2025-06-05T21:00:16,757 Created temporary directory: /tmp/pip-build-tracker-tduyq7na
2025-06-05T21:00:16,758 Initialized build tracking at /tmp/pip-build-tracker-tduyq7na
2025-06-05T21:00:16,758 Created build tracker: /tmp/pip-build-tracker-tduyq7na
2025-06-05T21:00:16,759 Entered build tracker: /tmp/pip-build-tracker-tduyq7na
2025-06-05T21:00:16,760 Created temporary directory: /tmp/pip-wheel-ab3j79tv
2025-06-05T21:00:16,764 Created temporary directory: /tmp/pip-ephem-wheel-cache-v79jhyoq
2025-06-05T21:00:16,813 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-06-05T21:00:16,815 2 location(s) to search for versions of toil:
2025-06-05T21:00:16,815 * https://pypi.org/simple/toil/
2025-06-05T21:00:16,815 * https://www.piwheels.org/simple/toil/
2025-06-05T21:00:16,816 Fetching project page and analyzing links: https://pypi.org/simple/toil/
2025-06-05T21:00:16,817 Getting page https://pypi.org/simple/toil/
2025-06-05T21:00:16,819 Found index url https://pypi.org/simple/
2025-06-05T21:00:17,097 Fetched page https://pypi.org/simple/toil/ as application/vnd.pypi.simple.v1+json
2025-06-05T21:00:17,189   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/6c/81/0254cc67c0e33ef5c9997988990aec5c76f1990595649b773790540c5bd0/toil-3.0.6a1.dev377-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,190   Found link https://files.pythonhosted.org/packages/02/f3/e7aaf455e69bda3bbc193bf1340aa3314f4561b9cefc8e6219a6eba5c7d7/toil-3.0.6a1.dev377.tar.gz (from https://pypi.org/simple/toil/), version: 3.0.6a1.dev377
2025-06-05T21:00:17,191   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/fe/50/526d70bad164c8219e799f3cb3ad2ea421e91d469e7b45887b26da322283/toil-3.0.6-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,192   Found link https://files.pythonhosted.org/packages/db/a0/353db7c2093e644266f906d75d9234362b03f6b487f708730af844fb77e0/toil-3.0.6.tar.gz (from https://pypi.org/simple/toil/), version: 3.0.6
2025-06-05T21:00:17,192   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/13/b5/c1d0ae9af765797b9ba063cb0f0803b396f1cdb686d058ba785f4445f71d/toil-3.0.7.dev2-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,193   Found link https://files.pythonhosted.org/packages/a1/e1/2f9af9de9daef0592327a8b257c7ee4611b06a034ab0e6c58e3460c47f84/toil-3.0.7.dev2.tar.gz (from https://pypi.org/simple/toil/), version: 3.0.7.dev2
2025-06-05T21:00:17,194   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/2f/64/872bdba781264c70b2302a428120252364c86357b9f7b161a5724abeb00c/toil-3.0.7a1.dev1-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,195   Found link https://files.pythonhosted.org/packages/27/ba/b38034d366d38db9c49f47682b3417faeb97d0e4dd67a1e7a64d9c0a5faa/toil-3.0.7a1.dev1.tar.gz (from https://pypi.org/simple/toil/), version: 3.0.7a1.dev1
2025-06-05T21:00:17,195   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9e/14/3d02cab50ffd25ad48cc6aeabde4670ef6b7b4c923c69a451b0d582863ad/toil-3.0.7-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,196   Found link https://files.pythonhosted.org/packages/80/53/3683755f01cff1f2069b2b6a9baaec6f0b4f3b486d7a19ba933279b13975/toil-3.0.7.tar.gz (from https://pypi.org/simple/toil/), version: 3.0.7
2025-06-05T21:00:17,197   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/65/5b/6604147143b518c8e28bab7e1412cc02b3bddcc34b4b745a0cbd37803152/toil-3.0.8a1.dev4-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,198   Found link https://files.pythonhosted.org/packages/5d/90/76a070aac2117f6355209b04a8a0386688adc171a6734fbee05af890604b/toil-3.0.8a1.dev4.tar.gz (from https://pypi.org/simple/toil/), version: 3.0.8a1.dev4
2025-06-05T21:00:17,198   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f0/3a/fc2d27829d0fc7ce8a1155f2437ac06c807ec5400179e303e11161e4b7e7/toil-3.1.0.dev1-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,199   Found link https://files.pythonhosted.org/packages/9d/e3/397e17a16c80e1091061eae705fc32f78f9c30294d9894c9bd54ab3d4d25/toil-3.1.0.dev1.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0.dev1
2025-06-05T21:00:17,200   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/17/4d/35fad81bb8732f4d71af9072b6bbd6d621f3100fd5398521d46db01861b0/toil-3.1.0a1.dev22-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,200   Found link https://files.pythonhosted.org/packages/4b/05/330aa307d03e7e841c77c6c279c7e6ad54e231b4f7066511cda9868473a8/toil-3.1.0a1.dev22.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev22
2025-06-05T21:00:17,201   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/d0/92/4113e16f13779fdbafe7ad0c2277d0f4744c3f4566927b4c4c0a00d21f61/toil-3.1.0a1.dev23-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,201   Found link https://files.pythonhosted.org/packages/5f/cb/7fe62a6c9b1a906355639314041854896159c2d2f1bbf587686b947c9c64/toil-3.1.0a1.dev23.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev23
2025-06-05T21:00:17,202   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/6f/82/f8f4a7a7320a3a96257e2bdee432ce4075e99ad61d2e7ffb19356d76dfc0/toil-3.1.0a1.dev24-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,202   Found link https://files.pythonhosted.org/packages/cc/19/12f3c77f3b9dfd129257519529aa6459c77d7855e804b163e4d1aea9df23/toil-3.1.0a1.dev24.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev24
2025-06-05T21:00:17,203   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f2/97/20076cc673660aa9629247244d33e3e3f805476e0028d42391d4b64143f3/toil-3.1.0a1.dev25-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,204   Found link https://files.pythonhosted.org/packages/fb/03/009320462e7aecef6a390c2310527e91cf970f9cacc21a32e4b8c3a33581/toil-3.1.0a1.dev25.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev25
2025-06-05T21:00:17,204   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e8/14/5d863b11789899320aaa3df7fd4145f47f56264bf1250b3712e993f4d0d8/toil-3.1.0a1.dev29-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,205   Found link https://files.pythonhosted.org/packages/5c/52/98f1476a81f2ae61e54db88955e65f59ff7831a05dfa687c24e8f5b9be55/toil-3.1.0a1.dev29.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev29
2025-06-05T21:00:17,206   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/c7/df/d6325b932a1e04fd036217910ce7a9341cfb9ea680e52c12c81d884c0fed/toil-3.1.0a1.dev30-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,206   Found link https://files.pythonhosted.org/packages/c4/dc/6c9535ef58efe25d3025f63eff6652bfb2302875cfb99fbc1614a5e3950b/toil-3.1.0a1.dev30.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev30
2025-06-05T21:00:17,207   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/2c/0f/80cd3900bc7bb8332ed1ef57fbd2bd5ebd9e343b16ff2945ce06602a59b4/toil-3.1.0a1.dev31-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,207   Found link https://files.pythonhosted.org/packages/f6/f6/4b2d59b81ffa4b5e5e7373f21bcf3b413963420c3817d32e642eaf78c8e5/toil-3.1.0a1.dev31.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev31
2025-06-05T21:00:17,208   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/a3/6e/d301be778549ade0249c54c4001721b3bfca80e6ceeb1f30fe579c339060/toil-3.1.0a1.dev34-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,209   Found link https://files.pythonhosted.org/packages/6f/fe/fedec1849d207e22342e5089f17b8eecccd8614d79983328d5cfebd3697b/toil-3.1.0a1.dev34.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev34
2025-06-05T21:00:17,209   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/50/c5/057a125b9d1eb76dc5d78a835c1cee7b0969c8685d69b180400925ed611d/toil-3.1.0a1.dev35-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,210   Found link https://files.pythonhosted.org/packages/2f/ab/cb323ae126a36bc8873faa5254b4cee51c6b3b5ad106b18259ddd0781dd6/toil-3.1.0a1.dev35.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev35
2025-06-05T21:00:17,211   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/6d/5d/d9ee9ea8c922e48e21248246a276031555651c61e76c768521bc6392d9c9/toil-3.1.0a1.dev37-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,211   Found link https://files.pythonhosted.org/packages/33/25/514fac02234aa9a17335dc130be408d0fa729aa24c02c35d0214e5dda8fc/toil-3.1.0a1.dev37.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev37
2025-06-05T21:00:17,212   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f3/2a/e13c7a234a80ba97e3cb62a9f9c9f0c6752481b118f73fb7724e3f520e08/toil-3.1.0a1.dev38-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,212   Found link https://files.pythonhosted.org/packages/c6/a1/07c75fcd26428da20cb97113a9e2509f6b3ffda3b46b52843ee669324921/toil-3.1.0a1.dev38.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev38
2025-06-05T21:00:17,213   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/33/54/785c6e73d4a11b3265f49933acacba5111836229af08f43a2f71c3466fbd/toil-3.1.0a1.dev39-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,214   Found link https://files.pythonhosted.org/packages/ee/21/766de478135a9aba045de09bfe9cc8c481892149994e0e823775a0f3be5d/toil-3.1.0a1.dev39.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev39
2025-06-05T21:00:17,214   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/7c/a3/359fb6a33ca88b4b606f102b51c08102406faaa1e2c21f80b042eab05165/toil-3.1.0a1.dev40-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,215   Found link https://files.pythonhosted.org/packages/d2/92/2adc1b5726397e8d37d31c811be1e54986a5eb59522bc589697ddbfed1aa/toil-3.1.0a1.dev40.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev40
2025-06-05T21:00:17,216   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/19/a2/3699a1e6d17c8e1bf756a2817427052293c6db839a6b183ead09cb4e7541/toil-3.1.0a1.dev41-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,216   Found link https://files.pythonhosted.org/packages/a3/3e/1c3a1d7809b2830be27f8a78d41c4f2235430c362eecf49a79d4d9652afb/toil-3.1.0a1.dev41.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev41
2025-06-05T21:00:17,217   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/19/4e/8f805daa5b5f1483169fbaad092dff0ab4a4dcc6ba7d9853cdb17a382148/toil-3.1.0a1.dev42-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,218   Found link https://files.pythonhosted.org/packages/77/65/731eadb0e5a3aac28d5b2153337ed1ca4ebf777de4a3fa98579fe9d91dd9/toil-3.1.0a1.dev42.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev42
2025-06-05T21:00:17,218   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/13/23/11d3f607f98c17746a39dc5199988e398047d8d08455c6d3978ba658ec86/toil-3.1.0a1.dev44-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,219   Found link https://files.pythonhosted.org/packages/b5/b3/8c4ca2c1f0369538374b82b01ea0aa21fab47594e005e3008dd7f6898635/toil-3.1.0a1.dev44.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev44
2025-06-05T21:00:17,220   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/0d/39/44a967e1693fd735fe2543fd777757d92b6bcc45e6685a69ed57bb41f970/toil-3.1.0a1.dev45-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,220   Found link https://files.pythonhosted.org/packages/78/9b/64cf8ffc135115fcafd64eafb529089528d0e104a1e374b0d84b46a9dbb5/toil-3.1.0a1.dev45.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev45
2025-06-05T21:00:17,221   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/48/f9/cc7407c217115fa572638076a10388e566e4dfe83b5f6c9214930361de5c/toil-3.1.0a1.dev48-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,222   Found link https://files.pythonhosted.org/packages/62/ce/75d8052d2c31813e0543e70f58417b90f00a1a84277e5be9db08b684167a/toil-3.1.0a1.dev48.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev48
2025-06-05T21:00:17,222   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ce/c1/a3aad742d19ad96a36c7f736a1cd038096f1de2b591604bbe78e111783b6/toil-3.1.0a1.dev50-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,223   Found link https://files.pythonhosted.org/packages/e9/c7/515427e5bfcaa6cea10991ddd54fbca5d93583f24ec6a7ca8a4b89e89fde/toil-3.1.0a1.dev50.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev50
2025-06-05T21:00:17,223   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/05/d7/681512577b4d608a1f8dc5a4db15255b9fa9a774c5649708adec95703a19/toil-3.1.0a1.dev51-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,224   Found link https://files.pythonhosted.org/packages/6e/9b/7fdcd6415019a3d8d781f15aa47ab2399753c1d18b55d04fc68871e64113/toil-3.1.0a1.dev51.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev51
2025-06-05T21:00:17,224   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f1/42/14374a5928574a6cb181c3b0a4aaf726e81582bebbb597a31b640bcfb2b6/toil-3.1.0a1.dev52-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,225   Found link https://files.pythonhosted.org/packages/db/21/4d54841ce3ca8fa173be5bb49b04a250d09e4fed6f04c06ee63d18029260/toil-3.1.0a1.dev52.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0a1.dev52
2025-06-05T21:00:17,226   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/b7/75/0e36287acb8d0c1a2b29e528a9c607dcc742b6a936b3b89589ffe9b1e812/toil-3.1.0b1.dev53-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,226   Found link https://files.pythonhosted.org/packages/d8/2e/4d2ed226e51bfe7704a321b34b80c9ff9fd91741afc0b3f4db5c3a8fccea/toil-3.1.0b1.dev53.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0b1.dev53
2025-06-05T21:00:17,227   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/57/2b/80c66e454b3cc70b199ee8f4edc6758b4284dc429784986a1799bf737809/toil-3.1.0b1.dev54-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,228   Found link https://files.pythonhosted.org/packages/75/28/2d253ff57db77c8b76a5a1ce53789eaa815ec0baaf3f5621e3b501e9b1de/toil-3.1.0b1.dev54.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0b1.dev54
2025-06-05T21:00:17,229   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/23/80/4f3b78bb1480362224f73256e06bfcce5e8666e5d518d33bb9c0137982b2/toil-3.1.0b1.dev55-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,229   Found link https://files.pythonhosted.org/packages/3e/1b/0d25855ef165711b62d572db4ff8fb88a3d65394917ba01f677955fd32e3/toil-3.1.0b1.dev55.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0b1.dev55
2025-06-05T21:00:17,230   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/2b/9a/af90fddbdf8f5c30f36300ae838fde266ca0c8fdc9bb25f710fa669fb507/toil-3.1.0b1.dev56-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,231   Found link https://files.pythonhosted.org/packages/36/ff/c0f2bd3bd78ebb93d5dfd2a93120d7ecdecf4730b6e2cacebbfa6844876f/toil-3.1.0b1.dev56.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0b1.dev56
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2025-06-05T21:00:17,232   Found link https://files.pythonhosted.org/packages/cb/5b/89aec626adfefc09c33e474a6b1d0706c454179a0f9f269a4f7f5d4e8871/toil-3.1.0b1.dev57.tar.gz (from https://pypi.org/simple/toil/), version: 3.1.0b1.dev57
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2025-06-05T21:00:17,300   Found link https://files.pythonhosted.org/packages/4d/85/9eb27ef05d5b16f775e85f4f0320b7c7a9c854e58719b05e80842074710e/toil-3.2.0a2.dev90.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev90
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2025-06-05T21:00:17,326   Found link https://files.pythonhosted.org/packages/e1/56/4666a1d4841e17fe0259bced557f7d5dbe9d7ea3fcf7ff400955c3753259/toil-3.2.0a2.dev114.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev114
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2025-06-05T21:00:17,330   Found link https://files.pythonhosted.org/packages/ce/a7/a8c635ef9acb903099794623fc2d166b8a1d1f1741d0e627909ad05eb464/toil-3.2.0a2.dev117.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev117
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2025-06-05T21:00:17,331   Found link https://files.pythonhosted.org/packages/6a/64/ceb80c9fdfbdbc0d0029aa866fd482d8c88554337999eea5e4d290a26a07/toil-3.2.0a2.dev118.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev118
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2025-06-05T21:00:17,333   Found link https://files.pythonhosted.org/packages/e4/40/5f4181996ca319cf50fbe76cf99f9da53b52bc457abf07fd9369b4c8e529/toil-3.2.0a2.dev119.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev119
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2025-06-05T21:00:17,336   Found link https://files.pythonhosted.org/packages/2a/4b/09933848cfcf81f46cbf7b46abd60a5d83c5f985c74f525ba59dbea16dbd/toil-3.2.0a2.dev122.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev122
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2025-06-05T21:00:17,337   Found link https://files.pythonhosted.org/packages/e7/f6/5a22c1d46645f37826dd2e7e40f77122711b7509136b0845514217db6909/toil-3.2.0a2.dev123.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev123
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2025-06-05T21:00:17,338   Found link https://files.pythonhosted.org/packages/77/cd/727e2a7001cf7131187c401d20aaf5b73e8b8d4a4ae8943fbb828cc7a864/toil-3.2.0a2.dev124.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev124
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2025-06-05T21:00:17,339   Found link https://files.pythonhosted.org/packages/51/11/e61913603348f49a5c4ccbb4660a301f76489f0c67db97882d0de1c2fd03/toil-3.2.0a2.dev125.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev125
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2025-06-05T21:00:17,341   Found link https://files.pythonhosted.org/packages/5d/41/ffdaee92735eabfe6320edacb7f7fd632991c3265272209c98f4d5293f9d/toil-3.2.0a2.dev126.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev126
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2025-06-05T21:00:17,342   Found link https://files.pythonhosted.org/packages/59/4b/91b7f7486c910c6e1ec94f29e0332d781cf2b579132d028506768e386343/toil-3.2.0a2.dev127.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev127
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2025-06-05T21:00:17,344   Found link https://files.pythonhosted.org/packages/75/be/4712105b36dded36b3c998b7365484b72da117777f1d5054a5dff44689ab/toil-3.2.0a2.dev128.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev128
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2025-06-05T21:00:17,349   Found link https://files.pythonhosted.org/packages/26/e7/ff86f2632f9d93504adfebddf6746357bf9c09f14a5b511598e0ad50f05e/toil-3.2.0a2.dev138.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev138
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2025-06-05T21:00:17,367   Found link https://files.pythonhosted.org/packages/8f/ed/c47dc86f2881a4bc1b7915d7ef53ff32fe45500a5b23d54d5ad6710c46b3/toil-3.2.0a2.dev156.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev156
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2025-06-05T21:00:17,383   Found link https://files.pythonhosted.org/packages/bb/09/b54f38730b95efe02884b1026c6fd921d1226a47457670610a1444fb720e/toil-3.2.0a2.dev184.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev184
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2025-06-05T21:00:17,384   Found link https://files.pythonhosted.org/packages/c1/45/cca816ccc60a47ef55f87c9cb6df02cd1461747cede2cf11128367307442/toil-3.2.0a2.dev185.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev185
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2025-06-05T21:00:17,388   Found link https://files.pythonhosted.org/packages/6c/7a/5981254511b6bb8f56e44c03112d604cbc85538443bd7eb77b53a5b5d961/toil-3.2.0a2.dev190.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev190
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2025-06-05T21:00:17,391   Found link https://files.pythonhosted.org/packages/da/87/478881da2f2705d65f720fcbda835cda66544bf43e8d0493cc53983dcfa9/toil-3.2.0a2.dev192.tar.gz (from https://pypi.org/simple/toil/), version: 3.2.0a2.dev192
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2025-06-05T21:00:17,422   Found link https://files.pythonhosted.org/packages/b0/06/0d1969722bcb4a48b9847359239a3822227cd64362d7153c1c38314816b9/toil-3.3.0a1.dev215.tar.gz (from https://pypi.org/simple/toil/), version: 3.3.0a1.dev215
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2025-06-05T21:00:17,460   Found link https://files.pythonhosted.org/packages/1f/21/1ef368212cb44cdb96b8ef1e264969c5e78107afb337e4f2ef70ec08c4f0/toil-3.5.0a1.dev243.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev243
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2025-06-05T21:00:17,463   Found link https://files.pythonhosted.org/packages/05/e0/3c8c8d1dd348e90ffeece5fd54e8f70004ed21c66d873689d61314437370/toil-3.5.0a1.dev245.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev245
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2025-06-05T21:00:17,467   Found link https://files.pythonhosted.org/packages/be/8d/30044e38f93991da57bb9506d1e65e071b95856dea8f4fc83d5b53746c91/toil-3.5.0a1.dev249.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev249
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2025-06-05T21:00:17,468   Found link https://files.pythonhosted.org/packages/f5/62/ade4c500a75665c90ce88aded3eb2f7378cbfa0d8d2e4271612a9f00cf41/toil-3.5.0a1.dev250.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev250
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2025-06-05T21:00:17,470   Found link https://files.pythonhosted.org/packages/00/44/b47a7c13023e62e4a2b05593fb0fc3f71b38659186576e28e82b26a746e2/toil-3.5.0a1.dev251.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev251
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2025-06-05T21:00:17,471   Found link https://files.pythonhosted.org/packages/7f/6b/ed6568a57e3f772cb16c0d495242eb990412aa767b7b527c015989086233/toil-3.5.0a1.dev252.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev252
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2025-06-05T21:00:17,472   Found link https://files.pythonhosted.org/packages/8d/23/43c7436fab5a434b3208e3aaa33ea30ce2d836a963f075ba6b25deefd41a/toil-3.5.0a1.dev253.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev253
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2025-06-05T21:00:17,474   Found link https://files.pythonhosted.org/packages/35/f8/7b0617fc97a4a3a60947b6053c39b603a02c8d272456f6640de72c623f83/toil-3.5.0a1.dev254.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev254
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2025-06-05T21:00:17,475   Found link https://files.pythonhosted.org/packages/15/a1/629e2b5d88aa6e2c1e703c23d870e428b9ee354d54bd84ff9cfa22455be2/toil-3.5.0a1.dev255.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev255
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2025-06-05T21:00:17,476   Found link https://files.pythonhosted.org/packages/2e/30/904da59061168bd879fd8095918299d1b1b9d7664666d5f19215f54454e7/toil-3.5.0a1.dev256.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev256
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2025-06-05T21:00:17,478   Found link https://files.pythonhosted.org/packages/fa/bf/fc28ee617459950f6a10a38984ed6a95e2b22afd8f306b5dd46e46e046ca/toil-3.5.0a1.dev257.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev257
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2025-06-05T21:00:17,479   Found link https://files.pythonhosted.org/packages/90/45/3e5b0ebe3112af17dc6dd0824dd14561ec7377c5d8c9c4bebc3953485278/toil-3.5.0a1.dev259.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev259
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2025-06-05T21:00:17,510   Found link https://files.pythonhosted.org/packages/9d/6a/8f87006874f7e793393e9c54c12175b4bcf6c8ce776440709b51575e413d/toil-3.5.0a1.dev284.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev284
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2025-06-05T21:00:17,511   Found link https://files.pythonhosted.org/packages/47/aa/36621f3456d6e1a574c659c28aad4f4e9b3063edff320a79a209d4dbc05e/toil-3.5.0a1.dev285.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev285
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2025-06-05T21:00:17,514   Found link https://files.pythonhosted.org/packages/13/e3/f056d160987bdd656754d097dd10ec690135781e1d0adb7dfc7c1832d5f2/toil-3.5.0a1.dev289.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev289
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2025-06-05T21:00:17,515   Found link https://files.pythonhosted.org/packages/fe/cd/317ebd9211e6956bc25d882d4af22b9b24bb1ec3926bd621b8c7942cf471/toil-3.5.0a1.dev290.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev290
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2025-06-05T21:00:17,517   Found link https://files.pythonhosted.org/packages/20/fb/1b5c8e2127e9f3dcda90de46a3e4f8fcf851d113332442ccae25f8580716/toil-3.5.0a1.dev291.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev291
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2025-06-05T21:00:17,518   Found link https://files.pythonhosted.org/packages/38/99/144c484fc629f2399d137095c23f201b6569cde4ad0e63b42eeb487c75c3/toil-3.5.0a1.dev292.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev292
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2025-06-05T21:00:17,520   Found link https://files.pythonhosted.org/packages/48/30/80dca179316b378e57643232110f0325b2b218567c9466c3f87a2926413a/toil-3.5.0a1.dev295.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev295
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2025-06-05T21:00:17,560   Found link https://files.pythonhosted.org/packages/42/9d/46393ad1427a34876d795536039280f51f866b79930e6554fa8372151cda/toil-3.5.0a1.dev326.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.0a1.dev326
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2025-06-05T21:00:17,562   Found link https://files.pythonhosted.org/packages/ea/86/71f5e2b9866654ddf27521cb11fcc0c2f0ab5bee618e297e941d5839ec52/toil-3.5.1a1.dev6.tar.gz (from https://pypi.org/simple/toil/), version: 3.5.1a1.dev6
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2025-06-05T21:00:17,601   Found link https://files.pythonhosted.org/packages/62/b9/671a7950b54752563ee567f9e532442dfb3f8880c10db18909eab32526c2/toil-3.7.0a1.dev348.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev348
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2025-06-05T21:00:17,602   Found link https://files.pythonhosted.org/packages/81/66/9cc5bf9e8155d4765ce0730eb4feb283bbc2739f4e15054cefffd549519d/toil-3.7.0a1.dev349.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev349
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2025-06-05T21:00:17,604   Found link https://files.pythonhosted.org/packages/5e/dd/415863804402e0b069e3b2b4d77de6b184c6515d06efeac4b76774c94c90/toil-3.7.0a1.dev350.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev350
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2025-06-05T21:00:17,605   Found link https://files.pythonhosted.org/packages/50/ce/02ef69e0e14fd54241a76c16bd15d70ebbce1d3db900762165711e450f56/toil-3.7.0a1.dev351.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev351
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2025-06-05T21:00:17,606   Found link https://files.pythonhosted.org/packages/80/13/0b19ed62aa4812e281495e2897b3ca7fac96d88e63f340782a9ba34547da/toil-3.7.0a1.dev352.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev352
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2025-06-05T21:00:17,607   Found link https://files.pythonhosted.org/packages/ee/02/04d08257f075c2f8e871063cc89f92a5b60869f7861de06bef6fa95da5ac/toil-3.7.0a1.dev353.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev353
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2025-06-05T21:00:17,609   Found link https://files.pythonhosted.org/packages/7b/b7/fc72bd2a95702f8de281b609efaa66f06c83c72443cabdc10e2a58f07509/toil-3.7.0a1.dev355.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev355
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2025-06-05T21:00:17,610   Found link https://files.pythonhosted.org/packages/d2/68/d1df38ef2b4b2b52920f1752a1e6b84cd901e0fac9de2484cf6904a3318d/toil-3.7.0a1.dev356.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev356
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2025-06-05T21:00:17,612   Found link https://files.pythonhosted.org/packages/e6/41/299c9e9716b4e5628141eb95dc92b0af58c98cfbbc7e74515830718da10a/toil-3.7.0a1.dev357.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev357
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2025-06-05T21:00:17,613   Found link https://files.pythonhosted.org/packages/c3/1e/b76f22aa6b4ce92890f44de8536be0adea47a4365a2854ae6b3e6d860e9c/toil-3.7.0a1.dev358.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev358
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2025-06-05T21:00:17,614   Found link https://files.pythonhosted.org/packages/10/9c/c60ab9c112130bd68f0e07402579286c97fe177c95dae1be2a090e3cd1fb/toil-3.7.0a1.dev359.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev359
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2025-06-05T21:00:17,640   Found link https://files.pythonhosted.org/packages/86/da/59ca874ddb50071822f8047abe86421a04bc36a023f02deaae0f7843d35c/toil-3.7.0a1.dev379.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev379
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2025-06-05T21:00:17,643   Found link https://files.pythonhosted.org/packages/03/ee/d2c6ddf9fc70530b61837f7b002f545fa57f7d51db4a09d6d8e31bd0b9e0/toil-3.7.0a1.dev382.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev382
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2025-06-05T21:00:17,645   Found link https://files.pythonhosted.org/packages/f2/ea/fc939745fa94ff574499635ea5e6eea58a7ee1c0ac20373a8a58fa28e1d6/toil-3.7.0a1.dev383.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev383
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2025-06-05T21:00:17,646   Found link https://files.pythonhosted.org/packages/52/7c/e89218302be8db9fd80d479f4c66ee166cac4bae27d103c7ba36ff46262f/toil-3.7.0a1.dev384.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev384
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2025-06-05T21:00:17,647   Found link https://files.pythonhosted.org/packages/41/93/856cc54930e225c42a85d7b5dd62004ce8d743cf2259a37e996212002d10/toil-3.7.0a1.dev385.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev385
2025-06-05T21:00:17,648   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/c7/15/0ff97aeddf4a88a4e9a8b119d32ea8e13f9d1dc7cd1c5aeda00b30e58829/toil-3.7.0a1.dev386-py2.7.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,649   Found link https://files.pythonhosted.org/packages/46/c6/2ffad30e2e1756777b5b4f2ffdfe2b17d20d141c202d732e5fed40abfb44/toil-3.7.0a1.dev386.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev386
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2025-06-05T21:00:17,650   Found link https://files.pythonhosted.org/packages/b5/e3/3c68275fcff760b57e32a9991d3e785045b8a657959b7955ed00a3f31b96/toil-3.7.0a1.dev387.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev387
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2025-06-05T21:00:17,651   Found link https://files.pythonhosted.org/packages/cc/10/cdba1ff47d577a7c8904ea83066a49c3f3ba4d2a2f0fd1c1b5f3c3728846/toil-3.7.0a1.dev388.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev388
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2025-06-05T21:00:17,652   Found link https://files.pythonhosted.org/packages/fb/9c/f6707c5b46129775ddb0cca680b0c06dd57cede9c7a764b9a703dfc87ad8/toil-3.7.0a1.dev389.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev389
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2025-06-05T21:00:17,654   Found link https://files.pythonhosted.org/packages/d1/1d/566f56999c74afa1e889874b49b9612f7e9bd3b0c41d28ecd02aa326125b/toil-3.7.0a1.dev390.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev390
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2025-06-05T21:00:17,655   Found link https://files.pythonhosted.org/packages/79/59/275805649e26cf44a5a285890a871dfd199abfd6cfa8e07a6cc7a9f4ed2b/toil-3.7.0a1.dev391.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev391
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2025-06-05T21:00:17,656   Found link https://files.pythonhosted.org/packages/5a/de/6ad3b2472ec710501ddecb390f269a9dfb65e2ce0ea42e1150032d350d5f/toil-3.7.0a1.dev392.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0a1.dev392
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2025-06-05T21:00:17,658   Found link https://files.pythonhosted.org/packages/2e/1e/f2373f9bae40622fab82a29e2260662128b6fa9388623939da4310c8f58e/toil-3.7.0.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.0
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2025-06-05T21:00:17,659   Found link https://files.pythonhosted.org/packages/e5/ae/eeba3d1bc939c7440305999d6b9f16d90773ac005b98aee56cf73ff1bd27/toil-3.7.1a1.dev2.tar.gz (from https://pypi.org/simple/toil/), version: 3.7.1a1.dev2
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2025-06-05T21:00:17,662   Found link https://files.pythonhosted.org/packages/42/9b/65dceb8210b4d2787ba31c2c588f2e83ae44b0f7f059256254829d5dcb71/toil-3.8.0a1.dev385.tar.gz (from https://pypi.org/simple/toil/), version: 3.8.0a1.dev385
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2025-06-05T21:00:17,663   Found link https://files.pythonhosted.org/packages/e4/83/fc4e580d55ab45db247036ba281a6712e3103cc7def5328b1003210d31e7/toil-3.8.0a1.dev386.tar.gz (from https://pypi.org/simple/toil/), version: 3.8.0a1.dev386
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2025-06-05T21:00:17,664   Found link https://files.pythonhosted.org/packages/67/40/510f278129f544ac0b37c661aa9da6dc06621b179d66a4a443c330e8b244/toil-3.8.0a1.dev387.tar.gz (from https://pypi.org/simple/toil/), version: 3.8.0a1.dev387
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2025-06-05T21:00:17,665   Found link https://files.pythonhosted.org/packages/b1/0d/e536ada694622278a96f6245ca0703b74481de1229605872b8ae54744a9d/toil-3.8.0a1.dev388.tar.gz (from https://pypi.org/simple/toil/), version: 3.8.0a1.dev388
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2025-06-05T21:00:17,668   Found link https://files.pythonhosted.org/packages/94/e6/ecf6f25082a65c3f1030be4064845bdbd96881ad0256c55cfd5df995eccd/toil-3.8.0a1.dev390.tar.gz (from https://pypi.org/simple/toil/), version: 3.8.0a1.dev390
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2025-06-05T21:00:17,669   Found link https://files.pythonhosted.org/packages/98/2b/d62142c0578c0d5d2dcebf13ae6988ea0ea5445cee3da0a53ebb92be70be/toil-3.8.0a1.dev391.tar.gz (from https://pypi.org/simple/toil/), version: 3.8.0a1.dev391
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2025-06-05T21:00:17,700   Found link https://files.pythonhosted.org/packages/40/1f/07bc564f6cabb62a808ac59de7937f836d63a50d614e408ba48ed4e9626d/toil-3.10.0a1.dev424.tar.gz (from https://pypi.org/simple/toil/), version: 3.10.0a1.dev424
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2025-06-05T21:00:17,733   Found link https://files.pythonhosted.org/packages/bd/72/a664417130f401b25c42689ff1fda58a38d891bcc740aa71ebc498f78ba4/toil-3.17.0.tar.gz (from https://pypi.org/simple/toil/), version: 3.17.0
2025-06-05T21:00:17,733   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/9b/cb/fa338b9a8c6d362f290025f5092924e3dd7353a0c68aae309ef302a8d276/toil-3.18.0-py2-none-any.whl (from https://pypi.org/simple/toil/)
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2025-06-05T21:00:17,737   Found link https://files.pythonhosted.org/packages/0b/54/07ec6ae80703c831e2edc7a400d9e2ce6643abb6e3b08c3274648e700707/toil-3.19.0.tar.gz (from https://pypi.org/simple/toil/), version: 3.19.0
2025-06-05T21:00:17,737   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/c8/74/05554ad921818d0e091b3152bbd10de406f2dab4a13329fe19b2596510bb/toil-3.20.0-py2-none-any.whl (from https://pypi.org/simple/toil/)
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2025-06-05T21:00:17,739   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/41/4f/16ab7b836f25f021a63cb73a520612f0eb87456b0b14b78b63e4f150eb21/toil-3.21.0-py2-none-any.whl (from https://pypi.org/simple/toil/)
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2025-06-05T21:00:17,745   Found link https://files.pythonhosted.org/packages/4a/6b/42fc885c7f482eef302436c4af2361da940f1dd3841a165236d51a377c51/toil-3.22.1a2.tar.gz (from https://pypi.org/simple/toil/), version: 3.22.1a2
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2025-06-05T21:00:17,749   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/78/80/b05c6307b1ae927e85148a10cd672c30ed5d2f562e2d261d5456640adc93/toil-3.22.1a5-py3-none-any.whl (from https://pypi.org/simple/toil/)
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2025-06-05T21:00:17,766   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/79/d0/ee0d85cdcf8f4ae1cf70ed56dec835574fbfbd9198919e2376e2e161e531/toil-5.1.0-py3.6.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,766   Found link https://files.pythonhosted.org/packages/63/13/12736d3ae2c1e91670d47f1ab5ce7570d020bfc3a3ad0908e6d545ed3ef0/toil-5.1.0.tar.gz (from https://pypi.org/simple/toil/), version: 5.1.0
2025-06-05T21:00:17,767   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/38/5e/fb6f98e35699ce4dd169a64817a8e71dbdfb0baaaa6257838c732d8c7417/toil-5.2.0-py3-none-any.whl (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,767   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/2f/aa/46f477adb864c7ae286071ac88363efc5d7225f30d3871ec4aaaa26be2a3/toil-5.2.0-py3.6.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,768   Found link https://files.pythonhosted.org/packages/35/f6/09933bb8f85e4f2478454b67ff3152fca0b597d6041527856e126ed789c7/toil-5.2.0.tar.gz (from https://pypi.org/simple/toil/), version: 5.2.0
2025-06-05T21:00:17,769   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/e6/2c/8126e2300254961f38cdc930faa9e2bbf9b330b9502ce6e3214d42793633/toil-5.3.0-py3-none-any.whl (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,770   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/27/8f/e1c7bf2d0ec213ff18d63f373d9380d191ac165fee11f05dd86847e407d1/toil-5.3.0-py3.6.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,770   Found link https://files.pythonhosted.org/packages/e1/22/dc1f875f43ff18bca3c1b87f27d7705f04d53c9b7408c9833815a360a564/toil-5.3.0.tar.gz (from https://pypi.org/simple/toil/), version: 5.3.0
2025-06-05T21:00:17,771   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/85/1a/e942d99daf3739c2eed6c0dc775a2c3018ed63708b46de9a16bb51f52e9c/toil-5.4.0-py3-none-any.whl (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,771   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/db/d8/fb4d33f38ab58f471aabe151e175e385266a105983fcd8fa68f1621b3b76/toil-5.4.0-py3.6.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,772   Found link https://files.pythonhosted.org/packages/2a/60/72afb112378e2bc1a83a3f5ea690e2e1b7a05574a7a0a75547646d6b5e15/toil-5.4.0.tar.gz (from https://pypi.org/simple/toil/), version: 5.4.0
2025-06-05T21:00:17,772   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/f9/12/c933fc1a39a95d4ab886dc65ea283e9a8aebe7885a46fff973ba5d63df48/toil-5.5.0-py3-none-any.whl (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,773   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/4d/c4/92e63fca1c85b4c2cdd83a9b07228f149bfcba239a6e4ebcf5a409c3c236/toil-5.5.0-py3.6.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,773   Found link https://files.pythonhosted.org/packages/1b/68/0aee8054c884bae53ecf45539be64515db7a8eff0e50a4067d5ffe9874ec/toil-5.5.0.tar.gz (from https://pypi.org/simple/toil/), version: 5.5.0
2025-06-05T21:00:17,774   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/d0/9c/5fa1391847d58ec33f220e2a10fe42fcfd2863a68730e4e33620c03d0a67/toil-5.6.0a1-py3-none-any.whl (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,775   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/be/be/a5df10d35b687585caaece7cdac77a4e5c044fe214828fbefea2c6102b75/toil-5.6.0a1-py3.8.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,775   Found link https://files.pythonhosted.org/packages/0b/dd/7f0259f95c2730bf1a7e2a4af43d0c3feaea731983cdf612669e29d757f0/toil-5.6.0a1.tar.gz (from https://pypi.org/simple/toil/), version: 5.6.0a1
2025-06-05T21:00:17,776   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/80/02/e44397b00870b59b381b86f593fa31b57242dd12884c7831c1f725731a6b/toil-5.6.0-py3-none-any.whl (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,777   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/3a/86/724131b290753fb4dae4d487a36e175e2dcbb479fd7617f9ce50e2bebe28/toil-5.6.0-py3.8.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,777   Found link https://files.pythonhosted.org/packages/2d/c0/d17ad9fe2fea4b7424c82b6a2a1659f7ab3e3b9d86ab99450c773828dce8/toil-5.6.0.tar.gz (from https://pypi.org/simple/toil/), version: 5.6.0
2025-06-05T21:00:17,778   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/fb/7b/46fb6b14c96d7ed50f038fb61b2d34e37ebb7d027e9a19c4685e6101990e/toil-5.7.0a1-py3-none-any.whl (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,778   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/0f/3f/422662a89479f6415eafbe3734312225f446f71feeb2ebe3bef7f0dffcd4/toil-5.7.0a1-py3.8.egg (from https://pypi.org/simple/toil/)
2025-06-05T21:00:17,779   Found link https://files.pythonhosted.org/packages/b6/6b/89cf3d121019dd42111021f14cbbb702260acd44236159f4fb86396e93ad/toil-5.7.0a1.tar.gz (from https://pypi.org/simple/toil/), version: 5.7.0a1
2025-06-05T21:00:17,780   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/8e/fa/0567aad2d8c736d66dc4a0a34477f9c8ad3046b365eef577473b6f988f9b/toil-5.7.1-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,781   Found link https://files.pythonhosted.org/packages/6b/f2/77a917474a2f58d86fa56464a43b734209f778517c5da396af003dbde816/toil-5.7.1.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.7), version: 5.7.1
2025-06-05T21:00:17,781   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/66/2c/a2ab251acf10ca835e859094db222d65275c7fc28b7dbd0068b28d481276/toil-5.8.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,782   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/f9/5e/c19d52e3cd9bb6b36aaeccbe02dd74d7658bd1d7c323891de71f567bf0e9/toil-5.9.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,782   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/4d/43/93ffb42a99d7e01f9716a54aff7dd393a7c57422752f9ebe5dc509d64f93/toil-5.9.0-py3.9.egg (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,783   Found link https://files.pythonhosted.org/packages/86/fd/0259962277c78628dd11c97af6ccea1e1b7d57a8646654bcaba583f3b33e/toil-5.9.0.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.7), version: 5.9.0
2025-06-05T21:00:17,783   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/8f/19/5e3e016d09fea72cf5d5284c413299f80f004e22fa0e664825a01c0059e9/toil-5.9.1-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,784   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/89/45/508f376ca528c17b1c4bcae07b29f798b6d172099687907312e93d1463b0/toil-5.9.1-py3.9.egg (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,785   Found link https://files.pythonhosted.org/packages/dc/cb/ef7e0a3f1ccf1343c5dadee5f5e4ca7a34f0c5727970f0e9444e96a71874/toil-5.9.1.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.7), version: 5.9.1
2025-06-05T21:00:17,785   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/50/38/8f3dfae3272860729c632b718a94353a0de5d30f71b69406c19cf766df7a/toil-5.9.2-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,786   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/a2/a3/b0bf8adc1487fed27eb380c94070a3d7f24b852ec4ae827c10d6d20a2323/toil-5.9.2-py3.9.egg (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,787   Found link https://files.pythonhosted.org/packages/cd/cb/d5088e31a3123265c9ab79307d6d421766fd7610e825725f20b3566d68f0/toil-5.9.2.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.7), version: 5.9.2
2025-06-05T21:00:17,787   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/5a/b0/153b5cfc0a774a3975baa755b1e534b3d2b2779fe52ac044c63b861577a3/toil-5.10.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,788   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/08/d1/61889503f754d56aaa51c007ba5b2533bdeb8fe5e5ab1c49ecdda1c4376d/toil-5.11.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,789   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/1c/71/602dfe0453ecfc630d8173dca0dc67fd961b20b795bf56875f01bf27b3fd/toil-5.11.0-py3.9.egg (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,789   Found link https://files.pythonhosted.org/packages/cf/f1/e66e8f60d0a29229d419ffd2f2332d9f992d4182fbc184da71f283bad795/toil-5.11.0.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.7), version: 5.11.0
2025-06-05T21:00:17,790   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/f8/0d/13d9aa10eb147e5f0c017417ee84b04af3686d65b61187fda5fef185b291/toil-5.12.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.7)
2025-06-05T21:00:17,791   Found link https://files.pythonhosted.org/packages/61/7e/647bc83516555b87f9ca62c65a2ab1f3240e2f721416b15acd9a7fb5c9e9/toil-5.12.0.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.7), version: 5.12.0
2025-06-05T21:00:17,791   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/af/13/b6d7e00ef0cf0ca711618ed97aa2744afa4d16e6a1e12b6a27bcedfb01c2/toil-6.0.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.8)
2025-06-05T21:00:17,792   Found link https://files.pythonhosted.org/packages/2d/45/7ac51d2ae95e216c074e2c225a9e6f48919cc83d94db61a8474b9fcd0633/toil-6.0.0.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.8), version: 6.0.0
2025-06-05T21:00:17,793   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/63/a4/8f817411c253fddc83a2f22995fdbf00310abcdb93f6a3fb78cae0908dde/toil-6.1.0a1-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.8)
2025-06-05T21:00:17,793   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/5f/f9/d5b75490cc8059e7a756d09e35e3454bbeeac63fe953f189fcc70490b46d/toil-6.1.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.8)
2025-06-05T21:00:17,794   Found link https://files.pythonhosted.org/packages/46/85/f06549ce6e1348ca856b93748314dd9b4801f41179543330642563b87aed/toil-6.1.0.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.8), version: 6.1.0
2025-06-05T21:00:17,794   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/bb/2f/cea95a4bd22c869705b05497dccb9fcefd772d087627f350d4b32f0c3c65/toil-7.0.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.8)
2025-06-05T21:00:17,795   Found link https://files.pythonhosted.org/packages/bd/9e/c708d668f8750592abd3341c8035a26b7a5b01a4d359e85c726ae5325744/toil-7.0.0.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.8), version: 7.0.0
2025-06-05T21:00:17,796   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/13/1d/b4cc069687e6cb2af494e36b731add1f577b2569e06f7b95bb11650ed12c/toil-8.0.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.9)
2025-06-05T21:00:17,797   Found link https://files.pythonhosted.org/packages/ca/74/5b426dafa12081eed7b68d5de81cd74bcf075b949090f1feba29dd0b1f89/toil-8.0.0.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.9), version: 8.0.0
2025-06-05T21:00:17,798   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/cd/59/7a9e1b0419095447d0e8924b464d3274098f935f6c21a6844e31dde8e2b8/toil-8.1.0b1-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.9)
2025-06-05T21:00:17,798   Found link https://files.pythonhosted.org/packages/dd/73/e7d494c8c6e15972833020dfb502a9b40f8d9c4e78397e418dec37aa8545/toil-8.1.0b1.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.9), version: 8.1.0b1
2025-06-05T21:00:17,799   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/55/d5/b3f192a5ee136ea934a779f1ec20b467c14db8ac5804706b423e20220980/toil-8.2.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.9)
2025-06-05T21:00:17,800   Found link https://files.pythonhosted.org/packages/31/84/31d9fede80f5f3d953830da35730de05be5f2d1876af4c1957e59af929aa/toil-8.2.0.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.9), version: 8.2.0
2025-06-05T21:00:17,800   Skipping link: No binaries permitted for toil: https://files.pythonhosted.org/packages/a4/c6/778add8de6586eadcf9341f95f9744d405782c3f26ab413b64ce97433dae/toil-9.0.0-py3-none-any.whl (from https://pypi.org/simple/toil/) (requires-python:>=3.9)
2025-06-05T21:00:17,801   Found link https://files.pythonhosted.org/packages/1f/ac/6e9bc64284ef8e9f97929c2b8d139d2e076f05dafac58fcf77d8dfd0def4/toil-9.0.0.tar.gz (from https://pypi.org/simple/toil/) (requires-python:>=3.9), version: 9.0.0
2025-06-05T21:00:17,802 Fetching project page and analyzing links: https://www.piwheels.org/simple/toil/
2025-06-05T21:00:17,803 Getting page https://www.piwheels.org/simple/toil/
2025-06-05T21:00:17,804 Found index url https://www.piwheels.org/simple/
2025-06-05T21:00:17,956 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/toil/
2025-06-05T21:00:18,620 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/toil/
2025-06-05T21:00:19,769 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/toil/
2025-06-05T21:00:21,979 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/toil/
2025-06-05T21:00:26,192 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/toil/
2025-06-05T21:00:26,412 Could not fetch URL https://www.piwheels.org/simple/toil/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/toil/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping
2025-06-05T21:00:26,413 Skipping link: not a file: https://www.piwheels.org/simple/toil/
2025-06-05T21:00:26,414 Skipping link: not a file: https://pypi.org/simple/toil/
2025-06-05T21:00:26,458 Given no hashes to check 1 links for project 'toil': discarding no candidates
2025-06-05T21:00:26,461 Collecting toil==8.2.0
2025-06-05T21:00:26,464   Created temporary directory: /tmp/pip-unpack-r9l74o6r
2025-06-05T21:00:26,687   Downloading toil-8.2.0.tar.gz (7.9 MB)
2025-06-05T21:00:29,893   Added toil==8.2.0 from https://files.pythonhosted.org/packages/31/84/31d9fede80f5f3d953830da35730de05be5f2d1876af4c1957e59af929aa/toil-8.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-tduyq7na'
2025-06-05T21:00:29,895   Created temporary directory: /tmp/pip-build-env-za4nwtmz
2025-06-05T21:00:29,900   Installing build dependencies: started
2025-06-05T21:00:29,902   Running command pip subprocess to install build dependencies
2025-06-05T21:00:31,001   Using pip 25.2 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2025-06-05T21:00:31,002   Non-user install by explicit request
2025-06-05T21:00:31,428   Created build tracker: /tmp/pip-build-tracker-tduyq7na
2025-06-05T21:00:31,429   Entered build tracker: /tmp/pip-build-tracker-tduyq7na
2025-06-05T21:00:31,431   Created temporary directory: /tmp/pip-install-vbc0s38s
2025-06-05T21:00:31,436   Created temporary directory: /tmp/pip-ephem-wheel-cache-z_upv6gz
2025-06-05T21:00:31,482   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-06-05T21:00:31,484   2 location(s) to search for versions of setuptools:
2025-06-05T21:00:31,484   * https://pypi.org/simple/setuptools/
2025-06-05T21:00:31,485   * https://www.piwheels.org/simple/setuptools/
2025-06-05T21:00:31,485   Fetching project page and analyzing links: https://pypi.org/simple/setuptools/
2025-06-05T21:00:31,486   Getting page https://pypi.org/simple/setuptools/
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2025-06-05T21:00:51,324     Found link https://files.pythonhosted.org/packages/b1/09/464d5df9f9ec1ab5054af6d097df6793e542f4aa426ba3062ec64409cab7/packaging-21.2-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.6), version: 21.2
2025-06-05T21:00:51,325     Found link https://files.pythonhosted.org/packages/4d/34/523195b783e799fd401ad4bbc40d787926dd4c61838441df08bf42297792/packaging-21.2.tar.gz (from https://pypi.org/simple/packaging/) (requires-python:>=3.6), version: 21.2
2025-06-05T21:00:51,326     Found link https://files.pythonhosted.org/packages/05/8e/8de486cbd03baba4deef4142bd643a3e7bbe954a784dc1bb17142572d127/packaging-21.3-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.6), version: 21.3
2025-06-05T21:00:51,327     Found link https://files.pythonhosted.org/packages/df/9e/d1a7217f69310c1db8fdf8ab396229f55a699ce34a203691794c5d1cad0c/packaging-21.3.tar.gz (from https://pypi.org/simple/packaging/) (requires-python:>=3.6), version: 21.3
2025-06-05T21:00:51,328     Found link https://files.pythonhosted.org/packages/8f/7b/42582927d281d7cb035609cd3a543ffac89b74f3f4ee8e1c50914bcb57eb/packaging-22.0-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.7), version: 22.0
2025-06-05T21:00:51,328     Found link https://files.pythonhosted.org/packages/6b/f7/c240d7654ddd2d2f3f328d8468d4f1f876865f6b9038b146bec0a6737c65/packaging-22.0.tar.gz (from https://pypi.org/simple/packaging/) (requires-python:>=3.7), version: 22.0
2025-06-05T21:00:51,329     Found link https://files.pythonhosted.org/packages/ed/35/a31aed2993e398f6b09a790a181a7927eb14610ee8bbf02dc14d31677f1c/packaging-23.0-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.7), version: 23.0
2025-06-05T21:00:51,330     Found link https://files.pythonhosted.org/packages/47/d5/aca8ff6f49aa5565df1c826e7bf5e85a6df852ee063600c1efa5b932968c/packaging-23.0.tar.gz (from https://pypi.org/simple/packaging/) (requires-python:>=3.7), version: 23.0
2025-06-05T21:00:51,331     Found link https://files.pythonhosted.org/packages/ab/c3/57f0601a2d4fe15de7a553c00adbc901425661bf048f2a22dfc500caf121/packaging-23.1-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.7), version: 23.1
2025-06-05T21:00:51,332     Found link https://files.pythonhosted.org/packages/b9/6c/7c6658d258d7971c5eb0d9b69fa9265879ec9a9158031206d47800ae2213/packaging-23.1.tar.gz (from https://pypi.org/simple/packaging/) (requires-python:>=3.7), version: 23.1
2025-06-05T21:00:51,333     Found link https://files.pythonhosted.org/packages/ec/1a/610693ac4ee14fcdf2d9bf3c493370e4f2ef7ae2e19217d7a237ff42367d/packaging-23.2-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.7), version: 23.2
2025-06-05T21:00:51,334     Found link https://files.pythonhosted.org/packages/fb/2b/9b9c33ffed44ee921d0967086d653047286054117d584f1b1a7c22ceaf7b/packaging-23.2.tar.gz (from https://pypi.org/simple/packaging/) (requires-python:>=3.7), version: 23.2
2025-06-05T21:00:51,334     Found link https://files.pythonhosted.org/packages/49/df/1fceb2f8900f8639e278b056416d49134fb8d84c5942ffaa01ad34782422/packaging-24.0-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.7), version: 24.0
2025-06-05T21:00:51,335     Found link https://files.pythonhosted.org/packages/ee/b5/b43a27ac7472e1818c4bafd44430e69605baefe1f34440593e0332ec8b4d/packaging-24.0.tar.gz (from https://pypi.org/simple/packaging/) (requires-python:>=3.7), version: 24.0
2025-06-05T21:00:51,336     Found link https://files.pythonhosted.org/packages/08/aa/cc0199a5f0ad350994d660967a8efb233fe0416e4639146c089643407ce6/packaging-24.1-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.8), version: 24.1
2025-06-05T21:00:51,337     Found link https://files.pythonhosted.org/packages/51/65/50db4dda066951078f0a96cf12f4b9ada6e4b811516bf0262c0f4f7064d4/packaging-24.1.tar.gz (from https://pypi.org/simple/packaging/) (requires-python:>=3.8), version: 24.1
2025-06-05T21:00:51,338     Found link https://files.pythonhosted.org/packages/88/ef/eb23f262cca3c0c4eb7ab1933c3b1f03d021f2c48f54763065b6f0e321be/packaging-24.2-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.8), version: 24.2
2025-06-05T21:00:51,339     Found link https://files.pythonhosted.org/packages/d0/63/68dbb6eb2de9cb10ee4c9c14a0148804425e13c4fb20d61cce69f53106da/packaging-24.2.tar.gz (from https://pypi.org/simple/packaging/) (requires-python:>=3.8), version: 24.2
2025-06-05T21:00:51,340     Found link https://files.pythonhosted.org/packages/20/12/38679034af332785aac8774540895e234f4d07f7545804097de4b666afd8/packaging-25.0-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.8), version: 25.0
2025-06-05T21:00:51,340     Found link https://files.pythonhosted.org/packages/a1/d4/1fc4078c65507b51b96ca8f8c3ba19e6a61c8253c72794544580a7b6c24d/packaging-25.0.tar.gz (from https://pypi.org/simple/packaging/) (requires-python:>=3.8), version: 25.0
2025-06-05T21:00:51,341   Fetching project page and analyzing links: https://www.piwheels.org/simple/packaging/
2025-06-05T21:00:51,342   Getting page https://www.piwheels.org/simple/packaging/
2025-06-05T21:00:51,343   Found index url https://www.piwheels.org/simple/
2025-06-05T21:00:51,345   Looking up "https://www.piwheels.org/simple/packaging/" in the cache
2025-06-05T21:00:51,346   Request header has "max_age" as 0, cache bypassed
2025-06-05T21:00:51,346   No cache entry available
2025-06-05T21:00:51,347   Starting new HTTPS connection (13): www.piwheels.org:443
2025-06-05T21:00:51,502   Incremented Retry for (url='/simple/packaging/'): Retry(total=4, connect=None, read=None, redirect=None, status=None)
2025-06-05T21:00:51,503   WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/packaging/
2025-06-05T21:00:51,504   Starting new HTTPS connection (14): www.piwheels.org:443
2025-06-05T21:00:51,657   Incremented Retry for (url='/simple/packaging/'): Retry(total=3, connect=None, read=None, redirect=None, status=None)
2025-06-05T21:00:52,158   WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/packaging/
2025-06-05T21:00:52,159   Starting new HTTPS connection (15): www.piwheels.org:443
2025-06-05T21:00:52,318   Incremented Retry for (url='/simple/packaging/'): Retry(total=2, connect=None, read=None, redirect=None, status=None)
2025-06-05T21:00:53,320   WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/packaging/
2025-06-05T21:00:53,322   Starting new HTTPS connection (16): www.piwheels.org:443
2025-06-05T21:00:53,534   Incremented Retry for (url='/simple/packaging/'): Retry(total=1, connect=None, read=None, redirect=None, status=None)
2025-06-05T21:00:55,536   WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/packaging/
2025-06-05T21:00:55,538   Starting new HTTPS connection (17): www.piwheels.org:443
2025-06-05T21:00:55,754   Incremented Retry for (url='/simple/packaging/'): Retry(total=0, connect=None, read=None, redirect=None, status=None)
2025-06-05T21:00:59,756   WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/packaging/
2025-06-05T21:00:59,757   Starting new HTTPS connection (18): www.piwheels.org:443
2025-06-05T21:00:59,963   Could not fetch URL https://www.piwheels.org/simple/packaging/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/packaging/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping
2025-06-05T21:00:59,963   Skipping link: not a file: https://www.piwheels.org/simple/packaging/
2025-06-05T21:00:59,964   Skipping link: not a file: https://pypi.org/simple/packaging/
2025-06-05T21:00:59,975   Given no hashes to check 44 links for project 'packaging': discarding no candidates
2025-06-05T21:00:59,982   Collecting packaging>=20 (from setuptools_scm>=8)
2025-06-05T21:00:59,983     Obtaining dependency information for packaging>=20 from https://files.pythonhosted.org/packages/20/12/38679034af332785aac8774540895e234f4d07f7545804097de4b666afd8/packaging-25.0-py3-none-any.whl.metadata
2025-06-05T21:00:59,984     Created temporary directory: /tmp/pip-unpack-kdrrlhce
2025-06-05T21:00:59,986     Looking up "https://files.pythonhosted.org/packages/20/12/38679034af332785aac8774540895e234f4d07f7545804097de4b666afd8/packaging-25.0-py3-none-any.whl.metadata" in the cache
2025-06-05T21:00:59,990     Current age based on date: 0
2025-06-05T21:00:59,991     Ignoring unknown cache-control directive: immutable
2025-06-05T21:00:59,991     Freshness lifetime from max-age: 365000000
2025-06-05T21:00:59,992     The response is "fresh", returning cached response
2025-06-05T21:00:59,993     365000000 > 0
2025-06-05T21:00:59,994     Using cached packaging-25.0-py3-none-any.whl.metadata (3.3 kB)
2025-06-05T21:00:59,997     Created temporary directory: /tmp/pip-metadata-qbuu9j06
2025-06-05T21:01:00,008   Created temporary directory: /tmp/pip-unpack-3szzlzvd
2025-06-05T21:01:00,010   Looking up "https://files.pythonhosted.org/packages/a3/dc/17031897dae0efacfea57dfd3a82fdd2a2aeb58e0ff71b77b87e44edc772/setuptools-80.9.0-py3-none-any.whl" in the cache
2025-06-05T21:01:00,013   Current age based on date: 0
2025-06-05T21:01:00,014   Ignoring unknown cache-control directive: immutable
2025-06-05T21:01:00,015   Freshness lifetime from max-age: 365000000
2025-06-05T21:01:00,015   The response is "fresh", returning cached response
2025-06-05T21:01:00,016   365000000 > 0
2025-06-05T21:01:00,018   Using cached setuptools-80.9.0-py3-none-any.whl (1.2 MB)
2025-06-05T21:01:00,044   Downloading link https://files.pythonhosted.org/packages/a3/dc/17031897dae0efacfea57dfd3a82fdd2a2aeb58e0ff71b77b87e44edc772/setuptools-80.9.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.9) to /tmp/pip-unpack-3szzlzvd/setuptools-80.9.0-py3-none-any.whl
2025-06-05T21:01:00,047   Looking up "https://files.pythonhosted.org/packages/ab/ac/8f96ba9b4cfe3e4ea201f23f4f97165862395e9331a424ed325ae37024a8/setuptools_scm-8.3.1-py3-none-any.whl" in the cache
2025-06-05T21:01:00,051   Current age based on date: 0
2025-06-05T21:01:00,052   Ignoring unknown cache-control directive: immutable
2025-06-05T21:01:00,053   Freshness lifetime from max-age: 365000000
2025-06-05T21:01:00,054   The response is "fresh", returning cached response
2025-06-05T21:01:00,055   365000000 > 0
2025-06-05T21:01:00,057   Using cached setuptools_scm-8.3.1-py3-none-any.whl (43 kB)
2025-06-05T21:01:00,060   Downloading link https://files.pythonhosted.org/packages/ab/ac/8f96ba9b4cfe3e4ea201f23f4f97165862395e9331a424ed325ae37024a8/setuptools_scm-8.3.1-py3-none-any.whl (from https://pypi.org/simple/setuptools-scm/) (requires-python:>=3.8) to /tmp/pip-unpack-3szzlzvd/setuptools_scm-8.3.1-py3-none-any.whl
2025-06-05T21:01:00,063   Looking up "https://files.pythonhosted.org/packages/20/12/38679034af332785aac8774540895e234f4d07f7545804097de4b666afd8/packaging-25.0-py3-none-any.whl" in the cache
2025-06-05T21:01:00,067   Current age based on date: 0
2025-06-05T21:01:00,068   Ignoring unknown cache-control directive: immutable
2025-06-05T21:01:00,069   Freshness lifetime from max-age: 365000000
2025-06-05T21:01:00,070   The response is "fresh", returning cached response
2025-06-05T21:01:00,071   365000000 > 0
2025-06-05T21:01:00,073   Using cached packaging-25.0-py3-none-any.whl (66 kB)
2025-06-05T21:01:00,077   Downloading link https://files.pythonhosted.org/packages/20/12/38679034af332785aac8774540895e234f4d07f7545804097de4b666afd8/packaging-25.0-py3-none-any.whl (from https://pypi.org/simple/packaging/) (requires-python:>=3.8) to /tmp/pip-unpack-3szzlzvd/packaging-25.0-py3-none-any.whl
2025-06-05T21:01:00,701   Installing collected packages: setuptools, packaging, setuptools_scm

2025-06-05T21:01:01,622   Successfully installed packaging-25.0 setuptools-80.9.0 setuptools_scm-8.3.1
2025-06-05T21:01:01,623   Removed build tracker: '/tmp/pip-build-tracker-tduyq7na'
2025-06-05T21:01:01,842   Installing build dependencies: finished with status 'done'
2025-06-05T21:01:01,845   Getting requirements to build wheel: started
2025-06-05T21:01:01,846   Running command Getting requirements to build wheel
2025-06-05T21:01:03,241   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-05T21:01:03,241   !!

2025-06-05T21:01:03,242           ********************************************************************************
2025-06-05T21:01:03,243           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-05T21:01:03,244           License :: OSI Approved :: Apache Software License

2025-06-05T21:01:03,245           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-05T21:01:03,246           ********************************************************************************

2025-06-05T21:01:03,247   !!
2025-06-05T21:01:03,248     self._finalize_license_expression()
2025-06-05T21:01:03,339   running egg_info
2025-06-05T21:01:03,348   writing src/toil.egg-info/PKG-INFO
2025-06-05T21:01:03,389   writing dependency_links to src/toil.egg-info/dependency_links.txt
2025-06-05T21:01:03,391   writing entry points to src/toil.egg-info/entry_points.txt
2025-06-05T21:01:03,420   writing requirements to src/toil.egg-info/requires.txt
2025-06-05T21:01:03,421   writing top-level names to src/toil.egg-info/top_level.txt
2025-06-05T21:01:03,554   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2025-06-05T21:01:03,561   reading manifest file 'src/toil.egg-info/SOURCES.txt'
2025-06-05T21:01:03,637   reading manifest template 'MANIFEST.in'
2025-06-05T21:01:03,862   adding license file 'LICENSE'
2025-06-05T21:01:03,885   writing manifest file 'src/toil.egg-info/SOURCES.txt'
2025-06-05T21:01:03,983   Getting requirements to build wheel: finished with status 'done'
2025-06-05T21:01:03,987   Created temporary directory: /tmp/pip-modern-metadata-7ax098eb
2025-06-05T21:01:03,989   Preparing metadata (pyproject.toml): started
2025-06-05T21:01:03,990   Running command Preparing metadata (pyproject.toml)
2025-06-05T21:01:04,645   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-05T21:01:04,645   !!

2025-06-05T21:01:04,646           ********************************************************************************
2025-06-05T21:01:04,647           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-05T21:01:04,648           License :: OSI Approved :: Apache Software License

2025-06-05T21:01:04,649           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-05T21:01:04,649           ********************************************************************************

2025-06-05T21:01:04,650   !!
2025-06-05T21:01:04,651     self._finalize_license_expression()
2025-06-05T21:01:04,684   running dist_info
2025-06-05T21:01:04,699   creating /tmp/pip-modern-metadata-7ax098eb/toil.egg-info
2025-06-05T21:01:04,700   writing /tmp/pip-modern-metadata-7ax098eb/toil.egg-info/PKG-INFO
2025-06-05T21:01:04,744   writing dependency_links to /tmp/pip-modern-metadata-7ax098eb/toil.egg-info/dependency_links.txt
2025-06-05T21:01:04,746   writing entry points to /tmp/pip-modern-metadata-7ax098eb/toil.egg-info/entry_points.txt
2025-06-05T21:01:04,775   writing requirements to /tmp/pip-modern-metadata-7ax098eb/toil.egg-info/requires.txt
2025-06-05T21:01:04,776   writing top-level names to /tmp/pip-modern-metadata-7ax098eb/toil.egg-info/top_level.txt
2025-06-05T21:01:04,778   writing manifest file '/tmp/pip-modern-metadata-7ax098eb/toil.egg-info/SOURCES.txt'
2025-06-05T21:01:04,875   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2025-06-05T21:01:04,878   reading manifest file '/tmp/pip-modern-metadata-7ax098eb/toil.egg-info/SOURCES.txt'
2025-06-05T21:01:04,880   reading manifest template 'MANIFEST.in'
2025-06-05T21:01:05,087   adding license file 'LICENSE'
2025-06-05T21:01:05,099   writing manifest file '/tmp/pip-modern-metadata-7ax098eb/toil.egg-info/SOURCES.txt'
2025-06-05T21:01:05,100   creating '/tmp/pip-modern-metadata-7ax098eb/toil-8.2.0.dist-info'
2025-06-05T21:01:05,267   Preparing metadata (pyproject.toml): finished with status 'done'
2025-06-05T21:01:05,273   Source in /tmp/pip-wheel-ab3j79tv/toil_a1944b11f463412fa4b356b2bae48ca1 has version 8.2.0, which satisfies requirement toil==8.2.0 from https://files.pythonhosted.org/packages/31/84/31d9fede80f5f3d953830da35730de05be5f2d1876af4c1957e59af929aa/toil-8.2.0.tar.gz
2025-06-05T21:01:05,274   Removed toil==8.2.0 from https://files.pythonhosted.org/packages/31/84/31d9fede80f5f3d953830da35730de05be5f2d1876af4c1957e59af929aa/toil-8.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-tduyq7na'
2025-06-05T21:01:05,372 Created temporary directory: /tmp/pip-unpack-m_ij9azg
2025-06-05T21:01:05,373 Created temporary directory: /tmp/pip-unpack-qd8tu1j4
2025-06-05T21:01:05,374 Building wheels for collected packages: toil
2025-06-05T21:01:05,378   Created temporary directory: /tmp/pip-wheel-xqwcl8y_
2025-06-05T21:01:05,379   Destination directory: /tmp/pip-wheel-xqwcl8y_
2025-06-05T21:01:05,381   Building wheel for toil (pyproject.toml): started
2025-06-05T21:01:05,382   Running command Building wheel for toil (pyproject.toml)
2025-06-05T21:01:06,018   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-05T21:01:06,019   !!

2025-06-05T21:01:06,020           ********************************************************************************
2025-06-05T21:01:06,021           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-05T21:01:06,022           License :: OSI Approved :: Apache Software License

2025-06-05T21:01:06,023           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-05T21:01:06,023           ********************************************************************************

2025-06-05T21:01:06,024   !!
2025-06-05T21:01:06,025     self._finalize_license_expression()
2025-06-05T21:01:06,057   running bdist_wheel
2025-06-05T21:01:06,124   running build
2025-06-05T21:01:06,125   running build_py
2025-06-05T21:01:06,136   creating build/lib/toil
2025-06-05T21:01:06,138   copying src/toil/job.py -> build/lib/toil
2025-06-05T21:01:06,143   copying src/toil/version.py -> build/lib/toil
2025-06-05T21:01:06,145   copying src/toil/__init__.py -> build/lib/toil
2025-06-05T21:01:06,147   copying src/toil/toilState.py -> build/lib/toil
2025-06-05T21:01:06,150   copying src/toil/leader.py -> build/lib/toil
2025-06-05T21:01:06,153   copying src/toil/resource.py -> build/lib/toil
2025-06-05T21:01:06,156   copying src/toil/serviceManager.py -> build/lib/toil
2025-06-05T21:01:06,159   copying src/toil/common.py -> build/lib/toil
2025-06-05T21:01:06,162   copying src/toil/exceptions.py -> build/lib/toil
2025-06-05T21:01:06,164   copying src/toil/deferred.py -> build/lib/toil
2025-06-05T21:01:06,167   copying src/toil/realtimeLogger.py -> build/lib/toil
2025-06-05T21:01:06,169   copying src/toil/bus.py -> build/lib/toil
2025-06-05T21:01:06,172   copying src/toil/worker.py -> build/lib/toil
2025-06-05T21:01:06,175   copying src/toil/statsAndLogging.py -> build/lib/toil
2025-06-05T21:01:06,178   creating build/lib/toil/server
2025-06-05T21:01:06,179   copying src/toil/server/wsgi_app.py -> build/lib/toil/server
2025-06-05T21:01:06,181   copying src/toil/server/app.py -> build/lib/toil/server
2025-06-05T21:01:06,184   copying src/toil/server/__init__.py -> build/lib/toil/server
2025-06-05T21:01:06,185   copying src/toil/server/celery_app.py -> build/lib/toil/server
2025-06-05T21:01:06,187   copying src/toil/server/utils.py -> build/lib/toil/server
2025-06-05T21:01:06,190   creating build/lib/toil/options
2025-06-05T21:01:06,191   copying src/toil/options/runner.py -> build/lib/toil/options
2025-06-05T21:01:06,194   copying src/toil/options/__init__.py -> build/lib/toil/options
2025-06-05T21:01:06,195   copying src/toil/options/cwl.py -> build/lib/toil/options
2025-06-05T21:01:06,198   copying src/toil/options/common.py -> build/lib/toil/options
2025-06-05T21:01:06,202   copying src/toil/options/wdl.py -> build/lib/toil/options
2025-06-05T21:01:06,204   creating build/lib/toil/wdl
2025-06-05T21:01:06,206   copying src/toil/wdl/__init__.py -> build/lib/toil/wdl
2025-06-05T21:01:06,207   copying src/toil/wdl/wdltoil.py -> build/lib/toil/wdl
2025-06-05T21:01:06,215   copying src/toil/wdl/utils.py -> build/lib/toil/wdl
2025-06-05T21:01:06,217   creating build/lib/toil/provisioners
2025-06-05T21:01:06,218   copying src/toil/provisioners/gceProvisioner.py -> build/lib/toil/provisioners
2025-06-05T21:01:06,221   copying src/toil/provisioners/clusterScaler.py -> build/lib/toil/provisioners
2025-06-05T21:01:06,225   copying src/toil/provisioners/__init__.py -> build/lib/toil/provisioners
2025-06-05T21:01:06,227   copying src/toil/provisioners/node.py -> build/lib/toil/provisioners
2025-06-05T21:01:06,230   copying src/toil/provisioners/abstractProvisioner.py -> build/lib/toil/provisioners
2025-06-05T21:01:06,235   creating build/lib/toil/utils
2025-06-05T21:01:06,236   copying src/toil/utils/toilLaunchCluster.py -> build/lib/toil/utils
2025-06-05T21:01:06,239   copying src/toil/utils/toilClean.py -> build/lib/toil/utils
2025-06-05T21:01:06,241   copying src/toil/utils/__init__.py -> build/lib/toil/utils
2025-06-05T21:01:06,242   copying src/toil/utils/toilKill.py -> build/lib/toil/utils
2025-06-05T21:01:06,245   copying src/toil/utils/toilStatus.py -> build/lib/toil/utils
2025-06-05T21:01:06,247   copying src/toil/utils/toilDebugFile.py -> build/lib/toil/utils
2025-06-05T21:01:06,250   copying src/toil/utils/toilSshCluster.py -> build/lib/toil/utils
2025-06-05T21:01:06,252   copying src/toil/utils/toilMain.py -> build/lib/toil/utils
2025-06-05T21:01:06,254   copying src/toil/utils/toilUpdateEC2Instances.py -> build/lib/toil/utils
2025-06-05T21:01:06,256   copying src/toil/utils/toilDebugJob.py -> build/lib/toil/utils
2025-06-05T21:01:06,258   copying src/toil/utils/toilConfig.py -> build/lib/toil/utils
2025-06-05T21:01:06,260   copying src/toil/utils/toilStats.py -> build/lib/toil/utils
2025-06-05T21:01:06,263   copying src/toil/utils/toilDestroyCluster.py -> build/lib/toil/utils
2025-06-05T21:01:06,265   copying src/toil/utils/toilServer.py -> build/lib/toil/utils
2025-06-05T21:01:06,267   copying src/toil/utils/toilRsyncCluster.py -> build/lib/toil/utils
2025-06-05T21:01:06,270   creating build/lib/toil/jobStores
2025-06-05T21:01:06,271   copying src/toil/jobStores/fileJobStore.py -> build/lib/toil/jobStores
2025-06-05T21:01:06,275   copying src/toil/jobStores/abstractJobStore.py -> build/lib/toil/jobStores
2025-06-05T21:01:06,280   copying src/toil/jobStores/__init__.py -> build/lib/toil/jobStores
2025-06-05T21:01:06,282   copying src/toil/jobStores/conftest.py -> build/lib/toil/jobStores
2025-06-05T21:01:06,284   copying src/toil/jobStores/utils.py -> build/lib/toil/jobStores
2025-06-05T21:01:06,287   copying src/toil/jobStores/googleJobStore.py -> build/lib/toil/jobStores
2025-06-05T21:01:06,291   creating build/lib/toil/lib
2025-06-05T21:01:06,292   copying src/toil/lib/web.py -> build/lib/toil/lib
2025-06-05T21:01:06,294   copying src/toil/lib/iterables.py -> build/lib/toil/lib
2025-06-05T21:01:06,297   copying src/toil/lib/resources.py -> build/lib/toil/lib
2025-06-05T21:01:06,299   copying src/toil/lib/history_submission.py -> build/lib/toil/lib
2025-06-05T21:01:06,302   copying src/toil/lib/ec2.py -> build/lib/toil/lib
2025-06-05T21:01:06,305   copying src/toil/lib/throttle.py -> build/lib/toil/lib
2025-06-05T21:01:06,307   copying src/toil/lib/memoize.py -> build/lib/toil/lib
2025-06-05T21:01:06,310   copying src/toil/lib/__init__.py -> build/lib/toil/lib
2025-06-05T21:01:06,311   copying src/toil/lib/compatibility.py -> build/lib/toil/lib
2025-06-05T21:01:06,313   copying src/toil/lib/dockstore.py -> build/lib/toil/lib
2025-06-05T21:01:06,316   copying src/toil/lib/conversions.py -> build/lib/toil/lib
2025-06-05T21:01:06,319   copying src/toil/lib/objects.py -> build/lib/toil/lib
2025-06-05T21:01:06,321   copying src/toil/lib/io.py -> build/lib/toil/lib
2025-06-05T21:01:06,324   copying src/toil/lib/bioio.py -> build/lib/toil/lib
2025-06-05T21:01:06,326   copying src/toil/lib/ftp_utils.py -> build/lib/toil/lib
2025-06-05T21:01:06,329   copying src/toil/lib/exceptions.py -> build/lib/toil/lib
2025-06-05T21:01:06,331   copying src/toil/lib/expando.py -> build/lib/toil/lib
2025-06-05T21:01:06,333   copying src/toil/lib/generatedEC2Lists.py -> build/lib/toil/lib
2025-06-05T21:01:06,344   copying src/toil/lib/threading.py -> build/lib/toil/lib
2025-06-05T21:01:06,347   copying src/toil/lib/misc.py -> build/lib/toil/lib
2025-06-05T21:01:06,350   copying src/toil/lib/docker.py -> build/lib/toil/lib
2025-06-05T21:01:06,353   copying src/toil/lib/history.py -> build/lib/toil/lib
2025-06-05T21:01:06,357   copying src/toil/lib/humanize.py -> build/lib/toil/lib
2025-06-05T21:01:06,359   copying src/toil/lib/ec2nodes.py -> build/lib/toil/lib
2025-06-05T21:01:06,362   copying src/toil/lib/accelerators.py -> build/lib/toil/lib
2025-06-05T21:01:06,364   copying src/toil/lib/retry.py -> build/lib/toil/lib
2025-06-05T21:01:06,367   copying src/toil/lib/trs.py -> build/lib/toil/lib
2025-06-05T21:01:06,370   creating build/lib/toil/cwl
2025-06-05T21:01:06,371   copying src/toil/cwl/__init__.py -> build/lib/toil/cwl
2025-06-05T21:01:06,374   copying src/toil/cwl/conftest.py -> build/lib/toil/cwl
2025-06-05T21:01:06,376   copying src/toil/cwl/utils.py -> build/lib/toil/cwl
2025-06-05T21:01:06,378   copying src/toil/cwl/cwltoil.py -> build/lib/toil/cwl
2025-06-05T21:01:06,384   creating build/lib/toil/test
2025-06-05T21:01:06,385   copying src/toil/test/__init__.py -> build/lib/toil/test
2025-06-05T21:01:06,389   copying src/toil/test/conftest.py -> build/lib/toil/test
2025-06-05T21:01:06,391   creating build/lib/toil/fileStores
2025-06-05T21:01:06,392   copying src/toil/fileStores/abstractFileStore.py -> build/lib/toil/fileStores
2025-06-05T21:01:06,395   copying src/toil/fileStores/__init__.py -> build/lib/toil/fileStores
2025-06-05T21:01:06,397   copying src/toil/fileStores/cachingFileStore.py -> build/lib/toil/fileStores
2025-06-05T21:01:06,401   copying src/toil/fileStores/nonCachingFileStore.py -> build/lib/toil/fileStores
2025-06-05T21:01:06,404   creating build/lib/toil/batchSystems
2025-06-05T21:01:06,405   copying src/toil/batchSystems/local_support.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,407   copying src/toil/batchSystems/gridengine.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,410   copying src/toil/batchSystems/abstractBatchSystem.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,412   copying src/toil/batchSystems/lsfHelper.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,415   copying src/toil/batchSystems/abstractGridEngineBatchSystem.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,417   copying src/toil/batchSystems/options.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,420   copying src/toil/batchSystems/__init__.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,422   copying src/toil/batchSystems/contained_executor.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,424   copying src/toil/batchSystems/htcondor.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,427   copying src/toil/batchSystems/awsBatch.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,429   copying src/toil/batchSystems/singleMachine.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,432   copying src/toil/batchSystems/torque.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,435   copying src/toil/batchSystems/cleanup_support.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,437   copying src/toil/batchSystems/kubernetes.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,441   copying src/toil/batchSystems/registry.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,443   copying src/toil/batchSystems/lsf.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,446   copying src/toil/batchSystems/slurm.py -> build/lib/toil/batchSystems
2025-06-05T21:01:06,450   creating build/lib/toil/server/cli
2025-06-05T21:01:06,451   copying src/toil/server/cli/__init__.py -> build/lib/toil/server/cli
2025-06-05T21:01:06,453   copying src/toil/server/cli/wes_cwl_runner.py -> build/lib/toil/server/cli
2025-06-05T21:01:06,456   creating build/lib/toil/server/api_spec
2025-06-05T21:01:06,457   copying src/toil/server/api_spec/__init__.py -> build/lib/toil/server/api_spec
2025-06-05T21:01:06,460   creating build/lib/toil/server/wes
2025-06-05T21:01:06,461   copying src/toil/server/wes/abstract_backend.py -> build/lib/toil/server/wes
2025-06-05T21:01:06,463   copying src/toil/server/wes/__init__.py -> build/lib/toil/server/wes
2025-06-05T21:01:06,465   copying src/toil/server/wes/tasks.py -> build/lib/toil/server/wes
2025-06-05T21:01:06,468   copying src/toil/server/wes/toil_backend.py -> build/lib/toil/server/wes
2025-06-05T21:01:06,471   copying src/toil/server/wes/amazon_wes_utils.py -> build/lib/toil/server/wes
2025-06-05T21:01:06,474   creating build/lib/toil/provisioners/aws
2025-06-05T21:01:06,475   copying src/toil/provisioners/aws/__init__.py -> build/lib/toil/provisioners/aws
2025-06-05T21:01:06,478   copying src/toil/provisioners/aws/awsProvisioner.py -> build/lib/toil/provisioners/aws
2025-06-05T21:01:06,482   creating build/lib/toil/jobStores/aws
2025-06-05T21:01:06,483   copying src/toil/jobStores/aws/__init__.py -> build/lib/toil/jobStores/aws
2025-06-05T21:01:06,485   copying src/toil/jobStores/aws/jobStore.py -> build/lib/toil/jobStores/aws
2025-06-05T21:01:06,489   copying src/toil/jobStores/aws/utils.py -> build/lib/toil/jobStores/aws
2025-06-05T21:01:06,492   creating build/lib/toil/lib/aws
2025-06-05T21:01:06,493   copying src/toil/lib/aws/ami.py -> build/lib/toil/lib/aws
2025-06-05T21:01:06,496   copying src/toil/lib/aws/s3.py -> build/lib/toil/lib/aws
2025-06-05T21:01:06,498   copying src/toil/lib/aws/__init__.py -> build/lib/toil/lib/aws
2025-06-05T21:01:06,500   copying src/toil/lib/aws/session.py -> build/lib/toil/lib/aws
2025-06-05T21:01:06,503   copying src/toil/lib/aws/utils.py -> build/lib/toil/lib/aws
2025-06-05T21:01:06,506   copying src/toil/lib/aws/iam.py -> build/lib/toil/lib/aws
2025-06-05T21:01:06,509   creating build/lib/toil/lib/encryption
2025-06-05T21:01:06,510   copying src/toil/lib/encryption/_dummy.py -> build/lib/toil/lib/encryption
2025-06-05T21:01:06,512   copying src/toil/lib/encryption/__init__.py -> build/lib/toil/lib/encryption
2025-06-05T21:01:06,514   copying src/toil/lib/encryption/conftest.py -> build/lib/toil/lib/encryption
2025-06-05T21:01:06,516   copying src/toil/lib/encryption/_nacl.py -> build/lib/toil/lib/encryption
2025-06-05T21:01:06,518   creating build/lib/toil/test/server
2025-06-05T21:01:06,519   copying src/toil/test/server/__init__.py -> build/lib/toil/test/server
2025-06-05T21:01:06,521   copying src/toil/test/server/serverTest.py -> build/lib/toil/test/server
2025-06-05T21:01:06,525   creating build/lib/toil/test/cactus
2025-06-05T21:01:06,526   copying src/toil/test/cactus/test_cactus_integration.py -> build/lib/toil/test/cactus
2025-06-05T21:01:06,528   copying src/toil/test/cactus/__init__.py -> build/lib/toil/test/cactus
2025-06-05T21:01:06,530   creating build/lib/toil/test/options
2025-06-05T21:01:06,531   copying src/toil/test/options/options.py -> build/lib/toil/test/options
2025-06-05T21:01:06,533   copying src/toil/test/options/__init__.py -> build/lib/toil/test/options
2025-06-05T21:01:06,535   creating build/lib/toil/test/wdl
2025-06-05T21:01:06,536   copying src/toil/test/wdl/__init__.py -> build/lib/toil/test/wdl
2025-06-05T21:01:06,538   copying src/toil/test/wdl/wdltoil_test.py -> build/lib/toil/test/wdl
2025-06-05T21:01:06,542   copying src/toil/test/wdl/wdltoil_test_kubernetes.py -> build/lib/toil/test/wdl
2025-06-05T21:01:06,544   creating build/lib/toil/test/provisioners
2025-06-05T21:01:06,545   copying src/toil/test/provisioners/clusterScalerTest.py -> build/lib/toil/test/provisioners
2025-06-05T21:01:06,548   copying src/toil/test/provisioners/gceProvisionerTest.py -> build/lib/toil/test/provisioners
2025-06-05T21:01:06,551   copying src/toil/test/provisioners/provisionerTest.py -> build/lib/toil/test/provisioners
2025-06-05T21:01:06,553   copying src/toil/test/provisioners/__init__.py -> build/lib/toil/test/provisioners
2025-06-05T21:01:06,555   copying src/toil/test/provisioners/restartScript.py -> build/lib/toil/test/provisioners
2025-06-05T21:01:06,557   copying src/toil/test/provisioners/clusterTest.py -> build/lib/toil/test/provisioners
2025-06-05T21:01:06,560   creating build/lib/toil/test/mesos
2025-06-05T21:01:06,561   copying src/toil/test/mesos/helloWorld.py -> build/lib/toil/test/mesos
2025-06-05T21:01:06,563   copying src/toil/test/mesos/__init__.py -> build/lib/toil/test/mesos
2025-06-05T21:01:06,565   copying src/toil/test/mesos/stress.py -> build/lib/toil/test/mesos
2025-06-05T21:01:06,567   copying src/toil/test/mesos/MesosDataStructuresTest.py -> build/lib/toil/test/mesos
2025-06-05T21:01:06,569   creating build/lib/toil/test/sort
2025-06-05T21:01:06,570   copying src/toil/test/sort/__init__.py -> build/lib/toil/test/sort
2025-06-05T21:01:06,572   copying src/toil/test/sort/sort.py -> build/lib/toil/test/sort
2025-06-05T21:01:06,575   copying src/toil/test/sort/sortTest.py -> build/lib/toil/test/sort
2025-06-05T21:01:06,577   copying src/toil/test/sort/restart_sort.py -> build/lib/toil/test/sort
2025-06-05T21:01:06,580   creating build/lib/toil/test/docs
2025-06-05T21:01:06,581   copying src/toil/test/docs/__init__.py -> build/lib/toil/test/docs
2025-06-05T21:01:06,583   copying src/toil/test/docs/scriptsTest.py -> build/lib/toil/test/docs
2025-06-05T21:01:06,586   creating build/lib/toil/test/utils
2025-06-05T21:01:06,587   copying src/toil/test/utils/utilsTest.py -> build/lib/toil/test/utils
2025-06-05T21:01:06,590   copying src/toil/test/utils/__init__.py -> build/lib/toil/test/utils
2025-06-05T21:01:06,592   copying src/toil/test/utils/toilKillTest.py -> build/lib/toil/test/utils
2025-06-05T21:01:06,594   copying src/toil/test/utils/toilDebugTest.py -> build/lib/toil/test/utils
2025-06-05T21:01:06,596   creating build/lib/toil/test/jobStores
2025-06-05T21:01:06,597   copying src/toil/test/jobStores/__init__.py -> build/lib/toil/test/jobStores
2025-06-05T21:01:06,600   copying src/toil/test/jobStores/jobStoreTest.py -> build/lib/toil/test/jobStores
2025-06-05T21:01:06,604   creating build/lib/toil/test/lib
2025-06-05T21:01:06,605   copying src/toil/test/lib/test_trs.py -> build/lib/toil/test/lib
2025-06-05T21:01:06,607   copying src/toil/test/lib/test_conversions.py -> build/lib/toil/test/lib
2025-06-05T21:01:06,609   copying src/toil/test/lib/dockerTest.py -> build/lib/toil/test/lib
2025-06-05T21:01:06,612   copying src/toil/test/lib/test_ec2.py -> build/lib/toil/test/lib
2025-06-05T21:01:06,614   copying src/toil/test/lib/__init__.py -> build/lib/toil/test/lib
2025-06-05T21:01:06,616   copying src/toil/test/lib/test_misc.py -> build/lib/toil/test/lib
2025-06-05T21:01:06,618   copying src/toil/test/lib/test_history.py -> build/lib/toil/test/lib
2025-06-05T21:01:06,620   creating build/lib/toil/test/cwl
2025-06-05T21:01:06,621   copying src/toil/test/cwl/__init__.py -> build/lib/toil/test/cwl
2025-06-05T21:01:06,623   copying src/toil/test/cwl/cwlTest.py -> build/lib/toil/test/cwl
2025-06-05T21:01:06,627   copying src/toil/test/cwl/conftest.py -> build/lib/toil/test/cwl
2025-06-05T21:01:06,630   creating build/lib/toil/test/src
2025-06-05T21:01:06,631   copying src/toil/test/src/systemTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,633   copying src/toil/test/src/busTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,635   copying src/toil/test/src/toilContextManagerTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,637   copying src/toil/test/src/importExportFileTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,639   copying src/toil/test/src/regularLogTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,642   copying src/toil/test/src/jobFileStoreTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,644   copying src/toil/test/src/autoDeploymentTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,647   copying src/toil/test/src/environmentTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,649   copying src/toil/test/src/__init__.py -> build/lib/toil/test/src
2025-06-05T21:01:06,651   copying src/toil/test/src/jobServiceTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,653   copying src/toil/test/src/restartDAGTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,656   copying src/toil/test/src/realtimeLoggerTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,658   copying src/toil/test/src/checkpointTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,660   copying src/toil/test/src/resumabilityTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,662   copying src/toil/test/src/resourceTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,665   copying src/toil/test/src/helloWorldTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,667   copying src/toil/test/src/promisedRequirementTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,669   copying src/toil/test/src/deferredFunctionTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,672   copying src/toil/test/src/userDefinedJobArgTypeTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,674   copying src/toil/test/src/threadingTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,676   copying src/toil/test/src/jobEncapsulationTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,678   copying src/toil/test/src/jobTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,681   copying src/toil/test/src/jobDescriptionTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,683   copying src/toil/test/src/workerTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,686   copying src/toil/test/src/miscTests.py -> build/lib/toil/test/src
2025-06-05T21:01:06,688   copying src/toil/test/src/fileStoreTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,692   copying src/toil/test/src/retainTempDirTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,694   copying src/toil/test/src/dockerCheckTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,696   copying src/toil/test/src/promisesTest.py -> build/lib/toil/test/src
2025-06-05T21:01:06,699   creating build/lib/toil/test/batchSystems
2025-06-05T21:01:06,700   copying src/toil/test/batchSystems/test_lsf_helper.py -> build/lib/toil/test/batchSystems
2025-06-05T21:01:06,702   copying src/toil/test/batchSystems/__init__.py -> build/lib/toil/test/batchSystems
2025-06-05T21:01:06,704   copying src/toil/test/batchSystems/test_slurm.py -> build/lib/toil/test/batchSystems
2025-06-05T21:01:06,707   copying src/toil/test/batchSystems/batchSystemTest.py -> build/lib/toil/test/batchSystems
2025-06-05T21:01:06,711   copying src/toil/test/batchSystems/batch_system_plugin_test.py -> build/lib/toil/test/batchSystems
2025-06-05T21:01:06,713   copying src/toil/test/batchSystems/test_gridengine.py -> build/lib/toil/test/batchSystems
2025-06-05T21:01:06,716   creating build/lib/toil/test/provisioners/aws
2025-06-05T21:01:06,717   copying src/toil/test/provisioners/aws/__init__.py -> build/lib/toil/test/provisioners/aws
2025-06-05T21:01:06,719   copying src/toil/test/provisioners/aws/awsProvisionerTest.py -> build/lib/toil/test/provisioners/aws
2025-06-05T21:01:06,723   creating build/lib/toil/test/lib/aws
2025-06-05T21:01:06,724   copying src/toil/test/lib/aws/test_s3.py -> build/lib/toil/test/lib/aws
2025-06-05T21:01:06,726   copying src/toil/test/lib/aws/__init__.py -> build/lib/toil/test/lib/aws
2025-06-05T21:01:06,727   copying src/toil/test/lib/aws/test_utils.py -> build/lib/toil/test/lib/aws
2025-06-05T21:01:06,729   copying src/toil/test/lib/aws/test_iam.py -> build/lib/toil/test/lib/aws
2025-06-05T21:01:06,732   creating build/lib/toil/batchSystems/mesos
2025-06-05T21:01:06,733   copying src/toil/batchSystems/mesos/__init__.py -> build/lib/toil/batchSystems/mesos
2025-06-05T21:01:06,735   copying src/toil/batchSystems/mesos/conftest.py -> build/lib/toil/batchSystems/mesos
2025-06-05T21:01:06,737   copying src/toil/batchSystems/mesos/batchSystem.py -> build/lib/toil/batchSystems/mesos
2025-06-05T21:01:06,741   copying src/toil/batchSystems/mesos/executor.py -> build/lib/toil/batchSystems/mesos
2025-06-05T21:01:06,744   creating build/lib/toil/batchSystems/mesos/test
2025-06-05T21:01:06,745   copying src/toil/batchSystems/mesos/test/__init__.py -> build/lib/toil/batchSystems/mesos/test
2025-06-05T21:01:06,748   running egg_info
2025-06-05T21:01:06,762   writing src/toil.egg-info/PKG-INFO
2025-06-05T21:01:06,802   writing dependency_links to src/toil.egg-info/dependency_links.txt
2025-06-05T21:01:06,803   writing entry points to src/toil.egg-info/entry_points.txt
2025-06-05T21:01:06,831   writing requirements to src/toil.egg-info/requires.txt
2025-06-05T21:01:06,832   writing top-level names to src/toil.egg-info/top_level.txt
2025-06-05T21:01:06,905   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2025-06-05T21:01:06,909   reading manifest file 'src/toil.egg-info/SOURCES.txt'
2025-06-05T21:01:06,941   reading manifest template 'MANIFEST.in'
2025-06-05T21:01:07,167   adding license file 'LICENSE'
2025-06-05T21:01:07,193   writing manifest file 'src/toil.egg-info/SOURCES.txt'
2025-06-05T21:01:07,201   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.cwl.directory.directory' is absent from the `packages` configuration.
2025-06-05T21:01:07,202   !!

2025-06-05T21:01:07,203           ********************************************************************************
2025-06-05T21:01:07,204           ############################
2025-06-05T21:01:07,205           # Package would be ignored #
2025-06-05T21:01:07,205           ############################
2025-06-05T21:01:07,206           Python recognizes 'toil.test.cwl.directory.directory' as an importable package[^1],
2025-06-05T21:01:07,206           but it is absent from setuptools' `packages` configuration.

2025-06-05T21:01:07,207           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-05T21:01:07,208           package, please make sure that 'toil.test.cwl.directory.directory' is explicitly added
2025-06-05T21:01:07,208           to the `packages` configuration field.

2025-06-05T21:01:07,209           Alternatively, you can also rely on setuptools' discovery methods
2025-06-05T21:01:07,210           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-05T21:01:07,210           instead of `find_packages(...)`/`find:`).

2025-06-05T21:01:07,211           You can read more about "package discovery" on setuptools documentation page:

2025-06-05T21:01:07,212           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-05T21:01:07,213           If you don't want 'toil.test.cwl.directory.directory' to be distributed and are
2025-06-05T21:01:07,213           already explicitly excluding 'toil.test.cwl.directory.directory' via
2025-06-05T21:01:07,214           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-05T21:01:07,214           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-05T21:01:07,215           combination with a more fine grained `package-data` configuration.

2025-06-05T21:01:07,216           You can read more about "package data files" on setuptools documentation page:

2025-06-05T21:01:07,217           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-05T21:01:07,219           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-05T21:01:07,219                 even if it does not contain any `.py` files.
2025-06-05T21:01:07,220                 On the other hand, currently there is no concept of package data
2025-06-05T21:01:07,220                 directory, all directories are treated like packages.
2025-06-05T21:01:07,221           ********************************************************************************

2025-06-05T21:01:07,222   !!
2025-06-05T21:01:07,222     check.warn(importable)
2025-06-05T21:01:07,223   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.cwl.mock_mpi' is absent from the `packages` configuration.
2025-06-05T21:01:07,224   !!

2025-06-05T21:01:07,225           ********************************************************************************
2025-06-05T21:01:07,226           ############################
2025-06-05T21:01:07,226           # Package would be ignored #
2025-06-05T21:01:07,227           ############################
2025-06-05T21:01:07,227           Python recognizes 'toil.test.cwl.mock_mpi' as an importable package[^1],
2025-06-05T21:01:07,228           but it is absent from setuptools' `packages` configuration.

2025-06-05T21:01:07,229           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-05T21:01:07,230           package, please make sure that 'toil.test.cwl.mock_mpi' is explicitly added
2025-06-05T21:01:07,230           to the `packages` configuration field.

2025-06-05T21:01:07,232           Alternatively, you can also rely on setuptools' discovery methods
2025-06-05T21:01:07,232           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-05T21:01:07,233           instead of `find_packages(...)`/`find:`).

2025-06-05T21:01:07,234           You can read more about "package discovery" on setuptools documentation page:

2025-06-05T21:01:07,236           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-05T21:01:07,237           If you don't want 'toil.test.cwl.mock_mpi' to be distributed and are
2025-06-05T21:01:07,238           already explicitly excluding 'toil.test.cwl.mock_mpi' via
2025-06-05T21:01:07,238           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-05T21:01:07,238           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-05T21:01:07,239           combination with a more fine grained `package-data` configuration.

2025-06-05T21:01:07,240           You can read more about "package data files" on setuptools documentation page:

2025-06-05T21:01:07,241           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-05T21:01:07,242           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-05T21:01:07,243                 even if it does not contain any `.py` files.
2025-06-05T21:01:07,243                 On the other hand, currently there is no concept of package data
2025-06-05T21:01:07,243                 directory, all directories are treated like packages.
2025-06-05T21:01:07,244           ********************************************************************************

2025-06-05T21:01:07,245   !!
2025-06-05T21:01:07,245     check.warn(importable)
2025-06-05T21:01:07,246   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.docs.scripts' is absent from the `packages` configuration.
2025-06-05T21:01:07,246   !!

2025-06-05T21:01:07,247           ********************************************************************************
2025-06-05T21:01:07,248           ############################
2025-06-05T21:01:07,248           # Package would be ignored #
2025-06-05T21:01:07,248           ############################
2025-06-05T21:01:07,249           Python recognizes 'toil.test.docs.scripts' as an importable package[^1],
2025-06-05T21:01:07,250           but it is absent from setuptools' `packages` configuration.

2025-06-05T21:01:07,251           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-05T21:01:07,251           package, please make sure that 'toil.test.docs.scripts' is explicitly added
2025-06-05T21:01:07,252           to the `packages` configuration field.

2025-06-05T21:01:07,253           Alternatively, you can also rely on setuptools' discovery methods
2025-06-05T21:01:07,254           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-05T21:01:07,254           instead of `find_packages(...)`/`find:`).

2025-06-05T21:01:07,255           You can read more about "package discovery" on setuptools documentation page:

2025-06-05T21:01:07,257           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-05T21:01:07,258           If you don't want 'toil.test.docs.scripts' to be distributed and are
2025-06-05T21:01:07,259           already explicitly excluding 'toil.test.docs.scripts' via
2025-06-05T21:01:07,259           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-05T21:01:07,260           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-05T21:01:07,261           combination with a more fine grained `package-data` configuration.

2025-06-05T21:01:07,262           You can read more about "package data files" on setuptools documentation page:

2025-06-05T21:01:07,264           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-05T21:01:07,266           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-05T21:01:07,266                 even if it does not contain any `.py` files.
2025-06-05T21:01:07,267                 On the other hand, currently there is no concept of package data
2025-06-05T21:01:07,268                 directory, all directories are treated like packages.
2025-06-05T21:01:07,269           ********************************************************************************

2025-06-05T21:01:07,270   !!
2025-06-05T21:01:07,270     check.warn(importable)
2025-06-05T21:01:07,271   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.docs.scripts.stagingExampleFiles' is absent from the `packages` configuration.
2025-06-05T21:01:07,271   !!

2025-06-05T21:01:07,272           ********************************************************************************
2025-06-05T21:01:07,273           ############################
2025-06-05T21:01:07,273           # Package would be ignored #
2025-06-05T21:01:07,274           ############################
2025-06-05T21:01:07,274           Python recognizes 'toil.test.docs.scripts.stagingExampleFiles' as an importable package[^1],
2025-06-05T21:01:07,274           but it is absent from setuptools' `packages` configuration.

2025-06-05T21:01:07,275           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-05T21:01:07,276           package, please make sure that 'toil.test.docs.scripts.stagingExampleFiles' is explicitly added
2025-06-05T21:01:07,276           to the `packages` configuration field.

2025-06-05T21:01:07,277           Alternatively, you can also rely on setuptools' discovery methods
2025-06-05T21:01:07,278           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-05T21:01:07,278           instead of `find_packages(...)`/`find:`).

2025-06-05T21:01:07,279           You can read more about "package discovery" on setuptools documentation page:

2025-06-05T21:01:07,280           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-05T21:01:07,281           If you don't want 'toil.test.docs.scripts.stagingExampleFiles' to be distributed and are
2025-06-05T21:01:07,282           already explicitly excluding 'toil.test.docs.scripts.stagingExampleFiles' via
2025-06-05T21:01:07,282           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-05T21:01:07,283           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-05T21:01:07,284           combination with a more fine grained `package-data` configuration.

2025-06-05T21:01:07,285           You can read more about "package data files" on setuptools documentation page:

2025-06-05T21:01:07,286           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-05T21:01:07,288           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-05T21:01:07,288                 even if it does not contain any `.py` files.
2025-06-05T21:01:07,289                 On the other hand, currently there is no concept of package data
2025-06-05T21:01:07,289                 directory, all directories are treated like packages.
2025-06-05T21:01:07,290           ********************************************************************************

2025-06-05T21:01:07,291   !!
2025-06-05T21:01:07,292     check.warn(importable)
2025-06-05T21:01:07,292   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.utils.ABCWorkflowDebug' is absent from the `packages` configuration.
2025-06-05T21:01:07,293   !!

2025-06-05T21:01:07,294           ********************************************************************************
2025-06-05T21:01:07,295           ############################
2025-06-05T21:01:07,295           # Package would be ignored #
2025-06-05T21:01:07,296           ############################
2025-06-05T21:01:07,296           Python recognizes 'toil.test.utils.ABCWorkflowDebug' as an importable package[^1],
2025-06-05T21:01:07,297           but it is absent from setuptools' `packages` configuration.

2025-06-05T21:01:07,298           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-05T21:01:07,299           package, please make sure that 'toil.test.utils.ABCWorkflowDebug' is explicitly added
2025-06-05T21:01:07,300           to the `packages` configuration field.

2025-06-05T21:01:07,312           Alternatively, you can also rely on setuptools' discovery methods
2025-06-05T21:01:07,313           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-05T21:01:07,315           instead of `find_packages(...)`/`find:`).

2025-06-05T21:01:07,334           You can read more about "package discovery" on setuptools documentation page:

2025-06-05T21:01:07,362           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-05T21:01:07,363           If you don't want 'toil.test.utils.ABCWorkflowDebug' to be distributed and are
2025-06-05T21:01:07,364           already explicitly excluding 'toil.test.utils.ABCWorkflowDebug' via
2025-06-05T21:01:07,364           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-05T21:01:07,364           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-05T21:01:07,365           combination with a more fine grained `package-data` configuration.

2025-06-05T21:01:07,367           You can read more about "package data files" on setuptools documentation page:

2025-06-05T21:01:07,369           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-05T21:01:07,372           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-05T21:01:07,372                 even if it does not contain any `.py` files.
2025-06-05T21:01:07,373                 On the other hand, currently there is no concept of package data
2025-06-05T21:01:07,374                 directory, all directories are treated like packages.
2025-06-05T21:01:07,374           ********************************************************************************

2025-06-05T21:01:07,376   !!
2025-06-05T21:01:07,376     check.warn(importable)
2025-06-05T21:01:07,377   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.wdl.md5sum' is absent from the `packages` configuration.
2025-06-05T21:01:07,378   !!

2025-06-05T21:01:07,379           ********************************************************************************
2025-06-05T21:01:07,380           ############################
2025-06-05T21:01:07,381           # Package would be ignored #
2025-06-05T21:01:07,381           ############################
2025-06-05T21:01:07,382           Python recognizes 'toil.test.wdl.md5sum' as an importable package[^1],
2025-06-05T21:01:07,383           but it is absent from setuptools' `packages` configuration.

2025-06-05T21:01:07,384           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-05T21:01:07,385           package, please make sure that 'toil.test.wdl.md5sum' is explicitly added
2025-06-05T21:01:07,386           to the `packages` configuration field.

2025-06-05T21:01:07,387           Alternatively, you can also rely on setuptools' discovery methods
2025-06-05T21:01:07,388           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-05T21:01:07,388           instead of `find_packages(...)`/`find:`).

2025-06-05T21:01:07,390           You can read more about "package discovery" on setuptools documentation page:

2025-06-05T21:01:07,391           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-05T21:01:07,393           If you don't want 'toil.test.wdl.md5sum' to be distributed and are
2025-06-05T21:01:07,393           already explicitly excluding 'toil.test.wdl.md5sum' via
2025-06-05T21:01:07,394           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-05T21:01:07,395           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-05T21:01:07,395           combination with a more fine grained `package-data` configuration.

2025-06-05T21:01:07,397           You can read more about "package data files" on setuptools documentation page:

2025-06-05T21:01:07,399           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-05T21:01:07,400           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-05T21:01:07,401                 even if it does not contain any `.py` files.
2025-06-05T21:01:07,401                 On the other hand, currently there is no concept of package data
2025-06-05T21:01:07,401                 directory, all directories are treated like packages.
2025-06-05T21:01:07,402           ********************************************************************************

2025-06-05T21:01:07,403   !!
2025-06-05T21:01:07,403     check.warn(importable)
2025-06-05T21:01:07,404   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.wdl.miniwdl_self_test' is absent from the `packages` configuration.
2025-06-05T21:01:07,405   !!

2025-06-05T21:01:07,406           ********************************************************************************
2025-06-05T21:01:07,406           ############################
2025-06-05T21:01:07,407           # Package would be ignored #
2025-06-05T21:01:07,407           ############################
2025-06-05T21:01:07,408           Python recognizes 'toil.test.wdl.miniwdl_self_test' as an importable package[^1],
2025-06-05T21:01:07,408           but it is absent from setuptools' `packages` configuration.

2025-06-05T21:01:07,410           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-05T21:01:07,410           package, please make sure that 'toil.test.wdl.miniwdl_self_test' is explicitly added
2025-06-05T21:01:07,410           to the `packages` configuration field.

2025-06-05T21:01:07,411           Alternatively, you can also rely on setuptools' discovery methods
2025-06-05T21:01:07,412           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-05T21:01:07,413           instead of `find_packages(...)`/`find:`).

2025-06-05T21:01:07,414           You can read more about "package discovery" on setuptools documentation page:

2025-06-05T21:01:07,415           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-05T21:01:07,416           If you don't want 'toil.test.wdl.miniwdl_self_test' to be distributed and are
2025-06-05T21:01:07,416           already explicitly excluding 'toil.test.wdl.miniwdl_self_test' via
2025-06-05T21:01:07,417           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-05T21:01:07,417           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-05T21:01:07,418           combination with a more fine grained `package-data` configuration.

2025-06-05T21:01:07,419           You can read more about "package data files" on setuptools documentation page:

2025-06-05T21:01:07,420           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-05T21:01:07,422           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-05T21:01:07,423                 even if it does not contain any `.py` files.
2025-06-05T21:01:07,423                 On the other hand, currently there is no concept of package data
2025-06-05T21:01:07,424                 directory, all directories are treated like packages.
2025-06-05T21:01:07,424           ********************************************************************************

2025-06-05T21:01:07,425   !!
2025-06-05T21:01:07,426     check.warn(importable)
2025-06-05T21:01:07,426   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.wdl.standard_library' is absent from the `packages` configuration.
2025-06-05T21:01:07,427   !!

2025-06-05T21:01:07,428           ********************************************************************************
2025-06-05T21:01:07,429           ############################
2025-06-05T21:01:07,429           # Package would be ignored #
2025-06-05T21:01:07,430           ############################
2025-06-05T21:01:07,431           Python recognizes 'toil.test.wdl.standard_library' as an importable package[^1],
2025-06-05T21:01:07,431           but it is absent from setuptools' `packages` configuration.

2025-06-05T21:01:07,432           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-05T21:01:07,432           package, please make sure that 'toil.test.wdl.standard_library' is explicitly added
2025-06-05T21:01:07,433           to the `packages` configuration field.

2025-06-05T21:01:07,434           Alternatively, you can also rely on setuptools' discovery methods
2025-06-05T21:01:07,434           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-05T21:01:07,435           instead of `find_packages(...)`/`find:`).

2025-06-05T21:01:07,435           You can read more about "package discovery" on setuptools documentation page:

2025-06-05T21:01:07,436           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-05T21:01:07,437           If you don't want 'toil.test.wdl.standard_library' to be distributed and are
2025-06-05T21:01:07,438           already explicitly excluding 'toil.test.wdl.standard_library' via
2025-06-05T21:01:07,438           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-05T21:01:07,439           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-05T21:01:07,439           combination with a more fine grained `package-data` configuration.

2025-06-05T21:01:07,440           You can read more about "package data files" on setuptools documentation page:

2025-06-05T21:01:07,441           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-05T21:01:07,443           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-05T21:01:07,443                 even if it does not contain any `.py` files.
2025-06-05T21:01:07,444                 On the other hand, currently there is no concept of package data
2025-06-05T21:01:07,444                 directory, all directories are treated like packages.
2025-06-05T21:01:07,445           ********************************************************************************

2025-06-05T21:01:07,446   !!
2025-06-05T21:01:07,446     check.warn(importable)
2025-06-05T21:01:07,447   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.wdl.testfiles' is absent from the `packages` configuration.
2025-06-05T21:01:07,447   !!

2025-06-05T21:01:07,448           ********************************************************************************
2025-06-05T21:01:07,449           ############################
2025-06-05T21:01:07,449           # Package would be ignored #
2025-06-05T21:01:07,450           ############################
2025-06-05T21:01:07,450           Python recognizes 'toil.test.wdl.testfiles' as an importable package[^1],
2025-06-05T21:01:07,451           but it is absent from setuptools' `packages` configuration.

2025-06-05T21:01:07,452           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-05T21:01:07,453           package, please make sure that 'toil.test.wdl.testfiles' is explicitly added
2025-06-05T21:01:07,453           to the `packages` configuration field.

2025-06-05T21:01:07,454           Alternatively, you can also rely on setuptools' discovery methods
2025-06-05T21:01:07,455           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-05T21:01:07,455           instead of `find_packages(...)`/`find:`).

2025-06-05T21:01:07,457           You can read more about "package discovery" on setuptools documentation page:

2025-06-05T21:01:07,458           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-05T21:01:07,459           If you don't want 'toil.test.wdl.testfiles' to be distributed and are
2025-06-05T21:01:07,459           already explicitly excluding 'toil.test.wdl.testfiles' via
2025-06-05T21:01:07,460           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-05T21:01:07,461           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-05T21:01:07,461           combination with a more fine grained `package-data` configuration.

2025-06-05T21:01:07,462           You can read more about "package data files" on setuptools documentation page:

2025-06-05T21:01:07,463           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-05T21:01:07,464           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-05T21:01:07,465                 even if it does not contain any `.py` files.
2025-06-05T21:01:07,465                 On the other hand, currently there is no concept of package data
2025-06-05T21:01:07,465                 directory, all directories are treated like packages.
2025-06-05T21:01:07,466           ********************************************************************************

2025-06-05T21:01:07,467   !!
2025-06-05T21:01:07,467     check.warn(importable)
2025-06-05T21:01:07,468   /tmp/pip-build-env-za4nwtmz/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'toil.test.wdl.wdl_specification' is absent from the `packages` configuration.
2025-06-05T21:01:07,468   !!

2025-06-05T21:01:07,469           ********************************************************************************
2025-06-05T21:01:07,470           ############################
2025-06-05T21:01:07,470           # Package would be ignored #
2025-06-05T21:01:07,471           ############################
2025-06-05T21:01:07,471           Python recognizes 'toil.test.wdl.wdl_specification' as an importable package[^1],
2025-06-05T21:01:07,472           but it is absent from setuptools' `packages` configuration.

2025-06-05T21:01:07,473           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-05T21:01:07,473           package, please make sure that 'toil.test.wdl.wdl_specification' is explicitly added
2025-06-05T21:01:07,474           to the `packages` configuration field.

2025-06-05T21:01:07,475           Alternatively, you can also rely on setuptools' discovery methods
2025-06-05T21:01:07,475           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-05T21:01:07,476           instead of `find_packages(...)`/`find:`).

2025-06-05T21:01:07,477           You can read more about "package discovery" on setuptools documentation page:

2025-06-05T21:01:07,478           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-05T21:01:07,479           If you don't want 'toil.test.wdl.wdl_specification' to be distributed and are
2025-06-05T21:01:07,480           already explicitly excluding 'toil.test.wdl.wdl_specification' via
2025-06-05T21:01:07,480           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-05T21:01:07,481           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-05T21:01:07,481           combination with a more fine grained `package-data` configuration.

2025-06-05T21:01:07,483           You can read more about "package data files" on setuptools documentation page:

2025-06-05T21:01:07,484           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-05T21:01:07,485           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-05T21:01:07,486                 even if it does not contain any `.py` files.
2025-06-05T21:01:07,487                 On the other hand, currently there is no concept of package data
2025-06-05T21:01:07,487                 directory, all directories are treated like packages.
2025-06-05T21:01:07,488           ********************************************************************************

2025-06-05T21:01:07,489   !!
2025-06-05T21:01:07,490     check.warn(importable)
2025-06-05T21:01:07,490   copying src/toil/server/api_spec/LICENSE -> build/lib/toil/server/api_spec
2025-06-05T21:01:07,490   copying src/toil/server/api_spec/README.rst -> build/lib/toil/server/api_spec
2025-06-05T21:01:07,491   copying src/toil/server/api_spec/workflow_execution_service.swagger.yaml -> build/lib/toil/server/api_spec
2025-06-05T21:01:07,491   copying src/toil/lib/aws/utils.py.orig -> build/lib/toil/lib/aws
2025-06-05T21:01:07,492   copying src/toil/test/cactus/pestis.tar.gz -> build/lib/toil/test/cactus
2025-06-05T21:01:07,492   copying src/toil/test/wdl/lint_error.wdl -> build/lib/toil/test/wdl
2025-06-05T21:01:07,493   copying src/toil/test/wdl/test.csv -> build/lib/toil/test/wdl
2025-06-05T21:01:07,493   copying src/toil/test/wdl/test.tsv -> build/lib/toil/test/wdl
2025-06-05T21:01:07,493   creating build/lib/toil/test/wdl/md5sum
2025-06-05T21:01:07,494   copying src/toil/test/wdl/md5sum/empty_file.json -> build/lib/toil/test/wdl/md5sum
2025-06-05T21:01:07,494   copying src/toil/test/wdl/md5sum/md5sum-gs.json -> build/lib/toil/test/wdl/md5sum
2025-06-05T21:01:07,495   copying src/toil/test/wdl/md5sum/md5sum.1.0.wdl -> build/lib/toil/test/wdl/md5sum
2025-06-05T21:01:07,495   copying src/toil/test/wdl/md5sum/md5sum.input -> build/lib/toil/test/wdl/md5sum
2025-06-05T21:01:07,496   copying src/toil/test/wdl/md5sum/md5sum.json -> build/lib/toil/test/wdl/md5sum
2025-06-05T21:01:07,496   copying src/toil/test/wdl/md5sum/md5sum.wdl -> build/lib/toil/test/wdl/md5sum
2025-06-05T21:01:07,497   creating build/lib/toil/test/wdl/miniwdl_self_test
2025-06-05T21:01:07,497   copying src/toil/test/wdl/miniwdl_self_test/inputs-namespaced.json -> build/lib/toil/test/wdl/miniwdl_self_test
2025-06-05T21:01:07,498   copying src/toil/test/wdl/miniwdl_self_test/inputs.json -> build/lib/toil/test/wdl/miniwdl_self_test
2025-06-05T21:01:07,498   copying src/toil/test/wdl/miniwdl_self_test/self_test.wdl -> build/lib/toil/test/wdl/miniwdl_self_test
2025-06-05T21:01:07,499   creating build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,499   copying src/toil/test/wdl/standard_library/as_map.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,500   copying src/toil/test/wdl/standard_library/as_map_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,500   copying src/toil/test/wdl/standard_library/as_pairs.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,501   copying src/toil/test/wdl/standard_library/as_pairs_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,501   copying src/toil/test/wdl/standard_library/ceil.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,502   copying src/toil/test/wdl/standard_library/ceil_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,502   copying src/toil/test/wdl/standard_library/ceil_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,503   copying src/toil/test/wdl/standard_library/collect_by_key.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,503   copying src/toil/test/wdl/standard_library/collect_by_key_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,504   copying src/toil/test/wdl/standard_library/cross.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,504   copying src/toil/test/wdl/standard_library/cross_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,505   copying src/toil/test/wdl/standard_library/flatten.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,505   copying src/toil/test/wdl/standard_library/flatten_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,506   copying src/toil/test/wdl/standard_library/floor.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,506   copying src/toil/test/wdl/standard_library/floor_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,507   copying src/toil/test/wdl/standard_library/floor_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,508   copying src/toil/test/wdl/standard_library/keys.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,508   copying src/toil/test/wdl/standard_library/keys_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,509   copying src/toil/test/wdl/standard_library/length.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,509   copying src/toil/test/wdl/standard_library/length_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,510   copying src/toil/test/wdl/standard_library/length_as_input_with_map.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,510   copying src/toil/test/wdl/standard_library/length_as_input_with_map.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,510   copying src/toil/test/wdl/standard_library/length_invalid.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,511   copying src/toil/test/wdl/standard_library/range.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,511   copying src/toil/test/wdl/standard_library/range_0.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,512   copying src/toil/test/wdl/standard_library/range_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,512   copying src/toil/test/wdl/standard_library/range_invalid.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,513   copying src/toil/test/wdl/standard_library/read_boolean.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,513   copying src/toil/test/wdl/standard_library/read_boolean_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,514   copying src/toil/test/wdl/standard_library/read_float.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,514   copying src/toil/test/wdl/standard_library/read_float_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,515   copying src/toil/test/wdl/standard_library/read_int.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,515   copying src/toil/test/wdl/standard_library/read_int_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,516   copying src/toil/test/wdl/standard_library/read_json.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,516   copying src/toil/test/wdl/standard_library/read_json_as_output.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,517   copying src/toil/test/wdl/standard_library/read_lines.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,520   copying src/toil/test/wdl/standard_library/read_lines_as_output.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,522   copying src/toil/test/wdl/standard_library/read_map.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,524   copying src/toil/test/wdl/standard_library/read_map_as_output.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,527   copying src/toil/test/wdl/standard_library/read_string.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,530   copying src/toil/test/wdl/standard_library/read_string_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,532   copying src/toil/test/wdl/standard_library/read_tsv.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,534   copying src/toil/test/wdl/standard_library/read_tsv_as_output.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,536   copying src/toil/test/wdl/standard_library/round.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,539   copying src/toil/test/wdl/standard_library/round_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,541   copying src/toil/test/wdl/standard_library/round_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,543   copying src/toil/test/wdl/standard_library/size.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,546   copying src/toil/test/wdl/standard_library/size_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,548   copying src/toil/test/wdl/standard_library/size_as_output.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,550   copying src/toil/test/wdl/standard_library/stderr.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,553   copying src/toil/test/wdl/standard_library/stderr_as_output.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,555   copying src/toil/test/wdl/standard_library/stdout.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,557   copying src/toil/test/wdl/standard_library/stdout_as_output.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,559   copying src/toil/test/wdl/standard_library/sub.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,562   copying src/toil/test/wdl/standard_library/sub_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,564   copying src/toil/test/wdl/standard_library/sub_as_input_with_file.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,566   copying src/toil/test/wdl/standard_library/transpose.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,568   copying src/toil/test/wdl/standard_library/transpose_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,571   copying src/toil/test/wdl/standard_library/write_json.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,573   copying src/toil/test/wdl/standard_library/write_json_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,575   copying src/toil/test/wdl/standard_library/write_lines.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,578   copying src/toil/test/wdl/standard_library/write_lines_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,580   copying src/toil/test/wdl/standard_library/write_map.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,582   copying src/toil/test/wdl/standard_library/write_map_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,585   copying src/toil/test/wdl/standard_library/write_tsv.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,587   copying src/toil/test/wdl/standard_library/write_tsv_as_command.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,589   copying src/toil/test/wdl/standard_library/zip.json -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,592   copying src/toil/test/wdl/standard_library/zip_as_input.wdl -> build/lib/toil/test/wdl/standard_library
2025-06-05T21:01:07,594   creating build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,595   copying src/toil/test/wdl/testfiles/croo.wdl -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,597   copying src/toil/test/wdl/testfiles/drop_files.wdl -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,600   copying src/toil/test/wdl/testfiles/drop_files_subworkflow.wdl -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,602   copying src/toil/test/wdl/testfiles/empty.txt -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,604   copying src/toil/test/wdl/testfiles/not_enough_outputs.wdl -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,606   copying src/toil/test/wdl/testfiles/random.wdl -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,609   copying src/toil/test/wdl/testfiles/string_file_coercion.json -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,611   copying src/toil/test/wdl/testfiles/string_file_coercion.wdl -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,613   copying src/toil/test/wdl/testfiles/test.json -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,616   copying src/toil/test/wdl/testfiles/test_boolean.txt -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,618   copying src/toil/test/wdl/testfiles/test_float.txt -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,620   copying src/toil/test/wdl/testfiles/test_int.txt -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,622   copying src/toil/test/wdl/testfiles/test_lines.txt -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,624   copying src/toil/test/wdl/testfiles/test_map.txt -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,627   copying src/toil/test/wdl/testfiles/test_string.txt -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,629   copying src/toil/test/wdl/testfiles/url_to_file.wdl -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,631   copying src/toil/test/wdl/testfiles/url_to_optional_file.wdl -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,634   copying src/toil/test/wdl/testfiles/vocab.json -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,636   copying src/toil/test/wdl/testfiles/vocab.wdl -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,638   copying src/toil/test/wdl/testfiles/wait.wdl -> build/lib/toil/test/wdl/testfiles
2025-06-05T21:01:07,641   creating build/lib/toil/test/wdl/wdl_specification
2025-06-05T21:01:07,642   copying src/toil/test/wdl/wdl_specification/type_pair.json -> build/lib/toil/test/wdl/wdl_specification
2025-06-05T21:01:07,645   copying src/toil/test/wdl/wdl_specification/type_pair_basic.wdl -> build/lib/toil/test/wdl/wdl_specification
2025-06-05T21:01:07,647   copying src/toil/test/wdl/wdl_specification/type_pair_with_files.wdl -> build/lib/toil/test/wdl/wdl_specification
2025-06-05T21:01:07,650   copying src/toil/test/wdl/wdl_specification/v1_spec.json -> build/lib/toil/test/wdl/wdl_specification
2025-06-05T21:01:07,652   copying src/toil/test/wdl/wdl_specification/v1_spec_declaration.wdl -> build/lib/toil/test/wdl/wdl_specification
2025-06-05T21:01:07,655   creating build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,656   copying src/toil/test/docs/scripts/example_alwaysfail.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,659   copying src/toil/test/docs/scripts/example_alwaysfail_with_files.wdl -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,662   copying src/toil/test/docs/scripts/example_cachingbenchmark.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,665   copying src/toil/test/docs/scripts/tutorial_arguments.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,668   copying src/toil/test/docs/scripts/tutorial_debugging.patch -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,671   copying src/toil/test/docs/scripts/tutorial_debugging_hangs.wdl -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,673   copying src/toil/test/docs/scripts/tutorial_debugging_works.wdl -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,676   copying src/toil/test/docs/scripts/tutorial_docker.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,678   copying src/toil/test/docs/scripts/tutorial_dynamic.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,680   copying src/toil/test/docs/scripts/tutorial_encapsulation.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,682   copying src/toil/test/docs/scripts/tutorial_encapsulation2.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,685   copying src/toil/test/docs/scripts/tutorial_helloworld.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,687   copying src/toil/test/docs/scripts/tutorial_invokeworkflow.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,689   copying src/toil/test/docs/scripts/tutorial_invokeworkflow2.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,692   copying src/toil/test/docs/scripts/tutorial_jobfunctions.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,694   copying src/toil/test/docs/scripts/tutorial_managing.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,696   copying src/toil/test/docs/scripts/tutorial_managing2.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,699   copying src/toil/test/docs/scripts/tutorial_multiplejobs.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,701   copying src/toil/test/docs/scripts/tutorial_multiplejobs2.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,704   copying src/toil/test/docs/scripts/tutorial_multiplejobs3.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,706   copying src/toil/test/docs/scripts/tutorial_promises.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,709   copying src/toil/test/docs/scripts/tutorial_promises2.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,711   copying src/toil/test/docs/scripts/tutorial_quickstart.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,714   copying src/toil/test/docs/scripts/tutorial_requirements.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,716   copying src/toil/test/docs/scripts/tutorial_services.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,719   copying src/toil/test/docs/scripts/tutorial_staging.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,721   copying src/toil/test/docs/scripts/tutorial_stats.py -> build/lib/toil/test/docs/scripts
2025-06-05T21:01:07,723   creating build/lib/toil/test/docs/scripts/stagingExampleFiles
2025-06-05T21:01:07,724   copying src/toil/test/docs/scripts/stagingExampleFiles/in.txt -> build/lib/toil/test/docs/scripts/stagingExampleFiles
2025-06-05T21:01:07,727   copying src/toil/test/docs/scripts/stagingExampleFiles/out.txt -> build/lib/toil/test/docs/scripts/stagingExampleFiles
2025-06-05T21:01:07,729   creating build/lib/toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:07,730   copying src/toil/test/utils/ABCWorkflowDebug/B_file.txt -> build/lib/toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:07,732   copying src/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py -> build/lib/toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:07,735   copying src/toil/test/utils/ABCWorkflowDebug/mkFile.py -> build/lib/toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:07,737   copying src/toil/test/utils/ABCWorkflowDebug/sleep.cwl -> build/lib/toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:07,740   copying src/toil/test/utils/ABCWorkflowDebug/sleep.yaml -> build/lib/toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:07,742   copying src/toil/test/cwl/2.fasta -> build/lib/toil/test/cwl
2025-06-05T21:01:07,744   copying src/toil/test/cwl/2.fastq -> build/lib/toil/test/cwl
2025-06-05T21:01:07,746   copying src/toil/test/cwl/alwaysfails.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,749   copying src/toil/test/cwl/colon_test_output.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,751   copying src/toil/test/cwl/colon_test_output_job.yaml -> build/lib/toil/test/cwl
2025-06-05T21:01:07,753   copying src/toil/test/cwl/conditional_wf.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,755   copying src/toil/test/cwl/conditional_wf.yaml -> build/lib/toil/test/cwl
2025-06-05T21:01:07,758   copying src/toil/test/cwl/directory_from_directory.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,760   copying src/toil/test/cwl/download.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,762   copying src/toil/test/cwl/download_directory.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,765   copying src/toil/test/cwl/download_directory_file.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,767   copying src/toil/test/cwl/download_directory_s3.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,769   copying src/toil/test/cwl/download_file.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,772   copying src/toil/test/cwl/download_http.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,774   copying src/toil/test/cwl/download_https.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,776   copying src/toil/test/cwl/download_s3.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,778   copying src/toil/test/cwl/download_subdirectory.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,781   copying src/toil/test/cwl/download_subdirectory_file.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,783   copying src/toil/test/cwl/download_subdirectory_s3.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,786   copying src/toil/test/cwl/echo-stderr.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,788   copying src/toil/test/cwl/echo-stdout-log-dir.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,790   copying src/toil/test/cwl/echo.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,792   copying src/toil/test/cwl/echo_string.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,795   copying src/toil/test/cwl/echo_string_scatter_capture_stdout.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,797   copying src/toil/test/cwl/empty.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,799   copying src/toil/test/cwl/file_from_directory.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,801   copying src/toil/test/cwl/glob_dir.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,804   copying src/toil/test/cwl/load_contents.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,806   copying src/toil/test/cwl/measure_default_memory.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,808   copying src/toil/test/cwl/mpi_simple.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,810   copying src/toil/test/cwl/not_run_required_input.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,812   copying src/toil/test/cwl/nvidia_smi.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,814   copying src/toil/test/cwl/optional-file-exists.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,817   copying src/toil/test/cwl/optional-file-missing.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,819   copying src/toil/test/cwl/optional-file.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,821   copying src/toil/test/cwl/preemptible.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,823   copying src/toil/test/cwl/preemptible_expression.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,826   copying src/toil/test/cwl/preemptible_expression.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,828   copying src/toil/test/cwl/revsort-job-missing.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,830   copying src/toil/test/cwl/revsort-job.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,832   copying src/toil/test/cwl/revsort.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,834   copying src/toil/test/cwl/revsort2.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,837   copying src/toil/test/cwl/revtool.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,839   copying src/toil/test/cwl/revtool2.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,841   copying src/toil/test/cwl/s3_secondary_file.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,843   copying src/toil/test/cwl/s3_secondary_file.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,846   copying src/toil/test/cwl/scatter_duplicate_outputs.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,848   copying src/toil/test/cwl/seqtk_seq.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,851   copying src/toil/test/cwl/seqtk_seq_job.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,853   copying src/toil/test/cwl/sorttool.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,855   copying src/toil/test/cwl/stream.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,857   copying src/toil/test/cwl/stream.json -> build/lib/toil/test/cwl
2025-06-05T21:01:07,860   copying src/toil/test/cwl/test_filename_conflict_detection.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,862   copying src/toil/test/cwl/test_filename_conflict_detection_at_root.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,865   copying src/toil/test/cwl/test_filename_conflict_resolution.cwl -> build/lib/toil/test/cwl
2025-06-05T21:01:07,867   copying src/toil/test/cwl/whale.txt -> build/lib/toil/test/cwl
2025-06-05T21:01:07,869   creating build/lib/toil/test/cwl/directory/directory
2025-06-05T21:01:07,871   copying src/toil/test/cwl/directory/directory/file.txt -> build/lib/toil/test/cwl/directory/directory
2025-06-05T21:01:07,873   creating build/lib/toil/test/cwl/mock_mpi
2025-06-05T21:01:07,874   copying src/toil/test/cwl/mock_mpi/fake_mpi.yml -> build/lib/toil/test/cwl/mock_mpi
2025-06-05T21:01:07,877   copying src/toil/test/cwl/mock_mpi/fake_mpi_run.py -> build/lib/toil/test/cwl/mock_mpi
2025-06-05T21:01:07,879   creating build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,880   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.dat -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,882   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.f0 -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,884   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.f1 -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,886   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.f1i -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,888   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.f2 -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,890   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.f2_TSM0 -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,892   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.f3 -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,894   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.f3_TSM0 -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,896   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.f4 -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,898   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.f4_TSM0 -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,900   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.f5 -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,902   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.info -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,904   copying src/toil/test/cwl/test_filename_conflict_resolution.ms/table.lock -> build/lib/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:07,951   installing to build/bdist.linux-armv7l/wheel
2025-06-05T21:01:07,952   running install
2025-06-05T21:01:07,975   running install_lib
2025-06-05T21:01:07,994   creating build/bdist.linux-armv7l/wheel
2025-06-05T21:01:07,997   creating build/bdist.linux-armv7l/wheel/toil
2025-06-05T21:01:07,999   creating build/bdist.linux-armv7l/wheel/toil/server
2025-06-05T21:01:08,000   copying build/lib/toil/server/wsgi_app.py -> build/bdist.linux-armv7l/wheel/./toil/server
2025-06-05T21:01:08,002   copying build/lib/toil/server/app.py -> build/bdist.linux-armv7l/wheel/./toil/server
2025-06-05T21:01:08,005   creating build/bdist.linux-armv7l/wheel/toil/server/cli
2025-06-05T21:01:08,006   copying build/lib/toil/server/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/server/cli
2025-06-05T21:01:08,008   copying build/lib/toil/server/cli/wes_cwl_runner.py -> build/bdist.linux-armv7l/wheel/./toil/server/cli
2025-06-05T21:01:08,011   copying build/lib/toil/server/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/server
2025-06-05T21:01:08,012   copying build/lib/toil/server/celery_app.py -> build/bdist.linux-armv7l/wheel/./toil/server
2025-06-05T21:01:08,015   creating build/bdist.linux-armv7l/wheel/toil/server/api_spec
2025-06-05T21:01:08,016   copying build/lib/toil/server/api_spec/LICENSE -> build/bdist.linux-armv7l/wheel/./toil/server/api_spec
2025-06-05T21:01:08,019   copying build/lib/toil/server/api_spec/README.rst -> build/bdist.linux-armv7l/wheel/./toil/server/api_spec
2025-06-05T21:01:08,021   copying build/lib/toil/server/api_spec/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/server/api_spec
2025-06-05T21:01:08,023   copying build/lib/toil/server/api_spec/workflow_execution_service.swagger.yaml -> build/bdist.linux-armv7l/wheel/./toil/server/api_spec
2025-06-05T21:01:08,026   copying build/lib/toil/server/utils.py -> build/bdist.linux-armv7l/wheel/./toil/server
2025-06-05T21:01:08,029   creating build/bdist.linux-armv7l/wheel/toil/server/wes
2025-06-05T21:01:08,030   copying build/lib/toil/server/wes/abstract_backend.py -> build/bdist.linux-armv7l/wheel/./toil/server/wes
2025-06-05T21:01:08,033   copying build/lib/toil/server/wes/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/server/wes
2025-06-05T21:01:08,035   copying build/lib/toil/server/wes/tasks.py -> build/bdist.linux-armv7l/wheel/./toil/server/wes
2025-06-05T21:01:08,038   copying build/lib/toil/server/wes/toil_backend.py -> build/bdist.linux-armv7l/wheel/./toil/server/wes
2025-06-05T21:01:08,041   copying build/lib/toil/server/wes/amazon_wes_utils.py -> build/bdist.linux-armv7l/wheel/./toil/server/wes
2025-06-05T21:01:08,043   copying build/lib/toil/job.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:08,049   creating build/bdist.linux-armv7l/wheel/toil/options
2025-06-05T21:01:08,050   copying build/lib/toil/options/runner.py -> build/bdist.linux-armv7l/wheel/./toil/options
2025-06-05T21:01:08,052   copying build/lib/toil/options/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/options
2025-06-05T21:01:08,053   copying build/lib/toil/options/cwl.py -> build/bdist.linux-armv7l/wheel/./toil/options
2025-06-05T21:01:08,056   copying build/lib/toil/options/common.py -> build/bdist.linux-armv7l/wheel/./toil/options
2025-06-05T21:01:08,059   copying build/lib/toil/options/wdl.py -> build/bdist.linux-armv7l/wheel/./toil/options
2025-06-05T21:01:08,062   creating build/bdist.linux-armv7l/wheel/toil/wdl
2025-06-05T21:01:08,063   copying build/lib/toil/wdl/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/wdl
2025-06-05T21:01:08,065   copying build/lib/toil/wdl/wdltoil.py -> build/bdist.linux-armv7l/wheel/./toil/wdl
2025-06-05T21:01:08,071   copying build/lib/toil/wdl/utils.py -> build/bdist.linux-armv7l/wheel/./toil/wdl
2025-06-05T21:01:08,073   creating build/bdist.linux-armv7l/wheel/toil/provisioners
2025-06-05T21:01:08,075   creating build/bdist.linux-armv7l/wheel/toil/provisioners/aws
2025-06-05T21:01:08,076   copying build/lib/toil/provisioners/aws/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/provisioners/aws
2025-06-05T21:01:08,078   copying build/lib/toil/provisioners/aws/awsProvisioner.py -> build/bdist.linux-armv7l/wheel/./toil/provisioners/aws
2025-06-05T21:01:08,082   copying build/lib/toil/provisioners/gceProvisioner.py -> build/bdist.linux-armv7l/wheel/./toil/provisioners
2025-06-05T21:01:08,085   copying build/lib/toil/provisioners/clusterScaler.py -> build/bdist.linux-armv7l/wheel/./toil/provisioners
2025-06-05T21:01:08,089   copying build/lib/toil/provisioners/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/provisioners
2025-06-05T21:01:08,091   copying build/lib/toil/provisioners/node.py -> build/bdist.linux-armv7l/wheel/./toil/provisioners
2025-06-05T21:01:08,094   copying build/lib/toil/provisioners/abstractProvisioner.py -> build/bdist.linux-armv7l/wheel/./toil/provisioners
2025-06-05T21:01:08,097   copying build/lib/toil/version.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:08,098   copying build/lib/toil/__init__.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:08,101   copying build/lib/toil/toilState.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:08,104   creating build/bdist.linux-armv7l/wheel/toil/utils
2025-06-05T21:01:08,105   copying build/lib/toil/utils/toilLaunchCluster.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,108   copying build/lib/toil/utils/toilClean.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,110   copying build/lib/toil/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,111   copying build/lib/toil/utils/toilKill.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,113   copying build/lib/toil/utils/toilStatus.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,116   copying build/lib/toil/utils/toilDebugFile.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,118   copying build/lib/toil/utils/toilSshCluster.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,120   copying build/lib/toil/utils/toilMain.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,122   copying build/lib/toil/utils/toilUpdateEC2Instances.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,124   copying build/lib/toil/utils/toilDebugJob.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,126   copying build/lib/toil/utils/toilConfig.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,127   copying build/lib/toil/utils/toilStats.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,130   copying build/lib/toil/utils/toilDestroyCluster.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,132   copying build/lib/toil/utils/toilServer.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,134   copying build/lib/toil/utils/toilRsyncCluster.py -> build/bdist.linux-armv7l/wheel/./toil/utils
2025-06-05T21:01:08,136   creating build/bdist.linux-armv7l/wheel/toil/jobStores
2025-06-05T21:01:08,138   creating build/bdist.linux-armv7l/wheel/toil/jobStores/aws
2025-06-05T21:01:08,139   copying build/lib/toil/jobStores/aws/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/jobStores/aws
2025-06-05T21:01:08,140   copying build/lib/toil/jobStores/aws/jobStore.py -> build/bdist.linux-armv7l/wheel/./toil/jobStores/aws
2025-06-05T21:01:08,144   copying build/lib/toil/jobStores/aws/utils.py -> build/bdist.linux-armv7l/wheel/./toil/jobStores/aws
2025-06-05T21:01:08,147   copying build/lib/toil/jobStores/fileJobStore.py -> build/bdist.linux-armv7l/wheel/./toil/jobStores
2025-06-05T21:01:08,150   copying build/lib/toil/jobStores/abstractJobStore.py -> build/bdist.linux-armv7l/wheel/./toil/jobStores
2025-06-05T21:01:08,153   copying build/lib/toil/jobStores/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/jobStores
2025-06-05T21:01:08,155   copying build/lib/toil/jobStores/conftest.py -> build/bdist.linux-armv7l/wheel/./toil/jobStores
2025-06-05T21:01:08,157   copying build/lib/toil/jobStores/utils.py -> build/bdist.linux-armv7l/wheel/./toil/jobStores
2025-06-05T21:01:08,159   copying build/lib/toil/jobStores/googleJobStore.py -> build/bdist.linux-armv7l/wheel/./toil/jobStores
2025-06-05T21:01:08,163   creating build/bdist.linux-armv7l/wheel/toil/lib
2025-06-05T21:01:08,164   creating build/bdist.linux-armv7l/wheel/toil/lib/aws
2025-06-05T21:01:08,166   copying build/lib/toil/lib/aws/ami.py -> build/bdist.linux-armv7l/wheel/./toil/lib/aws
2025-06-05T21:01:08,168   copying build/lib/toil/lib/aws/s3.py -> build/bdist.linux-armv7l/wheel/./toil/lib/aws
2025-06-05T21:01:08,170   copying build/lib/toil/lib/aws/utils.py.orig -> build/bdist.linux-armv7l/wheel/./toil/lib/aws
2025-06-05T21:01:08,173   copying build/lib/toil/lib/aws/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/lib/aws
2025-06-05T21:01:08,175   copying build/lib/toil/lib/aws/session.py -> build/bdist.linux-armv7l/wheel/./toil/lib/aws
2025-06-05T21:01:08,178   copying build/lib/toil/lib/aws/utils.py -> build/bdist.linux-armv7l/wheel/./toil/lib/aws
2025-06-05T21:01:08,181   copying build/lib/toil/lib/aws/iam.py -> build/bdist.linux-armv7l/wheel/./toil/lib/aws
2025-06-05T21:01:08,184   copying build/lib/toil/lib/web.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,186   copying build/lib/toil/lib/iterables.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,188   copying build/lib/toil/lib/resources.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,190   copying build/lib/toil/lib/history_submission.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,193   copying build/lib/toil/lib/ec2.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,196   copying build/lib/toil/lib/throttle.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,198   copying build/lib/toil/lib/memoize.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,200   copying build/lib/toil/lib/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,202   copying build/lib/toil/lib/compatibility.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,204   copying build/lib/toil/lib/dockstore.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,206   copying build/lib/toil/lib/conversions.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,208   copying build/lib/toil/lib/objects.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,211   copying build/lib/toil/lib/io.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,213   copying build/lib/toil/lib/bioio.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,215   copying build/lib/toil/lib/ftp_utils.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,217   copying build/lib/toil/lib/exceptions.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,219   copying build/lib/toil/lib/expando.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,221   creating build/bdist.linux-armv7l/wheel/toil/lib/encryption
2025-06-05T21:01:08,222   copying build/lib/toil/lib/encryption/_dummy.py -> build/bdist.linux-armv7l/wheel/./toil/lib/encryption
2025-06-05T21:01:08,224   copying build/lib/toil/lib/encryption/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/lib/encryption
2025-06-05T21:01:08,226   copying build/lib/toil/lib/encryption/conftest.py -> build/bdist.linux-armv7l/wheel/./toil/lib/encryption
2025-06-05T21:01:08,228   copying build/lib/toil/lib/encryption/_nacl.py -> build/bdist.linux-armv7l/wheel/./toil/lib/encryption
2025-06-05T21:01:08,230   copying build/lib/toil/lib/generatedEC2Lists.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,236   copying build/lib/toil/lib/threading.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,239   copying build/lib/toil/lib/misc.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,241   copying build/lib/toil/lib/docker.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,244   copying build/lib/toil/lib/history.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,247   copying build/lib/toil/lib/humanize.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,249   copying build/lib/toil/lib/ec2nodes.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,251   copying build/lib/toil/lib/accelerators.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,254   copying build/lib/toil/lib/retry.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,256   copying build/lib/toil/lib/trs.py -> build/bdist.linux-armv7l/wheel/./toil/lib
2025-06-05T21:01:08,259   copying build/lib/toil/leader.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:08,262   copying build/lib/toil/resource.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:08,265   copying build/lib/toil/serviceManager.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:08,269   creating build/bdist.linux-armv7l/wheel/toil/cwl
2025-06-05T21:01:08,270   copying build/lib/toil/cwl/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/cwl
2025-06-05T21:01:08,272   copying build/lib/toil/cwl/conftest.py -> build/bdist.linux-armv7l/wheel/./toil/cwl
2025-06-05T21:01:08,274   copying build/lib/toil/cwl/utils.py -> build/bdist.linux-armv7l/wheel/./toil/cwl
2025-06-05T21:01:08,276   copying build/lib/toil/cwl/cwltoil.py -> build/bdist.linux-armv7l/wheel/./toil/cwl
2025-06-05T21:01:08,283   copying build/lib/toil/common.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:08,286   copying build/lib/toil/exceptions.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:08,288   copying build/lib/toil/deferred.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:08,291   creating build/bdist.linux-armv7l/wheel/toil/test
2025-06-05T21:01:08,293   creating build/bdist.linux-armv7l/wheel/toil/test/server
2025-06-05T21:01:08,294   copying build/lib/toil/test/server/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/server
2025-06-05T21:01:08,296   copying build/lib/toil/test/server/serverTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/server
2025-06-05T21:01:08,299   creating build/bdist.linux-armv7l/wheel/toil/test/cactus
2025-06-05T21:01:08,300   copying build/lib/toil/test/cactus/test_cactus_integration.py -> build/bdist.linux-armv7l/wheel/./toil/test/cactus
2025-06-05T21:01:08,302   copying build/lib/toil/test/cactus/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/cactus
2025-06-05T21:01:08,304   copying build/lib/toil/test/cactus/pestis.tar.gz -> build/bdist.linux-armv7l/wheel/./toil/test/cactus
2025-06-05T21:01:08,389   creating build/bdist.linux-armv7l/wheel/toil/test/options
2025-06-05T21:01:08,390   copying build/lib/toil/test/options/options.py -> build/bdist.linux-armv7l/wheel/./toil/test/options
2025-06-05T21:01:08,393   copying build/lib/toil/test/options/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/options
2025-06-05T21:01:08,395   creating build/bdist.linux-armv7l/wheel/toil/test/wdl
2025-06-05T21:01:08,397   creating build/bdist.linux-armv7l/wheel/toil/test/wdl/testfiles
2025-06-05T21:01:08,398   copying build/lib/toil/test/wdl/testfiles/drop_files_subworkflow.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,400   copying build/lib/toil/test/wdl/testfiles/random.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,402   copying build/lib/toil/test/wdl/testfiles/url_to_optional_file.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,404   copying build/lib/toil/test/wdl/testfiles/test_map.txt -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,406   copying build/lib/toil/test/wdl/testfiles/test_string.txt -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,408   copying build/lib/toil/test/wdl/testfiles/vocab.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,410   copying build/lib/toil/test/wdl/testfiles/test_int.txt -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,412   copying build/lib/toil/test/wdl/testfiles/drop_files.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,414   copying build/lib/toil/test/wdl/testfiles/test_float.txt -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,415   copying build/lib/toil/test/wdl/testfiles/string_file_coercion.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,417   copying build/lib/toil/test/wdl/testfiles/test_boolean.txt -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,419   copying build/lib/toil/test/wdl/testfiles/test_lines.txt -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,421   copying build/lib/toil/test/wdl/testfiles/not_enough_outputs.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,423   copying build/lib/toil/test/wdl/testfiles/vocab.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,425   copying build/lib/toil/test/wdl/testfiles/url_to_file.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,427   copying build/lib/toil/test/wdl/testfiles/wait.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,429   copying build/lib/toil/test/wdl/testfiles/empty.txt -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,431   copying build/lib/toil/test/wdl/testfiles/test.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,433   copying build/lib/toil/test/wdl/testfiles/croo.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,436   copying build/lib/toil/test/wdl/testfiles/string_file_coercion.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/testfiles
2025-06-05T21:01:08,440   creating build/bdist.linux-armv7l/wheel/toil/test/wdl/standard_library
2025-06-05T21:01:08,441   copying build/lib/toil/test/wdl/standard_library/sub_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,443   copying build/lib/toil/test/wdl/standard_library/read_map_as_output.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,445   copying build/lib/toil/test/wdl/standard_library/ceil_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,447   copying build/lib/toil/test/wdl/standard_library/read_lines.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,448   copying build/lib/toil/test/wdl/standard_library/write_json.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,450   copying build/lib/toil/test/wdl/standard_library/as_pairs_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,452   copying build/lib/toil/test/wdl/standard_library/flatten_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,454   copying build/lib/toil/test/wdl/standard_library/range_0.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,456   copying build/lib/toil/test/wdl/standard_library/read_float.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,458   copying build/lib/toil/test/wdl/standard_library/read_int.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,460   copying build/lib/toil/test/wdl/standard_library/write_lines.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,461   copying build/lib/toil/test/wdl/standard_library/collect_by_key_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,463   copying build/lib/toil/test/wdl/standard_library/size.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,465   copying build/lib/toil/test/wdl/standard_library/read_lines_as_output.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,467   copying build/lib/toil/test/wdl/standard_library/range_invalid.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,469   copying build/lib/toil/test/wdl/standard_library/keys.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,471   copying build/lib/toil/test/wdl/standard_library/length_as_input_with_map.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,472   copying build/lib/toil/test/wdl/standard_library/read_boolean_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,474   copying build/lib/toil/test/wdl/standard_library/write_tsv_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,476   copying build/lib/toil/test/wdl/standard_library/length.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,478   copying build/lib/toil/test/wdl/standard_library/write_tsv.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,480   copying build/lib/toil/test/wdl/standard_library/read_int_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,482   copying build/lib/toil/test/wdl/standard_library/as_map.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,484   copying build/lib/toil/test/wdl/standard_library/ceil.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,486   copying build/lib/toil/test/wdl/standard_library/floor_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,488   copying build/lib/toil/test/wdl/standard_library/range.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,490   copying build/lib/toil/test/wdl/standard_library/sub_as_input_with_file.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,492   copying build/lib/toil/test/wdl/standard_library/sub.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,495   copying build/lib/toil/test/wdl/standard_library/round_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,496   copying build/lib/toil/test/wdl/standard_library/read_json.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,498   copying build/lib/toil/test/wdl/standard_library/round.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,500   copying build/lib/toil/test/wdl/standard_library/size_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,502   copying build/lib/toil/test/wdl/standard_library/write_map.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,504   copying build/lib/toil/test/wdl/standard_library/size_as_output.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,506   copying build/lib/toil/test/wdl/standard_library/transpose.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,507   copying build/lib/toil/test/wdl/standard_library/as_pairs.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,509   copying build/lib/toil/test/wdl/standard_library/read_boolean.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,511   copying build/lib/toil/test/wdl/standard_library/round_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,513   copying build/lib/toil/test/wdl/standard_library/length_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,515   copying build/lib/toil/test/wdl/standard_library/range_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,517   copying build/lib/toil/test/wdl/standard_library/read_tsv_as_output.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,519   copying build/lib/toil/test/wdl/standard_library/read_map.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,521   copying build/lib/toil/test/wdl/standard_library/read_json_as_output.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,523   copying build/lib/toil/test/wdl/standard_library/zip_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,525   copying build/lib/toil/test/wdl/standard_library/as_map_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,526   copying build/lib/toil/test/wdl/standard_library/zip.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,528   copying build/lib/toil/test/wdl/standard_library/length_invalid.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,530   copying build/lib/toil/test/wdl/standard_library/stdout.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,532   copying build/lib/toil/test/wdl/standard_library/floor_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,534   copying build/lib/toil/test/wdl/standard_library/cross_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,536   copying build/lib/toil/test/wdl/standard_library/read_string.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,538   copying build/lib/toil/test/wdl/standard_library/cross.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,540   copying build/lib/toil/test/wdl/standard_library/floor.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,542   copying build/lib/toil/test/wdl/standard_library/collect_by_key.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,543   copying build/lib/toil/test/wdl/standard_library/transpose_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,545   copying build/lib/toil/test/wdl/standard_library/write_json_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,547   copying build/lib/toil/test/wdl/standard_library/read_string_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,549   copying build/lib/toil/test/wdl/standard_library/stderr.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,551   copying build/lib/toil/test/wdl/standard_library/ceil_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,553   copying build/lib/toil/test/wdl/standard_library/keys_as_input.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,554   copying build/lib/toil/test/wdl/standard_library/write_lines_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,556   copying build/lib/toil/test/wdl/standard_library/write_map_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,558   copying build/lib/toil/test/wdl/standard_library/read_float_as_command.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,560   copying build/lib/toil/test/wdl/standard_library/stderr_as_output.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,562   copying build/lib/toil/test/wdl/standard_library/flatten.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,564   copying build/lib/toil/test/wdl/standard_library/length_as_input_with_map.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,565   copying build/lib/toil/test/wdl/standard_library/stdout_as_output.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,567   copying build/lib/toil/test/wdl/standard_library/read_tsv.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/standard_library
2025-06-05T21:01:08,569   copying build/lib/toil/test/wdl/test.tsv -> build/bdist.linux-armv7l/wheel/./toil/test/wdl
2025-06-05T21:01:08,571   copying build/lib/toil/test/wdl/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/wdl
2025-06-05T21:01:08,573   copying build/lib/toil/test/wdl/test.csv -> build/bdist.linux-armv7l/wheel/./toil/test/wdl
2025-06-05T21:01:08,575   creating build/bdist.linux-armv7l/wheel/toil/test/wdl/miniwdl_self_test
2025-06-05T21:01:08,576   copying build/lib/toil/test/wdl/miniwdl_self_test/self_test.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/miniwdl_self_test
2025-06-05T21:01:08,578   copying build/lib/toil/test/wdl/miniwdl_self_test/inputs.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/miniwdl_self_test
2025-06-05T21:01:08,580   copying build/lib/toil/test/wdl/miniwdl_self_test/inputs-namespaced.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/miniwdl_self_test
2025-06-05T21:01:08,582   copying build/lib/toil/test/wdl/wdltoil_test.py -> build/bdist.linux-armv7l/wheel/./toil/test/wdl
2025-06-05T21:01:08,586   creating build/bdist.linux-armv7l/wheel/toil/test/wdl/wdl_specification
2025-06-05T21:01:08,587   copying build/lib/toil/test/wdl/wdl_specification/v1_spec.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/wdl_specification
2025-06-05T21:01:08,589   copying build/lib/toil/test/wdl/wdl_specification/type_pair_basic.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/wdl_specification
2025-06-05T21:01:08,591   copying build/lib/toil/test/wdl/wdl_specification/type_pair_with_files.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/wdl_specification
2025-06-05T21:01:08,593   copying build/lib/toil/test/wdl/wdl_specification/v1_spec_declaration.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/wdl_specification
2025-06-05T21:01:08,595   copying build/lib/toil/test/wdl/wdl_specification/type_pair.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/wdl_specification
2025-06-05T21:01:08,597   creating build/bdist.linux-armv7l/wheel/toil/test/wdl/md5sum
2025-06-05T21:01:08,598   copying build/lib/toil/test/wdl/md5sum/md5sum.1.0.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/md5sum
2025-06-05T21:01:08,601   copying build/lib/toil/test/wdl/md5sum/empty_file.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/md5sum
2025-06-05T21:01:08,603   copying build/lib/toil/test/wdl/md5sum/md5sum.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/md5sum
2025-06-05T21:01:08,604   copying build/lib/toil/test/wdl/md5sum/md5sum-gs.json -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/md5sum
2025-06-05T21:01:08,606   copying build/lib/toil/test/wdl/md5sum/md5sum.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/md5sum
2025-06-05T21:01:08,608   copying build/lib/toil/test/wdl/md5sum/md5sum.input -> build/bdist.linux-armv7l/wheel/./toil/test/wdl/md5sum
2025-06-05T21:01:08,610   copying build/lib/toil/test/wdl/lint_error.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/wdl
2025-06-05T21:01:08,612   copying build/lib/toil/test/wdl/wdltoil_test_kubernetes.py -> build/bdist.linux-armv7l/wheel/./toil/test/wdl
2025-06-05T21:01:08,615   creating build/bdist.linux-armv7l/wheel/toil/test/provisioners
2025-06-05T21:01:08,617   creating build/bdist.linux-armv7l/wheel/toil/test/provisioners/aws
2025-06-05T21:01:08,619   copying build/lib/toil/test/provisioners/aws/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/provisioners/aws
2025-06-05T21:01:08,621   copying build/lib/toil/test/provisioners/aws/awsProvisionerTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/provisioners/aws
2025-06-05T21:01:08,625   copying build/lib/toil/test/provisioners/clusterScalerTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/provisioners
2025-06-05T21:01:08,629   copying build/lib/toil/test/provisioners/gceProvisionerTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/provisioners
2025-06-05T21:01:08,632   copying build/lib/toil/test/provisioners/provisionerTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/provisioners
2025-06-05T21:01:08,635   copying build/lib/toil/test/provisioners/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/provisioners
2025-06-05T21:01:08,638   copying build/lib/toil/test/provisioners/restartScript.py -> build/bdist.linux-armv7l/wheel/./toil/test/provisioners
2025-06-05T21:01:08,640   copying build/lib/toil/test/provisioners/clusterTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/provisioners
2025-06-05T21:01:08,644   creating build/bdist.linux-armv7l/wheel/toil/test/mesos
2025-06-05T21:01:08,646   copying build/lib/toil/test/mesos/helloWorld.py -> build/bdist.linux-armv7l/wheel/./toil/test/mesos
2025-06-05T21:01:08,649   copying build/lib/toil/test/mesos/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/mesos
2025-06-05T21:01:08,652   copying build/lib/toil/test/mesos/stress.py -> build/bdist.linux-armv7l/wheel/./toil/test/mesos
2025-06-05T21:01:08,655   copying build/lib/toil/test/mesos/MesosDataStructuresTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/mesos
2025-06-05T21:01:08,658   creating build/bdist.linux-armv7l/wheel/toil/test/sort
2025-06-05T21:01:08,660   copying build/lib/toil/test/sort/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/sort
2025-06-05T21:01:08,663   copying build/lib/toil/test/sort/sort.py -> build/bdist.linux-armv7l/wheel/./toil/test/sort
2025-06-05T21:01:08,666   copying build/lib/toil/test/sort/sortTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/sort
2025-06-05T21:01:08,670   copying build/lib/toil/test/sort/restart_sort.py -> build/bdist.linux-armv7l/wheel/./toil/test/sort
2025-06-05T21:01:08,673   copying build/lib/toil/test/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test
2025-06-05T21:01:08,678   creating build/bdist.linux-armv7l/wheel/toil/test/docs
2025-06-05T21:01:08,679   copying build/lib/toil/test/docs/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs
2025-06-05T21:01:08,681   copying build/lib/toil/test/docs/scriptsTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs
2025-06-05T21:01:08,685   creating build/bdist.linux-armv7l/wheel/toil/test/docs/scripts
2025-06-05T21:01:08,687   copying build/lib/toil/test/docs/scripts/tutorial_invokeworkflow2.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,689   copying build/lib/toil/test/docs/scripts/tutorial_stats.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,692   copying build/lib/toil/test/docs/scripts/tutorial_managing2.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,695   copying build/lib/toil/test/docs/scripts/tutorial_arguments.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,697   copying build/lib/toil/test/docs/scripts/tutorial_promises.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,699   copying build/lib/toil/test/docs/scripts/tutorial_staging.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,702   copying build/lib/toil/test/docs/scripts/tutorial_debugging_works.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,704   copying build/lib/toil/test/docs/scripts/tutorial_services.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,707   copying build/lib/toil/test/docs/scripts/tutorial_encapsulation.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,710   creating build/bdist.linux-armv7l/wheel/toil/test/docs/scripts/stagingExampleFiles
2025-06-05T21:01:08,711   copying build/lib/toil/test/docs/scripts/stagingExampleFiles/out.txt -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts/stagingExampleFiles
2025-06-05T21:01:08,714   copying build/lib/toil/test/docs/scripts/stagingExampleFiles/in.txt -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts/stagingExampleFiles
2025-06-05T21:01:08,717   copying build/lib/toil/test/docs/scripts/tutorial_helloworld.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,719   copying build/lib/toil/test/docs/scripts/tutorial_promises2.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,721   copying build/lib/toil/test/docs/scripts/tutorial_docker.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,723   copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs3.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,725   copying build/lib/toil/test/docs/scripts/tutorial_requirements.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,727   copying build/lib/toil/test/docs/scripts/example_cachingbenchmark.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,729   copying build/lib/toil/test/docs/scripts/example_alwaysfail_with_files.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,731   copying build/lib/toil/test/docs/scripts/tutorial_quickstart.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,733   copying build/lib/toil/test/docs/scripts/tutorial_jobfunctions.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,735   copying build/lib/toil/test/docs/scripts/example_alwaysfail.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,737   copying build/lib/toil/test/docs/scripts/tutorial_invokeworkflow.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,739   copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs2.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,741   copying build/lib/toil/test/docs/scripts/tutorial_debugging.patch -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,743   copying build/lib/toil/test/docs/scripts/tutorial_managing.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,745   copying build/lib/toil/test/docs/scripts/tutorial_multiplejobs.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,747   copying build/lib/toil/test/docs/scripts/tutorial_debugging_hangs.wdl -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,749   copying build/lib/toil/test/docs/scripts/tutorial_dynamic.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,751   copying build/lib/toil/test/docs/scripts/tutorial_encapsulation2.py -> build/bdist.linux-armv7l/wheel/./toil/test/docs/scripts
2025-06-05T21:01:08,754   creating build/bdist.linux-armv7l/wheel/toil/test/utils
2025-06-05T21:01:08,755   copying build/lib/toil/test/utils/utilsTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/utils
2025-06-05T21:01:08,758   copying build/lib/toil/test/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/utils
2025-06-05T21:01:08,761   creating build/bdist.linux-armv7l/wheel/toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:08,762   copying build/lib/toil/test/utils/ABCWorkflowDebug/mkFile.py -> build/bdist.linux-armv7l/wheel/./toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:08,764   copying build/lib/toil/test/utils/ABCWorkflowDebug/B_file.txt -> build/bdist.linux-armv7l/wheel/./toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:08,766   copying build/lib/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py -> build/bdist.linux-armv7l/wheel/./toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:08,769   copying build/lib/toil/test/utils/ABCWorkflowDebug/sleep.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:08,771   copying build/lib/toil/test/utils/ABCWorkflowDebug/sleep.yaml -> build/bdist.linux-armv7l/wheel/./toil/test/utils/ABCWorkflowDebug
2025-06-05T21:01:08,772   copying build/lib/toil/test/utils/toilKillTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/utils
2025-06-05T21:01:08,775   copying build/lib/toil/test/utils/toilDebugTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/utils
2025-06-05T21:01:08,778   creating build/bdist.linux-armv7l/wheel/toil/test/jobStores
2025-06-05T21:01:08,779   copying build/lib/toil/test/jobStores/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/jobStores
2025-06-05T21:01:08,781   copying build/lib/toil/test/jobStores/jobStoreTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/jobStores
2025-06-05T21:01:08,785   creating build/bdist.linux-armv7l/wheel/toil/test/lib
2025-06-05T21:01:08,787   creating build/bdist.linux-armv7l/wheel/toil/test/lib/aws
2025-06-05T21:01:08,788   copying build/lib/toil/test/lib/aws/test_s3.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib/aws
2025-06-05T21:01:08,790   copying build/lib/toil/test/lib/aws/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib/aws
2025-06-05T21:01:08,792   copying build/lib/toil/test/lib/aws/test_utils.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib/aws
2025-06-05T21:01:08,794   copying build/lib/toil/test/lib/aws/test_iam.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib/aws
2025-06-05T21:01:08,796   copying build/lib/toil/test/lib/test_trs.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib
2025-06-05T21:01:08,799   copying build/lib/toil/test/lib/test_conversions.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib
2025-06-05T21:01:08,801   copying build/lib/toil/test/lib/dockerTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib
2025-06-05T21:01:08,804   copying build/lib/toil/test/lib/test_ec2.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib
2025-06-05T21:01:08,806   copying build/lib/toil/test/lib/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib
2025-06-05T21:01:08,808   copying build/lib/toil/test/lib/test_misc.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib
2025-06-05T21:01:08,810   copying build/lib/toil/test/lib/test_history.py -> build/bdist.linux-armv7l/wheel/./toil/test/lib
2025-06-05T21:01:08,813   creating build/bdist.linux-armv7l/wheel/toil/test/cwl
2025-06-05T21:01:08,815   copying build/lib/toil/test/cwl/download_subdirectory_file.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,816   copying build/lib/toil/test/cwl/not_run_required_input.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,818   copying build/lib/toil/test/cwl/seqtk_seq.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,820   copying build/lib/toil/test/cwl/revtool2.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,822   copying build/lib/toil/test/cwl/file_from_directory.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,824   copying build/lib/toil/test/cwl/conditional_wf.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,826   copying build/lib/toil/test/cwl/preemptible.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,827   copying build/lib/toil/test/cwl/glob_dir.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,829   copying build/lib/toil/test/cwl/directory_from_directory.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,831   copying build/lib/toil/test/cwl/stream.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,833   copying build/lib/toil/test/cwl/seqtk_seq_job.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,835   copying build/lib/toil/test/cwl/revsort-job.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,837   copying build/lib/toil/test/cwl/whale.txt -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,838   copying build/lib/toil/test/cwl/revsort-job-missing.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,840   copying build/lib/toil/test/cwl/test_filename_conflict_detection.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,842   copying build/lib/toil/test/cwl/2.fastq -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,844   copying build/lib/toil/test/cwl/test_filename_conflict_detection_at_root.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,846   copying build/lib/toil/test/cwl/optional-file.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,848   copying build/lib/toil/test/cwl/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,849   copying build/lib/toil/test/cwl/conditional_wf.yaml -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,851   copying build/lib/toil/test/cwl/cwlTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,856   copying build/lib/toil/test/cwl/revsort2.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,858   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,860   copying build/lib/toil/test/cwl/optional-file-missing.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,862   copying build/lib/toil/test/cwl/echo-stderr.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,863   copying build/lib/toil/test/cwl/optional-file-exists.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,865   copying build/lib/toil/test/cwl/echo.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,867   copying build/lib/toil/test/cwl/stream.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,869   copying build/lib/toil/test/cwl/preemptible_expression.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,871   copying build/lib/toil/test/cwl/scatter_duplicate_outputs.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,873   copying build/lib/toil/test/cwl/download_s3.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,874   copying build/lib/toil/test/cwl/colon_test_output.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,876   copying build/lib/toil/test/cwl/preemptible_expression.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,878   copying build/lib/toil/test/cwl/measure_default_memory.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,881   creating build/bdist.linux-armv7l/wheel/toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,882   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.f2 -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,884   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.info -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,886   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.dat -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,887   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.f0 -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,889   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.f4 -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,891   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.f3 -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,892   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.f4_TSM0 -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,894   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.f2_TSM0 -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,896   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.f3_TSM0 -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,897   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.f1i -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,899   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.f1 -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,901   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.lock -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,902   copying build/lib/toil/test/cwl/test_filename_conflict_resolution.ms/table.f5 -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/test_filename_conflict_resolution.ms
2025-06-05T21:01:08,904   copying build/lib/toil/test/cwl/s3_secondary_file.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,906   copying build/lib/toil/test/cwl/mpi_simple.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,908   copying build/lib/toil/test/cwl/download_file.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,910   copying build/lib/toil/test/cwl/download.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,912   copying build/lib/toil/test/cwl/echo-stdout-log-dir.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,914   copying build/lib/toil/test/cwl/conftest.py -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,916   copying build/lib/toil/test/cwl/download_directory_s3.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,918   copying build/lib/toil/test/cwl/echo_string_scatter_capture_stdout.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,919   copying build/lib/toil/test/cwl/revtool.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,921   copying build/lib/toil/test/cwl/download_http.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,923   copying build/lib/toil/test/cwl/sorttool.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,926   creating build/bdist.linux-armv7l/wheel/toil/test/cwl/mock_mpi
2025-06-05T21:01:08,927   copying build/lib/toil/test/cwl/mock_mpi/fake_mpi_run.py -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/mock_mpi
2025-06-05T21:01:08,929   copying build/lib/toil/test/cwl/mock_mpi/fake_mpi.yml -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/mock_mpi
2025-06-05T21:01:08,931   copying build/lib/toil/test/cwl/load_contents.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,933   copying build/lib/toil/test/cwl/echo_string.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,935   copying build/lib/toil/test/cwl/s3_secondary_file.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,937   copying build/lib/toil/test/cwl/download_directory_file.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,939   copying build/lib/toil/test/cwl/nvidia_smi.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,941   copying build/lib/toil/test/cwl/alwaysfails.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,943   copying build/lib/toil/test/cwl/2.fasta -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,945   copying build/lib/toil/test/cwl/download_https.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,947   copying build/lib/toil/test/cwl/download_directory.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,949   copying build/lib/toil/test/cwl/download_subdirectory.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,951   copying build/lib/toil/test/cwl/revsort.cwl -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,953   creating build/bdist.linux-armv7l/wheel/toil/test/cwl/directory
2025-06-05T21:01:08,955   creating build/bdist.linux-armv7l/wheel/toil/test/cwl/directory/directory
2025-06-05T21:01:08,956   copying build/lib/toil/test/cwl/directory/directory/file.txt -> build/bdist.linux-armv7l/wheel/./toil/test/cwl/directory/directory
2025-06-05T21:01:08,958   copying build/lib/toil/test/cwl/empty.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,960   copying build/lib/toil/test/cwl/colon_test_output_job.yaml -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,962   copying build/lib/toil/test/cwl/download_subdirectory_s3.json -> build/bdist.linux-armv7l/wheel/./toil/test/cwl
2025-06-05T21:01:08,964   copying build/lib/toil/test/conftest.py -> build/bdist.linux-armv7l/wheel/./toil/test
2025-06-05T21:01:08,967   creating build/bdist.linux-armv7l/wheel/toil/test/src
2025-06-05T21:01:08,968   copying build/lib/toil/test/src/systemTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,971   copying build/lib/toil/test/src/busTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,973   copying build/lib/toil/test/src/toilContextManagerTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,975   copying build/lib/toil/test/src/importExportFileTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,977   copying build/lib/toil/test/src/regularLogTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,980   copying build/lib/toil/test/src/jobFileStoreTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,982   copying build/lib/toil/test/src/autoDeploymentTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,985   copying build/lib/toil/test/src/environmentTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,987   copying build/lib/toil/test/src/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,989   copying build/lib/toil/test/src/jobServiceTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,991   copying build/lib/toil/test/src/restartDAGTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,994   copying build/lib/toil/test/src/realtimeLoggerTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,996   copying build/lib/toil/test/src/checkpointTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:08,998   copying build/lib/toil/test/src/resumabilityTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,001   copying build/lib/toil/test/src/resourceTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,003   copying build/lib/toil/test/src/helloWorldTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,005   copying build/lib/toil/test/src/promisedRequirementTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,007   copying build/lib/toil/test/src/deferredFunctionTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,010   copying build/lib/toil/test/src/userDefinedJobArgTypeTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,012   copying build/lib/toil/test/src/threadingTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,014   copying build/lib/toil/test/src/jobEncapsulationTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,016   copying build/lib/toil/test/src/jobTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,019   copying build/lib/toil/test/src/jobDescriptionTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,021   copying build/lib/toil/test/src/workerTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,024   copying build/lib/toil/test/src/miscTests.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,026   copying build/lib/toil/test/src/fileStoreTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,030   copying build/lib/toil/test/src/retainTempDirTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,032   copying build/lib/toil/test/src/dockerCheckTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,035   copying build/lib/toil/test/src/promisesTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/src
2025-06-05T21:01:09,037   creating build/bdist.linux-armv7l/wheel/toil/test/batchSystems
2025-06-05T21:01:09,038   copying build/lib/toil/test/batchSystems/test_lsf_helper.py -> build/bdist.linux-armv7l/wheel/./toil/test/batchSystems
2025-06-05T21:01:09,041   copying build/lib/toil/test/batchSystems/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/test/batchSystems
2025-06-05T21:01:09,043   copying build/lib/toil/test/batchSystems/test_slurm.py -> build/bdist.linux-armv7l/wheel/./toil/test/batchSystems
2025-06-05T21:01:09,046   copying build/lib/toil/test/batchSystems/batchSystemTest.py -> build/bdist.linux-armv7l/wheel/./toil/test/batchSystems
2025-06-05T21:01:09,049   copying build/lib/toil/test/batchSystems/batch_system_plugin_test.py -> build/bdist.linux-armv7l/wheel/./toil/test/batchSystems
2025-06-05T21:01:09,051   copying build/lib/toil/test/batchSystems/test_gridengine.py -> build/bdist.linux-armv7l/wheel/./toil/test/batchSystems
2025-06-05T21:01:09,054   creating build/bdist.linux-armv7l/wheel/toil/fileStores
2025-06-05T21:01:09,056   copying build/lib/toil/fileStores/abstractFileStore.py -> build/bdist.linux-armv7l/wheel/./toil/fileStores
2025-06-05T21:01:09,058   copying build/lib/toil/fileStores/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/fileStores
2025-06-05T21:01:09,060   copying build/lib/toil/fileStores/cachingFileStore.py -> build/bdist.linux-armv7l/wheel/./toil/fileStores
2025-06-05T21:01:09,064   copying build/lib/toil/fileStores/nonCachingFileStore.py -> build/bdist.linux-armv7l/wheel/./toil/fileStores
2025-06-05T21:01:09,067   copying build/lib/toil/realtimeLogger.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:09,069   copying build/lib/toil/bus.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:09,072   copying build/lib/toil/worker.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:09,075   copying build/lib/toil/statsAndLogging.py -> build/bdist.linux-armv7l/wheel/./toil
2025-06-05T21:01:09,079   creating build/bdist.linux-armv7l/wheel/toil/batchSystems
2025-06-05T21:01:09,080   copying build/lib/toil/batchSystems/local_support.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,082   copying build/lib/toil/batchSystems/gridengine.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,085   copying build/lib/toil/batchSystems/abstractBatchSystem.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,088   copying build/lib/toil/batchSystems/lsfHelper.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,090   copying build/lib/toil/batchSystems/abstractGridEngineBatchSystem.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,093   copying build/lib/toil/batchSystems/options.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,096   creating build/bdist.linux-armv7l/wheel/toil/batchSystems/mesos
2025-06-05T21:01:09,097   copying build/lib/toil/batchSystems/mesos/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems/mesos
2025-06-05T21:01:09,100   copying build/lib/toil/batchSystems/mesos/conftest.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems/mesos
2025-06-05T21:01:09,101   copying build/lib/toil/batchSystems/mesos/batchSystem.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems/mesos
2025-06-05T21:01:09,105   creating build/bdist.linux-armv7l/wheel/toil/batchSystems/mesos/test
2025-06-05T21:01:09,107   copying build/lib/toil/batchSystems/mesos/test/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems/mesos/test
2025-06-05T21:01:09,109   copying build/lib/toil/batchSystems/mesos/executor.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems/mesos
2025-06-05T21:01:09,112   copying build/lib/toil/batchSystems/__init__.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,114   copying build/lib/toil/batchSystems/contained_executor.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,116   copying build/lib/toil/batchSystems/htcondor.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,119   copying build/lib/toil/batchSystems/awsBatch.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,122   copying build/lib/toil/batchSystems/singleMachine.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,126   copying build/lib/toil/batchSystems/torque.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,128   copying build/lib/toil/batchSystems/cleanup_support.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,130   copying build/lib/toil/batchSystems/kubernetes.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,135   copying build/lib/toil/batchSystems/registry.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,138   copying build/lib/toil/batchSystems/lsf.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,141   copying build/lib/toil/batchSystems/slurm.py -> build/bdist.linux-armv7l/wheel/./toil/batchSystems
2025-06-05T21:01:09,144   running install_egg_info
2025-06-05T21:01:09,168   Copying src/toil.egg-info to build/bdist.linux-armv7l/wheel/./toil-8.2.0-py3.11.egg-info
2025-06-05T21:01:09,183   running install_scripts
2025-06-05T21:01:09,197   creating build/bdist.linux-armv7l/wheel/toil-8.2.0.dist-info/WHEEL
2025-06-05T21:01:09,200   creating '/tmp/pip-wheel-xqwcl8y_/.tmp-rutcvvhy/toil-8.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-06-05T21:01:09,204   adding 'toil/__init__.py'
2025-06-05T21:01:09,209   adding 'toil/bus.py'
2025-06-05T21:01:09,219   adding 'toil/common.py'
2025-06-05T21:01:09,223   adding 'toil/deferred.py'
2025-06-05T21:01:09,224   adding 'toil/exceptions.py'
2025-06-05T21:01:09,249   adding 'toil/job.py'
2025-06-05T21:01:09,261   adding 'toil/leader.py'
2025-06-05T21:01:09,263   adding 'toil/realtimeLogger.py'
2025-06-05T21:01:09,267   adding 'toil/resource.py'
2025-06-05T21:01:09,269   adding 'toil/serviceManager.py'
2025-06-05T21:01:09,272   adding 'toil/statsAndLogging.py'
2025-06-05T21:01:09,275   adding 'toil/toilState.py'
2025-06-05T21:01:09,276   adding 'toil/version.py'
2025-06-05T21:01:09,281   adding 'toil/worker.py'
2025-06-05T21:01:09,284   adding 'toil/batchSystems/__init__.py'
2025-06-05T21:01:09,288   adding 'toil/batchSystems/abstractBatchSystem.py'
2025-06-05T21:01:09,291   adding 'toil/batchSystems/abstractGridEngineBatchSystem.py'
2025-06-05T21:01:09,295   adding 'toil/batchSystems/awsBatch.py'
2025-06-05T21:01:09,296   adding 'toil/batchSystems/cleanup_support.py'
2025-06-05T21:01:09,298   adding 'toil/batchSystems/contained_executor.py'
2025-06-05T21:01:09,300   adding 'toil/batchSystems/gridengine.py'
2025-06-05T21:01:09,302   adding 'toil/batchSystems/htcondor.py'
2025-06-05T21:01:09,313   adding 'toil/batchSystems/kubernetes.py'
2025-06-05T21:01:09,315   adding 'toil/batchSystems/local_support.py'
2025-06-05T21:01:09,318   adding 'toil/batchSystems/lsf.py'
2025-06-05T21:01:09,320   adding 'toil/batchSystems/lsfHelper.py'
2025-06-05T21:01:09,322   adding 'toil/batchSystems/options.py'
2025-06-05T21:01:09,323   adding 'toil/batchSystems/registry.py'
2025-06-05T21:01:09,328   adding 'toil/batchSystems/singleMachine.py'
2025-06-05T21:01:09,334   adding 'toil/batchSystems/slurm.py'
2025-06-05T21:01:09,336   adding 'toil/batchSystems/torque.py'
2025-06-05T21:01:09,338   adding 'toil/batchSystems/mesos/__init__.py'
2025-06-05T21:01:09,343   adding 'toil/batchSystems/mesos/batchSystem.py'
2025-06-05T21:01:09,345   adding 'toil/batchSystems/mesos/conftest.py'
2025-06-05T21:01:09,347   adding 'toil/batchSystems/mesos/executor.py'
2025-06-05T21:01:09,349   adding 'toil/batchSystems/mesos/test/__init__.py'
2025-06-05T21:01:09,351   adding 'toil/cwl/__init__.py'
2025-06-05T21:01:09,352   adding 'toil/cwl/conftest.py'
2025-06-05T21:01:09,376   adding 'toil/cwl/cwltoil.py'
2025-06-05T21:01:09,378   adding 'toil/cwl/utils.py'
2025-06-05T21:01:09,381   adding 'toil/fileStores/__init__.py'
2025-06-05T21:01:09,385   adding 'toil/fileStores/abstractFileStore.py'
2025-06-05T21:01:09,397   adding 'toil/fileStores/cachingFileStore.py'
2025-06-05T21:01:09,400   adding 'toil/fileStores/nonCachingFileStore.py'
2025-06-05T21:01:09,402   adding 'toil/jobStores/__init__.py'
2025-06-05T21:01:09,411   adding 'toil/jobStores/abstractJobStore.py'
2025-06-05T21:01:09,412   adding 'toil/jobStores/conftest.py'
2025-06-05T21:01:09,419   adding 'toil/jobStores/fileJobStore.py'
2025-06-05T21:01:09,423   adding 'toil/jobStores/googleJobStore.py'
2025-06-05T21:01:09,425   adding 'toil/jobStores/utils.py'
2025-06-05T21:01:09,427   adding 'toil/jobStores/aws/__init__.py'
2025-06-05T21:01:09,436   adding 'toil/jobStores/aws/jobStore.py'
2025-06-05T21:01:09,440   adding 'toil/jobStores/aws/utils.py'
2025-06-05T21:01:09,442   adding 'toil/lib/__init__.py'
2025-06-05T21:01:09,444   adding 'toil/lib/accelerators.py'
2025-06-05T21:01:09,445   adding 'toil/lib/bioio.py'
2025-06-05T21:01:09,447   adding 'toil/lib/compatibility.py'
2025-06-05T21:01:09,448   adding 'toil/lib/conversions.py'
2025-06-05T21:01:09,451   adding 'toil/lib/docker.py'
2025-06-05T21:01:09,453   adding 'toil/lib/dockstore.py'
2025-06-05T21:01:09,456   adding 'toil/lib/ec2.py'
2025-06-05T21:01:09,458   adding 'toil/lib/ec2nodes.py'
2025-06-05T21:01:09,460   adding 'toil/lib/exceptions.py'
2025-06-05T21:01:09,461   adding 'toil/lib/expando.py'
2025-06-05T21:01:09,463   adding 'toil/lib/ftp_utils.py'
2025-06-05T21:01:09,474   adding 'toil/lib/generatedEC2Lists.py'
2025-06-05T21:01:09,480   adding 'toil/lib/history.py'
2025-06-05T21:01:09,484   adding 'toil/lib/history_submission.py'
2025-06-05T21:01:09,486   adding 'toil/lib/humanize.py'
2025-06-05T21:01:09,488   adding 'toil/lib/io.py'
2025-06-05T21:01:09,489   adding 'toil/lib/iterables.py'
2025-06-05T21:01:09,491   adding 'toil/lib/memoize.py'
2025-06-05T21:01:09,492   adding 'toil/lib/misc.py'
2025-06-05T21:01:09,494   adding 'toil/lib/objects.py'
2025-06-05T21:01:09,496   adding 'toil/lib/resources.py'
2025-06-05T21:01:09,499   adding 'toil/lib/retry.py'
2025-06-05T21:01:09,503   adding 'toil/lib/threading.py'
2025-06-05T21:01:09,504   adding 'toil/lib/throttle.py'
2025-06-05T21:01:09,507   adding 'toil/lib/trs.py'
2025-06-05T21:01:09,508   adding 'toil/lib/web.py'
2025-06-05T21:01:09,511   adding 'toil/lib/aws/__init__.py'
2025-06-05T21:01:09,513   adding 'toil/lib/aws/ami.py'
2025-06-05T21:01:09,515   adding 'toil/lib/aws/iam.py'
2025-06-05T21:01:09,516   adding 'toil/lib/aws/s3.py'
2025-06-05T21:01:09,518   adding 'toil/lib/aws/session.py'
2025-06-05T21:01:09,521   adding 'toil/lib/aws/utils.py'
2025-06-05T21:01:09,525   adding 'toil/lib/aws/utils.py.orig'
2025-06-05T21:01:09,526   adding 'toil/lib/encryption/__init__.py'
2025-06-05T21:01:09,528   adding 'toil/lib/encryption/_dummy.py'
2025-06-05T21:01:09,529   adding 'toil/lib/encryption/_nacl.py'
2025-06-05T21:01:09,530   adding 'toil/lib/encryption/conftest.py'
2025-06-05T21:01:09,532   adding 'toil/options/__init__.py'
2025-06-05T21:01:09,538   adding 'toil/options/common.py'
2025-06-05T21:01:09,540   adding 'toil/options/cwl.py'
2025-06-05T21:01:09,542   adding 'toil/options/runner.py'
2025-06-05T21:01:09,543   adding 'toil/options/wdl.py'
2025-06-05T21:01:09,547   adding 'toil/provisioners/__init__.py'
2025-06-05T21:01:09,554   adding 'toil/provisioners/abstractProvisioner.py'
2025-06-05T21:01:09,563   adding 'toil/provisioners/clusterScaler.py'
2025-06-05T21:01:09,566   adding 'toil/provisioners/gceProvisioner.py'
2025-06-05T21:01:09,569   adding 'toil/provisioners/node.py'
2025-06-05T21:01:09,571   adding 'toil/provisioners/aws/__init__.py'
2025-06-05T21:01:09,582   adding 'toil/provisioners/aws/awsProvisioner.py'
2025-06-05T21:01:09,585   adding 'toil/server/__init__.py'
2025-06-05T21:01:09,587   adding 'toil/server/app.py'
2025-06-05T21:01:09,589   adding 'toil/server/celery_app.py'
2025-06-05T21:01:09,592   adding 'toil/server/utils.py'
2025-06-05T21:01:09,594   adding 'toil/server/wsgi_app.py'
2025-06-05T21:01:09,596   adding 'toil/server/api_spec/LICENSE'
2025-06-05T21:01:09,598   adding 'toil/server/api_spec/README.rst'
2025-06-05T21:01:09,599   adding 'toil/server/api_spec/__init__.py'
2025-06-05T21:01:09,602   adding 'toil/server/api_spec/workflow_execution_service.swagger.yaml'
2025-06-05T21:01:09,604   adding 'toil/server/cli/__init__.py'
2025-06-05T21:01:09,607   adding 'toil/server/cli/wes_cwl_runner.py'
2025-06-05T21:01:09,609   adding 'toil/server/wes/__init__.py'
2025-06-05T21:01:09,611   adding 'toil/server/wes/abstract_backend.py'
2025-06-05T21:01:09,613   adding 'toil/server/wes/amazon_wes_utils.py'
2025-06-05T21:01:09,616   adding 'toil/server/wes/tasks.py'
2025-06-05T21:01:09,620   adding 'toil/server/wes/toil_backend.py'
2025-06-05T21:01:09,627   adding 'toil/test/__init__.py'
2025-06-05T21:01:09,628   adding 'toil/test/conftest.py'
2025-06-05T21:01:09,631   adding 'toil/test/batchSystems/__init__.py'
2025-06-05T21:01:09,638   adding 'toil/test/batchSystems/batchSystemTest.py'
2025-06-05T21:01:09,640   adding 'toil/test/batchSystems/batch_system_plugin_test.py'
2025-06-05T21:01:09,641   adding 'toil/test/batchSystems/test_gridengine.py'
2025-06-05T21:01:09,642   adding 'toil/test/batchSystems/test_lsf_helper.py'
2025-06-05T21:01:09,645   adding 'toil/test/batchSystems/test_slurm.py'
2025-06-05T21:01:09,647   adding 'toil/test/cactus/__init__.py'
2025-06-05T21:01:10,257   adding 'toil/test/cactus/pestis.tar.gz'
2025-06-05T21:01:10,294   adding 'toil/test/cactus/test_cactus_integration.py'
2025-06-05T21:01:10,297   adding 'toil/test/cwl/2.fasta'
2025-06-05T21:01:10,298   adding 'toil/test/cwl/2.fastq'
2025-06-05T21:01:10,299   adding 'toil/test/cwl/__init__.py'
2025-06-05T21:01:10,300   adding 'toil/test/cwl/alwaysfails.cwl'
2025-06-05T21:01:10,301   adding 'toil/test/cwl/colon_test_output.cwl'
2025-06-05T21:01:10,302   adding 'toil/test/cwl/colon_test_output_job.yaml'
2025-06-05T21:01:10,303   adding 'toil/test/cwl/conditional_wf.cwl'
2025-06-05T21:01:10,305   adding 'toil/test/cwl/conditional_wf.yaml'
2025-06-05T21:01:10,306   adding 'toil/test/cwl/conftest.py'
2025-06-05T21:01:10,312   adding 'toil/test/cwl/cwlTest.py'
2025-06-05T21:01:10,314   adding 'toil/test/cwl/directory_from_directory.cwl'
2025-06-05T21:01:10,315   adding 'toil/test/cwl/download.cwl'
2025-06-05T21:01:10,316   adding 'toil/test/cwl/download_directory.cwl'
2025-06-05T21:01:10,317   adding 'toil/test/cwl/download_directory_file.json'
2025-06-05T21:01:10,319   adding 'toil/test/cwl/download_directory_s3.json'
2025-06-05T21:01:10,320   adding 'toil/test/cwl/download_file.json'
2025-06-05T21:01:10,321   adding 'toil/test/cwl/download_http.json'
2025-06-05T21:01:10,322   adding 'toil/test/cwl/download_https.json'
2025-06-05T21:01:10,323   adding 'toil/test/cwl/download_s3.json'
2025-06-05T21:01:10,324   adding 'toil/test/cwl/download_subdirectory.cwl'
2025-06-05T21:01:10,325   adding 'toil/test/cwl/download_subdirectory_file.json'
2025-06-05T21:01:10,327   adding 'toil/test/cwl/download_subdirectory_s3.json'
2025-06-05T21:01:10,328   adding 'toil/test/cwl/echo-stderr.cwl'
2025-06-05T21:01:10,329   adding 'toil/test/cwl/echo-stdout-log-dir.cwl'
2025-06-05T21:01:10,330   adding 'toil/test/cwl/echo.cwl'
2025-06-05T21:01:10,331   adding 'toil/test/cwl/echo_string.cwl'
2025-06-05T21:01:10,333   adding 'toil/test/cwl/echo_string_scatter_capture_stdout.cwl'
2025-06-05T21:01:10,334   adding 'toil/test/cwl/empty.json'
2025-06-05T21:01:10,335   adding 'toil/test/cwl/file_from_directory.cwl'
2025-06-05T21:01:10,336   adding 'toil/test/cwl/glob_dir.cwl'
2025-06-05T21:01:10,337   adding 'toil/test/cwl/load_contents.cwl'
2025-06-05T21:01:10,339   adding 'toil/test/cwl/measure_default_memory.cwl'
2025-06-05T21:01:10,340   adding 'toil/test/cwl/mpi_simple.cwl'
2025-06-05T21:01:10,341   adding 'toil/test/cwl/not_run_required_input.cwl'
2025-06-05T21:01:10,342   adding 'toil/test/cwl/nvidia_smi.cwl'
2025-06-05T21:01:10,344   adding 'toil/test/cwl/optional-file-exists.json'
2025-06-05T21:01:10,345   adding 'toil/test/cwl/optional-file-missing.json'
2025-06-05T21:01:10,346   adding 'toil/test/cwl/optional-file.cwl'
2025-06-05T21:01:10,347   adding 'toil/test/cwl/preemptible.cwl'
2025-06-05T21:01:10,348   adding 'toil/test/cwl/preemptible_expression.cwl'
2025-06-05T21:01:10,350   adding 'toil/test/cwl/preemptible_expression.json'
2025-06-05T21:01:10,351   adding 'toil/test/cwl/revsort-job-missing.json'
2025-06-05T21:01:10,352   adding 'toil/test/cwl/revsort-job.json'
2025-06-05T21:01:10,353   adding 'toil/test/cwl/revsort.cwl'
2025-06-05T21:01:10,355   adding 'toil/test/cwl/revsort2.cwl'
2025-06-05T21:01:10,356   adding 'toil/test/cwl/revtool.cwl'
2025-06-05T21:01:10,357   adding 'toil/test/cwl/revtool2.cwl'
2025-06-05T21:01:10,358   adding 'toil/test/cwl/s3_secondary_file.cwl'
2025-06-05T21:01:10,360   adding 'toil/test/cwl/s3_secondary_file.json'
2025-06-05T21:01:10,361   adding 'toil/test/cwl/scatter_duplicate_outputs.cwl'
2025-06-05T21:01:10,362   adding 'toil/test/cwl/seqtk_seq.cwl'
2025-06-05T21:01:10,363   adding 'toil/test/cwl/seqtk_seq_job.json'
2025-06-05T21:01:10,365   adding 'toil/test/cwl/sorttool.cwl'
2025-06-05T21:01:10,366   adding 'toil/test/cwl/stream.cwl'
2025-06-05T21:01:10,367   adding 'toil/test/cwl/stream.json'
2025-06-05T21:01:10,368   adding 'toil/test/cwl/test_filename_conflict_detection.cwl'
2025-06-05T21:01:10,370   adding 'toil/test/cwl/test_filename_conflict_detection_at_root.cwl'
2025-06-05T21:01:10,371   adding 'toil/test/cwl/test_filename_conflict_resolution.cwl'
2025-06-05T21:01:10,372   adding 'toil/test/cwl/whale.txt'
2025-06-05T21:01:10,374   adding 'toil/test/cwl/directory/directory/file.txt'
2025-06-05T21:01:10,376   adding 'toil/test/cwl/mock_mpi/fake_mpi.yml'
2025-06-05T21:01:10,377   adding 'toil/test/cwl/mock_mpi/fake_mpi_run.py'
2025-06-05T21:01:10,379   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.dat'
2025-06-05T21:01:10,380   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.f0'
2025-06-05T21:01:10,381   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.f1'
2025-06-05T21:01:10,382   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.f1i'
2025-06-05T21:01:10,383   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.f2'
2025-06-05T21:01:10,384   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.f2_TSM0'
2025-06-05T21:01:10,385   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.f3'
2025-06-05T21:01:10,386   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.f3_TSM0'
2025-06-05T21:01:10,387   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.f4'
2025-06-05T21:01:10,388   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.f4_TSM0'
2025-06-05T21:01:10,389   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.f5'
2025-06-05T21:01:10,390   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.info'
2025-06-05T21:01:10,391   adding 'toil/test/cwl/test_filename_conflict_resolution.ms/table.lock'
2025-06-05T21:01:10,393   adding 'toil/test/docs/__init__.py'
2025-06-05T21:01:10,394   adding 'toil/test/docs/scriptsTest.py'
2025-06-05T21:01:10,397   adding 'toil/test/docs/scripts/example_alwaysfail.py'
2025-06-05T21:01:10,398   adding 'toil/test/docs/scripts/example_alwaysfail_with_files.wdl'
2025-06-05T21:01:10,400   adding 'toil/test/docs/scripts/example_cachingbenchmark.py'
2025-06-05T21:01:10,401   adding 'toil/test/docs/scripts/tutorial_arguments.py'
2025-06-05T21:01:10,402   adding 'toil/test/docs/scripts/tutorial_debugging.patch'
2025-06-05T21:01:10,403   adding 'toil/test/docs/scripts/tutorial_debugging_hangs.wdl'
2025-06-05T21:01:10,405   adding 'toil/test/docs/scripts/tutorial_debugging_works.wdl'
2025-06-05T21:01:10,406   adding 'toil/test/docs/scripts/tutorial_docker.py'
2025-06-05T21:01:10,407   adding 'toil/test/docs/scripts/tutorial_dynamic.py'
2025-06-05T21:01:10,409   adding 'toil/test/docs/scripts/tutorial_encapsulation.py'
2025-06-05T21:01:10,410   adding 'toil/test/docs/scripts/tutorial_encapsulation2.py'
2025-06-05T21:01:10,411   adding 'toil/test/docs/scripts/tutorial_helloworld.py'
2025-06-05T21:01:10,412   adding 'toil/test/docs/scripts/tutorial_invokeworkflow.py'
2025-06-05T21:01:10,413   adding 'toil/test/docs/scripts/tutorial_invokeworkflow2.py'
2025-06-05T21:01:10,415   adding 'toil/test/docs/scripts/tutorial_jobfunctions.py'
2025-06-05T21:01:10,416   adding 'toil/test/docs/scripts/tutorial_managing.py'
2025-06-05T21:01:10,417   adding 'toil/test/docs/scripts/tutorial_managing2.py'
2025-06-05T21:01:10,419   adding 'toil/test/docs/scripts/tutorial_multiplejobs.py'
2025-06-05T21:01:10,420   adding 'toil/test/docs/scripts/tutorial_multiplejobs2.py'
2025-06-05T21:01:10,421   adding 'toil/test/docs/scripts/tutorial_multiplejobs3.py'
2025-06-05T21:01:10,422   adding 'toil/test/docs/scripts/tutorial_promises.py'
2025-06-05T21:01:10,424   adding 'toil/test/docs/scripts/tutorial_promises2.py'
2025-06-05T21:01:10,425   adding 'toil/test/docs/scripts/tutorial_quickstart.py'
2025-06-05T21:01:10,426   adding 'toil/test/docs/scripts/tutorial_requirements.py'
2025-06-05T21:01:10,428   adding 'toil/test/docs/scripts/tutorial_services.py'
2025-06-05T21:01:10,429   adding 'toil/test/docs/scripts/tutorial_staging.py'
2025-06-05T21:01:10,430   adding 'toil/test/docs/scripts/tutorial_stats.py'
2025-06-05T21:01:10,432   adding 'toil/test/docs/scripts/stagingExampleFiles/in.txt'
2025-06-05T21:01:10,433   adding 'toil/test/docs/scripts/stagingExampleFiles/out.txt'
2025-06-05T21:01:10,435   adding 'toil/test/jobStores/__init__.py'
2025-06-05T21:01:10,442   adding 'toil/test/jobStores/jobStoreTest.py'
2025-06-05T21:01:10,445   adding 'toil/test/lib/__init__.py'
2025-06-05T21:01:10,447   adding 'toil/test/lib/dockerTest.py'
2025-06-05T21:01:10,448   adding 'toil/test/lib/test_conversions.py'
2025-06-05T21:01:10,450   adding 'toil/test/lib/test_ec2.py'
2025-06-05T21:01:10,452   adding 'toil/test/lib/test_history.py'
2025-06-05T21:01:10,453   adding 'toil/test/lib/test_misc.py'
2025-06-05T21:01:10,455   adding 'toil/test/lib/test_trs.py'
2025-06-05T21:01:10,456   adding 'toil/test/lib/aws/__init__.py'
2025-06-05T21:01:10,458   adding 'toil/test/lib/aws/test_iam.py'
2025-06-05T21:01:10,459   adding 'toil/test/lib/aws/test_s3.py'
2025-06-05T21:01:10,461   adding 'toil/test/lib/aws/test_utils.py'
2025-06-05T21:01:10,463   adding 'toil/test/mesos/MesosDataStructuresTest.py'
2025-06-05T21:01:10,464   adding 'toil/test/mesos/__init__.py'
2025-06-05T21:01:10,465   adding 'toil/test/mesos/helloWorld.py'
2025-06-05T21:01:10,467   adding 'toil/test/mesos/stress.py'
2025-06-05T21:01:10,469   adding 'toil/test/options/__init__.py'
2025-06-05T21:01:10,470   adding 'toil/test/options/options.py'
2025-06-05T21:01:10,472   adding 'toil/test/provisioners/__init__.py'
2025-06-05T21:01:10,477   adding 'toil/test/provisioners/clusterScalerTest.py'
2025-06-05T21:01:10,479   adding 'toil/test/provisioners/clusterTest.py'
2025-06-05T21:01:10,481   adding 'toil/test/provisioners/gceProvisionerTest.py'
2025-06-05T21:01:10,482   adding 'toil/test/provisioners/provisionerTest.py'
2025-06-05T21:01:10,484   adding 'toil/test/provisioners/restartScript.py'
2025-06-05T21:01:10,486   adding 'toil/test/provisioners/aws/__init__.py'
2025-06-05T21:01:10,488   adding 'toil/test/provisioners/aws/awsProvisionerTest.py'
2025-06-05T21:01:10,491   adding 'toil/test/server/__init__.py'
2025-06-05T21:01:10,494   adding 'toil/test/server/serverTest.py'
2025-06-05T21:01:10,496   adding 'toil/test/sort/__init__.py'
2025-06-05T21:01:10,498   adding 'toil/test/sort/restart_sort.py'
2025-06-05T21:01:10,500   adding 'toil/test/sort/sort.py'
2025-06-05T21:01:10,502   adding 'toil/test/sort/sortTest.py'
2025-06-05T21:01:10,504   adding 'toil/test/src/__init__.py'
2025-06-05T21:01:10,507   adding 'toil/test/src/autoDeploymentTest.py'
2025-06-05T21:01:10,509   adding 'toil/test/src/busTest.py'
2025-06-05T21:01:10,510   adding 'toil/test/src/checkpointTest.py'
2025-06-05T21:01:10,513   adding 'toil/test/src/deferredFunctionTest.py'
2025-06-05T21:01:10,514   adding 'toil/test/src/dockerCheckTest.py'
2025-06-05T21:01:10,516   adding 'toil/test/src/environmentTest.py'
2025-06-05T21:01:10,524   adding 'toil/test/src/fileStoreTest.py'
2025-06-05T21:01:10,526   adding 'toil/test/src/helloWorldTest.py'
2025-06-05T21:01:10,528   adding 'toil/test/src/importExportFileTest.py'
2025-06-05T21:01:10,529   adding 'toil/test/src/jobDescriptionTest.py'
2025-06-05T21:01:10,531   adding 'toil/test/src/jobEncapsulationTest.py'
2025-06-05T21:01:10,533   adding 'toil/test/src/jobFileStoreTest.py'
2025-06-05T21:01:10,535   adding 'toil/test/src/jobServiceTest.py'
2025-06-05T21:01:10,539   adding 'toil/test/src/jobTest.py'
2025-06-05T21:01:10,541   adding 'toil/test/src/miscTests.py'
2025-06-05T21:01:10,543   adding 'toil/test/src/promisedRequirementTest.py'
2025-06-05T21:01:10,545   adding 'toil/test/src/promisesTest.py'
2025-06-05T21:01:10,546   adding 'toil/test/src/realtimeLoggerTest.py'
2025-06-05T21:01:10,548   adding 'toil/test/src/regularLogTest.py'
2025-06-05T21:01:10,550   adding 'toil/test/src/resourceTest.py'
2025-06-05T21:01:10,552   adding 'toil/test/src/restartDAGTest.py'
2025-06-05T21:01:10,554   adding 'toil/test/src/resumabilityTest.py'
2025-06-05T21:01:10,555   adding 'toil/test/src/retainTempDirTest.py'
2025-06-05T21:01:10,557   adding 'toil/test/src/systemTest.py'
2025-06-05T21:01:10,558   adding 'toil/test/src/threadingTest.py'
2025-06-05T21:01:10,560   adding 'toil/test/src/toilContextManagerTest.py'
2025-06-05T21:01:10,561   adding 'toil/test/src/userDefinedJobArgTypeTest.py'
2025-06-05T21:01:10,563   adding 'toil/test/src/workerTest.py'
2025-06-05T21:01:10,565   adding 'toil/test/utils/__init__.py'
2025-06-05T21:01:10,567   adding 'toil/test/utils/toilDebugTest.py'
2025-06-05T21:01:10,568   adding 'toil/test/utils/toilKillTest.py'
2025-06-05T21:01:10,571   adding 'toil/test/utils/utilsTest.py'
2025-06-05T21:01:10,573   adding 'toil/test/utils/ABCWorkflowDebug/B_file.txt'
2025-06-05T21:01:10,575   adding 'toil/test/utils/ABCWorkflowDebug/debugWorkflow.py'
2025-06-05T21:01:10,576   adding 'toil/test/utils/ABCWorkflowDebug/mkFile.py'
2025-06-05T21:01:10,577   adding 'toil/test/utils/ABCWorkflowDebug/sleep.cwl'
2025-06-05T21:01:10,578   adding 'toil/test/utils/ABCWorkflowDebug/sleep.yaml'
2025-06-05T21:01:10,580   adding 'toil/test/wdl/__init__.py'
2025-06-05T21:01:10,581   adding 'toil/test/wdl/lint_error.wdl'
2025-06-05T21:01:10,582   adding 'toil/test/wdl/test.csv'
2025-06-05T21:01:10,583   adding 'toil/test/wdl/test.tsv'
2025-06-05T21:01:10,587   adding 'toil/test/wdl/wdltoil_test.py'
2025-06-05T21:01:10,589   adding 'toil/test/wdl/wdltoil_test_kubernetes.py'
2025-06-05T21:01:10,591   adding 'toil/test/wdl/md5sum/empty_file.json'
2025-06-05T21:01:10,592   adding 'toil/test/wdl/md5sum/md5sum-gs.json'
2025-06-05T21:01:10,593   adding 'toil/test/wdl/md5sum/md5sum.1.0.wdl'
2025-06-05T21:01:10,595   adding 'toil/test/wdl/md5sum/md5sum.input'
2025-06-05T21:01:10,596   adding 'toil/test/wdl/md5sum/md5sum.json'
2025-06-05T21:01:10,597   adding 'toil/test/wdl/md5sum/md5sum.wdl'
2025-06-05T21:01:10,599   adding 'toil/test/wdl/miniwdl_self_test/inputs-namespaced.json'
2025-06-05T21:01:10,600   adding 'toil/test/wdl/miniwdl_self_test/inputs.json'
2025-06-05T21:01:10,601   adding 'toil/test/wdl/miniwdl_self_test/self_test.wdl'
2025-06-05T21:01:10,604   adding 'toil/test/wdl/standard_library/as_map.json'
2025-06-05T21:01:10,605   adding 'toil/test/wdl/standard_library/as_map_as_input.wdl'
2025-06-05T21:01:10,607   adding 'toil/test/wdl/standard_library/as_pairs.json'
2025-06-05T21:01:10,608   adding 'toil/test/wdl/standard_library/as_pairs_as_input.wdl'
2025-06-05T21:01:10,609   adding 'toil/test/wdl/standard_library/ceil.json'
2025-06-05T21:01:10,610   adding 'toil/test/wdl/standard_library/ceil_as_command.wdl'
2025-06-05T21:01:10,611   adding 'toil/test/wdl/standard_library/ceil_as_input.wdl'
2025-06-05T21:01:10,612   adding 'toil/test/wdl/standard_library/collect_by_key.json'
2025-06-05T21:01:10,614   adding 'toil/test/wdl/standard_library/collect_by_key_as_input.wdl'
2025-06-05T21:01:10,615   adding 'toil/test/wdl/standard_library/cross.json'
2025-06-05T21:01:10,616   adding 'toil/test/wdl/standard_library/cross_as_input.wdl'
2025-06-05T21:01:10,617   adding 'toil/test/wdl/standard_library/flatten.json'
2025-06-05T21:01:10,618   adding 'toil/test/wdl/standard_library/flatten_as_input.wdl'
2025-06-05T21:01:10,620   adding 'toil/test/wdl/standard_library/floor.json'
2025-06-05T21:01:10,621   adding 'toil/test/wdl/standard_library/floor_as_command.wdl'
2025-06-05T21:01:10,622   adding 'toil/test/wdl/standard_library/floor_as_input.wdl'
2025-06-05T21:01:10,623   adding 'toil/test/wdl/standard_library/keys.json'
2025-06-05T21:01:10,624   adding 'toil/test/wdl/standard_library/keys_as_input.wdl'
2025-06-05T21:01:10,625   adding 'toil/test/wdl/standard_library/length.json'
2025-06-05T21:01:10,627   adding 'toil/test/wdl/standard_library/length_as_input.wdl'
2025-06-05T21:01:10,628   adding 'toil/test/wdl/standard_library/length_as_input_with_map.json'
2025-06-05T21:01:10,629   adding 'toil/test/wdl/standard_library/length_as_input_with_map.wdl'
2025-06-05T21:01:10,630   adding 'toil/test/wdl/standard_library/length_invalid.json'
2025-06-05T21:01:10,631   adding 'toil/test/wdl/standard_library/range.json'
2025-06-05T21:01:10,633   adding 'toil/test/wdl/standard_library/range_0.json'
2025-06-05T21:01:10,634   adding 'toil/test/wdl/standard_library/range_as_input.wdl'
2025-06-05T21:01:10,635   adding 'toil/test/wdl/standard_library/range_invalid.json'
2025-06-05T21:01:10,636   adding 'toil/test/wdl/standard_library/read_boolean.json'
2025-06-05T21:01:10,637   adding 'toil/test/wdl/standard_library/read_boolean_as_command.wdl'
2025-06-05T21:01:10,638   adding 'toil/test/wdl/standard_library/read_float.json'
2025-06-05T21:01:10,640   adding 'toil/test/wdl/standard_library/read_float_as_command.wdl'
2025-06-05T21:01:10,641   adding 'toil/test/wdl/standard_library/read_int.json'
2025-06-05T21:01:10,642   adding 'toil/test/wdl/standard_library/read_int_as_command.wdl'
2025-06-05T21:01:10,643   adding 'toil/test/wdl/standard_library/read_json.json'
2025-06-05T21:01:10,644   adding 'toil/test/wdl/standard_library/read_json_as_output.wdl'
2025-06-05T21:01:10,646   adding 'toil/test/wdl/standard_library/read_lines.json'
2025-06-05T21:01:10,647   adding 'toil/test/wdl/standard_library/read_lines_as_output.wdl'
2025-06-05T21:01:10,648   adding 'toil/test/wdl/standard_library/read_map.json'
2025-06-05T21:01:10,649   adding 'toil/test/wdl/standard_library/read_map_as_output.wdl'
2025-06-05T21:01:10,651   adding 'toil/test/wdl/standard_library/read_string.json'
2025-06-05T21:01:10,652   adding 'toil/test/wdl/standard_library/read_string_as_command.wdl'
2025-06-05T21:01:10,653   adding 'toil/test/wdl/standard_library/read_tsv.json'
2025-06-05T21:01:10,654   adding 'toil/test/wdl/standard_library/read_tsv_as_output.wdl'
2025-06-05T21:01:10,655   adding 'toil/test/wdl/standard_library/round.json'
2025-06-05T21:01:10,657   adding 'toil/test/wdl/standard_library/round_as_command.wdl'
2025-06-05T21:01:10,658   adding 'toil/test/wdl/standard_library/round_as_input.wdl'
2025-06-05T21:01:10,659   adding 'toil/test/wdl/standard_library/size.json'
2025-06-05T21:01:10,660   adding 'toil/test/wdl/standard_library/size_as_command.wdl'
2025-06-05T21:01:10,661   adding 'toil/test/wdl/standard_library/size_as_output.wdl'
2025-06-05T21:01:10,663   adding 'toil/test/wdl/standard_library/stderr.json'
2025-06-05T21:01:10,664   adding 'toil/test/wdl/standard_library/stderr_as_output.wdl'
2025-06-05T21:01:10,665   adding 'toil/test/wdl/standard_library/stdout.json'
2025-06-05T21:01:10,666   adding 'toil/test/wdl/standard_library/stdout_as_output.wdl'
2025-06-05T21:01:10,667   adding 'toil/test/wdl/standard_library/sub.json'
2025-06-05T21:01:10,669   adding 'toil/test/wdl/standard_library/sub_as_input.wdl'
2025-06-05T21:01:10,670   adding 'toil/test/wdl/standard_library/sub_as_input_with_file.wdl'
2025-06-05T21:01:10,671   adding 'toil/test/wdl/standard_library/transpose.json'
2025-06-05T21:01:10,673   adding 'toil/test/wdl/standard_library/transpose_as_input.wdl'
2025-06-05T21:01:10,674   adding 'toil/test/wdl/standard_library/write_json.json'
2025-06-05T21:01:10,675   adding 'toil/test/wdl/standard_library/write_json_as_command.wdl'
2025-06-05T21:01:10,676   adding 'toil/test/wdl/standard_library/write_lines.json'
2025-06-05T21:01:10,678   adding 'toil/test/wdl/standard_library/write_lines_as_command.wdl'
2025-06-05T21:01:10,679   adding 'toil/test/wdl/standard_library/write_map.json'
2025-06-05T21:01:10,681   adding 'toil/test/wdl/standard_library/write_map_as_command.wdl'
2025-06-05T21:01:10,682   adding 'toil/test/wdl/standard_library/write_tsv.json'
2025-06-05T21:01:10,683   adding 'toil/test/wdl/standard_library/write_tsv_as_command.wdl'
2025-06-05T21:01:10,684   adding 'toil/test/wdl/standard_library/zip.json'
2025-06-05T21:01:10,686   adding 'toil/test/wdl/standard_library/zip_as_input.wdl'
2025-06-05T21:01:10,688   adding 'toil/test/wdl/testfiles/croo.wdl'
2025-06-05T21:01:10,689   adding 'toil/test/wdl/testfiles/drop_files.wdl'
2025-06-05T21:01:10,690   adding 'toil/test/wdl/testfiles/drop_files_subworkflow.wdl'
2025-06-05T21:01:10,692   adding 'toil/test/wdl/testfiles/empty.txt'
2025-06-05T21:01:10,693   adding 'toil/test/wdl/testfiles/not_enough_outputs.wdl'
2025-06-05T21:01:10,694   adding 'toil/test/wdl/testfiles/random.wdl'
2025-06-05T21:01:10,695   adding 'toil/test/wdl/testfiles/string_file_coercion.json'
2025-06-05T21:01:10,696   adding 'toil/test/wdl/testfiles/string_file_coercion.wdl'
2025-06-05T21:01:10,697   adding 'toil/test/wdl/testfiles/test.json'
2025-06-05T21:01:10,698   adding 'toil/test/wdl/testfiles/test_boolean.txt'
2025-06-05T21:01:10,699   adding 'toil/test/wdl/testfiles/test_float.txt'
2025-06-05T21:01:10,700   adding 'toil/test/wdl/testfiles/test_int.txt'
2025-06-05T21:01:10,701   adding 'toil/test/wdl/testfiles/test_lines.txt'
2025-06-05T21:01:10,702   adding 'toil/test/wdl/testfiles/test_map.txt'
2025-06-05T21:01:10,704   adding 'toil/test/wdl/testfiles/test_string.txt'
2025-06-05T21:01:10,705   adding 'toil/test/wdl/testfiles/url_to_file.wdl'
2025-06-05T21:01:10,706   adding 'toil/test/wdl/testfiles/url_to_optional_file.wdl'
2025-06-05T21:01:10,707   adding 'toil/test/wdl/testfiles/vocab.json'
2025-06-05T21:01:10,708   adding 'toil/test/wdl/testfiles/vocab.wdl'
2025-06-05T21:01:10,710   adding 'toil/test/wdl/testfiles/wait.wdl'
2025-06-05T21:01:10,711   adding 'toil/test/wdl/wdl_specification/type_pair.json'
2025-06-05T21:01:10,713   adding 'toil/test/wdl/wdl_specification/type_pair_basic.wdl'
2025-06-05T21:01:10,714   adding 'toil/test/wdl/wdl_specification/type_pair_with_files.wdl'
2025-06-05T21:01:10,715   adding 'toil/test/wdl/wdl_specification/v1_spec.json'
2025-06-05T21:01:10,716   adding 'toil/test/wdl/wdl_specification/v1_spec_declaration.wdl'
2025-06-05T21:01:10,718   adding 'toil/utils/__init__.py'
2025-06-05T21:01:10,719   adding 'toil/utils/toilClean.py'
2025-06-05T21:01:10,721   adding 'toil/utils/toilConfig.py'
2025-06-05T21:01:10,722   adding 'toil/utils/toilDebugFile.py'
2025-06-05T21:01:10,724   adding 'toil/utils/toilDebugJob.py'
2025-06-05T21:01:10,726   adding 'toil/utils/toilDestroyCluster.py'
2025-06-05T21:01:10,727   adding 'toil/utils/toilKill.py'
2025-06-05T21:01:10,729   adding 'toil/utils/toilLaunchCluster.py'
2025-06-05T21:01:10,731   adding 'toil/utils/toilMain.py'
2025-06-05T21:01:10,732   adding 'toil/utils/toilRsyncCluster.py'
2025-06-05T21:01:10,733   adding 'toil/utils/toilServer.py'
2025-06-05T21:01:10,735   adding 'toil/utils/toilSshCluster.py'
2025-06-05T21:01:10,738   adding 'toil/utils/toilStats.py'
2025-06-05T21:01:10,741   adding 'toil/utils/toilStatus.py'
2025-06-05T21:01:10,743   adding 'toil/utils/toilUpdateEC2Instances.py'
2025-06-05T21:01:10,745   adding 'toil/wdl/__init__.py'
2025-06-05T21:01:10,747   adding 'toil/wdl/utils.py'
2025-06-05T21:01:10,780   adding 'toil/wdl/wdltoil.py'
2025-06-05T21:01:10,786   adding 'toil-8.2.0.dist-info/licenses/LICENSE'
2025-06-05T21:01:10,789   adding 'toil-8.2.0.dist-info/METADATA'
2025-06-05T21:01:10,790   adding 'toil-8.2.0.dist-info/WHEEL'
2025-06-05T21:01:10,791   adding 'toil-8.2.0.dist-info/entry_points.txt'
2025-06-05T21:01:10,792   adding 'toil-8.2.0.dist-info/top_level.txt'
2025-06-05T21:01:10,799   adding 'toil-8.2.0.dist-info/RECORD'
2025-06-05T21:01:10,876   removing build/bdist.linux-armv7l/wheel
2025-06-05T21:01:11,075   Building wheel for toil (pyproject.toml): finished with status 'done'
2025-06-05T21:01:11,207   Created wheel for toil: filename=toil-8.2.0-py3-none-any.whl size=6908934 sha256=e90d1f3321be17638736f886db75201cff6c5bc6dea6523a89ec9712c2ffa4fd
2025-06-05T21:01:11,208   Stored in directory: /tmp/pip-ephem-wheel-cache-v79jhyoq/wheels/6f/21/2a/42ec78331f21bb26444d661fb164b33238ab43d39aa8690474
2025-06-05T21:01:11,238 Successfully built toil
2025-06-05T21:01:11,403 Removed build tracker: '/tmp/pip-build-tracker-tduyq7na'