2025-06-07T22:05:32,294 Created temporary directory: /tmp/pip-build-tracker-h6j5oy23
2025-06-07T22:05:32,295 Initialized build tracking at /tmp/pip-build-tracker-h6j5oy23
2025-06-07T22:05:32,296 Created build tracker: /tmp/pip-build-tracker-h6j5oy23
2025-06-07T22:05:32,296 Entered build tracker: /tmp/pip-build-tracker-h6j5oy23
2025-06-07T22:05:32,297 Created temporary directory: /tmp/pip-wheel-xeq9p3i7
2025-06-07T22:05:32,301 Created temporary directory: /tmp/pip-ephem-wheel-cache-h8fohqa9
2025-06-07T22:05:32,351 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-06-07T22:05:32,353 2 location(s) to search for versions of td2:
2025-06-07T22:05:32,353 * https://pypi.org/simple/td2/
2025-06-07T22:05:32,353 * https://www.piwheels.org/simple/td2/
2025-06-07T22:05:32,354 Fetching project page and analyzing links: https://pypi.org/simple/td2/
2025-06-07T22:05:32,355 Getting page https://pypi.org/simple/td2/
2025-06-07T22:05:32,357 Found index url https://pypi.org/simple/
2025-06-07T22:05:32,582 Fetched page https://pypi.org/simple/td2/ as application/vnd.pypi.simple.v1+json
2025-06-07T22:05:32,584   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/43/52/258b0d913bfa795951cd68eb8f202e56bb686e2ac215bd537f5e5d8523a9/TD2-0.1.0-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:>=3.8)
2025-06-07T22:05:32,585   Found link https://files.pythonhosted.org/packages/ad/37/151603746c26b5ef38676339bbf67afdb530888937fbb8e1e775f27208ac/td2-0.1.0.tar.gz (from https://pypi.org/simple/td2/) (requires-python:>=3.8), version: 0.1.0
2025-06-07T22:05:32,586   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/f6/f9/c52c232ea9f0677a8dcc8372c808f2db059730d017e5081a1c0ce151398c/TD2-1.0.0-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-07T22:05:32,587   Found link https://files.pythonhosted.org/packages/42/df/2123f303f9668376b0783d67b0dc1d77ab320fcd7cd6499b54d2bbdf24ee/td2-1.0.0.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.0
2025-06-07T22:05:32,588   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/ff/a4/ab6be14acf5c1f585afc4881d8fc05f1aa2ba8985326d9af761acf9feaa4/td2-1.0.1-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-07T22:05:32,588   Found link https://files.pythonhosted.org/packages/27/76/0de889e7ac948b0a6c8de999fac74484afebb986c22a31f1541ed61cf3a9/td2-1.0.1.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.1
2025-06-07T22:05:32,589   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/0b/85/7fa6d4c7d930f86d60ad89ece226cabe83198b2f640b4936c9b826934d8e/TD2-1.0.2-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-07T22:05:32,590   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/59/7f/c557088b575b11b930a810c4b08d7947c231bfbd6083e23691ab6d4f35d7/td2-1.0.2-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-07T22:05:32,591   Found link https://files.pythonhosted.org/packages/03/86/7cacd5aebbaf6de14d05cd2c46ab4d8214bd5674713e018237f19510054f/td2-1.0.2.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.2
2025-06-07T22:05:32,591   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/9c/12/08401c017e913b8fd32b212039af4a257aad486f53600624d391560eb554/TD2-1.0.3-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-07T22:05:32,592   Found link https://files.pythonhosted.org/packages/f1/d4/7572f90f0da85e70bd129c15ed61ae301c5897b5e65d3156c602cf62fa1a/td2-1.0.3.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.3
2025-06-07T22:05:32,593   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/c3/e0/adcb22d02f8881bdfce4a3c89003203115487946a2015cb5350d7c8884f3/TD2-1.0.5-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-07T22:05:32,593   Found link https://files.pythonhosted.org/packages/d6/33/ef87f351e48b90f3fe892c982e721592fdbbf7b40d9bf34faf0a3a13198b/td2-1.0.5.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.5
2025-06-07T22:05:32,594   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/ab/bc/6cb935774ae1b624faff92638a3422f0f12aeaf5f61ff820adbbd36464fc/td2-1.0.6-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-07T22:05:32,595   Found link https://files.pythonhosted.org/packages/ef/4f/51dd7d1bd195d6e58d3efca71051ccd24219e3ad7c50098ecd63d9d83970/td2-1.0.6.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.6
2025-06-07T22:05:32,596 Fetching project page and analyzing links: https://www.piwheels.org/simple/td2/
2025-06-07T22:05:32,596 Getting page https://www.piwheels.org/simple/td2/
2025-06-07T22:05:32,598 Found index url https://www.piwheels.org/simple/
2025-06-07T22:05:32,751 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/td2/
2025-06-07T22:05:33,408 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/td2/
2025-06-07T22:05:34,605 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/td2/
2025-06-07T22:05:36,823 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/td2/
2025-06-07T22:05:41,016 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/td2/
2025-06-07T22:05:41,234 Could not fetch URL https://www.piwheels.org/simple/td2/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/td2/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping
2025-06-07T22:05:41,236 Skipping link: not a file: https://www.piwheels.org/simple/td2/
2025-06-07T22:05:41,236 Skipping link: not a file: https://pypi.org/simple/td2/
2025-06-07T22:05:41,254 Given no hashes to check 1 links for project 'td2': discarding no candidates
2025-06-07T22:05:41,256 Collecting td2==1.0.2
2025-06-07T22:05:41,258   Created temporary directory: /tmp/pip-unpack-8tfpms48
2025-06-07T22:05:41,481   Downloading td2-1.0.2.tar.gz (38 kB)
2025-06-07T22:05:41,608   Added td2==1.0.2 from https://files.pythonhosted.org/packages/03/86/7cacd5aebbaf6de14d05cd2c46ab4d8214bd5674713e018237f19510054f/td2-1.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-h6j5oy23'
2025-06-07T22:05:41,611   Running setup.py (path:/tmp/pip-wheel-xeq9p3i7/td2_63c97f60ba4c49d0af38dcf737abfdc1/setup.py) egg_info for package td2
2025-06-07T22:05:41,612   Created temporary directory: /tmp/pip-pip-egg-info-yg_6pybw
2025-06-07T22:05:41,612   Preparing metadata (setup.py): started
2025-06-07T22:05:41,614   Running command python setup.py egg_info
2025-06-07T22:05:42,490   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-07T22:05:42,490   !!

2025-06-07T22:05:42,492           ********************************************************************************
2025-06-07T22:05:42,492           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-07T22:05:42,493           License :: OSI Approved :: MIT License

2025-06-07T22:05:42,494           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-07T22:05:42,494           ********************************************************************************

2025-06-07T22:05:42,495   !!
2025-06-07T22:05:42,496     self._finalize_license_expression()
2025-06-07T22:05:42,517   running egg_info
2025-06-07T22:05:42,544   creating /tmp/pip-pip-egg-info-yg_6pybw/TD2.egg-info
2025-06-07T22:05:42,545   writing /tmp/pip-pip-egg-info-yg_6pybw/TD2.egg-info/PKG-INFO
2025-06-07T22:05:42,549   writing dependency_links to /tmp/pip-pip-egg-info-yg_6pybw/TD2.egg-info/dependency_links.txt
2025-06-07T22:05:42,551   writing entry points to /tmp/pip-pip-egg-info-yg_6pybw/TD2.egg-info/entry_points.txt
2025-06-07T22:05:42,553   writing requirements to /tmp/pip-pip-egg-info-yg_6pybw/TD2.egg-info/requires.txt
2025-06-07T22:05:42,554   writing top-level names to /tmp/pip-pip-egg-info-yg_6pybw/TD2.egg-info/top_level.txt
2025-06-07T22:05:42,556   writing manifest file '/tmp/pip-pip-egg-info-yg_6pybw/TD2.egg-info/SOURCES.txt'
2025-06-07T22:05:42,656   reading manifest file '/tmp/pip-pip-egg-info-yg_6pybw/TD2.egg-info/SOURCES.txt'
2025-06-07T22:05:42,657   reading manifest template 'MANIFEST.in'
2025-06-07T22:05:42,658   warning: no files found matching 'tables/table_*.json'
2025-06-07T22:05:42,659   adding license file 'LICENSE.txt'
2025-06-07T22:05:42,662   writing manifest file '/tmp/pip-pip-egg-info-yg_6pybw/TD2.egg-info/SOURCES.txt'
2025-06-07T22:05:42,768   Preparing metadata (setup.py): finished with status 'done'
2025-06-07T22:05:42,772   Source in /tmp/pip-wheel-xeq9p3i7/td2_63c97f60ba4c49d0af38dcf737abfdc1 has version 1.0.2, which satisfies requirement td2==1.0.2 from https://files.pythonhosted.org/packages/03/86/7cacd5aebbaf6de14d05cd2c46ab4d8214bd5674713e018237f19510054f/td2-1.0.2.tar.gz
2025-06-07T22:05:42,772   Removed td2==1.0.2 from https://files.pythonhosted.org/packages/03/86/7cacd5aebbaf6de14d05cd2c46ab4d8214bd5674713e018237f19510054f/td2-1.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-h6j5oy23'
2025-06-07T22:05:42,782 Created temporary directory: /tmp/pip-unpack-adfrm67t
2025-06-07T22:05:42,783 Created temporary directory: /tmp/pip-unpack-58pnf4qm
2025-06-07T22:05:42,784 Building wheels for collected packages: td2
2025-06-07T22:05:42,788   Created temporary directory: /tmp/pip-wheel-3n_royc0
2025-06-07T22:05:42,789   DEPRECATION: Building 'td2' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'td2'. Discussion can be found at https://github.com/pypa/pip/issues/6334
2025-06-07T22:05:42,790   Building wheel for td2 (setup.py): started
2025-06-07T22:05:42,791   Destination directory: /tmp/pip-wheel-3n_royc0
2025-06-07T22:05:42,792   Running command python setup.py bdist_wheel
2025-06-07T22:05:43,601   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-07T22:05:43,601   !!

2025-06-07T22:05:43,602           ********************************************************************************
2025-06-07T22:05:43,603           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-07T22:05:43,604           License :: OSI Approved :: MIT License

2025-06-07T22:05:43,606           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-07T22:05:43,606           ********************************************************************************

2025-06-07T22:05:43,607   !!
2025-06-07T22:05:43,608     self._finalize_license_expression()
2025-06-07T22:05:43,609   running bdist_wheel
2025-06-07T22:05:43,735   running build
2025-06-07T22:05:43,736   running build_py
2025-06-07T22:05:43,766   creating build/lib/tests
2025-06-07T22:05:43,769   copying tests/test_translate.py -> build/lib/tests
2025-06-07T22:05:43,770   copying tests/longorfs_low_memory.py -> build/lib/tests
2025-06-07T22:05:43,773   copying tests/visualize_mane_composition.py -> build/lib/tests
2025-06-07T22:05:43,775   copying tests/visualize_chess.py -> build/lib/tests
2025-06-07T22:05:43,776   copying tests/compare_peps.py -> build/lib/tests
2025-06-07T22:05:43,779   copying tests/test_find_orfs.py -> build/lib/tests
2025-06-07T22:05:43,780   copying tests/test_find_orfs_real.py -> build/lib/tests
2025-06-07T22:05:43,783   copying tests/__init__.py -> build/lib/tests
2025-06-07T22:05:43,784   copying tests/ambiguous_codon_test.py -> build/lib/tests
2025-06-07T22:05:43,786   copying tests/test_reverse_complement.py -> build/lib/tests
2025-06-07T22:05:43,788   copying tests/partition_mane.py -> build/lib/tests
2025-06-07T22:05:43,790   copying tests/visualize_benchmark.py -> build/lib/tests
2025-06-07T22:05:43,792   creating build/lib/TD2
2025-06-07T22:05:43,793   copying TD2/Predict.py -> build/lib/TD2
2025-06-07T22:05:43,796   copying TD2/LongOrfs.py -> build/lib/TD2
2025-06-07T22:05:43,798   copying TD2/__init__.py -> build/lib/TD2
2025-06-07T22:05:43,800   copying TD2/translator.py -> build/lib/TD2
2025-06-07T22:05:43,802   copying TD2/get_tables.py -> build/lib/TD2
2025-06-07T22:05:43,804   copying TD2/help.py -> build/lib/TD2
2025-06-07T22:05:43,806   creating build/lib/api
2025-06-07T22:05:43,807   copying api/__init__.py -> build/lib/api
2025-06-07T22:05:43,809   creating build/lib/tests/data
2025-06-07T22:05:43,810   copying tests/data/__init__.py -> build/lib/tests/data
2025-06-07T22:05:43,812   creating build/lib/TD2/tables
2025-06-07T22:05:43,813   copying TD2/tables/__init__.py -> build/lib/TD2/tables
2025-06-07T22:05:43,814   running egg_info
2025-06-07T22:05:43,840   writing TD2.egg-info/PKG-INFO
2025-06-07T22:05:43,845   writing dependency_links to TD2.egg-info/dependency_links.txt
2025-06-07T22:05:43,846   writing entry points to TD2.egg-info/entry_points.txt
2025-06-07T22:05:43,849   writing requirements to TD2.egg-info/requires.txt
2025-06-07T22:05:43,850   writing top-level names to TD2.egg-info/top_level.txt
2025-06-07T22:05:43,893   reading manifest file 'TD2.egg-info/SOURCES.txt'
2025-06-07T22:05:43,897   reading manifest template 'MANIFEST.in'
2025-06-07T22:05:43,898   warning: no files found matching 'tables/table_*.json'
2025-06-07T22:05:43,899   adding license file 'LICENSE.txt'
2025-06-07T22:05:43,903   writing manifest file 'TD2.egg-info/SOURCES.txt'
2025-06-07T22:05:43,917   copying TD2/tables/table_1.json -> build/lib/TD2/tables
2025-06-07T22:05:43,920   copying TD2/tables/table_2.json -> build/lib/TD2/tables
2025-06-07T22:05:43,922   copying TD2/tables/table_3.json -> build/lib/TD2/tables
2025-06-07T22:05:43,924   copying TD2/tables/table_4.json -> build/lib/TD2/tables
2025-06-07T22:05:43,926   copying TD2/tables/table_5.json -> build/lib/TD2/tables
2025-06-07T22:05:43,928   copying TD2/tables/table_6.json -> build/lib/TD2/tables
2025-06-07T22:05:43,931   copying TD2/tables/table_9.json -> build/lib/TD2/tables
2025-06-07T22:05:43,933   copying TD2/tables/table_10.json -> build/lib/TD2/tables
2025-06-07T22:05:43,935   copying TD2/tables/table_11.json -> build/lib/TD2/tables
2025-06-07T22:05:43,937   copying TD2/tables/table_12.json -> build/lib/TD2/tables
2025-06-07T22:05:43,940   copying TD2/tables/table_13.json -> build/lib/TD2/tables
2025-06-07T22:05:43,942   copying TD2/tables/table_14.json -> build/lib/TD2/tables
2025-06-07T22:05:43,944   copying TD2/tables/table_15.json -> build/lib/TD2/tables
2025-06-07T22:05:43,947   copying TD2/tables/table_16.json -> build/lib/TD2/tables
2025-06-07T22:05:43,950   copying TD2/tables/table_21.json -> build/lib/TD2/tables
2025-06-07T22:05:43,952   copying TD2/tables/table_22.json -> build/lib/TD2/tables
2025-06-07T22:05:43,954   copying TD2/tables/table_23.json -> build/lib/TD2/tables
2025-06-07T22:05:43,956   copying TD2/tables/table_24.json -> build/lib/TD2/tables
2025-06-07T22:05:43,958   copying TD2/tables/table_25.json -> build/lib/TD2/tables
2025-06-07T22:05:43,960   copying TD2/tables/table_26.json -> build/lib/TD2/tables
2025-06-07T22:05:43,963   copying TD2/tables/table_27.json -> build/lib/TD2/tables
2025-06-07T22:05:43,965   copying TD2/tables/table_28.json -> build/lib/TD2/tables
2025-06-07T22:05:43,967   copying TD2/tables/table_29.json -> build/lib/TD2/tables
2025-06-07T22:05:43,969   copying TD2/tables/table_30.json -> build/lib/TD2/tables
2025-06-07T22:05:43,971   copying TD2/tables/table_31.json -> build/lib/TD2/tables
2025-06-07T22:05:43,973   copying TD2/tables/table_33.json -> build/lib/TD2/tables
2025-06-07T22:05:44,014   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2025-06-07T22:05:44,014   !!

2025-06-07T22:05:44,015           ********************************************************************************
2025-06-07T22:05:44,016           Please avoid running ``setup.py`` directly.
2025-06-07T22:05:44,016           Instead, use pypa/build, pypa/installer or other
2025-06-07T22:05:44,017           standards-based tools.

2025-06-07T22:05:44,018           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-06-07T22:05:44,018           or your builds will no longer be supported.

2025-06-07T22:05:44,020           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2025-06-07T22:05:44,020           ********************************************************************************

2025-06-07T22:05:44,021   !!
2025-06-07T22:05:44,022     self.initialize_options()
2025-06-07T22:05:44,041   installing to build/bdist.linux-armv7l/wheel
2025-06-07T22:05:44,041   running install
2025-06-07T22:05:44,065   running install_lib
2025-06-07T22:05:44,091   creating build/bdist.linux-armv7l/wheel
2025-06-07T22:05:44,093   creating build/bdist.linux-armv7l/wheel/tests
2025-06-07T22:05:44,094   copying build/lib/tests/test_translate.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,096   copying build/lib/tests/longorfs_low_memory.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,098   copying build/lib/tests/visualize_mane_composition.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,100   copying build/lib/tests/visualize_chess.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,102   copying build/lib/tests/compare_peps.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,104   copying build/lib/tests/test_find_orfs.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,106   copying build/lib/tests/test_find_orfs_real.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,108   copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,110   copying build/lib/tests/ambiguous_codon_test.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,112   copying build/lib/tests/test_reverse_complement.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,114   copying build/lib/tests/partition_mane.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,116   creating build/bdist.linux-armv7l/wheel/tests/data
2025-06-07T22:05:44,117   copying build/lib/tests/data/__init__.py -> build/bdist.linux-armv7l/wheel/./tests/data
2025-06-07T22:05:44,119   copying build/lib/tests/visualize_benchmark.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-07T22:05:44,121   creating build/bdist.linux-armv7l/wheel/TD2
2025-06-07T22:05:44,122   copying build/lib/TD2/Predict.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-07T22:05:44,125   copying build/lib/TD2/LongOrfs.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-07T22:05:44,129   creating build/bdist.linux-armv7l/wheel/TD2/tables
2025-06-07T22:05:44,130   copying build/lib/TD2/tables/table_12.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,132   copying build/lib/TD2/tables/table_9.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,134   copying build/lib/TD2/tables/table_14.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,136   copying build/lib/TD2/tables/table_2.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,138   copying build/lib/TD2/tables/table_28.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,140   copying build/lib/TD2/tables/table_5.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,142   copying build/lib/TD2/tables/table_15.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,145   copying build/lib/TD2/tables/table_11.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,147   copying build/lib/TD2/tables/table_10.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,148   copying build/lib/TD2/tables/table_26.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,151   copying build/lib/TD2/tables/table_23.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,152   copying build/lib/TD2/tables/__init__.py -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,154   copying build/lib/TD2/tables/table_4.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,156   copying build/lib/TD2/tables/table_31.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,157   copying build/lib/TD2/tables/table_13.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,159   copying build/lib/TD2/tables/table_30.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,161   copying build/lib/TD2/tables/table_24.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,163   copying build/lib/TD2/tables/table_33.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,164   copying build/lib/TD2/tables/table_1.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,166   copying build/lib/TD2/tables/table_3.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,168   copying build/lib/TD2/tables/table_6.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,170   copying build/lib/TD2/tables/table_27.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,171   copying build/lib/TD2/tables/table_22.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,173   copying build/lib/TD2/tables/table_21.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,175   copying build/lib/TD2/tables/table_29.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,177   copying build/lib/TD2/tables/table_16.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,179   copying build/lib/TD2/tables/table_25.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-07T22:05:44,181   copying build/lib/TD2/__init__.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-07T22:05:44,182   copying build/lib/TD2/translator.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-07T22:05:44,184   copying build/lib/TD2/get_tables.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-07T22:05:44,186   copying build/lib/TD2/help.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-07T22:05:44,189   creating build/bdist.linux-armv7l/wheel/api
2025-06-07T22:05:44,190   copying build/lib/api/__init__.py -> build/bdist.linux-armv7l/wheel/./api
2025-06-07T22:05:44,191   running install_egg_info
2025-06-07T22:05:44,224   Copying TD2.egg-info to build/bdist.linux-armv7l/wheel/./TD2-1.0.2-py3.11.egg-info
2025-06-07T22:05:44,235   running install_scripts
2025-06-07T22:05:44,247   creating build/bdist.linux-armv7l/wheel/td2-1.0.2.dist-info/WHEEL
2025-06-07T22:05:44,249   creating '/tmp/pip-wheel-3n_royc0/td2-1.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-06-07T22:05:44,253   adding 'TD2/LongOrfs.py'
2025-06-07T22:05:44,257   adding 'TD2/Predict.py'
2025-06-07T22:05:44,258   adding 'TD2/__init__.py'
2025-06-07T22:05:44,260   adding 'TD2/get_tables.py'
2025-06-07T22:05:44,261   adding 'TD2/help.py'
2025-06-07T22:05:44,263   adding 'TD2/translator.py'
2025-06-07T22:05:44,265   adding 'TD2/tables/__init__.py'
2025-06-07T22:05:44,266   adding 'TD2/tables/table_1.json'
2025-06-07T22:05:44,267   adding 'TD2/tables/table_10.json'
2025-06-07T22:05:44,269   adding 'TD2/tables/table_11.json'
2025-06-07T22:05:44,270   adding 'TD2/tables/table_12.json'
2025-06-07T22:05:44,271   adding 'TD2/tables/table_13.json'
2025-06-07T22:05:44,273   adding 'TD2/tables/table_14.json'
2025-06-07T22:05:44,274   adding 'TD2/tables/table_15.json'
2025-06-07T22:05:44,275   adding 'TD2/tables/table_16.json'
2025-06-07T22:05:44,277   adding 'TD2/tables/table_2.json'
2025-06-07T22:05:44,278   adding 'TD2/tables/table_21.json'
2025-06-07T22:05:44,279   adding 'TD2/tables/table_22.json'
2025-06-07T22:05:44,281   adding 'TD2/tables/table_23.json'
2025-06-07T22:05:44,282   adding 'TD2/tables/table_24.json'
2025-06-07T22:05:44,284   adding 'TD2/tables/table_25.json'
2025-06-07T22:05:44,285   adding 'TD2/tables/table_26.json'
2025-06-07T22:05:44,286   adding 'TD2/tables/table_27.json'
2025-06-07T22:05:44,287   adding 'TD2/tables/table_28.json'
2025-06-07T22:05:44,289   adding 'TD2/tables/table_29.json'
2025-06-07T22:05:44,290   adding 'TD2/tables/table_3.json'
2025-06-07T22:05:44,291   adding 'TD2/tables/table_30.json'
2025-06-07T22:05:44,293   adding 'TD2/tables/table_31.json'
2025-06-07T22:05:44,294   adding 'TD2/tables/table_33.json'
2025-06-07T22:05:44,295   adding 'TD2/tables/table_4.json'
2025-06-07T22:05:44,297   adding 'TD2/tables/table_5.json'
2025-06-07T22:05:44,298   adding 'TD2/tables/table_6.json'
2025-06-07T22:05:44,300   adding 'TD2/tables/table_9.json'
2025-06-07T22:05:44,301   adding 'api/__init__.py'
2025-06-07T22:05:44,303   adding 'td2-1.0.2.dist-info/licenses/LICENSE.txt'
2025-06-07T22:05:44,305   adding 'tests/__init__.py'
2025-06-07T22:05:44,307   adding 'tests/ambiguous_codon_test.py'
2025-06-07T22:05:44,308   adding 'tests/compare_peps.py'
2025-06-07T22:05:44,311   adding 'tests/longorfs_low_memory.py'
2025-06-07T22:05:44,312   adding 'tests/partition_mane.py'
2025-06-07T22:05:44,313   adding 'tests/test_find_orfs.py'
2025-06-07T22:05:44,316   adding 'tests/test_find_orfs_real.py'
2025-06-07T22:05:44,317   adding 'tests/test_reverse_complement.py'
2025-06-07T22:05:44,318   adding 'tests/test_translate.py'
2025-06-07T22:05:44,319   adding 'tests/visualize_benchmark.py'
2025-06-07T22:05:44,321   adding 'tests/visualize_chess.py'
2025-06-07T22:05:44,322   adding 'tests/visualize_mane_composition.py'
2025-06-07T22:05:44,323   adding 'tests/data/__init__.py'
2025-06-07T22:05:44,324   adding 'td2-1.0.2.dist-info/METADATA'
2025-06-07T22:05:44,325   adding 'td2-1.0.2.dist-info/WHEEL'
2025-06-07T22:05:44,326   adding 'td2-1.0.2.dist-info/entry_points.txt'
2025-06-07T22:05:44,327   adding 'td2-1.0.2.dist-info/top_level.txt'
2025-06-07T22:05:44,328   adding 'td2-1.0.2.dist-info/RECORD'
2025-06-07T22:05:44,331   removing build/bdist.linux-armv7l/wheel
2025-06-07T22:05:44,450   Building wheel for td2 (setup.py): finished with status 'done'
2025-06-07T22:05:44,453   Created wheel for td2: filename=td2-1.0.2-py3-none-any.whl size=54966 sha256=94ae7a7132596b9a383262b643caa9c9353ca36fce313b3cd7ad471f5aae0607
2025-06-07T22:05:44,454   Stored in directory: /tmp/pip-ephem-wheel-cache-h8fohqa9/wheels/c0/59/c1/ff67f21c4d8870d477e946c81ba9b80c0cf40af0ca6ee7cf41
2025-06-07T22:05:44,467 Successfully built td2
2025-06-07T22:05:44,471 Removed build tracker: '/tmp/pip-build-tracker-h6j5oy23'