2025-06-06T21:27:38,058 Created temporary directory: /tmp/pip-build-tracker-qqdxrbjy 2025-06-06T21:27:38,059 Initialized build tracking at /tmp/pip-build-tracker-qqdxrbjy 2025-06-06T21:27:38,060 Created build tracker: /tmp/pip-build-tracker-qqdxrbjy 2025-06-06T21:27:38,060 Entered build tracker: /tmp/pip-build-tracker-qqdxrbjy 2025-06-06T21:27:38,061 Created temporary directory: /tmp/pip-wheel-zi9a2kg_ 2025-06-06T21:27:38,065 Created temporary directory: /tmp/pip-ephem-wheel-cache-utsl5nxu 2025-06-06T21:27:38,112 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-06-06T21:27:38,115 2 location(s) to search for versions of gilda: 2025-06-06T21:27:38,115 * https://pypi.org/simple/gilda/ 2025-06-06T21:27:38,115 * https://www.piwheels.org/simple/gilda/ 2025-06-06T21:27:38,116 Fetching project page and analyzing links: https://pypi.org/simple/gilda/ 2025-06-06T21:27:38,116 Getting page https://pypi.org/simple/gilda/ 2025-06-06T21:27:38,118 Found index url https://pypi.org/simple/ 2025-06-06T21:27:38,264 Fetched page https://pypi.org/simple/gilda/ as application/vnd.pypi.simple.v1+json 2025-06-06T21:27:38,270 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/7a/33/c98b97ea6e7a0d7a35211fe4f71ef59d493cb3d4c6771dab609e8cf1a33e/gilda-0.2.0-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,271 Found link https://files.pythonhosted.org/packages/e3/a0/245e4bc1e09c64155496b18e37ac9100357f028392e3c54de7b3a1d1b06d/gilda-0.2.0.tar.gz (from https://pypi.org/simple/gilda/), version: 0.2.0 2025-06-06T21:27:38,271 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/03/ac/54bb404e5f61bc9702dbfd1ee633d8c930be3a4a2b785292cb036c867c57/gilda-0.2.1-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,272 Found link https://files.pythonhosted.org/packages/a8/3a/6d242e1555e718ecc91b79e4578a8016c4e0e4ad185ce0ace5992235673c/gilda-0.2.1.tar.gz (from https://pypi.org/simple/gilda/), version: 0.2.1 2025-06-06T21:27:38,272 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/33/15/e0057650f4058ed6a559f48cb4bd1c9692dc52b3c971b54aaaa7bda6e96c/gilda-0.2.3-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,273 Found link https://files.pythonhosted.org/packages/17/08/49149d1154a54399309e406a4682af7fc4fd3bb7f01b7512a6b012c44abe/gilda-0.2.3.tar.gz (from https://pypi.org/simple/gilda/), version: 0.2.3 2025-06-06T21:27:38,274 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/17/78/fa3069bbfe8e68b493f44d98484a44f745a872826be470ba6606c63e9167/gilda-0.3.2-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,275 Found link https://files.pythonhosted.org/packages/de/ba/4e497fa247b1da87073480ed73a019799c93984b617c3be04109c6763f44/gilda-0.3.2.tar.gz (from https://pypi.org/simple/gilda/), version: 0.3.2 2025-06-06T21:27:38,275 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/27/63/ab25939b5f0f0c7259378bcc3b122aa0ac27f5d4238644d0115ad3b50a0e/gilda-0.3.3-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,276 Found link https://files.pythonhosted.org/packages/fe/b3/026a94fd5e20dc41becd273e0f99761972200034c557f882821b29d89b14/gilda-0.3.3.tar.gz (from https://pypi.org/simple/gilda/), version: 0.3.3 2025-06-06T21:27:38,277 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/65/7f/a84d15aa038db7503e80cdca66ebc4e4bf297c920462c2da0b2245580641/gilda-0.4-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,277 Found link https://files.pythonhosted.org/packages/8d/ad/f4f7d92a0a5d1a93c63e6c0d19d67fa752ba2bc7df9741f7eb5e20e82ecc/gilda-0.4.tar.gz (from https://pypi.org/simple/gilda/), version: 0.4 2025-06-06T21:27:38,278 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/ba/33/55fda0f9083516f8a74fc4e179c070e2e93715dfd7d7f3ab387dd4ea5f06/gilda-0.5.2-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,279 Found link https://files.pythonhosted.org/packages/4b/69/7cb408b148a113ae7e696748f71feb86eff178e026c704966d22f01690d1/gilda-0.5.2.tar.gz (from https://pypi.org/simple/gilda/), version: 0.5.2 2025-06-06T21:27:38,279 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/fd/83/9074e9b2d8bdd8ffe511e7425f424b8b36e0d8d711150ec97e6afd26f353/gilda-0.5.3-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,280 Found link https://files.pythonhosted.org/packages/bc/ad/fd5bbdb2ba27208bd54e8bf515513fb23d140d4d4892b2f8167f706fa919/gilda-0.5.3.tar.gz (from https://pypi.org/simple/gilda/), version: 0.5.3 2025-06-06T21:27:38,280 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/86/a4/0ce712e4542bcf3a1ec9626489653346e95b2594ad8a4a1a06e0345a3c6c/gilda-0.6.0-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,281 Found link https://files.pythonhosted.org/packages/ea/5f/16a5ec0fc0b45f6500ab0aef49dd39dd55abaea3d28e26670092bb109d88/gilda-0.6.0.tar.gz (from https://pypi.org/simple/gilda/), version: 0.6.0 2025-06-06T21:27:38,281 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/d6/5a/e85d187123e677e213ca09b2dd8096cb2f6b95953fe8b905425213a1642c/gilda-0.6.1-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,282 Found link https://files.pythonhosted.org/packages/c9/c3/e88c59588f8bd6e558e3084773dfd8a3bad8a8b2b5814af1b3f906495cbb/gilda-0.6.1.tar.gz (from https://pypi.org/simple/gilda/), version: 0.6.1 2025-06-06T21:27:38,283 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/94/3a/b7683056e3c07f519b3d4f9f473b6f377d687a279820c7c54feb5b7c79fa/gilda-0.8.2-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,283 Found link https://files.pythonhosted.org/packages/3c/d6/8c7827ec3122a983bd13c12e611915646c126f7adde341042fdc37b37b91/gilda-0.8.2.tar.gz (from https://pypi.org/simple/gilda/), version: 0.8.2 2025-06-06T21:27:38,284 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/62/3f/db491c8d0116e95473331cb8ac6194a9a5ec6b321b058105b4c2a855196d/gilda-0.8.3-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,285 Found link https://files.pythonhosted.org/packages/b5/fc/ad2b1ef7661f6e4d0f1b853c2e0be93a22d4fc373b05b5bfbe4a83c34018/gilda-0.8.3.tar.gz (from https://pypi.org/simple/gilda/), version: 0.8.3 2025-06-06T21:27:38,285 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/4c/d2/2dd0e80be1f4367fa3b18e79b29fcc63d88b826beae33fd821ab99b0977d/gilda-0.9.0-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,286 Found link https://files.pythonhosted.org/packages/dc/ab/788ef328178bfd8faa528c5b6daf726fcab02f7a938765e9041ba5517641/gilda-0.9.0.tar.gz (from https://pypi.org/simple/gilda/), version: 0.9.0 2025-06-06T21:27:38,286 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/a0/ef/292f5f2aa0aaadc0ab6609a006df3861d9d77f0865845916cde1cdea205f/gilda-0.10.1-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,287 Found link https://files.pythonhosted.org/packages/91/65/acb00c2d36c6a9ed03b5b3bcd9729e260b4c86d89f3d2179df91ed7fd6db/gilda-0.10.1.tar.gz (from https://pypi.org/simple/gilda/), version: 0.10.1 2025-06-06T21:27:38,288 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/69/fe/f89738b68980ba6df25a54cf513a10ef45fc02691359cadbe875ca2c35ad/gilda-0.10.2-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,288 Found link https://files.pythonhosted.org/packages/83/c7/02bafe3d4e9fbb6333b2a3c2f345f4dec2c392b8108cf51260b9b8a4d8d3/gilda-0.10.2.tar.gz (from https://pypi.org/simple/gilda/), version: 0.10.2 2025-06-06T21:27:38,289 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/32/c8/9563d06e5179a2d801719c8a97473b77595e017805cba36eb3b4c937420b/gilda-0.10.3-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,290 Found link https://files.pythonhosted.org/packages/3b/fb/4c6a3aabca97c92df67d39301176e4b0077c67102c8f4c29cc6258701e7e/gilda-0.10.3.tar.gz (from https://pypi.org/simple/gilda/), version: 0.10.3 2025-06-06T21:27:38,290 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/c3/48/493ef43f78299cc39d0741437d21781c254ab464871761e635e510b16669/gilda-1.0.0-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,291 Found link https://files.pythonhosted.org/packages/00/01/76375b75532ff8d3ac4e6b765bf7c199136a4812c71cf598722cb2c11ad7/gilda-1.0.0.tar.gz (from https://pypi.org/simple/gilda/), version: 1.0.0 2025-06-06T21:27:38,291 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/4b/23/8a021ff7d880ab561b13f77c05dd6033c8c94ddb3c8bc91dd877eaeb2f4a/gilda-1.1.0-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,292 Found link https://files.pythonhosted.org/packages/ed/30/d16d572a503b5b6808aae0e1747996ffe0408b797b71ec812337db07c197/gilda-1.1.0.tar.gz (from https://pypi.org/simple/gilda/), version: 1.1.0 2025-06-06T21:27:38,292 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/fa/88/c450be479c2b15aa3f1ac265a773b80974b4c8df09467f8ac62e3460a067/gilda-1.2.0-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,293 Found link https://files.pythonhosted.org/packages/dc/83/6bbe9bd88c508f704dd81eb5fc33b4277a5312796f6d9940e4cf2dfa296f/gilda-1.2.0.tar.gz (from https://pypi.org/simple/gilda/), version: 1.2.0 2025-06-06T21:27:38,294 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/2e/50/9077e75746118b3f067713d86badb18d61cb8926c5f0361589c7d98bb1b1/gilda-1.2.1-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,294 Found link https://files.pythonhosted.org/packages/3e/d0/3e5e9434ab5ed96ef897d14223da4657e8046680b66e6819f4178543aded/gilda-1.2.1.tar.gz (from https://pypi.org/simple/gilda/), version: 1.2.1 2025-06-06T21:27:38,295 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/92/5b/24dd317c5cbc7524020641d6098958d17eee4376e1993713e962060b0049/gilda-1.4.0-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,295 Found link https://files.pythonhosted.org/packages/ee/f5/73f4351368f383c0fa1a11513213d64f6178aaf6f4944b364f12102beb77/gilda-1.4.0.tar.gz (from https://pypi.org/simple/gilda/), version: 1.4.0 2025-06-06T21:27:38,296 Skipping link: No binaries permitted for gilda: https://files.pythonhosted.org/packages/28/a4/ce8bfcc52c29ae38bbe8b39501c310d8de1b801e312ff5dd069303152582/gilda-1.4.1-py3-none-any.whl (from https://pypi.org/simple/gilda/) 2025-06-06T21:27:38,297 Found link https://files.pythonhosted.org/packages/44/f2/1e7923c51972f41e726fda5fe600fd192bd78c0ddaf47bd57466b11dd563/gilda-1.4.1.tar.gz (from https://pypi.org/simple/gilda/), version: 1.4.1 2025-06-06T21:27:38,298 Fetching project page and analyzing links: https://www.piwheels.org/simple/gilda/ 2025-06-06T21:27:38,298 Getting page https://www.piwheels.org/simple/gilda/ 2025-06-06T21:27:38,299 Found index url https://www.piwheels.org/simple/ 2025-06-06T21:27:38,449 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/gilda/ 2025-06-06T21:27:39,106 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/gilda/ 2025-06-06T21:27:40,261 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/gilda/ 2025-06-06T21:27:43,516 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/gilda/ 2025-06-06T21:27:47,733 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/gilda/ 2025-06-06T21:27:47,923 Could not fetch URL https://www.piwheels.org/simple/gilda/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/gilda/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-06-06T21:27:47,925 Skipping link: not a file: https://www.piwheels.org/simple/gilda/ 2025-06-06T21:27:47,925 Skipping link: not a file: https://pypi.org/simple/gilda/ 2025-06-06T21:27:47,945 Given no hashes to check 1 links for project 'gilda': discarding no candidates 2025-06-06T21:27:47,947 Collecting gilda==1.4.1 2025-06-06T21:27:47,950 Created temporary directory: /tmp/pip-unpack-lt1_oj0g 2025-06-06T21:27:48,173 Downloading gilda-1.4.1.tar.gz (715 kB) 2025-06-06T21:27:48,489 Added gilda==1.4.1 from https://files.pythonhosted.org/packages/44/f2/1e7923c51972f41e726fda5fe600fd192bd78c0ddaf47bd57466b11dd563/gilda-1.4.1.tar.gz to build tracker '/tmp/pip-build-tracker-qqdxrbjy' 2025-06-06T21:27:48,491 Running setup.py (path:/tmp/pip-wheel-zi9a2kg_/gilda_68147c6da217457fa2ce8fdde4c1ce2f/setup.py) egg_info for package gilda 2025-06-06T21:27:48,492 Created temporary directory: /tmp/pip-pip-egg-info-oi2c94ix 2025-06-06T21:27:48,492 Preparing metadata (setup.py): started 2025-06-06T21:27:48,493 Running command python setup.py egg_info 2025-06-06T21:27:49,401 running egg_info 2025-06-06T21:27:49,428 creating /tmp/pip-pip-egg-info-oi2c94ix/gilda.egg-info 2025-06-06T21:27:49,429 writing /tmp/pip-pip-egg-info-oi2c94ix/gilda.egg-info/PKG-INFO 2025-06-06T21:27:49,437 writing dependency_links to /tmp/pip-pip-egg-info-oi2c94ix/gilda.egg-info/dependency_links.txt 2025-06-06T21:27:49,438 writing entry points to /tmp/pip-pip-egg-info-oi2c94ix/gilda.egg-info/entry_points.txt 2025-06-06T21:27:49,442 writing requirements to /tmp/pip-pip-egg-info-oi2c94ix/gilda.egg-info/requires.txt 2025-06-06T21:27:49,443 writing top-level names to /tmp/pip-pip-egg-info-oi2c94ix/gilda.egg-info/top_level.txt 2025-06-06T21:27:49,445 writing manifest file '/tmp/pip-pip-egg-info-oi2c94ix/gilda.egg-info/SOURCES.txt' 2025-06-06T21:27:49,534 reading manifest file '/tmp/pip-pip-egg-info-oi2c94ix/gilda.egg-info/SOURCES.txt' 2025-06-06T21:27:49,536 reading manifest template 'MANIFEST.in' 2025-06-06T21:27:49,540 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2025-06-06T21:27:49,541 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2025-06-06T21:27:49,541 warning: no previously-included files matching '*.so' found anywhere in distribution 2025-06-06T21:27:49,542 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2025-06-06T21:27:49,542 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2025-06-06T21:27:49,543 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2025-06-06T21:27:49,544 adding license file 'LICENSE' 2025-06-06T21:27:49,547 writing manifest file '/tmp/pip-pip-egg-info-oi2c94ix/gilda.egg-info/SOURCES.txt' 2025-06-06T21:27:49,652 Preparing metadata (setup.py): finished with status 'done' 2025-06-06T21:27:49,657 Source in /tmp/pip-wheel-zi9a2kg_/gilda_68147c6da217457fa2ce8fdde4c1ce2f has version 1.4.1, which satisfies requirement gilda==1.4.1 from https://files.pythonhosted.org/packages/44/f2/1e7923c51972f41e726fda5fe600fd192bd78c0ddaf47bd57466b11dd563/gilda-1.4.1.tar.gz 2025-06-06T21:27:49,658 Removed gilda==1.4.1 from https://files.pythonhosted.org/packages/44/f2/1e7923c51972f41e726fda5fe600fd192bd78c0ddaf47bd57466b11dd563/gilda-1.4.1.tar.gz from build tracker '/tmp/pip-build-tracker-qqdxrbjy' 2025-06-06T21:27:49,672 Created temporary directory: /tmp/pip-unpack-3xei6izf 2025-06-06T21:27:49,673 Created temporary directory: /tmp/pip-unpack-aho3eeae 2025-06-06T21:27:49,673 Building wheels for collected packages: gilda 2025-06-06T21:27:49,678 Created temporary directory: /tmp/pip-wheel-oerjvdlj 2025-06-06T21:27:49,678 DEPRECATION: Building 'gilda' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'gilda'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-06-06T21:27:49,680 Building wheel for gilda (setup.py): started 2025-06-06T21:27:49,681 Destination directory: /tmp/pip-wheel-oerjvdlj 2025-06-06T21:27:49,681 Running command python setup.py bdist_wheel 2025-06-06T21:27:50,503 running bdist_wheel 2025-06-06T21:27:50,633 running build 2025-06-06T21:27:50,634 running build_py 2025-06-06T21:27:50,663 creating build/lib/gilda 2025-06-06T21:27:50,666 copying gilda/generate_terms.py -> build/lib/gilda 2025-06-06T21:27:50,669 copying gilda/grounder.py -> build/lib/gilda 2025-06-06T21:27:50,671 copying gilda/api.py -> build/lib/gilda 2025-06-06T21:27:50,674 copying gilda/greek_alphabet.py -> build/lib/gilda 2025-06-06T21:27:50,676 copying gilda/term.py -> build/lib/gilda 2025-06-06T21:27:50,679 copying gilda/scorer.py -> build/lib/gilda 2025-06-06T21:27:50,681 copying gilda/__init__.py -> build/lib/gilda 2025-06-06T21:27:50,683 copying gilda/pandas_utils.py -> build/lib/gilda 2025-06-06T21:27:50,685 copying gilda/ner.py -> build/lib/gilda 2025-06-06T21:27:50,687 copying gilda/process.py -> build/lib/gilda 2025-06-06T21:27:50,690 creating build/lib/gilda/tests 2025-06-06T21:27:50,691 copying gilda/tests/test_pandas_utils.py -> build/lib/gilda/tests 2025-06-06T21:27:50,692 copying gilda/tests/test_ner.py -> build/lib/gilda/tests 2025-06-06T21:27:50,694 copying gilda/tests/test_generate_terms.py -> build/lib/gilda/tests 2025-06-06T21:27:50,696 copying gilda/tests/test_app.py -> build/lib/gilda/tests 2025-06-06T21:27:50,698 copying gilda/tests/test_api.py -> build/lib/gilda/tests 2025-06-06T21:27:50,700 copying gilda/tests/__init__.py -> build/lib/gilda/tests 2025-06-06T21:27:50,702 copying gilda/tests/test_term.py -> build/lib/gilda/tests 2025-06-06T21:27:50,704 copying gilda/tests/test_grounder.py -> build/lib/gilda/tests 2025-06-06T21:27:50,706 copying gilda/tests/test_scorer.py -> build/lib/gilda/tests 2025-06-06T21:27:50,708 copying gilda/tests/test_process.py -> build/lib/gilda/tests 2025-06-06T21:27:50,710 creating build/lib/gilda/app 2025-06-06T21:27:50,711 copying gilda/app/app.py -> build/lib/gilda/app 2025-06-06T21:27:50,714 copying gilda/app/ui.py -> build/lib/gilda/app 2025-06-06T21:27:50,716 copying gilda/app/__init__.py -> build/lib/gilda/app 2025-06-06T21:27:50,718 copying gilda/app/proxies.py -> build/lib/gilda/app 2025-06-06T21:27:50,720 copying gilda/app/__main__.py -> build/lib/gilda/app 2025-06-06T21:27:50,722 creating build/lib/gilda/resources 2025-06-06T21:27:50,723 copying gilda/resources/__init__.py -> build/lib/gilda/resources 2025-06-06T21:27:50,726 copying gilda/resources/__main__.py -> build/lib/gilda/resources 2025-06-06T21:27:50,728 copying gilda/resources/sqlite_adapter.py -> build/lib/gilda/resources 2025-06-06T21:27:50,729 running egg_info 2025-06-06T21:27:50,756 writing gilda.egg-info/PKG-INFO 2025-06-06T21:27:50,763 writing dependency_links to gilda.egg-info/dependency_links.txt 2025-06-06T21:27:50,765 writing entry points to gilda.egg-info/entry_points.txt 2025-06-06T21:27:50,769 writing requirements to gilda.egg-info/requires.txt 2025-06-06T21:27:50,770 writing top-level names to gilda.egg-info/top_level.txt 2025-06-06T21:27:50,804 reading manifest file 'gilda.egg-info/SOURCES.txt' 2025-06-06T21:27:50,808 reading manifest template 'MANIFEST.in' 2025-06-06T21:27:50,811 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2025-06-06T21:27:50,812 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2025-06-06T21:27:50,813 warning: no previously-included files matching '*.so' found anywhere in distribution 2025-06-06T21:27:50,813 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2025-06-06T21:27:50,814 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2025-06-06T21:27:50,815 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2025-06-06T21:27:50,815 adding license file 'LICENSE' 2025-06-06T21:27:50,819 writing manifest file 'gilda.egg-info/SOURCES.txt' 2025-06-06T21:27:50,822 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'gilda.app.templates' is absent from the `packages` configuration. 2025-06-06T21:27:50,822 !! 2025-06-06T21:27:50,823 ******************************************************************************** 2025-06-06T21:27:50,824 ############################ 2025-06-06T21:27:50,824 # Package would be ignored # 2025-06-06T21:27:50,825 ############################ 2025-06-06T21:27:50,825 Python recognizes 'gilda.app.templates' as an importable package[^1], 2025-06-06T21:27:50,826 but it is absent from setuptools' `packages` configuration. 2025-06-06T21:27:50,827 This leads to an ambiguous overall configuration. If you want to distribute this 2025-06-06T21:27:50,827 package, please make sure that 'gilda.app.templates' is explicitly added 2025-06-06T21:27:50,828 to the `packages` configuration field. 2025-06-06T21:27:50,829 Alternatively, you can also rely on setuptools' discovery methods 2025-06-06T21:27:50,829 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-06-06T21:27:50,830 instead of `find_packages(...)`/`find:`). 2025-06-06T21:27:50,831 You can read more about "package discovery" on setuptools documentation page: 2025-06-06T21:27:50,832 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-06-06T21:27:50,833 If you don't want 'gilda.app.templates' to be distributed and are 2025-06-06T21:27:50,834 already explicitly excluding 'gilda.app.templates' via 2025-06-06T21:27:50,834 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-06-06T21:27:50,835 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-06-06T21:27:50,835 combination with a more fine grained `package-data` configuration. 2025-06-06T21:27:50,837 You can read more about "package data files" on setuptools documentation page: 2025-06-06T21:27:50,838 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-06-06T21:27:50,839 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-06-06T21:27:50,840 even if it does not contain any `.py` files. 2025-06-06T21:27:50,841 On the other hand, currently there is no concept of package data 2025-06-06T21:27:50,841 directory, all directories are treated like packages. 2025-06-06T21:27:50,842 ******************************************************************************** 2025-06-06T21:27:50,843 !! 2025-06-06T21:27:50,843 check.warn(importable) 2025-06-06T21:27:50,845 creating build/lib/gilda/app/templates 2025-06-06T21:27:50,846 copying gilda/app/templates/base.html -> build/lib/gilda/app/templates 2025-06-06T21:27:50,847 copying gilda/app/templates/home.html -> build/lib/gilda/app/templates 2025-06-06T21:27:50,855 copying gilda/app/templates/matches.html -> build/lib/gilda/app/templates 2025-06-06T21:27:50,855 copying gilda/app/templates/ner_home.html -> build/lib/gilda/app/templates 2025-06-06T21:27:50,856 copying gilda/app/templates/ner_matches.html -> build/lib/gilda/app/templates 2025-06-06T21:27:50,856 copying gilda/resources/mesh_ambig_mappings.tsv -> build/lib/gilda/resources 2025-06-06T21:27:50,857 copying gilda/resources/mesh_mappings.tsv -> build/lib/gilda/resources 2025-06-06T21:27:50,889 copying gilda/resources/ner_stoplist.txt -> build/lib/gilda/resources 2025-06-06T21:27:50,919 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-06-06T21:27:50,920 !! 2025-06-06T21:27:50,921 ******************************************************************************** 2025-06-06T21:27:50,921 Please avoid running ``setup.py`` directly. 2025-06-06T21:27:50,922 Instead, use pypa/build, pypa/installer or other 2025-06-06T21:27:50,922 standards-based tools. 2025-06-06T21:27:50,923 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-06T21:27:50,924 or your builds will no longer be supported. 2025-06-06T21:27:50,925 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-06-06T21:27:50,925 ******************************************************************************** 2025-06-06T21:27:50,926 !! 2025-06-06T21:27:50,927 self.initialize_options() 2025-06-06T21:27:50,947 installing to build/bdist.linux-armv7l/wheel 2025-06-06T21:27:50,948 running install 2025-06-06T21:27:50,970 running install_lib 2025-06-06T21:27:50,996 creating build/bdist.linux-armv7l/wheel 2025-06-06T21:27:50,998 creating build/bdist.linux-armv7l/wheel/gilda 2025-06-06T21:27:51,000 creating build/bdist.linux-armv7l/wheel/gilda/tests 2025-06-06T21:27:51,002 copying build/lib/gilda/tests/test_pandas_utils.py -> build/bdist.linux-armv7l/wheel/./gilda/tests 2025-06-06T21:27:51,003 copying build/lib/gilda/tests/test_ner.py -> build/bdist.linux-armv7l/wheel/./gilda/tests 2025-06-06T21:27:51,005 copying build/lib/gilda/tests/test_generate_terms.py -> build/bdist.linux-armv7l/wheel/./gilda/tests 2025-06-06T21:27:51,007 copying build/lib/gilda/tests/test_app.py -> build/bdist.linux-armv7l/wheel/./gilda/tests 2025-06-06T21:27:51,009 copying build/lib/gilda/tests/test_api.py -> build/bdist.linux-armv7l/wheel/./gilda/tests 2025-06-06T21:27:51,011 copying build/lib/gilda/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./gilda/tests 2025-06-06T21:27:51,013 copying build/lib/gilda/tests/test_term.py -> build/bdist.linux-armv7l/wheel/./gilda/tests 2025-06-06T21:27:51,014 copying build/lib/gilda/tests/test_grounder.py -> build/bdist.linux-armv7l/wheel/./gilda/tests 2025-06-06T21:27:51,017 copying build/lib/gilda/tests/test_scorer.py -> build/bdist.linux-armv7l/wheel/./gilda/tests 2025-06-06T21:27:51,018 copying build/lib/gilda/tests/test_process.py -> build/bdist.linux-armv7l/wheel/./gilda/tests 2025-06-06T21:27:51,020 copying build/lib/gilda/generate_terms.py -> build/bdist.linux-armv7l/wheel/./gilda 2025-06-06T21:27:51,023 copying build/lib/gilda/grounder.py -> build/bdist.linux-armv7l/wheel/./gilda 2025-06-06T21:27:51,025 copying build/lib/gilda/api.py -> build/bdist.linux-armv7l/wheel/./gilda 2025-06-06T21:27:51,027 copying build/lib/gilda/greek_alphabet.py -> build/bdist.linux-armv7l/wheel/./gilda 2025-06-06T21:27:51,029 copying build/lib/gilda/term.py -> build/bdist.linux-armv7l/wheel/./gilda 2025-06-06T21:27:51,031 copying build/lib/gilda/scorer.py -> build/bdist.linux-armv7l/wheel/./gilda 2025-06-06T21:27:51,033 copying build/lib/gilda/__init__.py -> build/bdist.linux-armv7l/wheel/./gilda 2025-06-06T21:27:51,036 creating build/bdist.linux-armv7l/wheel/gilda/app 2025-06-06T21:27:51,036 copying build/lib/gilda/app/app.py -> build/bdist.linux-armv7l/wheel/./gilda/app 2025-06-06T21:27:51,039 copying build/lib/gilda/app/ui.py -> build/bdist.linux-armv7l/wheel/./gilda/app 2025-06-06T21:27:51,041 creating build/bdist.linux-armv7l/wheel/gilda/app/templates 2025-06-06T21:27:51,042 copying build/lib/gilda/app/templates/base.html -> build/bdist.linux-armv7l/wheel/./gilda/app/templates 2025-06-06T21:27:51,045 copying build/lib/gilda/app/templates/ner_home.html -> build/bdist.linux-armv7l/wheel/./gilda/app/templates 2025-06-06T21:27:51,046 copying build/lib/gilda/app/templates/matches.html -> build/bdist.linux-armv7l/wheel/./gilda/app/templates 2025-06-06T21:27:51,048 copying build/lib/gilda/app/templates/home.html -> build/bdist.linux-armv7l/wheel/./gilda/app/templates 2025-06-06T21:27:51,050 copying build/lib/gilda/app/templates/ner_matches.html -> build/bdist.linux-armv7l/wheel/./gilda/app/templates 2025-06-06T21:27:51,052 copying build/lib/gilda/app/__init__.py -> build/bdist.linux-armv7l/wheel/./gilda/app 2025-06-06T21:27:51,054 copying build/lib/gilda/app/proxies.py -> build/bdist.linux-armv7l/wheel/./gilda/app 2025-06-06T21:27:51,055 copying build/lib/gilda/app/__main__.py -> build/bdist.linux-armv7l/wheel/./gilda/app 2025-06-06T21:27:51,057 copying build/lib/gilda/pandas_utils.py -> build/bdist.linux-armv7l/wheel/./gilda 2025-06-06T21:27:51,059 copying build/lib/gilda/ner.py -> build/bdist.linux-armv7l/wheel/./gilda 2025-06-06T21:27:51,062 creating build/bdist.linux-armv7l/wheel/gilda/resources 2025-06-06T21:27:51,063 copying build/lib/gilda/resources/ner_stoplist.txt -> build/bdist.linux-armv7l/wheel/./gilda/resources 2025-06-06T21:27:51,065 copying build/lib/gilda/resources/mesh_ambig_mappings.tsv -> build/bdist.linux-armv7l/wheel/./gilda/resources 2025-06-06T21:27:51,069 copying build/lib/gilda/resources/mesh_mappings.tsv -> build/bdist.linux-armv7l/wheel/./gilda/resources 2025-06-06T21:27:51,113 copying build/lib/gilda/resources/__init__.py -> build/bdist.linux-armv7l/wheel/./gilda/resources 2025-06-06T21:27:51,115 copying build/lib/gilda/resources/__main__.py -> build/bdist.linux-armv7l/wheel/./gilda/resources 2025-06-06T21:27:51,117 copying build/lib/gilda/resources/sqlite_adapter.py -> build/bdist.linux-armv7l/wheel/./gilda/resources 2025-06-06T21:27:51,119 copying build/lib/gilda/process.py -> build/bdist.linux-armv7l/wheel/./gilda 2025-06-06T21:27:51,121 running install_egg_info 2025-06-06T21:27:51,157 Copying gilda.egg-info to build/bdist.linux-armv7l/wheel/./gilda-1.4.1-py3.11.egg-info 2025-06-06T21:27:51,168 running install_scripts 2025-06-06T21:27:51,182 creating build/bdist.linux-armv7l/wheel/gilda-1.4.1.dist-info/WHEEL 2025-06-06T21:27:51,185 creating '/tmp/pip-wheel-oerjvdlj/gilda-1.4.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-06-06T21:27:51,187 adding 'gilda/__init__.py' 2025-06-06T21:27:51,190 adding 'gilda/api.py' 2025-06-06T21:27:51,194 adding 'gilda/generate_terms.py' 2025-06-06T21:27:51,196 adding 'gilda/greek_alphabet.py' 2025-06-06T21:27:51,200 adding 'gilda/grounder.py' 2025-06-06T21:27:51,202 adding 'gilda/ner.py' 2025-06-06T21:27:51,204 adding 'gilda/pandas_utils.py' 2025-06-06T21:27:51,206 adding 'gilda/process.py' 2025-06-06T21:27:51,208 adding 'gilda/scorer.py' 2025-06-06T21:27:51,210 adding 'gilda/term.py' 2025-06-06T21:27:51,213 adding 'gilda/app/__init__.py' 2025-06-06T21:27:51,215 adding 'gilda/app/__main__.py' 2025-06-06T21:27:51,217 adding 'gilda/app/app.py' 2025-06-06T21:27:51,218 adding 'gilda/app/proxies.py' 2025-06-06T21:27:51,220 adding 'gilda/app/ui.py' 2025-06-06T21:27:51,222 adding 'gilda/app/templates/base.html' 2025-06-06T21:27:51,223 adding 'gilda/app/templates/home.html' 2025-06-06T21:27:51,224 adding 'gilda/app/templates/matches.html' 2025-06-06T21:27:51,225 adding 'gilda/app/templates/ner_home.html' 2025-06-06T21:27:51,227 adding 'gilda/app/templates/ner_matches.html' 2025-06-06T21:27:51,228 adding 'gilda/resources/__init__.py' 2025-06-06T21:27:51,229 adding 'gilda/resources/__main__.py' 2025-06-06T21:27:51,244 adding 'gilda/resources/mesh_ambig_mappings.tsv' 2025-06-06T21:27:51,549 adding 'gilda/resources/mesh_mappings.tsv' 2025-06-06T21:27:51,564 adding 'gilda/resources/ner_stoplist.txt' 2025-06-06T21:27:51,565 adding 'gilda/resources/sqlite_adapter.py' 2025-06-06T21:27:51,566 adding 'gilda/tests/__init__.py' 2025-06-06T21:27:51,568 adding 'gilda/tests/test_api.py' 2025-06-06T21:27:51,569 adding 'gilda/tests/test_app.py' 2025-06-06T21:27:51,570 adding 'gilda/tests/test_generate_terms.py' 2025-06-06T21:27:51,572 adding 'gilda/tests/test_grounder.py' 2025-06-06T21:27:51,574 adding 'gilda/tests/test_ner.py' 2025-06-06T21:27:51,575 adding 'gilda/tests/test_pandas_utils.py' 2025-06-06T21:27:51,576 adding 'gilda/tests/test_process.py' 2025-06-06T21:27:51,577 adding 'gilda/tests/test_scorer.py' 2025-06-06T21:27:51,579 adding 'gilda/tests/test_term.py' 2025-06-06T21:27:51,581 adding 'gilda-1.4.1.dist-info/licenses/LICENSE' 2025-06-06T21:27:51,583 adding 'gilda-1.4.1.dist-info/METADATA' 2025-06-06T21:27:51,584 adding 'gilda-1.4.1.dist-info/WHEEL' 2025-06-06T21:27:51,585 adding 'gilda-1.4.1.dist-info/entry_points.txt' 2025-06-06T21:27:51,585 adding 'gilda-1.4.1.dist-info/top_level.txt' 2025-06-06T21:27:51,587 adding 'gilda-1.4.1.dist-info/RECORD' 2025-06-06T21:27:51,600 removing build/bdist.linux-armv7l/wheel 2025-06-06T21:27:51,717 Building wheel for gilda (setup.py): finished with status 'done' 2025-06-06T21:27:51,727 Created wheel for gilda: filename=gilda-1.4.1-py3-none-any.whl size=721098 sha256=23718d088dae7285005fcf5c2cd0b8e2b5a3a5997b0c71ce205acd301e6fc866 2025-06-06T21:27:51,728 Stored in directory: /tmp/pip-ephem-wheel-cache-utsl5nxu/wheels/34/b4/07/b907bf7b3a08d3d346a4a5cfb301dde72e81eb4b95c8ee0568 2025-06-06T21:27:51,742 Successfully built gilda 2025-06-06T21:27:51,761 Removed build tracker: '/tmp/pip-build-tracker-qqdxrbjy'