2025-06-02T13:49:10,422 Created temporary directory: /tmp/pip-build-tracker-7krpbj7x
2025-06-02T13:49:10,424 Initialized build tracking at /tmp/pip-build-tracker-7krpbj7x
2025-06-02T13:49:10,425 Created build tracker: /tmp/pip-build-tracker-7krpbj7x
2025-06-02T13:49:10,426 Entered build tracker: /tmp/pip-build-tracker-7krpbj7x
2025-06-02T13:49:10,428 Created temporary directory: /tmp/pip-wheel-1nfte8g4
2025-06-02T13:49:10,440 Created temporary directory: /tmp/pip-ephem-wheel-cache-hv56mibq
2025-06-02T13:49:10,613 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-06-02T13:49:10,619 2 location(s) to search for versions of pybioquanta:
2025-06-02T13:49:10,619 * https://pypi.org/simple/pybioquanta/
2025-06-02T13:49:10,619 * https://www.piwheels.org/simple/pybioquanta/
2025-06-02T13:49:10,623 Fetching project page and analyzing links: https://pypi.org/simple/pybioquanta/
2025-06-02T13:49:10,626 Getting page https://pypi.org/simple/pybioquanta/
2025-06-02T13:49:10,632 Found index url https://pypi.org/simple/
2025-06-02T13:49:10,953 Fetched page https://pypi.org/simple/pybioquanta/ as application/vnd.pypi.simple.v1+json
2025-06-02T13:49:10,955   Skipping link: No binaries permitted for pybioquanta: https://files.pythonhosted.org/packages/e7/9a/86a643942ead528a0f695a1f1506def77b861674cd765c339facbd8dba83/PyBioQuanta-0.1.0-py3-none-any.whl (from https://pypi.org/simple/pybioquanta/) (requires-python:>=3.6)
2025-06-02T13:49:10,958   Found link https://files.pythonhosted.org/packages/4d/0f/38bdad0c9ac27d9b388cf438694ec7d5195aa9869554e9913ce6ece92606/PyBioQuanta-0.1.0.tar.gz (from https://pypi.org/simple/pybioquanta/) (requires-python:>=3.6), version: 0.1.0
2025-06-02T13:49:10,959   Skipping link: No binaries permitted for pybioquanta: https://files.pythonhosted.org/packages/6c/6a/f9f411c22a793922d1f978fe6853fa8e454d85d492db7986e69f7682435f/PyBioQuanta-0.1.1-py3-none-any.whl (from https://pypi.org/simple/pybioquanta/) (requires-python:>=3.6)
2025-06-02T13:49:10,962   Found link https://files.pythonhosted.org/packages/d9/c2/852d38b7752ba2c6fc3ac998b3a79830ab370fd03f661fb97f07b5f0305d/PyBioQuanta-0.1.1.tar.gz (from https://pypi.org/simple/pybioquanta/) (requires-python:>=3.6), version: 0.1.1
2025-06-02T13:49:10,964 Fetching project page and analyzing links: https://www.piwheels.org/simple/pybioquanta/
2025-06-02T13:49:10,969 Getting page https://www.piwheels.org/simple/pybioquanta/
2025-06-02T13:49:10,971 Found index url https://www.piwheels.org/simple/
2025-06-02T13:49:11,280 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/pybioquanta/
2025-06-02T13:49:12,160 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/pybioquanta/
2025-06-02T13:49:13,568 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/pybioquanta/
2025-06-02T13:49:15,903 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/pybioquanta/
2025-06-02T13:49:20,258 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/pybioquanta/
2025-06-02T13:49:20,660 Could not fetch URL https://www.piwheels.org/simple/pybioquanta/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/pybioquanta/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping
2025-06-02T13:49:20,662 Skipping link: not a file: https://www.piwheels.org/simple/pybioquanta/
2025-06-02T13:49:20,664 Skipping link: not a file: https://pypi.org/simple/pybioquanta/
2025-06-02T13:49:20,713 Given no hashes to check 1 links for project 'pybioquanta': discarding no candidates
2025-06-02T13:49:20,732 Collecting pybioquanta==0.1.0
2025-06-02T13:49:20,737   Created temporary directory: /tmp/pip-unpack-7xq9izpq
2025-06-02T13:49:21,250   Downloading PyBioQuanta-0.1.0.tar.gz (3.8 kB)
2025-06-02T13:49:21,345   Added pybioquanta==0.1.0 from https://files.pythonhosted.org/packages/4d/0f/38bdad0c9ac27d9b388cf438694ec7d5195aa9869554e9913ce6ece92606/PyBioQuanta-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-7krpbj7x'
2025-06-02T13:49:21,353   Running setup.py (path:/tmp/pip-wheel-1nfte8g4/pybioquanta_38cedfac01ce480391845c7b2743503b/setup.py) egg_info for package pybioquanta
2025-06-02T13:49:21,355   Created temporary directory: /tmp/pip-pip-egg-info-qzxbxcfv
2025-06-02T13:49:21,356   Preparing metadata (setup.py): started
2025-06-02T13:49:21,370   Running command python setup.py egg_info
2025-06-02T13:49:23,893   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-02T13:49:23,893   !!

2025-06-02T13:49:23,895           ********************************************************************************
2025-06-02T13:49:23,896           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-02T13:49:23,898           License :: OSI Approved :: MIT License

2025-06-02T13:49:23,900           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-02T13:49:23,901           ********************************************************************************

2025-06-02T13:49:23,903   !!
2025-06-02T13:49:23,904     self._finalize_license_expression()
2025-06-02T13:49:24,011   running egg_info
2025-06-02T13:49:24,137   creating /tmp/pip-pip-egg-info-qzxbxcfv/PyBioQuanta.egg-info
2025-06-02T13:49:24,139   writing /tmp/pip-pip-egg-info-qzxbxcfv/PyBioQuanta.egg-info/PKG-INFO
2025-06-02T13:49:24,144   writing dependency_links to /tmp/pip-pip-egg-info-qzxbxcfv/PyBioQuanta.egg-info/dependency_links.txt
2025-06-02T13:49:24,154   writing top-level names to /tmp/pip-pip-egg-info-qzxbxcfv/PyBioQuanta.egg-info/top_level.txt
2025-06-02T13:49:24,157   writing manifest file '/tmp/pip-pip-egg-info-qzxbxcfv/PyBioQuanta.egg-info/SOURCES.txt'
2025-06-02T13:49:24,537   reading manifest file '/tmp/pip-pip-egg-info-qzxbxcfv/PyBioQuanta.egg-info/SOURCES.txt'
2025-06-02T13:49:24,543   adding license file 'LICENSE'
2025-06-02T13:49:24,550   writing manifest file '/tmp/pip-pip-egg-info-qzxbxcfv/PyBioQuanta.egg-info/SOURCES.txt'
2025-06-02T13:49:24,742   Preparing metadata (setup.py): finished with status 'done'
2025-06-02T13:49:24,748   Source in /tmp/pip-wheel-1nfte8g4/pybioquanta_38cedfac01ce480391845c7b2743503b has version 0.1.0, which satisfies requirement pybioquanta==0.1.0 from https://files.pythonhosted.org/packages/4d/0f/38bdad0c9ac27d9b388cf438694ec7d5195aa9869554e9913ce6ece92606/PyBioQuanta-0.1.0.tar.gz
2025-06-02T13:49:24,749   Removed pybioquanta==0.1.0 from https://files.pythonhosted.org/packages/4d/0f/38bdad0c9ac27d9b388cf438694ec7d5195aa9869554e9913ce6ece92606/PyBioQuanta-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-7krpbj7x'
2025-06-02T13:49:24,775 Created temporary directory: /tmp/pip-unpack-mv5lqnza
2025-06-02T13:49:24,777 Created temporary directory: /tmp/pip-unpack-c1iado2b
2025-06-02T13:49:24,778 Building wheels for collected packages: pybioquanta
2025-06-02T13:49:24,785   Created temporary directory: /tmp/pip-wheel-hj7c6plx
2025-06-02T13:49:24,787   DEPRECATION: Building 'pybioquanta' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'pybioquanta'. Discussion can be found at https://github.com/pypa/pip/issues/6334
2025-06-02T13:49:24,789   Building wheel for pybioquanta (setup.py): started
2025-06-02T13:49:24,791   Destination directory: /tmp/pip-wheel-hj7c6plx
2025-06-02T13:49:24,792   Running command python setup.py bdist_wheel
2025-06-02T13:49:27,392   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-02T13:49:27,393   !!

2025-06-02T13:49:27,395           ********************************************************************************
2025-06-02T13:49:27,395           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-02T13:49:27,397           License :: OSI Approved :: MIT License

2025-06-02T13:49:27,399           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-02T13:49:27,400           ********************************************************************************

2025-06-02T13:49:27,402   !!
2025-06-02T13:49:27,403     self._finalize_license_expression()
2025-06-02T13:49:27,406   running bdist_wheel
2025-06-02T13:49:27,773   running build
2025-06-02T13:49:27,775   running build_py
2025-06-02T13:49:27,840   creating build/lib/PyBioQuanta
2025-06-02T13:49:27,845   copying PyBioQuanta/__init__.py -> build/lib/PyBioQuanta
2025-06-02T13:49:27,850   copying PyBioQuanta/random_dna_gen.py -> build/lib/PyBioQuanta
2025-06-02T13:49:27,855   copying PyBioQuanta/motif_finder.py -> build/lib/PyBioQuanta
2025-06-02T13:49:27,860   copying PyBioQuanta/gc_calculator.py -> build/lib/PyBioQuanta
2025-06-02T13:49:27,864   copying PyBioQuanta/simple_translator.py -> build/lib/PyBioQuanta
2025-06-02T13:49:27,869   copying PyBioQuanta/fasta_reader.py -> build/lib/PyBioQuanta
2025-06-02T13:49:27,874   copying PyBioQuanta/seq_reverser.py -> build/lib/PyBioQuanta
2025-06-02T13:49:27,970   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2025-06-02T13:49:27,971   !!

2025-06-02T13:49:27,973           ********************************************************************************
2025-06-02T13:49:27,974           Please avoid running ``setup.py`` directly.
2025-06-02T13:49:27,975           Instead, use pypa/build, pypa/installer or other
2025-06-02T13:49:27,976           standards-based tools.

2025-06-02T13:49:27,978           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-06-02T13:49:27,979           or your builds will no longer be supported.

2025-06-02T13:49:27,981           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2025-06-02T13:49:27,982           ********************************************************************************

2025-06-02T13:49:27,987   !!
2025-06-02T13:49:27,988     self.initialize_options()
2025-06-02T13:49:28,132   installing to build/bdist.linux-armv7l/wheel
2025-06-02T13:49:28,133   running install
2025-06-02T13:49:28,200   running install_lib
2025-06-02T13:49:28,354   creating build/bdist.linux-armv7l/wheel
2025-06-02T13:49:28,358   creating build/bdist.linux-armv7l/wheel/PyBioQuanta
2025-06-02T13:49:28,360   copying build/lib/PyBioQuanta/__init__.py -> build/bdist.linux-armv7l/wheel/./PyBioQuanta
2025-06-02T13:49:28,365   copying build/lib/PyBioQuanta/random_dna_gen.py -> build/bdist.linux-armv7l/wheel/./PyBioQuanta
2025-06-02T13:49:28,368   copying build/lib/PyBioQuanta/motif_finder.py -> build/bdist.linux-armv7l/wheel/./PyBioQuanta
2025-06-02T13:49:28,372   copying build/lib/PyBioQuanta/gc_calculator.py -> build/bdist.linux-armv7l/wheel/./PyBioQuanta
2025-06-02T13:49:28,375   copying build/lib/PyBioQuanta/simple_translator.py -> build/bdist.linux-armv7l/wheel/./PyBioQuanta
2025-06-02T13:49:28,390   copying build/lib/PyBioQuanta/fasta_reader.py -> build/bdist.linux-armv7l/wheel/./PyBioQuanta
2025-06-02T13:49:28,393   copying build/lib/PyBioQuanta/seq_reverser.py -> build/bdist.linux-armv7l/wheel/./PyBioQuanta
2025-06-02T13:49:28,397   running install_egg_info
2025-06-02T13:49:28,556   running egg_info
2025-06-02T13:49:28,705   writing PyBioQuanta.egg-info/PKG-INFO
2025-06-02T13:49:28,710   writing dependency_links to PyBioQuanta.egg-info/dependency_links.txt
2025-06-02T13:49:28,715   writing top-level names to PyBioQuanta.egg-info/top_level.txt
2025-06-02T13:49:28,863   reading manifest file 'PyBioQuanta.egg-info/SOURCES.txt'
2025-06-02T13:49:28,868   adding license file 'LICENSE'
2025-06-02T13:49:28,874   writing manifest file 'PyBioQuanta.egg-info/SOURCES.txt'
2025-06-02T13:49:28,892   Copying PyBioQuanta.egg-info to build/bdist.linux-armv7l/wheel/./PyBioQuanta-0.1.0-py3.11.egg-info
2025-06-02T13:49:28,912   running install_scripts
2025-06-02T13:49:28,950   creating build/bdist.linux-armv7l/wheel/pybioquanta-0.1.0.dist-info/WHEEL
2025-06-02T13:49:28,954   creating '/tmp/pip-wheel-hj7c6plx/pybioquanta-0.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-06-02T13:49:28,958   adding 'PyBioQuanta/__init__.py'
2025-06-02T13:49:28,971   adding 'PyBioQuanta/fasta_reader.py'
2025-06-02T13:49:28,972   adding 'PyBioQuanta/gc_calculator.py'
2025-06-02T13:49:28,974   adding 'PyBioQuanta/motif_finder.py'
2025-06-02T13:49:28,976   adding 'PyBioQuanta/random_dna_gen.py'
2025-06-02T13:49:28,978   adding 'PyBioQuanta/seq_reverser.py'
2025-06-02T13:49:28,980   adding 'PyBioQuanta/simple_translator.py'
2025-06-02T13:49:28,993   adding 'pybioquanta-0.1.0.dist-info/licenses/LICENSE'
2025-06-02T13:49:28,995   adding 'pybioquanta-0.1.0.dist-info/METADATA'
2025-06-02T13:49:28,997   adding 'pybioquanta-0.1.0.dist-info/WHEEL'
2025-06-02T13:49:28,998   adding 'pybioquanta-0.1.0.dist-info/top_level.txt'
2025-06-02T13:49:29,000   adding 'pybioquanta-0.1.0.dist-info/RECORD'
2025-06-02T13:49:29,010   removing build/bdist.linux-armv7l/wheel
2025-06-02T13:49:29,364   Building wheel for pybioquanta (setup.py): finished with status 'done'
2025-06-02T13:49:29,368   Created wheel for pybioquanta: filename=pybioquanta-0.1.0-py3-none-any.whl size=5200 sha256=b7b9ffedf868d5a8b7cc418adae3b1f4195a2d4cbf9eb41483322d9de5854d0b
2025-06-02T13:49:29,370   Stored in directory: /tmp/pip-ephem-wheel-cache-hv56mibq/wheels/86/d5/2b/b37ff3660b46d2fd59715b6c035b2b81d497ca9c9c9ed29c6a
2025-06-02T13:49:29,421 Successfully built pybioquanta
2025-06-02T13:49:29,427 Removed build tracker: '/tmp/pip-build-tracker-7krpbj7x'