build/lib/capsul/in_context/nipype.py -> build/bdist.linux-armv7l/wheel/./capsul/in_context 2025-05-31T09:17:07,494 copying build/lib/capsul/in_context/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/in_context 2025-05-31T09:17:07,496 copying build/lib/capsul/in_context/fsl.py -> build/bdist.linux-armv7l/wheel/./capsul/in_context 2025-05-31T09:17:07,499 copying build/lib/capsul/in_context/ants.py -> build/bdist.linux-armv7l/wheel/./capsul/in_context 2025-05-31T09:17:07,501 copying build/lib/capsul/in_context/afni.py -> build/bdist.linux-armv7l/wheel/./capsul/in_context 2025-05-31T09:17:07,503 copying build/lib/capsul/in_context/mrtrix.py -> build/bdist.linux-armv7l/wheel/./capsul/in_context 2025-05-31T09:17:07,505 copying build/lib/capsul/in_context/spm.py -> build/bdist.linux-armv7l/wheel/./capsul/in_context 2025-05-31T09:17:07,508 copying build/lib/capsul/in_context/freesurfer.py -> build/bdist.linux-armv7l/wheel/./capsul/in_context 2025-05-31T09:17:07,511 creating build/bdist.linux-armv7l/wheel/capsul/study_config 2025-05-31T09:17:07,512 copying build/lib/capsul/study_config/memory.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config 2025-05-31T09:17:07,516 creating build/bdist.linux-armv7l/wheel/capsul/study_config/test 2025-05-31T09:17:07,517 copying build/lib/capsul/study_config/test/test_memory.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/test 2025-05-31T09:17:07,519 copying build/lib/capsul/study_config/test/test_study_config_configuration.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/test 2025-05-31T09:17:07,522 copying build/lib/capsul/study_config/test/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/test 2025-05-31T09:17:07,524 copying build/lib/capsul/study_config/test/test_soma_workflow_with_kw.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/test 2025-05-31T09:17:07,527 copying build/lib/capsul/study_config/test/test_study_config_fom.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/test 2025-05-31T09:17:07,529 copying build/lib/capsul/study_config/test/test_soma_workflow.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/test 2025-05-31T09:17:07,532 copying build/lib/capsul/study_config/test/test_fsl_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/test 2025-05-31T09:17:07,534 copying build/lib/capsul/study_config/test/test_run_in_study_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/test 2025-05-31T09:17:07,536 copying build/lib/capsul/study_config/test/test_run_process.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/test 2025-05-31T09:17:07,539 copying build/lib/capsul/study_config/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config 2025-05-31T09:17:07,541 copying build/lib/capsul/study_config/config_utils.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config 2025-05-31T09:17:07,543 copying build/lib/capsul/study_config/run.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config 2025-05-31T09:17:07,545 copying build/lib/capsul/study_config/process_instance.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config 2025-05-31T09:17:07,549 creating build/bdist.linux-armv7l/wheel/capsul/study_config/config_modules 2025-05-31T09:17:07,550 copying build/lib/capsul/study_config/config_modules/smartcaching_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,553 copying build/lib/capsul/study_config/config_modules/fsl_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,555 copying build/lib/capsul/study_config/config_modules/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,557 copying build/lib/capsul/study_config/config_modules/nipype_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,559 copying build/lib/capsul/study_config/config_modules/afni_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,562 copying build/lib/capsul/study_config/config_modules/mrtrix_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,564 copying build/lib/capsul/study_config/config_modules/matlab_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,566 copying build/lib/capsul/study_config/config_modules/spm_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,569 copying build/lib/capsul/study_config/config_modules/freesurfer_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,572 copying build/lib/capsul/study_config/config_modules/ants_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,575 copying build/lib/capsul/study_config/config_modules/attributes_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,578 copying build/lib/capsul/study_config/config_modules/brainvisa_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,580 copying build/lib/capsul/study_config/config_modules/somaworkflow_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,583 copying build/lib/capsul/study_config/config_modules/fom_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config/config_modules 2025-05-31T09:17:07,585 copying build/lib/capsul/study_config/study_config.py -> build/bdist.linux-armv7l/wheel/./capsul/study_config 2025-05-31T09:17:07,589 copying build/lib/capsul/run.py -> build/bdist.linux-armv7l/wheel/./capsul 2025-05-31T09:17:07,591 creating build/bdist.linux-armv7l/wheel/capsul/subprocess 2025-05-31T09:17:07,592 copying build/lib/capsul/subprocess/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/subprocess 2025-05-31T09:17:07,594 copying build/lib/capsul/subprocess/fsl.py -> build/bdist.linux-armv7l/wheel/./capsul/subprocess 2025-05-31T09:17:07,597 copying build/lib/capsul/subprocess/ants.py -> build/bdist.linux-armv7l/wheel/./capsul/subprocess 2025-05-31T09:17:07,600 copying build/lib/capsul/subprocess/afni.py -> build/bdist.linux-armv7l/wheel/./capsul/subprocess 2025-05-31T09:17:07,602 copying build/lib/capsul/subprocess/spm.py -> build/bdist.linux-armv7l/wheel/./capsul/subprocess 2025-05-31T09:17:07,605 creating build/bdist.linux-armv7l/wheel/capsul/attributes 2025-05-31T09:17:07,607 creating build/bdist.linux-armv7l/wheel/capsul/attributes/test 2025-05-31T09:17:07,609 copying build/lib/capsul/attributes/test/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/attributes/test 2025-05-31T09:17:07,610 copying build/lib/capsul/attributes/test/test_attributed_process.py -> build/bdist.linux-armv7l/wheel/./capsul/attributes/test 2025-05-31T09:17:07,614 copying build/lib/capsul/attributes/test/test_fom_process.py -> build/bdist.linux-armv7l/wheel/./capsul/attributes/test 2025-05-31T09:17:07,616 copying build/lib/capsul/attributes/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/attributes 2025-05-31T09:17:07,619 copying build/lib/capsul/attributes/attributes_schema.py -> build/bdist.linux-armv7l/wheel/./capsul/attributes 2025-05-31T09:17:07,621 copying build/lib/capsul/attributes/fom_completion_engine.py -> build/bdist.linux-armv7l/wheel/./capsul/attributes 2025-05-31T09:17:07,624 copying build/lib/capsul/attributes/completion_engine_factory.py -> build/bdist.linux-armv7l/wheel/./capsul/attributes 2025-05-31T09:17:07,626 copying build/lib/capsul/attributes/completion_engine_iteration.py -> build/bdist.linux-armv7l/wheel/./capsul/attributes 2025-05-31T09:17:07,628 copying build/lib/capsul/attributes/completion_engine.py -> build/bdist.linux-armv7l/wheel/./capsul/attributes 2025-05-31T09:17:07,632 copying build/lib/capsul/attributes/attributes_factory.py -> build/bdist.linux-armv7l/wheel/./capsul/attributes 2025-05-31T09:17:07,634 copying build/lib/capsul/info.py -> build/bdist.linux-armv7l/wheel/./capsul 2025-05-31T09:17:07,636 creating build/bdist.linux-armv7l/wheel/capsul/pipeline 2025-05-31T09:17:07,638 copying build/lib/capsul/pipeline/topological_sort.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,640 copying build/lib/capsul/pipeline/pipeline_tools.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,644 creating build/bdist.linux-armv7l/wheel/capsul/pipeline/test 2025-05-31T09:17:07,645 copying build/lib/capsul/pipeline/test/test_complex_pipeline_activations.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,649 copying build/lib/capsul/pipeline/test/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,650 copying build/lib/capsul/pipeline/test/test_switch_subpipeline_one.json -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,653 copying build/lib/capsul/pipeline/test/test_switch_pipeline.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,656 copying build/lib/capsul/pipeline/test/test_switch_subpipeline.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,659 copying build/lib/capsul/pipeline/test/test_qc_nodes.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,662 copying build/lib/capsul/pipeline/test/test_pipeline_parameters.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,665 copying build/lib/capsul/pipeline/test/test_custom_nodes.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,670 creating build/bdist.linux-armv7l/wheel/capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,671 copying build/lib/capsul/pipeline/test/fake_morphologist/normalization_t1_spm8_reinit.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,673 copying build/lib/capsul/pipeline/test/fake_morphologist/t1biascorrection.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,676 copying build/lib/capsul/pipeline/test/fake_morphologist/aimsconverter.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,678 copying build/lib/capsul/pipeline/test/fake_morphologist/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,680 copying build/lib/capsul/pipeline/test/fake_morphologist/fslnormalization.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,683 copying build/lib/capsul/pipeline/test/fake_morphologist/importt1mri.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,685 copying build/lib/capsul/pipeline/test/fake_morphologist/normalization_aimsmiregister.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,687 copying build/lib/capsul/pipeline/test/fake_morphologist/spmnormalization.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,690 copying build/lib/capsul/pipeline/test/fake_morphologist/talairachtransformation.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,692 copying build/lib/capsul/pipeline/test/fake_morphologist/reorientanatomy.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,694 copying build/lib/capsul/pipeline/test/fake_morphologist/sulcilabellingspamlocal.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,696 copying build/lib/capsul/pipeline/test/fake_morphologist/greywhiteclassificationhemi.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,698 copying build/lib/capsul/pipeline/test/fake_morphologist/greywhitetopology.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,700 copying build/lib/capsul/pipeline/test/fake_morphologist/brainorientation.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,703 copying build/lib/capsul/pipeline/test/fake_morphologist/sulcilabellingspam.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,705 copying build/lib/capsul/pipeline/test/fake_morphologist/sulciskeleton.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,707 copying build/lib/capsul/pipeline/test/fake_morphologist/sulcilabelling.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,710 copying build/lib/capsul/pipeline/test/fake_morphologist/fslnormalizationtoaims.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,712 copying build/lib/capsul/pipeline/test/fake_morphologist/normalization.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,715 copying build/lib/capsul/pipeline/test/fake_morphologist/morphologist.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,719 copying build/lib/capsul/pipeline/test/fake_morphologist/splitbrain.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,722 copying build/lib/capsul/pipeline/test/fake_morphologist/greywhitemesh.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,724 copying build/lib/capsul/pipeline/test/fake_morphologist/sulcideeplabeling.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,726 copying build/lib/capsul/pipeline/test/fake_morphologist/normalization_t1_spm12_reinit.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,728 copying build/lib/capsul/pipeline/test/fake_morphologist/spmsn3dtoaims.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,730 copying build/lib/capsul/pipeline/test/fake_morphologist/sulcilabellingann.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,732 copying build/lib/capsul/pipeline/test/fake_morphologist/scalpmesh.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,734 copying build/lib/capsul/pipeline/test/fake_morphologist/baladinnormalizationpipeline.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,736 copying build/lib/capsul/pipeline/test/fake_morphologist/baladinnormalizationtoaims.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,738 copying build/lib/capsul/pipeline/test/fake_morphologist/sulcigraph.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,740 copying build/lib/capsul/pipeline/test/fake_morphologist/acpcorientation.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,742 copying build/lib/capsul/pipeline/test/fake_morphologist/histoanalysis.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,744 copying build/lib/capsul/pipeline/test/fake_morphologist/normalizationskullstripped.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,747 copying build/lib/capsul/pipeline/test/fake_morphologist/talairachtransformationfromnormalization.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,749 copying build/lib/capsul/pipeline/test/fake_morphologist/normalization_baladin.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,751 copying build/lib/capsul/pipeline/test/fake_morphologist/skullstripping.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,753 copying build/lib/capsul/pipeline/test/fake_morphologist/brainsegmentation.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,756 copying build/lib/capsul/pipeline/test/fake_morphologist/sulcilabellingspammarkov.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,758 copying build/lib/capsul/pipeline/test/fake_morphologist/sulcilabellingspamglobal.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,760 copying build/lib/capsul/pipeline/test/fake_morphologist/sulcigraphmorphometrybysubject.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,762 copying build/lib/capsul/pipeline/test/fake_morphologist/pialmesh.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,764 copying build/lib/capsul/pipeline/test/fake_morphologist/normalization_fsl_reinit.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test/fake_morphologist 2025-05-31T09:17:07,766 copying build/lib/capsul/pipeline/test/test_temporary.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,769 copying build/lib/capsul/pipeline/test/test_process_iteration.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,772 copying build/lib/capsul/pipeline/test/test_proc_with_outputs.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,776 copying build/lib/capsul/pipeline/test/test_switch_subpipeline_two.json -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,779 copying build/lib/capsul/pipeline/test/test_iterative_process.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,782 copying build/lib/capsul/pipeline/test/test_activation.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,784 copying build/lib/capsul/pipeline/test/test_double_switch.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,787 copying build/lib/capsul/pipeline/test/test_pipeline_workflow.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,790 copying build/lib/capsul/pipeline/test/test_pipeline.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,792 copying build/lib/capsul/pipeline/test/test_pipeline_with_temp.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,795 copying build/lib/capsul/pipeline/test/test_switch_optional_output.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,797 copying build/lib/capsul/pipeline/test/test_optional_output_switch.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/test 2025-05-31T09:17:07,800 copying build/lib/capsul/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,802 copying build/lib/capsul/pipeline/process_iteration.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,805 creating build/bdist.linux-armv7l/wheel/capsul/pipeline/custom_nodes 2025-05-31T09:17:07,806 copying build/lib/capsul/pipeline/custom_nodes/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/custom_nodes 2025-05-31T09:17:07,809 copying build/lib/capsul/pipeline/custom_nodes/strconv.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/custom_nodes 2025-05-31T09:17:07,811 copying build/lib/capsul/pipeline/custom_nodes/loo_node.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/custom_nodes 2025-05-31T09:17:07,813 copying build/lib/capsul/pipeline/custom_nodes/strcat_node.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/custom_nodes 2025-05-31T09:17:07,816 copying build/lib/capsul/pipeline/custom_nodes/cv_node.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/custom_nodes 2025-05-31T09:17:07,818 copying build/lib/capsul/pipeline/custom_nodes/reduce_node.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/custom_nodes 2025-05-31T09:17:07,822 copying build/lib/capsul/pipeline/custom_nodes/map_node.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline/custom_nodes 2025-05-31T09:17:07,824 copying build/lib/capsul/pipeline/python_export.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,827 copying build/lib/capsul/pipeline/pipeline_workflow.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,831 copying build/lib/capsul/pipeline/xml.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,834 copying build/lib/capsul/pipeline/pipeline.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,845 copying build/lib/capsul/pipeline/json_io.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,848 copying build/lib/capsul/pipeline/pipeline_nodes.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,853 copying build/lib/capsul/pipeline/pipeline_construction.py -> build/bdist.linux-armv7l/wheel/./capsul/pipeline 2025-05-31T09:17:07,856 creating build/bdist.linux-armv7l/wheel/capsul/qt_gui 2025-05-31T09:17:07,858 creating build/bdist.linux-armv7l/wheel/capsul/qt_gui/test 2025-05-31T09:17:07,860 copying build/lib/capsul/qt_gui/test/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/test 2025-05-31T09:17:07,862 copying build/lib/capsul/qt_gui/test/test_board_widget.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/test 2025-05-31T09:17:07,864 copying build/lib/capsul/qt_gui/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui 2025-05-31T09:17:07,866 copying build/lib/capsul/qt_gui/board_widget.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui 2025-05-31T09:17:07,870 creating build/bdist.linux-armv7l/wheel/capsul/qt_gui/widgets 2025-05-31T09:17:07,871 copying build/lib/capsul/qt_gui/widgets/links_debugger.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/widgets 2025-05-31T09:17:07,874 copying build/lib/capsul/qt_gui/widgets/pipeline_file_warning_widget.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/widgets 2025-05-31T09:17:07,878 copying build/lib/capsul/qt_gui/widgets/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/widgets 2025-05-31T09:17:07,880 copying build/lib/capsul/qt_gui/widgets/pipeline_developer_view.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/widgets 2025-05-31T09:17:07,888 copying build/lib/capsul/qt_gui/widgets/attributed_process_widget.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/widgets 2025-05-31T09:17:07,891 copying build/lib/capsul/qt_gui/widgets/pipeline_user_view.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/widgets 2025-05-31T09:17:07,893 copying build/lib/capsul/qt_gui/widgets/viewer_widget.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/widgets 2025-05-31T09:17:07,895 copying build/lib/capsul/qt_gui/widgets/activation_inspector.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/widgets 2025-05-31T09:17:07,898 copying build/lib/capsul/qt_gui/widgets/pipeline_developper_view.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/widgets 2025-05-31T09:17:07,900 copying build/lib/capsul/qt_gui/widgets/settings_editor.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_gui/widgets 2025-05-31T09:17:07,904 creating build/bdist.linux-armv7l/wheel/capsul/plugins 2025-05-31T09:17:07,905 copying build/lib/capsul/plugins/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/plugins 2025-05-31T09:17:07,908 copying build/lib/capsul/__main__.py -> build/bdist.linux-armv7l/wheel/./capsul 2025-05-31T09:17:07,910 creating build/bdist.linux-armv7l/wheel/capsul/process 2025-05-31T09:17:07,912 creating build/bdist.linux-armv7l/wheel/capsul/process/test 2025-05-31T09:17:07,914 copying build/lib/capsul/process/test/xml_pipeline.xml -> build/bdist.linux-armv7l/wheel/./capsul/process/test 2025-05-31T09:17:07,916 copying build/lib/capsul/process/test/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/process/test 2025-05-31T09:17:07,918 copying build/lib/capsul/process/test/test_runprocess.py -> build/bdist.linux-armv7l/wheel/./capsul/process/test 2025-05-31T09:17:07,921 copying build/lib/capsul/process/test/test_pipeline.xml -> build/bdist.linux-armv7l/wheel/./capsul/process/test 2025-05-31T09:17:07,923 copying build/lib/capsul/process/test/test_traits.py -> build/bdist.linux-armv7l/wheel/./capsul/process/test 2025-05-31T09:17:07,925 copying build/lib/capsul/process/test/test_nipype_wrap.py -> build/bdist.linux-armv7l/wheel/./capsul/process/test 2025-05-31T09:17:07,928 copying build/lib/capsul/process/test/test_load_from_description.py -> build/bdist.linux-armv7l/wheel/./capsul/process/test 2025-05-31T09:17:07,931 copying build/lib/capsul/process/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/process 2025-05-31T09:17:07,933 copying build/lib/capsul/process/process.py -> build/bdist.linux-armv7l/wheel/./capsul/process 2025-05-31T09:17:07,938 copying build/lib/capsul/process/nipype_process.py -> build/bdist.linux-armv7l/wheel/./capsul/process 2025-05-31T09:17:07,941 copying build/lib/capsul/process/xml.py -> build/bdist.linux-armv7l/wheel/./capsul/process 2025-05-31T09:17:07,943 copying build/lib/capsul/process/runprocess.py -> build/bdist.linux-armv7l/wheel/./capsul/process 2025-05-31T09:17:07,947 creating build/bdist.linux-armv7l/wheel/capsul/qt_apps 2025-05-31T09:17:07,950 creating build/bdist.linux-armv7l/wheel/capsul/qt_apps/resources 2025-05-31T09:17:07,951 copying build/lib/capsul/qt_apps/resources/readme.txt -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,954 copying build/lib/capsul/qt_apps/resources/search.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,956 copying build/lib/capsul/qt_apps/resources/change_view.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,961 copying build/lib/capsul/qt_apps/resources/inspect.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,964 copying build/lib/capsul/qt_apps/resources/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,966 copying build/lib/capsul/qt_apps/resources/controller.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,969 copying build/lib/capsul/qt_apps/resources/view_result.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,972 copying build/lib/capsul/qt_apps/resources/open.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,975 copying build/lib/capsul/qt_apps/resources/exit.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,978 copying build/lib/capsul/qt_apps/resources/capsul.ui -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,981 copying build/lib/capsul/qt_apps/resources/play.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,984 copying build/lib/capsul/qt_apps/resources/logo.gif -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,991 copying build/lib/capsul/qt_apps/resources/transfer.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:07,996 copying build/lib/capsul/qt_apps/resources/logo.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:08,002 copying build/lib/capsul/qt_apps/resources/icones.qrc -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:08,004 copying build/lib/capsul/qt_apps/resources/config.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:08,019 copying build/lib/capsul/qt_apps/resources/icones.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:08,046 copying build/lib/capsul/qt_apps/resources/help.png -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/resources 2025-05-31T09:17:08,049 copying build/lib/capsul/qt_apps/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps 2025-05-31T09:17:08,051 copying build/lib/capsul/qt_apps/main_window.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps 2025-05-31T09:17:08,054 creating build/bdist.linux-armv7l/wheel/capsul/qt_apps/utils 2025-05-31T09:17:08,055 copying build/lib/capsul/qt_apps/utils/fill_treectrl.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/utils 2025-05-31T09:17:08,057 copying build/lib/capsul/qt_apps/utils/find_pipelines.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/utils 2025-05-31T09:17:08,060 copying build/lib/capsul/qt_apps/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/utils 2025-05-31T09:17:08,061 copying build/lib/capsul/qt_apps/utils/application.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/utils 2025-05-31T09:17:08,064 copying build/lib/capsul/qt_apps/utils/window.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps/utils 2025-05-31T09:17:08,065 copying build/lib/capsul/qt_apps/pipeline_viewer_app.py -> build/bdist.linux-armv7l/wheel/./capsul/qt_apps 2025-05-31T09:17:08,068 creating build/bdist.linux-armv7l/wheel/capsul/sphinxext 2025-05-31T09:17:08,069 copying build/lib/capsul/sphinxext/capsul_sphinx_layout.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext 2025-05-31T09:17:08,071 copying build/lib/capsul/sphinxext/pipelinedocgen.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext 2025-05-31T09:17:08,075 creating build/bdist.linux-armv7l/wheel/capsul/sphinxext/test 2025-05-31T09:17:08,076 copying build/lib/capsul/sphinxext/test/test_usercases_doc.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext/test 2025-05-31T09:17:08,078 copying build/lib/capsul/sphinxext/test/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext/test 2025-05-31T09:17:08,080 copying build/lib/capsul/sphinxext/test/test_process_pipeline_doc.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext/test 2025-05-31T09:17:08,082 copying build/lib/capsul/sphinxext/__init__.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext 2025-05-31T09:17:08,085 copying build/lib/capsul/sphinxext/capsul_usecases_rst.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext 2025-05-31T09:17:08,087 copying build/lib/capsul/sphinxext/capsul_pipeline_rst.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext 2025-05-31T09:17:08,089 copying build/lib/capsul/sphinxext/usecasesdocgen.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext 2025-05-31T09:17:08,092 copying build/lib/capsul/sphinxext/layoutdocgen.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext 2025-05-31T09:17:08,094 copying build/lib/capsul/sphinxext/load_pilots.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext 2025-05-31T09:17:08,096 copying build/lib/capsul/sphinxext/capsul_pipeline_view.py -> build/bdist.linux-armv7l/wheel/./capsul/sphinxext 2025-05-31T09:17:08,099 copying build/lib/capsul/api.py -> build/bdist.linux-armv7l/wheel/./capsul 2025-05-31T09:17:08,101 running install_egg_info 2025-05-31T09:17:08,137 running egg_info 2025-05-31T09:17:08,164 writing capsul.egg-info/PKG-INFO 2025-05-31T09:17:08,170 writing dependency_links to capsul.egg-info/dependency_links.txt 2025-05-31T09:17:08,175 writing requirements to capsul.egg-info/requires.txt 2025-05-31T09:17:08,176 writing top-level names to capsul.egg-info/top_level.txt 2025-05-31T09:17:08,240 reading manifest file 'capsul.egg-info/SOURCES.txt' 2025-05-31T09:17:08,267 reading manifest template 'MANIFEST.in' 2025-05-31T09:17:08,268 warning: no files found matching 'README.txt' 2025-05-31T09:17:08,268 warning: no files found matching 'ez_setup.py' 2025-05-31T09:17:08,296 warning: no previously-included files matching '*.*~' found under directory 'doc/source' 2025-05-31T09:17:08,297 no previously-included directories found matching 'doc/source/*/generated' 2025-05-31T09:17:08,298 adding license file 'LICENSE' 2025-05-31T09:17:08,315 writing manifest file 'capsul.egg-info/SOURCES.txt' 2025-05-31T09:17:08,317 Copying capsul.egg-info to build/bdist.linux-armv7l/wheel/./capsul-2.6.0-py3.11.egg-info 2025-05-31T09:17:08,327 running install_scripts 2025-05-31T09:17:08,329 creating build/bdist.linux-armv7l/wheel/capsul-2.6.0.data/scripts 2025-05-31T09:17:08,330 copying build/scripts-3.11/capsulview -> build/bdist.linux-armv7l/wheel/capsul-2.6.0.data/scripts 2025-05-31T09:17:08,332 changing mode of build/bdist.linux-armv7l/wheel/capsul-2.6.0.data/scripts/capsulview to 755 2025-05-31T09:17:08,345 creating build/bdist.linux-armv7l/wheel/capsul-2.6.0.dist-info/WHEEL 2025-05-31T09:17:08,347 creating '/tmp/pip-wheel-1iib073y/capsul-2.6.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-05-31T09:17:08,350 adding 'capsul/__init__.py' 2025-05-31T09:17:08,351 adding 'capsul/__main__.py' 2025-05-31T09:17:08,353 adding 'capsul/api.py' 2025-05-31T09:17:08,355 adding 'capsul/info.py' 2025-05-31T09:17:08,356 adding 'capsul/run.py' 2025-05-31T09:17:08,358 adding 'capsul/attributes/__init__.py' 2025-05-31T09:17:08,360 adding 'capsul/attributes/attributes_factory.py' 2025-05-31T09:17:08,362 adding 'capsul/attributes/attributes_schema.py' 2025-05-31T09:17:08,368 adding 'capsul/attributes/completion_engine.py' 2025-05-31T09:17:08,370 adding 'capsul/attributes/completion_engine_factory.py' 2025-05-31T09:17:08,372 adding 'capsul/attributes/completion_engine_iteration.py' 2025-05-31T09:17:08,375 adding 'capsul/attributes/fom_completion_engine.py' 2025-05-31T09:17:08,377 adding 'capsul/attributes/test/__init__.py' 2025-05-31T09:17:08,379 adding 'capsul/attributes/test/test_attributed_process.py' 2025-05-31T09:17:08,381 adding 'capsul/attributes/test/test_fom_process.py' 2025-05-31T09:17:08,386 adding 'capsul/engine/__init__.py' 2025-05-31T09:17:08,387 adding 'capsul/engine/database.py' 2025-05-31T09:17:08,389 adding 'capsul/engine/database_json.py' 2025-05-31T09:17:08,391 adding 'capsul/engine/database_populse.py' 2025-05-31T09:17:08,393 adding 'capsul/engine/run.py' 2025-05-31T09:17:08,397 adding 'capsul/engine/settings.py' 2025-05-31T09:17:08,399 adding 'capsul/engine/write_engine_config.py' 2025-05-31T09:17:08,401 adding 'capsul/engine/module/__init__.py' 2025-05-31T09:17:08,402 adding 'capsul/engine/module/afni.py' 2025-05-31T09:17:08,404 adding 'capsul/engine/module/ants.py' 2025-05-31T09:17:08,405 adding 'capsul/engine/module/attributes.py' 2025-05-31T09:17:08,407 adding 'capsul/engine/module/axon.py' 2025-05-31T09:17:08,409 adding 'capsul/engine/module/fom.py' 2025-05-31T09:17:08,411 adding 'capsul/engine/module/freesurfer.py' 2025-05-31T09:17:08,413 adding 'capsul/engine/module/fsl.py' 2025-05-31T09:17:08,414 adding 'capsul/engine/module/matlab.py' 2025-05-31T09:17:08,416 adding 'capsul/engine/module/mrtrix.py' 2025-05-31T09:17:08,417 adding 'capsul/engine/module/nipype.py' 2025-05-31T09:17:08,419 adding 'capsul/engine/module/python.py' 2025-05-31T09:17:08,420 adding 'capsul/engine/module/somaworkflow.py' 2025-05-31T09:17:08,423 adding 'capsul/engine/module/spm.py' 2025-05-31T09:17:08,424 adding 'capsul/engine/test/__init__.py' 2025-05-31T09:17:08,427 adding 'capsul/engine/test/test_capsul_engine.py' 2025-05-31T09:17:08,429 adding 'capsul/in_context/__init__.py' 2025-05-31T09:17:08,430 adding 'capsul/in_context/afni.py' 2025-05-31T09:17:08,431 adding 'capsul/in_context/ants.py' 2025-05-31T09:17:08,433 adding 'capsul/in_context/freesurfer.py' 2025-05-31T09:17:08,434 adding 'capsul/in_context/fsl.py' 2025-05-31T09:17:08,436 adding 'capsul/in_context/mrtrix.py' 2025-05-31T09:17:08,437 adding 'capsul/in_context/nipype.py' 2025-05-31T09:17:08,439 adding 'capsul/in_context/spm.py' 2025-05-31T09:17:08,440 adding 'capsul/pipeline/__init__.py' 2025-05-31T09:17:08,443 adding 'capsul/pipeline/json_io.py' 2025-05-31T09:17:08,458 adding 'capsul/pipeline/pipeline.py' 2025-05-31T09:17:08,460 adding 'capsul/pipeline/pipeline_construction.py' 2025-05-31T09:17:08,467 adding 'capsul/pipeline/pipeline_nodes.py' 2025-05-31T09:17:08,475 adding 'capsul/pipeline/pipeline_tools.py' 2025-05-31T09:17:08,484 adding 'capsul/pipeline/pipeline_workflow.py' 2025-05-31T09:17:08,487 adding 'capsul/pipeline/process_iteration.py' 2025-05-31T09:17:08,489 adding 'capsul/pipeline/python_export.py' 2025-05-31T09:17:08,491 adding 'capsul/pipeline/topological_sort.py' 2025-05-31T09:17:08,495 adding 'capsul/pipeline/xml.py' 2025-05-31T09:17:08,497 adding 'capsul/pipeline/custom_nodes/__init__.py' 2025-05-31T09:17:08,498 adding 'capsul/pipeline/custom_nodes/cv_node.py' 2025-05-31T09:17:08,500 adding 'capsul/pipeline/custom_nodes/loo_node.py' 2025-05-31T09:17:08,501 adding 'capsul/pipeline/custom_nodes/map_node.py' 2025-05-31T09:17:08,503 adding 'capsul/pipeline/custom_nodes/reduce_node.py' 2025-05-31T09:17:08,505 adding 'capsul/pipeline/custom_nodes/strcat_node.py' 2025-05-31T09:17:08,506 adding 'capsul/pipeline/custom_nodes/strconv.py' 2025-05-31T09:17:08,508 adding 'capsul/pipeline/test/__init__.py' 2025-05-31T09:17:08,510 adding 'capsul/pipeline/test/test_activation.py' 2025-05-31T09:17:08,512 adding 'capsul/pipeline/test/test_complex_pipeline_activations.py' 2025-05-31T09:17:08,516 adding 'capsul/pipeline/test/test_custom_nodes.py' 2025-05-31T09:17:08,517 adding 'capsul/pipeline/test/test_double_switch.py' 2025-05-31T09:17:08,519 adding 'capsul/pipeline/test/test_iterative_process.py' 2025-05-31T09:17:08,521 adding 'capsul/pipeline/test/test_optional_output_switch.py' 2025-05-31T09:17:08,523 adding 'capsul/pipeline/test/test_pipeline.py' 2025-05-31T09:17:08,525 adding 'capsul/pipeline/test/test_pipeline_parameters.py' 2025-05-31T09:17:08,527 adding 'capsul/pipeline/test/test_pipeline_with_temp.py' 2025-05-31T09:17:08,529 adding 'capsul/pipeline/test/test_pipeline_workflow.py' 2025-05-31T09:17:08,531 adding 'capsul/pipeline/test/test_proc_with_outputs.py' 2025-05-31T09:17:08,533 adding 'capsul/pipeline/test/test_process_iteration.py' 2025-05-31T09:17:08,535 adding 'capsul/pipeline/test/test_qc_nodes.py' 2025-05-31T09:17:08,536 adding 'capsul/pipeline/test/test_switch_optional_output.py' 2025-05-31T09:17:08,538 adding 'capsul/pipeline/test/test_switch_pipeline.py' 2025-05-31T09:17:08,540 adding 'capsul/pipeline/test/test_switch_subpipeline.py' 2025-05-31T09:17:08,541 adding 'capsul/pipeline/test/test_switch_subpipeline_one.json' 2025-05-31T09:17:08,543 adding 'capsul/pipeline/test/test_switch_subpipeline_two.json' 2025-05-31T09:17:08,545 adding 'capsul/pipeline/test/test_temporary.py' 2025-05-31T09:17:08,547 adding 'capsul/pipeline/test/fake_morphologist/__init__.py' 2025-05-31T09:17:08,548 adding 'capsul/pipeline/test/fake_morphologist/acpcorientation.py' 2025-05-31T09:17:08,549 adding 'capsul/pipeline/test/fake_morphologist/aimsconverter.py' 2025-05-31T09:17:08,551 adding 'capsul/pipeline/test/fake_morphologist/baladinnormalizationpipeline.py' 2025-05-31T09:17:08,552 adding 'capsul/pipeline/test/fake_morphologist/baladinnormalizationtoaims.py' 2025-05-31T09:17:08,554 adding 'capsul/pipeline/test/fake_morphologist/brainorientation.py' 2025-05-31T09:17:08,555 adding 'capsul/pipeline/test/fake_morphologist/brainsegmentation.py' 2025-05-31T09:17:08,557 adding 'capsul/pipeline/test/fake_morphologist/fslnormalization.py' 2025-05-31T09:17:08,558 adding 'capsul/pipeline/test/fake_morphologist/fslnormalizationtoaims.py' 2025-05-31T09:17:08,560 adding 'capsul/pipeline/test/fake_morphologist/greywhiteclassificationhemi.py' 2025-05-31T09:17:08,561 adding 'capsul/pipeline/test/fake_morphologist/greywhitemesh.py' 2025-05-31T09:17:08,562 adding 'capsul/pipeline/test/fake_morphologist/greywhitetopology.py' 2025-05-31T09:17:08,564 adding 'capsul/pipeline/test/fake_morphologist/histoanalysis.py' 2025-05-31T09:17:08,565 adding 'capsul/pipeline/test/fake_morphologist/importt1mri.py' 2025-05-31T09:17:08,571 adding 'capsul/pipeline/test/fake_morphologist/morphologist.py' 2025-05-31T09:17:08,574 adding 'capsul/pipeline/test/fake_morphologist/normalization.py' 2025-05-31T09:17:08,575 adding 'capsul/pipeline/test/fake_morphologist/normalization_aimsmiregister.py' 2025-05-31T09:17:08,576 adding 'capsul/pipeline/test/fake_morphologist/normalization_baladin.py' 2025-05-31T09:17:08,578 adding 'capsul/pipeline/test/fake_morphologist/normalization_fsl_reinit.py' 2025-05-31T09:17:08,580 adding 'capsul/pipeline/test/fake_morphologist/normalization_t1_spm12_reinit.py' 2025-05-31T09:17:08,581 adding 'capsul/pipeline/test/fake_morphologist/normalization_t1_spm8_reinit.py' 2025-05-31T09:17:08,583 adding 'capsul/pipeline/test/fake_morphologist/normalizationskullstripped.py' 2025-05-31T09:17:08,584 adding 'capsul/pipeline/test/fake_morphologist/pialmesh.py' 2025-05-31T09:17:08,586 adding 'capsul/pipeline/test/fake_morphologist/reorientanatomy.py' 2025-05-31T09:17:08,587 adding 'capsul/pipeline/test/fake_morphologist/scalpmesh.py' 2025-05-31T09:17:08,588 adding 'capsul/pipeline/test/fake_morphologist/skullstripping.py' 2025-05-31T09:17:08,590 adding 'capsul/pipeline/test/fake_morphologist/splitbrain.py' 2025-05-31T09:17:08,591 adding 'capsul/pipeline/test/fake_morphologist/spmnormalization.py' 2025-05-31T09:17:08,593 adding 'capsul/pipeline/test/fake_morphologist/spmsn3dtoaims.py' 2025-05-31T09:17:08,594 adding 'capsul/pipeline/test/fake_morphologist/sulcideeplabeling.py' 2025-05-31T09:17:08,595 adding 'capsul/pipeline/test/fake_morphologist/sulcigraph.py' 2025-05-31T09:17:08,597 adding 'capsul/pipeline/test/fake_morphologist/sulcigraphmorphometrybysubject.py' 2025-05-31T09:17:08,598 adding 'capsul/pipeline/test/fake_morphologist/sulcilabelling.py' 2025-05-31T09:17:08,600 adding 'capsul/pipeline/test/fake_morphologist/sulcilabellingann.py' 2025-05-31T09:17:08,601 adding 'capsul/pipeline/test/fake_morphologist/sulcilabellingspam.py' 2025-05-31T09:17:08,603 adding 'capsul/pipeline/test/fake_morphologist/sulcilabellingspamglobal.py' 2025-05-31T09:17:08,604 adding 'capsul/pipeline/test/fake_morphologist/sulcilabellingspamlocal.py' 2025-05-31T09:17:08,606 adding 'capsul/pipeline/test/fake_morphologist/sulcilabellingspammarkov.py' 2025-05-31T09:17:08,607 adding 'capsul/pipeline/test/fake_morphologist/sulciskeleton.py' 2025-05-31T09:17:08,609 adding 'capsul/pipeline/test/fake_morphologist/t1biascorrection.py' 2025-05-31T09:17:08,610 adding 'capsul/pipeline/test/fake_morphologist/talairachtransformation.py' 2025-05-31T09:17:08,612 adding 'capsul/pipeline/test/fake_morphologist/talairachtransformationfromnormalization.py' 2025-05-31T09:17:08,613 adding 'capsul/plugins/__init__.py' 2025-05-31T09:17:08,615 adding 'capsul/process/__init__.py' 2025-05-31T09:17:08,617 adding 'capsul/process/nipype_process.py' 2025-05-31T09:17:08,628 adding 'capsul/process/process.py' 2025-05-31T09:17:08,633 adding 'capsul/process/runprocess.py' 2025-05-31T09:17:08,634 adding 'capsul/process/xml.py' 2025-05-31T09:17:08,636 adding 'capsul/process/test/__init__.py' 2025-05-31T09:17:08,638 adding 'capsul/process/test/test_load_from_description.py' 2025-05-31T09:17:08,639 adding 'capsul/process/test/test_nipype_wrap.py' 2025-05-31T09:17:08,641 adding 'capsul/process/test/test_pipeline.xml' 2025-05-31T09:17:08,642 adding 'capsul/process/test/test_runprocess.py' 2025-05-31T09:17:08,643 adding 'capsul/process/test/test_traits.py' 2025-05-31T09:17:08,645 adding 'capsul/process/test/xml_pipeline.xml' 2025-05-31T09:17:08,646 adding 'capsul/qt_apps/__init__.py' 2025-05-31T09:17:08,649 adding 'capsul/qt_apps/main_window.py' 2025-05-31T09:17:08,650 adding 'capsul/qt_apps/pipeline_viewer_app.py' 2025-05-31T09:17:08,652 adding 'capsul/qt_apps/resources/__init__.py' 2025-05-31T09:17:08,654 adding 'capsul/qt_apps/resources/capsul.ui' 2025-05-31T09:17:08,662 adding 'capsul/qt_apps/resources/change_view.png' 2025-05-31T09:17:08,665 adding 'capsul/qt_apps/resources/config.png' 2025-05-31T09:17:08,671 adding 'capsul/qt_apps/resources/controller.png' 2025-05-31T09:17:08,674 adding 'capsul/qt_apps/resources/exit.png' 2025-05-31T09:17:08,676 adding 'capsul/qt_apps/resources/help.png' 2025-05-31T09:17:09,351 adding 'capsul/qt_apps/resources/icones.py' 2025-05-31T09:17:09,361 adding 'capsul/qt_apps/resources/icones.qrc' 2025-05-31T09:17:09,364 adding 'capsul/qt_apps/resources/inspect.png' 2025-05-31T09:17:09,393 adding 'capsul/qt_apps/resources/logo.gif' 2025-05-31T09:17:09,417 adding 'capsul/qt_apps/resources/logo.png' 2025-05-31T09:17:09,420 adding 'capsul/qt_apps/resources/open.png' 2025-05-31T09:17:09,423 adding 'capsul/qt_apps/resources/play.png' 2025-05-31T09:17:09,424 adding 'capsul/qt_apps/resources/readme.txt' 2025-05-31T09:17:09,426 adding 'capsul/qt_apps/resources/search.png' 2025-05-31T09:17:09,428 adding 'capsul/qt_apps/resources/transfer.png' 2025-05-31T09:17:09,430 adding 'capsul/qt_apps/resources/view_result.png' 2025-05-31T09:17:09,431 adding 'capsul/qt_apps/utils/__init__.py' 2025-05-31T09:17:09,433 adding 'capsul/qt_apps/utils/application.py' 2025-05-31T09:17:09,434 adding 'capsul/qt_apps/utils/fill_treectrl.py' 2025-05-31T09:17:09,436 adding 'capsul/qt_apps/utils/find_pipelines.py' 2025-05-31T09:17:09,437 adding 'capsul/qt_apps/utils/window.py' 2025-05-31T09:17:09,439 adding 'capsul/qt_gui/__init__.py' 2025-05-31T09:17:09,441 adding 'capsul/qt_gui/board_widget.py' 2025-05-31T09:17:09,443 adding 'capsul/qt_gui/test/__init__.py' 2025-05-31T09:17:09,444 adding 'capsul/qt_gui/test/test_board_widget.py' 2025-05-31T09:17:09,446 adding 'capsul/qt_gui/widgets/__init__.py' 2025-05-31T09:17:09,449 adding 'capsul/qt_gui/widgets/activation_inspector.py' 2025-05-31T09:17:09,452 adding 'capsul/qt_gui/widgets/attributed_process_widget.py' 2025-05-31T09:17:09,454 adding 'capsul/qt_gui/widgets/links_debugger.py' 2025-05-31T09:17:09,479 adding 'capsul/qt_gui/widgets/pipeline_developer_view.py' 2025-05-31T09:17:09,481 adding 'capsul/qt_gui/widgets/pipeline_developper_view.py' 2025-05-31T09:17:09,482 adding 'capsul/qt_gui/widgets/pipeline_file_warning_widget.py' 2025-05-31T09:17:09,484 adding 'capsul/qt_gui/widgets/pipeline_user_view.py' 2025-05-31T09:17:09,485 adding 'capsul/qt_gui/widgets/settings_editor.py' 2025-05-31T09:17:09,487 adding 'capsul/qt_gui/widgets/viewer_widget.py' 2025-05-31T09:17:09,489 adding 'capsul/sphinxext/__init__.py' 2025-05-31T09:17:09,490 adding 'capsul/sphinxext/capsul_pipeline_rst.py' 2025-05-31T09:17:09,491 adding 'capsul/sphinxext/capsul_pipeline_view.py' 2025-05-31T09:17:09,493 adding 'capsul/sphinxext/capsul_sphinx_layout.py' 2025-05-31T09:17:09,494 adding 'capsul/sphinxext/capsul_usecases_rst.py' 2025-05-31T09:17:09,495 adding 'capsul/sphinxext/layoutdocgen.py' 2025-05-31T09:17:09,497 adding 'capsul/sphinxext/load_pilots.py' 2025-05-31T09:17:09,499 adding 'capsul/sphinxext/pipelinedocgen.py' 2025-05-31T09:17:09,500 adding 'capsul/sphinxext/usecasesdocgen.py' 2025-05-31T09:17:09,502 adding 'capsul/sphinxext/test/__init__.py' 2025-05-31T09:17:09,503 adding 'capsul/sphinxext/test/test_process_pipeline_doc.py' 2025-05-31T09:17:09,505 adding 'capsul/sphinxext/test/test_usercases_doc.py' 2025-05-31T09:17:09,506 adding 'capsul/study_config/__init__.py' 2025-05-31T09:17:09,508 adding 'capsul/study_config/config_utils.py' 2025-05-31T09:17:09,512 adding 'capsul/study_config/memory.py' 2025-05-31T09:17:09,515 adding 'capsul/study_config/process_instance.py' 2025-05-31T09:17:09,517 adding 'capsul/study_config/run.py' 2025-05-31T09:17:09,521 adding 'capsul/study_config/study_config.py' 2025-05-31T09:17:09,523 adding 'capsul/study_config/config_modules/__init__.py' 2025-05-31T09:17:09,524 adding 'capsul/study_config/config_modules/afni_config.py' 2025-05-31T09:17:09,528 adding 'capsul/study_config/config_modules/ants_config.py' 2025-05-31T09:17:09,529 adding 'capsul/study_config/config_modules/attributes_config.py' 2025-05-31T09:17:09,531 adding 'capsul/study_config/config_modules/brainvisa_config.py' 2025-05-31T09:17:09,532 adding 'capsul/study_config/config_modules/fom_config.py' 2025-05-31T09:17:09,534 adding 'capsul/study_config/config_modules/freesurfer_config.py' 2025-05-31T09:17:09,536 adding 'capsul/study_config/config_modules/fsl_config.py' 2025-05-31T09:17:09,537 adding 'capsul/study_config/config_modules/matlab_config.py' 2025-05-31T09:17:09,539 adding 'capsul/study_config/config_modules/mrtrix_config.py' 2025-05-31T09:17:09,540 adding 'capsul/study_config/config_modules/nipype_config.py' 2025-05-31T09:17:09,542 adding 'capsul/study_config/config_modules/smartcaching_config.py' 2025-05-31T09:17:09,543 adding 'capsul/study_config/config_modules/somaworkflow_config.py' 2025-05-31T09:17:09,546 adding 'capsul/study_config/config_modules/spm_config.py' 2025-05-31T09:17:09,547 adding 'capsul/study_config/test/__init__.py' 2025-05-31T09:17:09,549 adding 'capsul/study_config/test/test_fsl_config.py' 2025-05-31T09:17:09,551 adding 'capsul/study_config/test/test_memory.py' 2025-05-31T09:17:09,552 adding 'capsul/study_config/test/test_run_in_study_config.py' 2025-05-31T09:17:09,554 adding 'capsul/study_config/test/test_run_process.py' 2025-05-31T09:17:09,555 adding 'capsul/study_config/test/test_soma_workflow.py' 2025-05-31T09:17:09,557 adding 'capsul/study_config/test/test_soma_workflow_with_kw.py' 2025-05-31T09:17:09,560 adding 'capsul/study_config/test/test_study_config_configuration.py' 2025-05-31T09:17:09,561 adding 'capsul/study_config/test/test_study_config_fom.py' 2025-05-31T09:17:09,563 adding 'capsul/subprocess/__init__.py' 2025-05-31T09:17:09,565 adding 'capsul/subprocess/afni.py' 2025-05-31T09:17:09,566 adding 'capsul/subprocess/ants.py' 2025-05-31T09:17:09,568 adding 'capsul/subprocess/fsl.py' 2025-05-31T09:17:09,570 adding 'capsul/subprocess/spm.py' 2025-05-31T09:17:09,572 adding 'capsul/test/__init__.py' 2025-05-31T09:17:09,574 adding 'capsul/test/__main__.py' 2025-05-31T09:17:09,575 adding 'capsul/test/coverage.py' 2025-05-31T09:17:09,577 adding 'capsul/test/test_capsul_modules_import.py' 2025-05-31T09:17:09,578 adding 'capsul/test/test_capsul_notebooks.py' 2025-05-31T09:17:09,580 adding 'capsul/utils/__init__.py' 2025-05-31T09:17:09,581 adding 'capsul/utils/finder.py' 2025-05-31T09:17:09,583 adding 'capsul/utils/version_utils.py' 2025-05-31T09:17:09,584 adding 'capsul/utils/test/__init__.py' 2025-05-31T09:17:09,586 adding 'capsul/utils/test/test_utils.py' 2025-05-31T09:17:09,588 adding 'capsul-2.6.0.data/scripts/capsulview' 2025-05-31T09:17:09,593 adding 'capsul-2.6.0.dist-info/licenses/LICENSE' 2025-05-31T09:17:09,594 adding 'capsul-2.6.0.dist-info/METADATA' 2025-05-31T09:17:09,595 adding 'capsul-2.6.0.dist-info/WHEEL' 2025-05-31T09:17:09,596 adding 'capsul-2.6.0.dist-info/top_level.txt' 2025-05-31T09:17:09,600 adding 'capsul-2.6.0.dist-info/RECORD' 2025-05-31T09:17:09,678 removing build/bdist.linux-armv7l/wheel 2025-05-31T09:17:09,857 Building wheel for capsul (setup.py): finished with status 'done' 2025-05-31T09:17:09,878 Created wheel for capsul: filename=capsul-2.6.0-py3-none-any.whl size=1867983 sha256=cc73a5be131c43704a9fd2177928c08061cf0394d26446e104c421af321a6a2e 2025-05-31T09:17:09,879 Stored in directory: /tmp/pip-ephem-wheel-cache-y6eoxvak/wheels/0f/b6/9c/fb3743a4dbc9e9a05d04e4808594265ae64ae3e61626a566f1 2025-05-31T09:17:09,897 Successfully built capsul 2025-05-31T09:17:09,955 Removed build tracker: '/tmp/pip-build-tracker-qr5_37l6'