2025-06-08T10:05:00,382 Created temporary directory: /tmp/pip-build-tracker-rjkabn4b
2025-06-08T10:05:00,383 Initialized build tracking at /tmp/pip-build-tracker-rjkabn4b
2025-06-08T10:05:00,384 Created build tracker: /tmp/pip-build-tracker-rjkabn4b
2025-06-08T10:05:00,384 Entered build tracker: /tmp/pip-build-tracker-rjkabn4b
2025-06-08T10:05:00,385 Created temporary directory: /tmp/pip-wheel-nu9ovhon
2025-06-08T10:05:00,389 Created temporary directory: /tmp/pip-ephem-wheel-cache-42o7cvfy
2025-06-08T10:05:00,441 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-06-08T10:05:00,443 2 location(s) to search for versions of multiqc:
2025-06-08T10:05:00,443 * https://pypi.org/simple/multiqc/
2025-06-08T10:05:00,443 * https://www.piwheels.org/simple/multiqc/
2025-06-08T10:05:00,444 Fetching project page and analyzing links: https://pypi.org/simple/multiqc/
2025-06-08T10:05:00,445 Getting page https://pypi.org/simple/multiqc/
2025-06-08T10:05:00,447 Found index url https://pypi.org/simple/
2025-06-08T10:05:00,596 Fetched page https://pypi.org/simple/multiqc/ as application/vnd.pypi.simple.v1+json
2025-06-08T10:05:00,606   Found link https://files.pythonhosted.org/packages/44/ae/59e74780d4c66afbbac9053d2b6b0f12aaef94e4ce92cb00b71a20025098/multiqc-0.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.1
2025-06-08T10:05:00,607   Found link https://files.pythonhosted.org/packages/e9/7c/14ca085189df0aaba25054bf42fe3ceb74bcbee5c271d4c6f9c9c39bf1c0/multiqc-0.2.0.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.2.0
2025-06-08T10:05:00,608   Found link https://files.pythonhosted.org/packages/5d/cd/08627e78e84acc038dcab2ee6403af9eca73b1203fe505645a2c33c316b0/multiqc-0.3.0.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.3.0
2025-06-08T10:05:00,608   Found link https://files.pythonhosted.org/packages/47/bb/3339d0a27891c241de1bcc76122e779b67efad072140224a02e8700e5199/multiqc-0.3.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.3.1
2025-06-08T10:05:00,609   Found link https://files.pythonhosted.org/packages/e5/56/76229fca10700a78fe4a51baf2de7385509a48c7d281f42d9d311a547d76/multiqc-0.3.2.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.3.2
2025-06-08T10:05:00,610   Found link https://files.pythonhosted.org/packages/1c/e0/1e14407025dd461f1917354af543dcd912b669729ce77e0e0d29879d146e/multiqc-0.4.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.4
2025-06-08T10:05:00,610   Found link https://files.pythonhosted.org/packages/08/1c/d9833670aee1303332713f456140730a7a8335cc97bc7aa3c67f37a3b0e1/multiqc-0.5.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.5
2025-06-08T10:05:00,611   Found link https://files.pythonhosted.org/packages/23/d9/95a5e62eea95f220007d7a6683d0da1ee1d9f99e6932bcff793b6601ef15/multiqc-0.6.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.6
2025-06-08T10:05:00,612   Found link https://files.pythonhosted.org/packages/6b/b7/839b0c84448856bd3b2e8c381c4778c4b9c22ded890881d1cd12f9e686fa/multiqc-0.7.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.7
2025-06-08T10:05:00,613   Found link https://files.pythonhosted.org/packages/ab/e4/9a9eea1facbc3dcb7c90e38d3719eea43d4877aa54a887726982f1ba1671/multiqc-0.8.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.8
2025-06-08T10:05:00,613   Found link https://files.pythonhosted.org/packages/ca/7b/b65089cad82caa2618298482c6c80967bb22aca5f64a50df91f0a2888172/multiqc-0.9.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.9
2025-06-08T10:05:00,614   Found link https://files.pythonhosted.org/packages/61/79/92c1b7d04f87bf70405cbcd24ae059abd509b19b13b469934125311dbf9f/multiqc-1.0.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.0
2025-06-08T10:05:00,615   Found link https://files.pythonhosted.org/packages/a0/7c/bb475d750a39917218d48fd592be147bbe47f76f6afaeda84e350bd973fb/multiqc-1.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.1
2025-06-08T10:05:00,615   Found link https://files.pythonhosted.org/packages/7e/c5/5b7e713b892ceadfdb23afe74acd9f246298f880fa96a304276a235422b4/multiqc-1.2.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.2
2025-06-08T10:05:00,616   Found link https://files.pythonhosted.org/packages/2c/af/1183857d4f2ade150fb2e22282ff11e6f5355419d129ca4ee7200022177f/multiqc-1.3.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.3
2025-06-08T10:05:00,617   Found link https://files.pythonhosted.org/packages/af/a1/5c5702c4b0ce9ee6fb7d1c982cc6f20832a85bfce184dcb8178f0bdcb5df/multiqc-1.4.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.4
2025-06-08T10:05:00,617   Found link https://files.pythonhosted.org/packages/fa/3e/fbdcbaebadad2110eed3b4212ced58617cbd9badbfc728c5eabc53916b84/multiqc-1.5.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.5
2025-06-08T10:05:00,618   Found link https://files.pythonhosted.org/packages/0c/00/1fd8c0cc80531bf51a1a2b15928a408b0e8a442a6e59236edc2a76371284/multiqc-1.6.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.6
2025-06-08T10:05:00,619   Found link https://files.pythonhosted.org/packages/6b/c7/817d8ef024866e00625d94bbfa26e7a4131eedc166b3d65d7f54ebc90ed6/multiqc-1.7.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.7
2025-06-08T10:05:00,619   Found link https://files.pythonhosted.org/packages/d3/4b/1cf18ef697e5daa72dfa55d496167354e6ec7d78e87c696a52f338c2dc63/multiqc-1.8.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.8
2025-06-08T10:05:00,620   Found link https://files.pythonhosted.org/packages/c8/2d/f0a6be15f861c5d165726d7afecd823ca158dff530b566379623a0e4534b/multiqc-1.9.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.9
2025-06-08T10:05:00,620   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/35/e5/dfccaa54058f2f5d2a83176bfee12ca65d631dba5dadda2a0c52ce25c45f/multiqc-1.10-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,621   Found link https://files.pythonhosted.org/packages/4e/39/cd87ee0581ead995b561635106d47cc9593687a76db9745a093d09fff1d9/multiqc-1.10.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.10
2025-06-08T10:05:00,622   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/87/80/2e648984b8080fd65cb7c8eaa948a90ce74e8391828e6f7bdd4d0d137242/multiqc-1.10.1-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,622   Found link https://files.pythonhosted.org/packages/ca/e7/549a185924157e427b951ac741c1312ee4b324be9585ad323617bb3077a4/multiqc-1.10.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.10.1
2025-06-08T10:05:00,623   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/2e/2a/4332775300481391ea5a7a1f35406f83f5812a2734eff5987c462c7e1ec7/multiqc-1.11-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,624   Found link https://files.pythonhosted.org/packages/22/23/3f94ffb423762201bcccf0e0cbf821fccf75673a9fedfb3e7c7ea491024d/multiqc-1.11.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.11
2025-06-08T10:05:00,624   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/08/74/23d79b7df154d5742e5b25b9cdf3cc352445290d90c7cc5fb770ba9911a4/multiqc-1.12-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,625   Found link https://files.pythonhosted.org/packages/6a/f0/122025f4521fd085c07d7a706f08819b4c6bed9e62cfe99453f8c5968ab9/multiqc-1.12.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.12
2025-06-08T10:05:00,626   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/1a/37/35f769e2be82ba3760a62a1cb39af42beee5334efa40cc7e151626e03c91/multiqc-1.13-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,626   Found link https://files.pythonhosted.org/packages/7b/cd/cbd2df3bf899f79ec4b20d5807262dfd3b6ce02245e852ece8dcdad250b1/multiqc-1.13.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.13
2025-06-08T10:05:00,627   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/11/4c/0f85a278cd37406f195115e38281478e9933c50f389b7c4d989af42cb9d1/multiqc-1.14-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,627   Found link https://files.pythonhosted.org/packages/ae/bb/3cb9d23ba28eb96a479161230626e3a11a04fc99899ac341ec949bc38bcb/multiqc-1.14.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.14
2025-06-08T10:05:00,628   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/65/cd/ef0884f0abb38c9662b11f212f463cdb022ef504c512719ccf13d4c728eb/multiqc-1.15-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,629   Found link https://files.pythonhosted.org/packages/ff/96/4ea623b57fef48f6b6c0a89757d53f7b4482b1ab950501617177d5c4a979/multiqc-1.15.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.15
2025-06-08T10:05:00,629   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/e0/6b/f6b8380c75a069c079c7b60b17d1cc0ec1c67a3c9623cfe4ee41a73fa9b4/multiqc-1.16-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,630   Found link https://files.pythonhosted.org/packages/36/3d/cc530c0cdd5c9dfd4e197c8147efa69c7da18023e8ef23d6daba4ac4e13c/multiqc-1.16.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.16
2025-06-08T10:05:00,630   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/a1/a5/2ee5d2546f04ef6addd930de9b772a6ee32151d4632319cde64aef822d50/multiqc-1.17-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,631   Found link https://files.pythonhosted.org/packages/e9/0d/2fc684e101ec6ce82ea5c1eaad1a0ab202fd08f50bee5847ef9e8168b7ad/multiqc-1.17.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.17
2025-06-08T10:05:00,632   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/ec/28/0e526e176fde109e06f0409e940e10893bc2e6e7d5cf91a44a3cf8ea214e/multiqc-1.18-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,632   Found link https://files.pythonhosted.org/packages/a5/17/6ed4268d6bc06489add671e5acbb7d429c97b99391b20d964689044cda77/multiqc-1.18.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.18
2025-06-08T10:05:00,633   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/d6/89/c164b49532afaf3308f809de48c519108592d0b204e368dca2a93b1b956b/multiqc-1.19-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,633   Found link https://files.pythonhosted.org/packages/1d/7c/0b3882a0916151b7877faef0f80ca403e1a7f4fc82b875b2dca32cdb8b89/multiqc-1.19.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.19
2025-06-08T10:05:00,634   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/6e/38/ec1edb7d5337c1bf4763e7ef0bb167ce14802742dff618a2fad3f251fb84/multiqc-1.20-py3-none-any.whl (from https://pypi.org/simple/multiqc/)
2025-06-08T10:05:00,635   Found link https://files.pythonhosted.org/packages/8c/c2/6016a7cb33e904a2637da26065a45198f8ed88bc9461d30a177c130360f8/multiqc-1.20.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.20
2025-06-08T10:05:00,635   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/05/93/f3d9efa1c949050e73a504e350a2f399bcc6c7db30e132e7469ce30cc36c/multiqc-1.21-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,636   Found link https://files.pythonhosted.org/packages/d7/4a/69fa3d76fb71a50c3f0f22a5b4d3fd6db3956f631862804f6524b66122d6/multiqc-1.21.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.21
2025-06-08T10:05:00,637   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/81/bc/5780dd13065676e4b1befca4345e18734a71ebc4f11db0cc1b4b3f325c36/multiqc-1.22-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,638   Found link https://files.pythonhosted.org/packages/b4/60/ed18675ca283a2c7469308399789240f31f2f6f340ed192f264993361a83/multiqc-1.22.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.22
2025-06-08T10:05:00,638   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/f6/12/f2dc24575e39d559e759aa02b4fb63d5e1e1a025420d08c497346b229e9c/multiqc-1.22.1-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,639   Found link https://files.pythonhosted.org/packages/6e/fa/2f25f892aaa7ef113f18c546ecdf3439fddd1ab1bfbc2bcd113b9ed2e3b6/multiqc-1.22.1.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.22.1
2025-06-08T10:05:00,640   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/65/b7/e3d91164ae9c94ffea6b66db2cf831a6cdde01880a834449eaaa8dc10e75/multiqc-1.22.2-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,640   Found link https://files.pythonhosted.org/packages/66/cb/0231ed0141cdd68b1dde84027232c0d4aaf4f8ef79187a2de2246e1d83e9/multiqc-1.22.2.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.22.2
2025-06-08T10:05:00,641   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/7f/ac/ab3d945b8b3baf29336797b0e42cead352af0750b793ccb6ac03e0ca5442/multiqc-1.22.3-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,642   Found link https://files.pythonhosted.org/packages/5d/fd/c56e8f84adc8f33f141a21523a2d23f6e4fce5720937e0eef9d11723eb80/multiqc-1.22.3.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.22.3
2025-06-08T10:05:00,642   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/f2/ca/5f71192b9c9e1db785f17be34cfacfbf398ad1d93f0d88c3a7640586db1e/multiqc-1.23-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,643   Found link https://files.pythonhosted.org/packages/56/07/06d03641b939dbcc938241fbe7086064aa230615777604e01d8fd2577800/multiqc-1.23.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.23
2025-06-08T10:05:00,644   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/70/47/ba71ed113c96221ce33113baaeac9d75a21e1dd0b5c76eb378ab6a61f87b/multiqc-1.24-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,644   Found link https://files.pythonhosted.org/packages/11/03/990e857673088ee1f15f846a51a3eeca2fc72d50c9ccde44c0469e9a8ef0/multiqc-1.24.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.24
2025-06-08T10:05:00,645   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/7e/24/fcc170d49a9027441952599ac29c4223c83efb491e6f93f6ed8fca4c7e5c/multiqc-1.24.1-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,646   Found link https://files.pythonhosted.org/packages/08/b0/71b12be41a7fae1dfa8096b57b25a13f2f9e84480e77b38f9c95d1d4436c/multiqc-1.24.1.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.24.1
2025-06-08T10:05:00,646   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/6c/36/5e7b9f4e10f9325a5e50dcebd373925fe4f261ae2180dec86fc815daa7cf/multiqc-1.25-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,647   Found link https://files.pythonhosted.org/packages/8a/b2/46b0635a92b33579c0abeb1444afd0de49b175bf236a43f1935aa4da9ca4/multiqc-1.25.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.25
2025-06-08T10:05:00,648   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/40/6f/b2524a0dca1a65ed2ca4ceb9bdf9384ba4b7ddbc5fcb76ae354491b37fbd/multiqc-1.25.1-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,648   Found link https://files.pythonhosted.org/packages/08/f5/e3c8833de724fd4cabc3c922a2e3279f4f13a9ac8c48bc3832b4c42fc7ac/multiqc-1.25.1.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.25.1
2025-06-08T10:05:00,649   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/d1/d0/050f57307c56518f58225c28a8e3ddbd92323b0b190543b4b930d870ab8c/multiqc-1.25.2-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,650   Found link https://files.pythonhosted.org/packages/b2/5b/f8e27b7b8dc7d9017b7b373762c45b0b1aa1d7ebd1f01e9e65d117c647cf/multiqc-1.25.2.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.25.2
2025-06-08T10:05:00,650   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/87/e1/30230c84e1b86a496e07e5301e68239143c19f75f3dee2efed1a1223a212/multiqc-1.26-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,651   Found link https://files.pythonhosted.org/packages/31/d5/1762e051ad7a90826e45aca598ef32b92276ce1bc304a327a71e30db508e/multiqc-1.26.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.26
2025-06-08T10:05:00,652   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/e3/4b/87e6b0d8b0d88ee7880bc3b73e95f28cdc7e5fd999506f5b15b475eebb42/multiqc-1.27-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,652   Found link https://files.pythonhosted.org/packages/b8/7b/b6fc846140cef9d757bb828d129a30a66e885050f0da29869c9d131c216e/multiqc-1.27.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.27
2025-06-08T10:05:00,653   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/92/ca/88394666859d92576980b9410ea00654b5509861e2cd8530e27339fe2d86/multiqc-1.27.1-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,653   Found link https://files.pythonhosted.org/packages/90/c0/c7205aea44421026b8138c94d3913357978497c4e6518caac68ac19467be/multiqc-1.27.1.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.27.1
2025-06-08T10:05:00,654   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/8d/03/f970adfde9bb2883a694b919498381073cc744f08979032a07534b5defc0/multiqc-1.28-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,655   Found link https://files.pythonhosted.org/packages/2c/ed/a2e1f1a29e30f23040fe41b200fd1651c59ea1803c62c545a29f2d8b1a8c/multiqc-1.28.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.28
2025-06-08T10:05:00,655   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/51/48/79a429425be77a2868b411d57efe614ccde79b6ca6dca748cc5c3bd9f53e/multiqc-1.29-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,656   Found link https://files.pythonhosted.org/packages/b5/2e/aab4973f1c1959162fe88490a5e92770fae689c3daa82ca7cafeb743ebe2/multiqc-1.29.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.29
2025-06-08T10:05:00,657   Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/50/12/309e69a35f36ca1432dbafca3dc81d0f9e4dbca8cf3b7526a62cecf2bd59/multiqc-1.30-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8)
2025-06-08T10:05:00,657   Found link https://files.pythonhosted.org/packages/97/9a/64c17491972ce301c01ea1b908316607b03ab47dd9504cd4a33c87111c43/multiqc-1.30.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.30
2025-06-08T10:05:00,658 Fetching project page and analyzing links: https://www.piwheels.org/simple/multiqc/
2025-06-08T10:05:00,659 Getting page https://www.piwheels.org/simple/multiqc/
2025-06-08T10:05:00,661 Found index url https://www.piwheels.org/simple/
2025-06-08T10:05:00,821 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/multiqc/
2025-06-08T10:05:01,479 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/multiqc/
2025-06-08T10:05:02,654 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/multiqc/
2025-06-08T10:05:04,834 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/multiqc/
2025-06-08T10:05:09,003 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/multiqc/
2025-06-08T10:05:09,172 Could not fetch URL https://www.piwheels.org/simple/multiqc/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/multiqc/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping
2025-06-08T10:05:09,174 Skipping link: not a file: https://www.piwheels.org/simple/multiqc/
2025-06-08T10:05:09,175 Skipping link: not a file: https://pypi.org/simple/multiqc/
2025-06-08T10:05:09,200 Given no hashes to check 1 links for project 'multiqc': discarding no candidates
2025-06-08T10:05:09,202 Collecting multiqc==1.29
2025-06-08T10:05:09,205   Created temporary directory: /tmp/pip-unpack-e5ar3vqw
2025-06-08T10:05:09,527   Downloading multiqc-1.29.tar.gz (4.5 MB)
2025-06-08T10:05:12,425   Added multiqc==1.29 from https://files.pythonhosted.org/packages/b5/2e/aab4973f1c1959162fe88490a5e92770fae689c3daa82ca7cafeb743ebe2/multiqc-1.29.tar.gz to build tracker '/tmp/pip-build-tracker-rjkabn4b'
2025-06-08T10:05:12,438   Created temporary directory: /tmp/pip-build-env-3454cvri
2025-06-08T10:05:12,443   Installing build dependencies: started
2025-06-08T10:05:12,445   Running command pip subprocess to install build dependencies
2025-06-08T10:05:13,588   Using pip 25.2 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2025-06-08T10:05:13,589   Non-user install by explicit request
2025-06-08T10:05:14,037   Created build tracker: /tmp/pip-build-tracker-rjkabn4b
2025-06-08T10:05:14,038   Entered build tracker: /tmp/pip-build-tracker-rjkabn4b
2025-06-08T10:05:14,041   Created temporary directory: /tmp/pip-install-5xfwjwe7
2025-06-08T10:05:14,045   Created temporary directory: /tmp/pip-ephem-wheel-cache-no9mfldb
2025-06-08T10:05:14,096   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-06-08T10:05:14,098   2 location(s) to search for versions of setuptools:
2025-06-08T10:05:14,098   * https://pypi.org/simple/setuptools/
2025-06-08T10:05:14,099   * https://www.piwheels.org/simple/setuptools/
2025-06-08T10:05:14,099   Fetching project page and analyzing links: https://pypi.org/simple/setuptools/
2025-06-08T10:05:14,100   Getting page https://pypi.org/simple/setuptools/
2025-06-08T10:05:14,102   Found index url https://pypi.org/simple/
2025-06-08T10:05:14,104   Looking up "https://pypi.org/simple/setuptools/" in the cache
2025-06-08T10:05:14,105   Request header has "max_age" as 0, cache bypassed
2025-06-08T10:05:14,109   Starting new HTTPS connection (1): pypi.org:443
2025-06-08T10:05:14,254   https://pypi.org:443 "GET /simple/setuptools/ HTTP/1.1" 304 0
2025-06-08T10:05:14,274   Fetched page https://pypi.org/simple/setuptools/ as application/vnd.pypi.simple.v1+json
2025-06-08T10:05:14,432     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/77/38/90cae8fd99c5dc402d25930e1c91f5fcf6de5c8e982fd152a5a061e3df56/setuptools-0.6b1-py2.3.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,433     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/1f/ab/1ed6131b5112d1d47cb89e1cbea08f783f0ed49d6fc795ed2ff63f84d20c/setuptools-0.6b1-py2.4.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,433     Found link https://files.pythonhosted.org/packages/82/cb/906d051fdf1c8b7703d288d3cc44ff32746090378f7f8539c8476a21ce9a/setuptools-0.6b1.zip (from https://pypi.org/simple/setuptools/), version: 0.6b1
2025-06-08T10:05:14,434     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/61/52/c84d22f3669ea8d4e54126f6241d7ed9828e3a382596f170043dfdaddbcc/setuptools-0.6b2-py2.3.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,435     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9b/87/48c155a10c4561fe9b8a83dcf9361ddb9cc9ab5c3ed1b504ac12ab11ed6a/setuptools-0.6b2-py2.4.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,436     Found link https://files.pythonhosted.org/packages/0e/3b/53daeaf6623a2bab3d3c40b19a35ff5bd7c4e1fbad2f537a61c1fe8c5069/setuptools-0.6b2.zip (from https://pypi.org/simple/setuptools/), version: 0.6b2
2025-06-08T10:05:14,437     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/c3/13/a3129905c118a7004e4bbc6db2c24d73de9e15960fd749a61e16fb114f30/setuptools-0.6b3-py2.3.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,437     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/10/b3/7166e400d3b953fa4714f97806f077a3f7791cd48ea71df708814234283a/setuptools-0.6b3-py2.4.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,438     Found link https://files.pythonhosted.org/packages/ff/33/635de67bf3010651ba8db9d8064721274bfb6fbb778a110089f34beabaf2/setuptools-0.6b3.zip (from https://pypi.org/simple/setuptools/), version: 0.6b3
2025-06-08T10:05:14,439     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/1c/d7/6927233caddaa4f466a8b957c94be00810e751edb2655283c04fc3b680f2/setuptools-0.6b4-py2.3.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,440     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/b3/79/8c94b6c99192df5f5d900ce17405cb5cfcdab8643d2e4aaf6ce1ee948576/setuptools-0.6b4-py2.4.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,440     Found link https://files.pythonhosted.org/packages/82/be/b2e51157a4debc4ebcab179aeb839948a0f02ce06cbc7749c8ab866c0aa9/setuptools-0.6b4.zip (from https://pypi.org/simple/setuptools/), version: 0.6b4
2025-06-08T10:05:14,441     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/54/f7/6f443db0df0a1706d8af3a8fa7d18528e5557f588cbddce7f7b47ff08ba5/setuptools-0.6c1-py2.3.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,442     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/59/61/1ab6a87cec11ffb403280338aacc2c7a1e44eff0d7e431076fba1e61895e/setuptools-0.6c1-py2.4.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,443     Found link https://files.pythonhosted.org/packages/4e/2d/555dc3106b42c977a2f7c7e6f28e5b3104c9bd9306005d304d2ddc1c6587/setuptools-0.6c1.zip (from https://pypi.org/simple/setuptools/), version: 0.6c1
2025-06-08T10:05:14,444     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/24/01/51f2d3ede491f51990b99ab0bfc5bad473c9b45fcf9b1c7b8c7bc3ff0e14/setuptools-0.6c2-py2.3.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,444     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/64/c4/cb2718f8851517aba754c4f25d79f2a65430d4a4979375d78ea51f217123/setuptools-0.6c2-py2.4.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,445     Found link https://files.pythonhosted.org/packages/e3/dd/5ccc0dd99d67675bda31bfb1e5be1460f908b9e3e475660bdcb98aea5f36/setuptools-0.6c2.zip (from https://pypi.org/simple/setuptools/), version: 0.6c2
2025-06-08T10:05:14,446     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/21/56/b48e6f7fa5a58e87a3b0761af2bedf2a6668c553ab4c39ee2646ef9597f7/setuptools-0.6c3-py2.3.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,447     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/73/0d/239e2877d84df3231b5da63ff7358871f66eeab89458574247ebe7c427c7/setuptools-0.6c3-py2.4.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,447     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/20/22/7e414402a50a263f15d1d7f0a469ba63aa1f2fb79e653a64732b3b18af48/setuptools-0.6c3-py2.5.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,448     Found link https://files.pythonhosted.org/packages/01/21/d4c5b856d702d0c6e3a615061d0b6e7101c375ceb664126583de863b4181/setuptools-0.6c3.tar.gz (from https://pypi.org/simple/setuptools/), version: 0.6c3
2025-06-08T10:05:14,449     Found link https://files.pythonhosted.org/packages/69/d7/a22dd38ff4811beaaa7089825dc38a34f47818f25c7025b1caab4e67b54b/setuptools-0.6c3.zip (from https://pypi.org/simple/setuptools/), version: 0.6c3
2025-06-08T10:05:14,450     Skipping link: unsupported archive format: .rpm: https://files.pythonhosted.org/packages/4b/02/33240ac22d7dc895c5d18119a7a4b7b97ca45f7436c2633840287c2c7a4e/setuptools-0.6c4-1.src.rpm (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,450     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/35/b8/00453469271120ea64d3c4da218dd83565f5b1d3e848371c13afa43bb58c/setuptools-0.6c4-py2.3.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,451     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/00/5c/53f6b2cbe1f8344695eeb166e1906d573146fcb9f9f9ad116b7c4cf907ca/setuptools-0.6c4-py2.4.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,452     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ad/67/6764874b7091d4b5902de113b30ffc40713c3176908177c53c0ae3129fb9/setuptools-0.6c4-py2.5.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,453     Found link https://files.pythonhosted.org/packages/73/57/a910b32ea2131b5d8f7a2ff106e5a1c47b0cad4baed171ca12ffa5613c39/setuptools-0.6c4.tar.gz (from https://pypi.org/simple/setuptools/), version: 0.6c4
2025-06-08T10:05:14,453     Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/f4/d2/2be204269d952f712b433e9c27dc76b54dd2c3fcc38a085b561614d4a0bd/setuptools-0.6c4.win32-py2.3.exe (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,454     Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/3f/ee/f64f590be21ae82c6de485751596c540c24b218804fe19c1a936109bfec5/setuptools-0.6c4.win32-py2.4.exe (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,455     Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/b3/ee/650a6df344eb5cba091c2729764f44c7fa9309f2421c9518c8509a0b76f8/setuptools-0.6c4.win32-py2.5.exe (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,456     Found link https://files.pythonhosted.org/packages/7e/2d/926f4536e819fa93d7a4aeb0910849387c1234b865310aee40289e457012/setuptools-0.6c4.zip (from https://pypi.org/simple/setuptools/), version: 0.6c4
2025-06-08T10:05:14,456     Skipping link: unsupported archive format: .rpm: https://files.pythonhosted.org/packages/c1/11/efc7f5f5d5d0d7b77030753469ab3173b41d7e92de9de9c384f0f9a3e95d/setuptools-0.6c5-1.src.rpm (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,457     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/b9/32/3797469c91a78e329cb2f73bedddd3a70cf688a91f484f35f65553ae853f/setuptools-0.6c5-py2.3.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,458     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e9/24/31abf427add2d867e16164ac0215f079f8d2a9a3f5fe9153906425b94fc2/setuptools-0.6c5-py2.4.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,459     Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/73/df/f68a5c3acd5e7f813d56cd147d713720ceb4ef7a2064c927c9d77fba2d61/setuptools-0.6c5-py2.5.egg (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,459     Found link https://files.pythonhosted.org/packages/ba/1b/1480b6fef57c0ac946942731467d4d0590b305c4808e0be1b17fd3f5a8c8/setuptools-0.6c5.tar.gz (from https://pypi.org/simple/setuptools/), version: 0.6c5
2025-06-08T10:05:14,460     Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/90/0a/43530fce7c099634d23b29735a590bb38635e97a069493b76d64ad476a7f/setuptools-0.6c5.win32-py2.3.exe (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,461     Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/84/cf/c588fd4bc0310edaf8e9a026447fa4a7210b5079f87aaf753cbe3be15b90/setuptools-0.6c5.win32-py2.4.exe (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,462     Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/06/5f/1f915846c47f2bdc62f96965af5ac5900e1280864c758f3cd64b1dcac58b/setuptools-0.6c5.win32-py2.5.exe (from https://pypi.org/simple/setuptools/)
2025-06-08T10:05:14,462     Found link https://files.pythonhosted.org/packages/bb/55/371d4c3a5b9c696c93746f295dddf43a536c42b32f0df52ee0b2a67f9e1e/setuptools-0.6c5.zip (from https://pypi.org/simple/setuptools/), version: 0.6c5
2025-06-08T10:05:14,463     Skipping link: unsupported archive format: .rpm: https://files.pythonhosted.org/packages/5a/ee/8d3bbe7e760fa9759183ad8b56b8b92b573c5111639e0e740e0e1fd6e20f/setuptools-0.6c6-1.src.rpm (from https://pypi.org/simple/setuptools/)
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2025-06-08T10:05:15,802   Fetching project page and analyzing links: https://www.piwheels.org/simple/setuptools/
2025-06-08T10:05:15,802   Getting page https://www.piwheels.org/simple/setuptools/
2025-06-08T10:05:15,804   Found index url https://www.piwheels.org/simple/
2025-06-08T10:05:15,805   Looking up "https://www.piwheels.org/simple/setuptools/" in the cache
2025-06-08T10:05:15,806   Request header has "max_age" as 0, cache bypassed
2025-06-08T10:05:15,807   No cache entry available
2025-06-08T10:05:15,808   Starting new HTTPS connection (1): www.piwheels.org:443
2025-06-08T10:05:15,962   Incremented Retry for (url='/simple/setuptools/'): Retry(total=4, connect=None, read=None, redirect=None, status=None)
2025-06-08T10:05:15,963   WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/setuptools/
2025-06-08T10:05:15,964   Starting new HTTPS connection (2): www.piwheels.org:443
2025-06-08T10:05:16,121   Incremented Retry for (url='/simple/setuptools/'): Retry(total=3, connect=None, read=None, redirect=None, status=None)
2025-06-08T10:05:16,623   WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/setuptools/
2025-06-08T10:05:16,625   Starting new HTTPS connection (3): www.piwheels.org:443
2025-06-08T10:05:16,794   Incremented Retry for (url='/simple/setuptools/'): Retry(total=2, connect=None, read=None, redirect=None, status=None)
2025-06-08T10:05:17,796   WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/setuptools/
2025-06-08T10:05:17,798   Starting new HTTPS connection (4): www.piwheels.org:443
2025-06-08T10:05:17,966   Incremented Retry for (url='/simple/setuptools/'): Retry(total=1, connect=None, read=None, redirect=None, status=None)
2025-06-08T10:05:19,968   WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/setuptools/
2025-06-08T10:05:19,970   Starting new HTTPS connection (5): www.piwheels.org:443
2025-06-08T10:05:20,137   Incremented Retry for (url='/simple/setuptools/'): Retry(total=0, connect=None, read=None, redirect=None, status=None)
2025-06-08T10:05:24,139   WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/setuptools/
2025-06-08T10:05:24,141   Starting new HTTPS connection (6): www.piwheels.org:443
2025-06-08T10:05:24,322   Could not fetch URL https://www.piwheels.org/simple/setuptools/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/setuptools/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping
2025-06-08T10:05:24,323   Skipping link: not a file: https://www.piwheels.org/simple/setuptools/
2025-06-08T10:05:24,324   Skipping link: not a file: https://pypi.org/simple/setuptools/
2025-06-08T10:05:24,380   Given no hashes to check 1407 links for project 'setuptools': discarding no candidates
2025-06-08T10:05:24,539   Collecting setuptools
2025-06-08T10:05:24,540     Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/a3/dc/17031897dae0efacfea57dfd3a82fdd2a2aeb58e0ff71b77b87e44edc772/setuptools-80.9.0-py3-none-any.whl.metadata
2025-06-08T10:05:24,542     Created temporary directory: /tmp/pip-unpack-h1nqe18p
2025-06-08T10:05:24,544     Looking up "https://files.pythonhosted.org/packages/a3/dc/17031897dae0efacfea57dfd3a82fdd2a2aeb58e0ff71b77b87e44edc772/setuptools-80.9.0-py3-none-any.whl.metadata" in the cache
2025-06-08T10:05:24,548     Current age based on date: 0
2025-06-08T10:05:24,548     Ignoring unknown cache-control directive: immutable
2025-06-08T10:05:24,549     Freshness lifetime from max-age: 365000000
2025-06-08T10:05:24,550     The response is "fresh", returning cached response
2025-06-08T10:05:24,551     365000000 > 0
2025-06-08T10:05:24,553     Using cached setuptools-80.9.0-py3-none-any.whl.metadata (6.6 kB)
2025-06-08T10:05:24,556     Created temporary directory: /tmp/pip-metadata-i6n9dvtc
2025-06-08T10:05:24,602   Created temporary directory: /tmp/pip-unpack-rd6nr47z
2025-06-08T10:05:24,604   Looking up "https://files.pythonhosted.org/packages/a3/dc/17031897dae0efacfea57dfd3a82fdd2a2aeb58e0ff71b77b87e44edc772/setuptools-80.9.0-py3-none-any.whl" in the cache
2025-06-08T10:05:24,607   Current age based on date: 0
2025-06-08T10:05:24,608   Ignoring unknown cache-control directive: immutable
2025-06-08T10:05:24,609   Freshness lifetime from max-age: 365000000
2025-06-08T10:05:24,609   The response is "fresh", returning cached response
2025-06-08T10:05:24,610   365000000 > 0
2025-06-08T10:05:24,612   Using cached setuptools-80.9.0-py3-none-any.whl (1.2 MB)
2025-06-08T10:05:24,635   Downloading link https://files.pythonhosted.org/packages/a3/dc/17031897dae0efacfea57dfd3a82fdd2a2aeb58e0ff71b77b87e44edc772/setuptools-80.9.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.9) to /tmp/pip-unpack-rd6nr47z/setuptools-80.9.0-py3-none-any.whl
2025-06-08T10:05:25,228   Installing collected packages: setuptools
2025-06-08T10:05:26,086   Successfully installed setuptools-80.9.0
2025-06-08T10:05:26,087   Removed build tracker: '/tmp/pip-build-tracker-rjkabn4b'
2025-06-08T10:05:26,298   Installing build dependencies: finished with status 'done'
2025-06-08T10:05:26,301   Getting requirements to build wheel: started
2025-06-08T10:05:26,302   Running command Getting requirements to build wheel
2025-06-08T10:05:27,735   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2025-06-08T10:05:27,735   !!

2025-06-08T10:05:27,736           ********************************************************************************
2025-06-08T10:05:27,737           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2025-06-08T10:05:27,738           By 2026-Feb-18, you need to update your project and remove deprecated calls
2025-06-08T10:05:27,738           or your builds will no longer be supported.

2025-06-08T10:05:27,740           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-08T10:05:27,740           ********************************************************************************

2025-06-08T10:05:27,741   !!
2025-06-08T10:05:27,742     corresp(dist, value, root_dir)
2025-06-08T10:05:28,086   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-08T10:05:28,087   !!

2025-06-08T10:05:28,088           ********************************************************************************
2025-06-08T10:05:28,089           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-08T10:05:28,090           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2025-06-08T10:05:28,091           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-08T10:05:28,092           ********************************************************************************

2025-06-08T10:05:28,093   !!
2025-06-08T10:05:28,094     dist._finalize_license_expression()
2025-06-08T10:05:28,094   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-08T10:05:28,095   !!

2025-06-08T10:05:28,096           ********************************************************************************
2025-06-08T10:05:28,097           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-08T10:05:28,098           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2025-06-08T10:05:28,099           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-08T10:05:28,100           ********************************************************************************

2025-06-08T10:05:28,101   !!
2025-06-08T10:05:28,102     self._finalize_license_expression()
2025-06-08T10:05:28,102   running egg_info
2025-06-08T10:05:28,107   writing multiqc.egg-info/PKG-INFO
2025-06-08T10:05:28,117   writing dependency_links to multiqc.egg-info/dependency_links.txt
2025-06-08T10:05:28,125   writing entry points to multiqc.egg-info/entry_points.txt
2025-06-08T10:05:28,131   writing requirements to multiqc.egg-info/requires.txt
2025-06-08T10:05:28,132   writing top-level names to multiqc.egg-info/top_level.txt
2025-06-08T10:05:28,156   reading manifest file 'multiqc.egg-info/SOURCES.txt'
2025-06-08T10:05:28,288   reading manifest template 'MANIFEST.in'
2025-06-08T10:05:28,705   adding license file 'LICENSE'
2025-06-08T10:05:28,735   writing manifest file 'multiqc.egg-info/SOURCES.txt'
2025-06-08T10:05:28,842   Getting requirements to build wheel: finished with status 'done'
2025-06-08T10:05:28,845   Created temporary directory: /tmp/pip-modern-metadata-djgca3xo
2025-06-08T10:05:28,847   Preparing metadata (pyproject.toml): started
2025-06-08T10:05:28,849   Running command Preparing metadata (pyproject.toml)
2025-06-08T10:05:29,450   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2025-06-08T10:05:29,450   !!

2025-06-08T10:05:29,451           ********************************************************************************
2025-06-08T10:05:29,452           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2025-06-08T10:05:29,453           By 2026-Feb-18, you need to update your project and remove deprecated calls
2025-06-08T10:05:29,453           or your builds will no longer be supported.

2025-06-08T10:05:29,455           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-08T10:05:29,455           ********************************************************************************

2025-06-08T10:05:29,456   !!
2025-06-08T10:05:29,457     corresp(dist, value, root_dir)
2025-06-08T10:05:29,544   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-08T10:05:29,545   !!

2025-06-08T10:05:29,546           ********************************************************************************
2025-06-08T10:05:29,546           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-08T10:05:29,547           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2025-06-08T10:05:29,549           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-08T10:05:29,549           ********************************************************************************

2025-06-08T10:05:29,550   !!
2025-06-08T10:05:29,551     dist._finalize_license_expression()
2025-06-08T10:05:29,552   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-08T10:05:29,552   !!

2025-06-08T10:05:29,554           ********************************************************************************
2025-06-08T10:05:29,554           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-08T10:05:29,555           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2025-06-08T10:05:29,556           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-08T10:05:29,557           ********************************************************************************

2025-06-08T10:05:29,558   !!
2025-06-08T10:05:29,559     self._finalize_license_expression()
2025-06-08T10:05:29,560   running dist_info
2025-06-08T10:05:29,574   creating /tmp/pip-modern-metadata-djgca3xo/multiqc.egg-info
2025-06-08T10:05:29,574   writing /tmp/pip-modern-metadata-djgca3xo/multiqc.egg-info/PKG-INFO
2025-06-08T10:05:29,586   writing dependency_links to /tmp/pip-modern-metadata-djgca3xo/multiqc.egg-info/dependency_links.txt
2025-06-08T10:05:29,594   writing entry points to /tmp/pip-modern-metadata-djgca3xo/multiqc.egg-info/entry_points.txt
2025-06-08T10:05:29,599   writing requirements to /tmp/pip-modern-metadata-djgca3xo/multiqc.egg-info/requires.txt
2025-06-08T10:05:29,601   writing top-level names to /tmp/pip-modern-metadata-djgca3xo/multiqc.egg-info/top_level.txt
2025-06-08T10:05:29,602   writing manifest file '/tmp/pip-modern-metadata-djgca3xo/multiqc.egg-info/SOURCES.txt'
2025-06-08T10:05:29,623   reading manifest file '/tmp/pip-modern-metadata-djgca3xo/multiqc.egg-info/SOURCES.txt'
2025-06-08T10:05:29,625   reading manifest template 'MANIFEST.in'
2025-06-08T10:05:29,976   adding license file 'LICENSE'
2025-06-08T10:05:29,999   writing manifest file '/tmp/pip-modern-metadata-djgca3xo/multiqc.egg-info/SOURCES.txt'
2025-06-08T10:05:30,001   creating '/tmp/pip-modern-metadata-djgca3xo/multiqc-1.29.dist-info'
2025-06-08T10:05:30,140   Preparing metadata (pyproject.toml): finished with status 'done'
2025-06-08T10:05:30,153   Source in /tmp/pip-wheel-nu9ovhon/multiqc_35e3ff9cf1f54d39a537e30f9711f462 has version 1.29, which satisfies requirement multiqc==1.29 from https://files.pythonhosted.org/packages/b5/2e/aab4973f1c1959162fe88490a5e92770fae689c3daa82ca7cafeb743ebe2/multiqc-1.29.tar.gz
2025-06-08T10:05:30,154   Removed multiqc==1.29 from https://files.pythonhosted.org/packages/b5/2e/aab4973f1c1959162fe88490a5e92770fae689c3daa82ca7cafeb743ebe2/multiqc-1.29.tar.gz from build tracker '/tmp/pip-build-tracker-rjkabn4b'
2025-06-08T10:05:30,177 Created temporary directory: /tmp/pip-unpack-6g0adjsd
2025-06-08T10:05:30,178 Created temporary directory: /tmp/pip-unpack-fxzkdykh
2025-06-08T10:05:30,178 Building wheels for collected packages: multiqc
2025-06-08T10:05:30,183   Created temporary directory: /tmp/pip-wheel-vxbvn453
2025-06-08T10:05:30,183   Destination directory: /tmp/pip-wheel-vxbvn453
2025-06-08T10:05:30,186   Building wheel for multiqc (pyproject.toml): started
2025-06-08T10:05:30,187   Running command Building wheel for multiqc (pyproject.toml)
2025-06-08T10:05:30,797   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2025-06-08T10:05:30,798   !!

2025-06-08T10:05:30,799           ********************************************************************************
2025-06-08T10:05:30,800           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2025-06-08T10:05:30,801           By 2026-Feb-18, you need to update your project and remove deprecated calls
2025-06-08T10:05:30,801           or your builds will no longer be supported.

2025-06-08T10:05:30,803           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-08T10:05:30,803           ********************************************************************************

2025-06-08T10:05:30,804   !!
2025-06-08T10:05:30,805     corresp(dist, value, root_dir)
2025-06-08T10:05:30,892   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-08T10:05:30,893   !!

2025-06-08T10:05:30,894           ********************************************************************************
2025-06-08T10:05:30,895           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-08T10:05:30,896           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2025-06-08T10:05:30,897           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-08T10:05:30,898           ********************************************************************************

2025-06-08T10:05:30,899   !!
2025-06-08T10:05:30,899     dist._finalize_license_expression()
2025-06-08T10:05:30,900   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-08T10:05:30,900   !!

2025-06-08T10:05:30,901           ********************************************************************************
2025-06-08T10:05:30,902           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-08T10:05:30,903           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2025-06-08T10:05:30,904           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-08T10:05:30,904           ********************************************************************************

2025-06-08T10:05:30,905   !!
2025-06-08T10:05:30,906     self._finalize_license_expression()
2025-06-08T10:05:30,906   running bdist_wheel
2025-06-08T10:05:30,922   running build
2025-06-08T10:05:30,923   running build_py
2025-06-08T10:05:30,930   creating build/lib/multiqc
2025-06-08T10:05:30,932   copying multiqc/base_module.py -> build/lib/multiqc
2025-06-08T10:05:30,935   copying multiqc/__init__.py -> build/lib/multiqc
2025-06-08T10:05:30,937   copying multiqc/types.py -> build/lib/multiqc
2025-06-08T10:05:30,940   copying multiqc/config.py -> build/lib/multiqc
2025-06-08T10:05:30,942   copying multiqc/multiqc.py -> build/lib/multiqc
2025-06-08T10:05:30,945   copying multiqc/validation.py -> build/lib/multiqc
2025-06-08T10:05:30,948   copying multiqc/report.py -> build/lib/multiqc
2025-06-08T10:05:30,951   copying multiqc/__main__.py -> build/lib/multiqc
2025-06-08T10:05:30,953   copying multiqc/interactive.py -> build/lib/multiqc
2025-06-08T10:05:30,955   running egg_info
2025-06-08T10:05:30,968   writing multiqc.egg-info/PKG-INFO
2025-06-08T10:05:30,981   writing dependency_links to multiqc.egg-info/dependency_links.txt
2025-06-08T10:05:30,990   writing entry points to multiqc.egg-info/entry_points.txt
2025-06-08T10:05:30,995   writing requirements to multiqc.egg-info/requires.txt
2025-06-08T10:05:30,996   writing top-level names to multiqc.egg-info/top_level.txt
2025-06-08T10:05:31,007   reading manifest file 'multiqc.egg-info/SOURCES.txt'
2025-06-08T10:05:31,042   reading manifest template 'MANIFEST.in'
2025-06-08T10:05:31,395   adding license file 'LICENSE'
2025-06-08T10:05:31,423   writing manifest file 'multiqc.egg-info/SOURCES.txt'
2025-06-08T10:05:31,426   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.core' is absent from the `packages` configuration.
2025-06-08T10:05:31,427   !!

2025-06-08T10:05:31,428           ********************************************************************************
2025-06-08T10:05:31,428           ############################
2025-06-08T10:05:31,429           # Package would be ignored #
2025-06-08T10:05:31,429           ############################
2025-06-08T10:05:31,430           Python recognizes 'multiqc.core' as an importable package[^1],
2025-06-08T10:05:31,430           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,432           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,432           package, please make sure that 'multiqc.core' is explicitly added
2025-06-08T10:05:31,433           to the `packages` configuration field.

2025-06-08T10:05:31,434           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,434           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,435           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,436           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,437           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,438           If you don't want 'multiqc.core' to be distributed and are
2025-06-08T10:05:31,438           already explicitly excluding 'multiqc.core' via
2025-06-08T10:05:31,439           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,439           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,439           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,440           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,441           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,442           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,443                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,443                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,443                 directory, all directories are treated like packages.
2025-06-08T10:05:31,444           ********************************************************************************

2025-06-08T10:05:31,445   !!
2025-06-08T10:05:31,445     check.warn(importable)
2025-06-08T10:05:31,446   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.core.special_case_modules' is absent from the `packages` configuration.
2025-06-08T10:05:31,446   !!

2025-06-08T10:05:31,447           ********************************************************************************
2025-06-08T10:05:31,448           ############################
2025-06-08T10:05:31,448           # Package would be ignored #
2025-06-08T10:05:31,449           ############################
2025-06-08T10:05:31,449           Python recognizes 'multiqc.core.special_case_modules' as an importable package[^1],
2025-06-08T10:05:31,449           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,450           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,451           package, please make sure that 'multiqc.core.special_case_modules' is explicitly added
2025-06-08T10:05:31,451           to the `packages` configuration field.

2025-06-08T10:05:31,452           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,453           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,453           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,454           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,455           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,456           If you don't want 'multiqc.core.special_case_modules' to be distributed and are
2025-06-08T10:05:31,456           already explicitly excluding 'multiqc.core.special_case_modules' via
2025-06-08T10:05:31,457           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,457           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,458           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,459           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,460           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,461           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,462                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,462                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,463                 directory, all directories are treated like packages.
2025-06-08T10:05:31,463           ********************************************************************************

2025-06-08T10:05:31,464   !!
2025-06-08T10:05:31,465     check.warn(importable)
2025-06-08T10:05:31,465   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules' is absent from the `packages` configuration.
2025-06-08T10:05:31,466   !!

2025-06-08T10:05:31,466           ********************************************************************************
2025-06-08T10:05:31,467           ############################
2025-06-08T10:05:31,467           # Package would be ignored #
2025-06-08T10:05:31,468           ############################
2025-06-08T10:05:31,468           Python recognizes 'multiqc.modules' as an importable package[^1],
2025-06-08T10:05:31,469           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,470           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,470           package, please make sure that 'multiqc.modules' is explicitly added
2025-06-08T10:05:31,471           to the `packages` configuration field.

2025-06-08T10:05:31,471           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,472           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,472           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,473           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,474           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,475           If you don't want 'multiqc.modules' to be distributed and are
2025-06-08T10:05:31,476           already explicitly excluding 'multiqc.modules' via
2025-06-08T10:05:31,476           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,477           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,477           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,478           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,479           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,481           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,481                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,482                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,483                 directory, all directories are treated like packages.
2025-06-08T10:05:31,483           ********************************************************************************

2025-06-08T10:05:31,484   !!
2025-06-08T10:05:31,485     check.warn(importable)
2025-06-08T10:05:31,485   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.adapterremoval' is absent from the `packages` configuration.
2025-06-08T10:05:31,486   !!

2025-06-08T10:05:31,487           ********************************************************************************
2025-06-08T10:05:31,487           ############################
2025-06-08T10:05:31,488           # Package would be ignored #
2025-06-08T10:05:31,488           ############################
2025-06-08T10:05:31,489           Python recognizes 'multiqc.modules.adapterremoval' as an importable package[^1],
2025-06-08T10:05:31,489           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,490           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,491           package, please make sure that 'multiqc.modules.adapterremoval' is explicitly added
2025-06-08T10:05:31,492           to the `packages` configuration field.

2025-06-08T10:05:31,493           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,493           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,493           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,494           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,495           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,496           If you don't want 'multiqc.modules.adapterremoval' to be distributed and are
2025-06-08T10:05:31,497           already explicitly excluding 'multiqc.modules.adapterremoval' via
2025-06-08T10:05:31,497           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,497           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,498           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,499           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,500           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,501           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,502                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,502                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,503                 directory, all directories are treated like packages.
2025-06-08T10:05:31,503           ********************************************************************************

2025-06-08T10:05:31,504   !!
2025-06-08T10:05:31,505     check.warn(importable)
2025-06-08T10:05:31,505   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.afterqc' is absent from the `packages` configuration.
2025-06-08T10:05:31,506   !!

2025-06-08T10:05:31,507           ********************************************************************************
2025-06-08T10:05:31,507           ############################
2025-06-08T10:05:31,508           # Package would be ignored #
2025-06-08T10:05:31,508           ############################
2025-06-08T10:05:31,509           Python recognizes 'multiqc.modules.afterqc' as an importable package[^1],
2025-06-08T10:05:31,509           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,511           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,511           package, please make sure that 'multiqc.modules.afterqc' is explicitly added
2025-06-08T10:05:31,512           to the `packages` configuration field.

2025-06-08T10:05:31,513           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,513           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,514           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,515           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,516           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,517           If you don't want 'multiqc.modules.afterqc' to be distributed and are
2025-06-08T10:05:31,517           already explicitly excluding 'multiqc.modules.afterqc' via
2025-06-08T10:05:31,518           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,519           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,519           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,521           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,522           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,523           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,524                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,524                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,525                 directory, all directories are treated like packages.
2025-06-08T10:05:31,525           ********************************************************************************

2025-06-08T10:05:31,526   !!
2025-06-08T10:05:31,527     check.warn(importable)
2025-06-08T10:05:31,527   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.anglerfish' is absent from the `packages` configuration.
2025-06-08T10:05:31,528   !!

2025-06-08T10:05:31,529           ********************************************************************************
2025-06-08T10:05:31,529           ############################
2025-06-08T10:05:31,530           # Package would be ignored #
2025-06-08T10:05:31,530           ############################
2025-06-08T10:05:31,531           Python recognizes 'multiqc.modules.anglerfish' as an importable package[^1],
2025-06-08T10:05:31,531           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,532           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,533           package, please make sure that 'multiqc.modules.anglerfish' is explicitly added
2025-06-08T10:05:31,533           to the `packages` configuration field.

2025-06-08T10:05:31,534           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,535           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,535           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,536           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,537           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,539           If you don't want 'multiqc.modules.anglerfish' to be distributed and are
2025-06-08T10:05:31,539           already explicitly excluding 'multiqc.modules.anglerfish' via
2025-06-08T10:05:31,540           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,540           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,541           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,542           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,543           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,544           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,545                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,545                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,545                 directory, all directories are treated like packages.
2025-06-08T10:05:31,546           ********************************************************************************

2025-06-08T10:05:31,547   !!
2025-06-08T10:05:31,547     check.warn(importable)
2025-06-08T10:05:31,548   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.ataqv' is absent from the `packages` configuration.
2025-06-08T10:05:31,548   !!

2025-06-08T10:05:31,549           ********************************************************************************
2025-06-08T10:05:31,550           ############################
2025-06-08T10:05:31,551           # Package would be ignored #
2025-06-08T10:05:31,551           ############################
2025-06-08T10:05:31,551           Python recognizes 'multiqc.modules.ataqv' as an importable package[^1],
2025-06-08T10:05:31,552           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,553           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,553           package, please make sure that 'multiqc.modules.ataqv' is explicitly added
2025-06-08T10:05:31,554           to the `packages` configuration field.

2025-06-08T10:05:31,554           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,555           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,555           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,556           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,557           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,558           If you don't want 'multiqc.modules.ataqv' to be distributed and are
2025-06-08T10:05:31,558           already explicitly excluding 'multiqc.modules.ataqv' via
2025-06-08T10:05:31,559           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,559           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,560           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,561           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,562           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,563           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,564                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,564                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,565                 directory, all directories are treated like packages.
2025-06-08T10:05:31,565           ********************************************************************************

2025-06-08T10:05:31,566   !!
2025-06-08T10:05:31,567     check.warn(importable)
2025-06-08T10:05:31,567   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bakta' is absent from the `packages` configuration.
2025-06-08T10:05:31,568   !!

2025-06-08T10:05:31,569           ********************************************************************************
2025-06-08T10:05:31,569           ############################
2025-06-08T10:05:31,570           # Package would be ignored #
2025-06-08T10:05:31,570           ############################
2025-06-08T10:05:31,571           Python recognizes 'multiqc.modules.bakta' as an importable package[^1],
2025-06-08T10:05:31,571           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,572           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,573           package, please make sure that 'multiqc.modules.bakta' is explicitly added
2025-06-08T10:05:31,574           to the `packages` configuration field.

2025-06-08T10:05:31,575           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,575           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,576           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,577           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,578           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,579           If you don't want 'multiqc.modules.bakta' to be distributed and are
2025-06-08T10:05:31,579           already explicitly excluding 'multiqc.modules.bakta' via
2025-06-08T10:05:31,580           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,580           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,581           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,582           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,583           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,584           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,584                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,585                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,585                 directory, all directories are treated like packages.
2025-06-08T10:05:31,586           ********************************************************************************

2025-06-08T10:05:31,586   !!
2025-06-08T10:05:31,587     check.warn(importable)
2025-06-08T10:05:31,587   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bamdst' is absent from the `packages` configuration.
2025-06-08T10:05:31,588   !!

2025-06-08T10:05:31,589           ********************************************************************************
2025-06-08T10:05:31,589           ############################
2025-06-08T10:05:31,589           # Package would be ignored #
2025-06-08T10:05:31,590           ############################
2025-06-08T10:05:31,590           Python recognizes 'multiqc.modules.bamdst' as an importable package[^1],
2025-06-08T10:05:31,591           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,592           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,592           package, please make sure that 'multiqc.modules.bamdst' is explicitly added
2025-06-08T10:05:31,593           to the `packages` configuration field.

2025-06-08T10:05:31,594           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,594           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,595           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,596           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,597           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,598           If you don't want 'multiqc.modules.bamdst' to be distributed and are
2025-06-08T10:05:31,598           already explicitly excluding 'multiqc.modules.bamdst' via
2025-06-08T10:05:31,599           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,599           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,600           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,601           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,602           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,604           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,604                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,605                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,605                 directory, all directories are treated like packages.
2025-06-08T10:05:31,606           ********************************************************************************

2025-06-08T10:05:31,607   !!
2025-06-08T10:05:31,607     check.warn(importable)
2025-06-08T10:05:31,608   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bamtools' is absent from the `packages` configuration.
2025-06-08T10:05:31,608   !!

2025-06-08T10:05:31,609           ********************************************************************************
2025-06-08T10:05:31,609           ############################
2025-06-08T10:05:31,610           # Package would be ignored #
2025-06-08T10:05:31,610           ############################
2025-06-08T10:05:31,611           Python recognizes 'multiqc.modules.bamtools' as an importable package[^1],
2025-06-08T10:05:31,611           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,612           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,612           package, please make sure that 'multiqc.modules.bamtools' is explicitly added
2025-06-08T10:05:31,613           to the `packages` configuration field.

2025-06-08T10:05:31,613           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,614           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,614           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,615           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,616           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,617           If you don't want 'multiqc.modules.bamtools' to be distributed and are
2025-06-08T10:05:31,618           already explicitly excluding 'multiqc.modules.bamtools' via
2025-06-08T10:05:31,618           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,619           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,619           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,620           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,621           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,623           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,623                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,624                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,624                 directory, all directories are treated like packages.
2025-06-08T10:05:31,624           ********************************************************************************

2025-06-08T10:05:31,625   !!
2025-06-08T10:05:31,626     check.warn(importable)
2025-06-08T10:05:31,626   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bases2fastq' is absent from the `packages` configuration.
2025-06-08T10:05:31,627   !!

2025-06-08T10:05:31,628           ********************************************************************************
2025-06-08T10:05:31,628           ############################
2025-06-08T10:05:31,629           # Package would be ignored #
2025-06-08T10:05:31,629           ############################
2025-06-08T10:05:31,630           Python recognizes 'multiqc.modules.bases2fastq' as an importable package[^1],
2025-06-08T10:05:31,630           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,631           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,632           package, please make sure that 'multiqc.modules.bases2fastq' is explicitly added
2025-06-08T10:05:31,632           to the `packages` configuration field.

2025-06-08T10:05:31,633           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,634           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,634           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,635           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,636           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,637           If you don't want 'multiqc.modules.bases2fastq' to be distributed and are
2025-06-08T10:05:31,637           already explicitly excluding 'multiqc.modules.bases2fastq' via
2025-06-08T10:05:31,638           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,638           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,638           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,639           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,640           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,642           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,642                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,642                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,643                 directory, all directories are treated like packages.
2025-06-08T10:05:31,643           ********************************************************************************

2025-06-08T10:05:31,644   !!
2025-06-08T10:05:31,645     check.warn(importable)
2025-06-08T10:05:31,645   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bbduk' is absent from the `packages` configuration.
2025-06-08T10:05:31,646   !!

2025-06-08T10:05:31,647           ********************************************************************************
2025-06-08T10:05:31,647           ############################
2025-06-08T10:05:31,648           # Package would be ignored #
2025-06-08T10:05:31,648           ############################
2025-06-08T10:05:31,649           Python recognizes 'multiqc.modules.bbduk' as an importable package[^1],
2025-06-08T10:05:31,649           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,650           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,651           package, please make sure that 'multiqc.modules.bbduk' is explicitly added
2025-06-08T10:05:31,651           to the `packages` configuration field.

2025-06-08T10:05:31,652           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,652           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,653           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,654           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,655           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,656           If you don't want 'multiqc.modules.bbduk' to be distributed and are
2025-06-08T10:05:31,657           already explicitly excluding 'multiqc.modules.bbduk' via
2025-06-08T10:05:31,657           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,658           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,658           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,659           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,660           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,662           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,662                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,663                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,663                 directory, all directories are treated like packages.
2025-06-08T10:05:31,664           ********************************************************************************

2025-06-08T10:05:31,665   !!
2025-06-08T10:05:31,665     check.warn(importable)
2025-06-08T10:05:31,665   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bbmap' is absent from the `packages` configuration.
2025-06-08T10:05:31,666   !!

2025-06-08T10:05:31,667           ********************************************************************************
2025-06-08T10:05:31,667           ############################
2025-06-08T10:05:31,668           # Package would be ignored #
2025-06-08T10:05:31,668           ############################
2025-06-08T10:05:31,668           Python recognizes 'multiqc.modules.bbmap' as an importable package[^1],
2025-06-08T10:05:31,669           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,670           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,670           package, please make sure that 'multiqc.modules.bbmap' is explicitly added
2025-06-08T10:05:31,671           to the `packages` configuration field.

2025-06-08T10:05:31,671           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,672           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,672           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,673           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,674           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,675           If you don't want 'multiqc.modules.bbmap' to be distributed and are
2025-06-08T10:05:31,676           already explicitly excluding 'multiqc.modules.bbmap' via
2025-06-08T10:05:31,676           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,677           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,677           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,678           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,680           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,681           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,682                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,682                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,683                 directory, all directories are treated like packages.
2025-06-08T10:05:31,683           ********************************************************************************

2025-06-08T10:05:31,684   !!
2025-06-08T10:05:31,685     check.warn(importable)
2025-06-08T10:05:31,685   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bcftools' is absent from the `packages` configuration.
2025-06-08T10:05:31,686   !!

2025-06-08T10:05:31,687           ********************************************************************************
2025-06-08T10:05:31,687           ############################
2025-06-08T10:05:31,688           # Package would be ignored #
2025-06-08T10:05:31,688           ############################
2025-06-08T10:05:31,689           Python recognizes 'multiqc.modules.bcftools' as an importable package[^1],
2025-06-08T10:05:31,689           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,690           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,691           package, please make sure that 'multiqc.modules.bcftools' is explicitly added
2025-06-08T10:05:31,691           to the `packages` configuration field.

2025-06-08T10:05:31,692           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,692           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,693           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,693           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,694           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,695           If you don't want 'multiqc.modules.bcftools' to be distributed and are
2025-06-08T10:05:31,696           already explicitly excluding 'multiqc.modules.bcftools' via
2025-06-08T10:05:31,696           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,696           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,697           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,698           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,698           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,700           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,700                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,701                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,701                 directory, all directories are treated like packages.
2025-06-08T10:05:31,702           ********************************************************************************

2025-06-08T10:05:31,703   !!
2025-06-08T10:05:31,703     check.warn(importable)
2025-06-08T10:05:31,704   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bcl2fastq' is absent from the `packages` configuration.
2025-06-08T10:05:31,704   !!

2025-06-08T10:05:31,705           ********************************************************************************
2025-06-08T10:05:31,706           ############################
2025-06-08T10:05:31,706           # Package would be ignored #
2025-06-08T10:05:31,706           ############################
2025-06-08T10:05:31,707           Python recognizes 'multiqc.modules.bcl2fastq' as an importable package[^1],
2025-06-08T10:05:31,707           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,709           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,709           package, please make sure that 'multiqc.modules.bcl2fastq' is explicitly added
2025-06-08T10:05:31,710           to the `packages` configuration field.

2025-06-08T10:05:31,711           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,711           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,712           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,712           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,713           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,714           If you don't want 'multiqc.modules.bcl2fastq' to be distributed and are
2025-06-08T10:05:31,715           already explicitly excluding 'multiqc.modules.bcl2fastq' via
2025-06-08T10:05:31,715           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,716           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,717           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,718           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,718           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,720           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,720                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,721                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,721                 directory, all directories are treated like packages.
2025-06-08T10:05:31,722           ********************************************************************************

2025-06-08T10:05:31,722   !!
2025-06-08T10:05:31,723     check.warn(importable)
2025-06-08T10:05:31,723   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bclconvert' is absent from the `packages` configuration.
2025-06-08T10:05:31,724   !!

2025-06-08T10:05:31,725           ********************************************************************************
2025-06-08T10:05:31,725           ############################
2025-06-08T10:05:31,726           # Package would be ignored #
2025-06-08T10:05:31,726           ############################
2025-06-08T10:05:31,727           Python recognizes 'multiqc.modules.bclconvert' as an importable package[^1],
2025-06-08T10:05:31,727           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,728           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,729           package, please make sure that 'multiqc.modules.bclconvert' is explicitly added
2025-06-08T10:05:31,729           to the `packages` configuration field.

2025-06-08T10:05:31,730           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,731           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,731           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,732           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,733           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,734           If you don't want 'multiqc.modules.bclconvert' to be distributed and are
2025-06-08T10:05:31,735           already explicitly excluding 'multiqc.modules.bclconvert' via
2025-06-08T10:05:31,735           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,736           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,736           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,737           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,738           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,740           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,740                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,741                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,741                 directory, all directories are treated like packages.
2025-06-08T10:05:31,742           ********************************************************************************

2025-06-08T10:05:31,743   !!
2025-06-08T10:05:31,743     check.warn(importable)
2025-06-08T10:05:31,744   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.biobambam2' is absent from the `packages` configuration.
2025-06-08T10:05:31,745   !!

2025-06-08T10:05:31,746           ********************************************************************************
2025-06-08T10:05:31,746           ############################
2025-06-08T10:05:31,747           # Package would be ignored #
2025-06-08T10:05:31,747           ############################
2025-06-08T10:05:31,748           Python recognizes 'multiqc.modules.biobambam2' as an importable package[^1],
2025-06-08T10:05:31,748           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,749           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,749           package, please make sure that 'multiqc.modules.biobambam2' is explicitly added
2025-06-08T10:05:31,750           to the `packages` configuration field.

2025-06-08T10:05:31,751           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,751           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,751           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,752           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,753           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,754           If you don't want 'multiqc.modules.biobambam2' to be distributed and are
2025-06-08T10:05:31,755           already explicitly excluding 'multiqc.modules.biobambam2' via
2025-06-08T10:05:31,755           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,756           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,756           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,757           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,758           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,759           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,760                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,760                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,761                 directory, all directories are treated like packages.
2025-06-08T10:05:31,761           ********************************************************************************

2025-06-08T10:05:31,762   !!
2025-06-08T10:05:31,763     check.warn(importable)
2025-06-08T10:05:31,763   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.biobloomtools' is absent from the `packages` configuration.
2025-06-08T10:05:31,764   !!

2025-06-08T10:05:31,765           ********************************************************************************
2025-06-08T10:05:31,765           ############################
2025-06-08T10:05:31,766           # Package would be ignored #
2025-06-08T10:05:31,766           ############################
2025-06-08T10:05:31,767           Python recognizes 'multiqc.modules.biobloomtools' as an importable package[^1],
2025-06-08T10:05:31,767           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,768           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,769           package, please make sure that 'multiqc.modules.biobloomtools' is explicitly added
2025-06-08T10:05:31,769           to the `packages` configuration field.

2025-06-08T10:05:31,770           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,771           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,771           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,772           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,773           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,774           If you don't want 'multiqc.modules.biobloomtools' to be distributed and are
2025-06-08T10:05:31,774           already explicitly excluding 'multiqc.modules.biobloomtools' via
2025-06-08T10:05:31,775           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,775           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,775           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,776           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,777           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,778           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,779                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,779                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,780                 directory, all directories are treated like packages.
2025-06-08T10:05:31,780           ********************************************************************************

2025-06-08T10:05:31,781   !!
2025-06-08T10:05:31,782     check.warn(importable)
2025-06-08T10:05:31,782   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.biscuit' is absent from the `packages` configuration.
2025-06-08T10:05:31,782   !!

2025-06-08T10:05:31,783           ********************************************************************************
2025-06-08T10:05:31,784           ############################
2025-06-08T10:05:31,784           # Package would be ignored #
2025-06-08T10:05:31,785           ############################
2025-06-08T10:05:31,785           Python recognizes 'multiqc.modules.biscuit' as an importable package[^1],
2025-06-08T10:05:31,786           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,787           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,787           package, please make sure that 'multiqc.modules.biscuit' is explicitly added
2025-06-08T10:05:31,788           to the `packages` configuration field.

2025-06-08T10:05:31,789           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,789           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,790           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,791           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,792           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,793           If you don't want 'multiqc.modules.biscuit' to be distributed and are
2025-06-08T10:05:31,793           already explicitly excluding 'multiqc.modules.biscuit' via
2025-06-08T10:05:31,794           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,794           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,795           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,796           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,797           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,798           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,799                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,799                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,800                 directory, all directories are treated like packages.
2025-06-08T10:05:31,801           ********************************************************************************

2025-06-08T10:05:31,801   !!
2025-06-08T10:05:31,802     check.warn(importable)
2025-06-08T10:05:31,802   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bismark' is absent from the `packages` configuration.
2025-06-08T10:05:31,803   !!

2025-06-08T10:05:31,803           ********************************************************************************
2025-06-08T10:05:31,804           ############################
2025-06-08T10:05:31,804           # Package would be ignored #
2025-06-08T10:05:31,805           ############################
2025-06-08T10:05:31,805           Python recognizes 'multiqc.modules.bismark' as an importable package[^1],
2025-06-08T10:05:31,805           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,806           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,807           package, please make sure that 'multiqc.modules.bismark' is explicitly added
2025-06-08T10:05:31,807           to the `packages` configuration field.

2025-06-08T10:05:31,808           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,809           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,809           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,810           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,811           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,812           If you don't want 'multiqc.modules.bismark' to be distributed and are
2025-06-08T10:05:31,812           already explicitly excluding 'multiqc.modules.bismark' via
2025-06-08T10:05:31,813           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,813           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,814           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,815           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,816           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,817           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,818                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,818                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,819                 directory, all directories are treated like packages.
2025-06-08T10:05:31,819           ********************************************************************************

2025-06-08T10:05:31,820   !!
2025-06-08T10:05:31,821     check.warn(importable)
2025-06-08T10:05:31,821   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bowtie1' is absent from the `packages` configuration.
2025-06-08T10:05:31,822   !!

2025-06-08T10:05:31,823           ********************************************************************************
2025-06-08T10:05:31,823           ############################
2025-06-08T10:05:31,823           # Package would be ignored #
2025-06-08T10:05:31,824           ############################
2025-06-08T10:05:31,825           Python recognizes 'multiqc.modules.bowtie1' as an importable package[^1],
2025-06-08T10:05:31,825           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,826           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,826           package, please make sure that 'multiqc.modules.bowtie1' is explicitly added
2025-06-08T10:05:31,827           to the `packages` configuration field.

2025-06-08T10:05:31,828           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,828           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,829           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,830           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,831           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,832           If you don't want 'multiqc.modules.bowtie1' to be distributed and are
2025-06-08T10:05:31,832           already explicitly excluding 'multiqc.modules.bowtie1' via
2025-06-08T10:05:31,833           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,833           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,833           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,834           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,835           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,836           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,837                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,837                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,837                 directory, all directories are treated like packages.
2025-06-08T10:05:31,838           ********************************************************************************

2025-06-08T10:05:31,839   !!
2025-06-08T10:05:31,839     check.warn(importable)
2025-06-08T10:05:31,840   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bowtie2' is absent from the `packages` configuration.
2025-06-08T10:05:31,840   !!

2025-06-08T10:05:31,841           ********************************************************************************
2025-06-08T10:05:31,842           ############################
2025-06-08T10:05:31,842           # Package would be ignored #
2025-06-08T10:05:31,843           ############################
2025-06-08T10:05:31,843           Python recognizes 'multiqc.modules.bowtie2' as an importable package[^1],
2025-06-08T10:05:31,844           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,845           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,845           package, please make sure that 'multiqc.modules.bowtie2' is explicitly added
2025-06-08T10:05:31,846           to the `packages` configuration field.

2025-06-08T10:05:31,847           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,847           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,848           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,849           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,849           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,850           If you don't want 'multiqc.modules.bowtie2' to be distributed and are
2025-06-08T10:05:31,851           already explicitly excluding 'multiqc.modules.bowtie2' via
2025-06-08T10:05:31,851           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,852           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,852           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,853           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,855           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,856           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,856                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,857                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,857                 directory, all directories are treated like packages.
2025-06-08T10:05:31,857           ********************************************************************************

2025-06-08T10:05:31,858   !!
2025-06-08T10:05:31,859     check.warn(importable)
2025-06-08T10:05:31,859   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.busco' is absent from the `packages` configuration.
2025-06-08T10:05:31,859   !!

2025-06-08T10:05:31,860           ********************************************************************************
2025-06-08T10:05:31,861           ############################
2025-06-08T10:05:31,861           # Package would be ignored #
2025-06-08T10:05:31,862           ############################
2025-06-08T10:05:31,862           Python recognizes 'multiqc.modules.busco' as an importable package[^1],
2025-06-08T10:05:31,862           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,863           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,864           package, please make sure that 'multiqc.modules.busco' is explicitly added
2025-06-08T10:05:31,864           to the `packages` configuration field.

2025-06-08T10:05:31,865           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,866           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,866           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,867           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,868           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,869           If you don't want 'multiqc.modules.busco' to be distributed and are
2025-06-08T10:05:31,870           already explicitly excluding 'multiqc.modules.busco' via
2025-06-08T10:05:31,871           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,871           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,872           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,873           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,874           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,876           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,876                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,877                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,877                 directory, all directories are treated like packages.
2025-06-08T10:05:31,878           ********************************************************************************

2025-06-08T10:05:31,879   !!
2025-06-08T10:05:31,879     check.warn(importable)
2025-06-08T10:05:31,880   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.bustools' is absent from the `packages` configuration.
2025-06-08T10:05:31,880   !!

2025-06-08T10:05:31,882           ********************************************************************************
2025-06-08T10:05:31,882           ############################
2025-06-08T10:05:31,883           # Package would be ignored #
2025-06-08T10:05:31,883           ############################
2025-06-08T10:05:31,884           Python recognizes 'multiqc.modules.bustools' as an importable package[^1],
2025-06-08T10:05:31,884           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,885           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,885           package, please make sure that 'multiqc.modules.bustools' is explicitly added
2025-06-08T10:05:31,886           to the `packages` configuration field.

2025-06-08T10:05:31,887           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,887           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,888           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,889           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,889           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,890           If you don't want 'multiqc.modules.bustools' to be distributed and are
2025-06-08T10:05:31,891           already explicitly excluding 'multiqc.modules.bustools' via
2025-06-08T10:05:31,891           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,892           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,892           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,893           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,894           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,896           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,896                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,897                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,897                 directory, all directories are treated like packages.
2025-06-08T10:05:31,898           ********************************************************************************

2025-06-08T10:05:31,899   !!
2025-06-08T10:05:31,899     check.warn(importable)
2025-06-08T10:05:31,900   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.ccs' is absent from the `packages` configuration.
2025-06-08T10:05:31,900   !!

2025-06-08T10:05:31,901           ********************************************************************************
2025-06-08T10:05:31,901           ############################
2025-06-08T10:05:31,902           # Package would be ignored #
2025-06-08T10:05:31,903           ############################
2025-06-08T10:05:31,903           Python recognizes 'multiqc.modules.ccs' as an importable package[^1],
2025-06-08T10:05:31,904           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,905           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,905           package, please make sure that 'multiqc.modules.ccs' is explicitly added
2025-06-08T10:05:31,906           to the `packages` configuration field.

2025-06-08T10:05:31,907           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,907           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,908           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,909           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,910           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,911           If you don't want 'multiqc.modules.ccs' to be distributed and are
2025-06-08T10:05:31,912           already explicitly excluding 'multiqc.modules.ccs' via
2025-06-08T10:05:31,912           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,913           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,913           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,914           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,915           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,916           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,916                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,917                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,917                 directory, all directories are treated like packages.
2025-06-08T10:05:31,918           ********************************************************************************

2025-06-08T10:05:31,918   !!
2025-06-08T10:05:31,919     check.warn(importable)
2025-06-08T10:05:31,919   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.ccs.tests' is absent from the `packages` configuration.
2025-06-08T10:05:31,920   !!

2025-06-08T10:05:31,921           ********************************************************************************
2025-06-08T10:05:31,921           ############################
2025-06-08T10:05:31,922           # Package would be ignored #
2025-06-08T10:05:31,922           ############################
2025-06-08T10:05:31,923           Python recognizes 'multiqc.modules.ccs.tests' as an importable package[^1],
2025-06-08T10:05:31,923           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,924           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,925           package, please make sure that 'multiqc.modules.ccs.tests' is explicitly added
2025-06-08T10:05:31,925           to the `packages` configuration field.

2025-06-08T10:05:31,926           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,926           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,927           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,928           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,929           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,930           If you don't want 'multiqc.modules.ccs.tests' to be distributed and are
2025-06-08T10:05:31,930           already explicitly excluding 'multiqc.modules.ccs.tests' via
2025-06-08T10:05:31,931           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,931           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,932           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,933           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,934           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,935           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,936                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,936                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,936                 directory, all directories are treated like packages.
2025-06-08T10:05:31,937           ********************************************************************************

2025-06-08T10:05:31,938   !!
2025-06-08T10:05:31,938     check.warn(importable)
2025-06-08T10:05:31,939   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.cellranger' is absent from the `packages` configuration.
2025-06-08T10:05:31,940   !!

2025-06-08T10:05:31,940           ********************************************************************************
2025-06-08T10:05:31,941           ############################
2025-06-08T10:05:31,941           # Package would be ignored #
2025-06-08T10:05:31,942           ############################
2025-06-08T10:05:31,942           Python recognizes 'multiqc.modules.cellranger' as an importable package[^1],
2025-06-08T10:05:31,942           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,943           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,944           package, please make sure that 'multiqc.modules.cellranger' is explicitly added
2025-06-08T10:05:31,944           to the `packages` configuration field.

2025-06-08T10:05:31,945           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,945           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,946           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,946           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,947           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,948           If you don't want 'multiqc.modules.cellranger' to be distributed and are
2025-06-08T10:05:31,948           already explicitly excluding 'multiqc.modules.cellranger' via
2025-06-08T10:05:31,949           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,949           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,950           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,951           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,952           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,953           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,953                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,954                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,954                 directory, all directories are treated like packages.
2025-06-08T10:05:31,955           ********************************************************************************

2025-06-08T10:05:31,956   !!
2025-06-08T10:05:31,956     check.warn(importable)
2025-06-08T10:05:31,956   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.cellranger_arc' is absent from the `packages` configuration.
2025-06-08T10:05:31,957   !!

2025-06-08T10:05:31,958           ********************************************************************************
2025-06-08T10:05:31,958           ############################
2025-06-08T10:05:31,959           # Package would be ignored #
2025-06-08T10:05:31,959           ############################
2025-06-08T10:05:31,960           Python recognizes 'multiqc.modules.cellranger_arc' as an importable package[^1],
2025-06-08T10:05:31,960           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,961           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,962           package, please make sure that 'multiqc.modules.cellranger_arc' is explicitly added
2025-06-08T10:05:31,962           to the `packages` configuration field.

2025-06-08T10:05:31,963           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,964           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,964           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,965           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,966           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,967           If you don't want 'multiqc.modules.cellranger_arc' to be distributed and are
2025-06-08T10:05:31,968           already explicitly excluding 'multiqc.modules.cellranger_arc' via
2025-06-08T10:05:31,968           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,969           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,969           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,970           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,971           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,972           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,973                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,973                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,974                 directory, all directories are treated like packages.
2025-06-08T10:05:31,974           ********************************************************************************

2025-06-08T10:05:31,975   !!
2025-06-08T10:05:31,976     check.warn(importable)
2025-06-08T10:05:31,976   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.cellranger_arc.tests' is absent from the `packages` configuration.
2025-06-08T10:05:31,977   !!

2025-06-08T10:05:31,978           ********************************************************************************
2025-06-08T10:05:31,978           ############################
2025-06-08T10:05:31,979           # Package would be ignored #
2025-06-08T10:05:31,979           ############################
2025-06-08T10:05:31,980           Python recognizes 'multiqc.modules.cellranger_arc.tests' as an importable package[^1],
2025-06-08T10:05:31,981           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:31,982           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:31,982           package, please make sure that 'multiqc.modules.cellranger_arc.tests' is explicitly added
2025-06-08T10:05:31,983           to the `packages` configuration field.

2025-06-08T10:05:31,984           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:31,985           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:31,985           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:31,986           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:31,987           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:31,988           If you don't want 'multiqc.modules.cellranger_arc.tests' to be distributed and are
2025-06-08T10:05:31,989           already explicitly excluding 'multiqc.modules.cellranger_arc.tests' via
2025-06-08T10:05:31,989           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:31,990           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:31,990           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:31,991           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:31,992           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:31,994           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:31,994                 even if it does not contain any `.py` files.
2025-06-08T10:05:31,995                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:31,995                 directory, all directories are treated like packages.
2025-06-08T10:05:31,996           ********************************************************************************

2025-06-08T10:05:31,996   !!
2025-06-08T10:05:31,997     check.warn(importable)
2025-06-08T10:05:31,997   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.cells2stats' is absent from the `packages` configuration.
2025-06-08T10:05:31,998   !!

2025-06-08T10:05:31,999           ********************************************************************************
2025-06-08T10:05:31,999           ############################
2025-06-08T10:05:31,999           # Package would be ignored #
2025-06-08T10:05:32,000           ############################
2025-06-08T10:05:32,000           Python recognizes 'multiqc.modules.cells2stats' as an importable package[^1],
2025-06-08T10:05:32,001           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,002           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,002           package, please make sure that 'multiqc.modules.cells2stats' is explicitly added
2025-06-08T10:05:32,003           to the `packages` configuration field.

2025-06-08T10:05:32,004           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,004           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,005           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,005           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,006           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,007           If you don't want 'multiqc.modules.cells2stats' to be distributed and are
2025-06-08T10:05:32,008           already explicitly excluding 'multiqc.modules.cells2stats' via
2025-06-08T10:05:32,008           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,009           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,010           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,010           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,011           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,013           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,013                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,014                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,014                 directory, all directories are treated like packages.
2025-06-08T10:05:32,015           ********************************************************************************

2025-06-08T10:05:32,016   !!
2025-06-08T10:05:32,017     check.warn(importable)
2025-06-08T10:05:32,017   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.checkm' is absent from the `packages` configuration.
2025-06-08T10:05:32,018   !!

2025-06-08T10:05:32,019           ********************************************************************************
2025-06-08T10:05:32,019           ############################
2025-06-08T10:05:32,020           # Package would be ignored #
2025-06-08T10:05:32,020           ############################
2025-06-08T10:05:32,021           Python recognizes 'multiqc.modules.checkm' as an importable package[^1],
2025-06-08T10:05:32,021           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,022           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,023           package, please make sure that 'multiqc.modules.checkm' is explicitly added
2025-06-08T10:05:32,023           to the `packages` configuration field.

2025-06-08T10:05:32,024           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,025           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,025           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,026           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,027           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,028           If you don't want 'multiqc.modules.checkm' to be distributed and are
2025-06-08T10:05:32,028           already explicitly excluding 'multiqc.modules.checkm' via
2025-06-08T10:05:32,029           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,029           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,030           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,031           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,031           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,033           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,033                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,034                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,034                 directory, all directories are treated like packages.
2025-06-08T10:05:32,035           ********************************************************************************

2025-06-08T10:05:32,036   !!
2025-06-08T10:05:32,036     check.warn(importable)
2025-06-08T10:05:32,037   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.checkm2' is absent from the `packages` configuration.
2025-06-08T10:05:32,037   !!

2025-06-08T10:05:32,038           ********************************************************************************
2025-06-08T10:05:32,039           ############################
2025-06-08T10:05:32,039           # Package would be ignored #
2025-06-08T10:05:32,040           ############################
2025-06-08T10:05:32,040           Python recognizes 'multiqc.modules.checkm2' as an importable package[^1],
2025-06-08T10:05:32,041           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,042           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,043           package, please make sure that 'multiqc.modules.checkm2' is explicitly added
2025-06-08T10:05:32,043           to the `packages` configuration field.

2025-06-08T10:05:32,044           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,045           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,045           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,046           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,047           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,048           If you don't want 'multiqc.modules.checkm2' to be distributed and are
2025-06-08T10:05:32,048           already explicitly excluding 'multiqc.modules.checkm2' via
2025-06-08T10:05:32,049           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,049           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,050           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,051           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,052           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,053           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,053                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,054                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,054                 directory, all directories are treated like packages.
2025-06-08T10:05:32,055           ********************************************************************************

2025-06-08T10:05:32,055   !!
2025-06-08T10:05:32,056     check.warn(importable)
2025-06-08T10:05:32,056   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.checkqc' is absent from the `packages` configuration.
2025-06-08T10:05:32,057   !!

2025-06-08T10:05:32,058           ********************************************************************************
2025-06-08T10:05:32,058           ############################
2025-06-08T10:05:32,059           # Package would be ignored #
2025-06-08T10:05:32,059           ############################
2025-06-08T10:05:32,059           Python recognizes 'multiqc.modules.checkqc' as an importable package[^1],
2025-06-08T10:05:32,060           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,061           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,061           package, please make sure that 'multiqc.modules.checkqc' is explicitly added
2025-06-08T10:05:32,062           to the `packages` configuration field.

2025-06-08T10:05:32,063           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,063           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,064           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,065           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,066           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,067           If you don't want 'multiqc.modules.checkqc' to be distributed and are
2025-06-08T10:05:32,067           already explicitly excluding 'multiqc.modules.checkqc' via
2025-06-08T10:05:32,068           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,069           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,069           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,070           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,071           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,073           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,074                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,074                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,075                 directory, all directories are treated like packages.
2025-06-08T10:05:32,076           ********************************************************************************

2025-06-08T10:05:32,077   !!
2025-06-08T10:05:32,077     check.warn(importable)
2025-06-08T10:05:32,078   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.clipandmerge' is absent from the `packages` configuration.
2025-06-08T10:05:32,079   !!

2025-06-08T10:05:32,080           ********************************************************************************
2025-06-08T10:05:32,080           ############################
2025-06-08T10:05:32,081           # Package would be ignored #
2025-06-08T10:05:32,081           ############################
2025-06-08T10:05:32,082           Python recognizes 'multiqc.modules.clipandmerge' as an importable package[^1],
2025-06-08T10:05:32,082           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,083           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,084           package, please make sure that 'multiqc.modules.clipandmerge' is explicitly added
2025-06-08T10:05:32,084           to the `packages` configuration field.

2025-06-08T10:05:32,085           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,086           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,086           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,087           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,088           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,089           If you don't want 'multiqc.modules.clipandmerge' to be distributed and are
2025-06-08T10:05:32,090           already explicitly excluding 'multiqc.modules.clipandmerge' via
2025-06-08T10:05:32,090           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,091           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,091           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,092           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,093           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,095           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,095                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,096                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,096                 directory, all directories are treated like packages.
2025-06-08T10:05:32,097           ********************************************************************************

2025-06-08T10:05:32,098   !!
2025-06-08T10:05:32,099     check.warn(importable)
2025-06-08T10:05:32,099   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.clusterflow' is absent from the `packages` configuration.
2025-06-08T10:05:32,100   !!

2025-06-08T10:05:32,101           ********************************************************************************
2025-06-08T10:05:32,101           ############################
2025-06-08T10:05:32,102           # Package would be ignored #
2025-06-08T10:05:32,102           ############################
2025-06-08T10:05:32,103           Python recognizes 'multiqc.modules.clusterflow' as an importable package[^1],
2025-06-08T10:05:32,104           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,105           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,105           package, please make sure that 'multiqc.modules.clusterflow' is explicitly added
2025-06-08T10:05:32,106           to the `packages` configuration field.

2025-06-08T10:05:32,107           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,108           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,109           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,110           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,111           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,112           If you don't want 'multiqc.modules.clusterflow' to be distributed and are
2025-06-08T10:05:32,113           already explicitly excluding 'multiqc.modules.clusterflow' via
2025-06-08T10:05:32,113           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,114           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,114           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,115           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,116           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,117           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,118                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,118                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,119                 directory, all directories are treated like packages.
2025-06-08T10:05:32,119           ********************************************************************************

2025-06-08T10:05:32,120   !!
2025-06-08T10:05:32,121     check.warn(importable)
2025-06-08T10:05:32,121   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.conpair' is absent from the `packages` configuration.
2025-06-08T10:05:32,121   !!

2025-06-08T10:05:32,122           ********************************************************************************
2025-06-08T10:05:32,123           ############################
2025-06-08T10:05:32,123           # Package would be ignored #
2025-06-08T10:05:32,124           ############################
2025-06-08T10:05:32,124           Python recognizes 'multiqc.modules.conpair' as an importable package[^1],
2025-06-08T10:05:32,125           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,126           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,126           package, please make sure that 'multiqc.modules.conpair' is explicitly added
2025-06-08T10:05:32,127           to the `packages` configuration field.

2025-06-08T10:05:32,128           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,128           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,129           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,129           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,130           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,131           If you don't want 'multiqc.modules.conpair' to be distributed and are
2025-06-08T10:05:32,132           already explicitly excluding 'multiqc.modules.conpair' via
2025-06-08T10:05:32,132           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,133           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,133           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,134           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,135           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,136           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,137                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,137                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,138                 directory, all directories are treated like packages.
2025-06-08T10:05:32,139           ********************************************************************************

2025-06-08T10:05:32,140   !!
2025-06-08T10:05:32,140     check.warn(importable)
2025-06-08T10:05:32,141   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.cutadapt' is absent from the `packages` configuration.
2025-06-08T10:05:32,141   !!

2025-06-08T10:05:32,142           ********************************************************************************
2025-06-08T10:05:32,142           ############################
2025-06-08T10:05:32,143           # Package would be ignored #
2025-06-08T10:05:32,143           ############################
2025-06-08T10:05:32,143           Python recognizes 'multiqc.modules.cutadapt' as an importable package[^1],
2025-06-08T10:05:32,144           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,145           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,145           package, please make sure that 'multiqc.modules.cutadapt' is explicitly added
2025-06-08T10:05:32,145           to the `packages` configuration field.

2025-06-08T10:05:32,146           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,147           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,147           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,148           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,149           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,150           If you don't want 'multiqc.modules.cutadapt' to be distributed and are
2025-06-08T10:05:32,150           already explicitly excluding 'multiqc.modules.cutadapt' via
2025-06-08T10:05:32,151           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,151           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,152           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,153           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,153           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,155           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,155                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,156                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,156                 directory, all directories are treated like packages.
2025-06-08T10:05:32,157           ********************************************************************************

2025-06-08T10:05:32,157   !!
2025-06-08T10:05:32,158     check.warn(importable)
2025-06-08T10:05:32,158   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.damageprofiler' is absent from the `packages` configuration.
2025-06-08T10:05:32,159   !!

2025-06-08T10:05:32,160           ********************************************************************************
2025-06-08T10:05:32,160           ############################
2025-06-08T10:05:32,161           # Package would be ignored #
2025-06-08T10:05:32,161           ############################
2025-06-08T10:05:32,162           Python recognizes 'multiqc.modules.damageprofiler' as an importable package[^1],
2025-06-08T10:05:32,162           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,163           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,164           package, please make sure that 'multiqc.modules.damageprofiler' is explicitly added
2025-06-08T10:05:32,164           to the `packages` configuration field.

2025-06-08T10:05:32,165           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,165           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,166           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,167           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,167           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,168           If you don't want 'multiqc.modules.damageprofiler' to be distributed and are
2025-06-08T10:05:32,169           already explicitly excluding 'multiqc.modules.damageprofiler' via
2025-06-08T10:05:32,169           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,170           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,170           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,171           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,172           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,173           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,174                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,174                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,175                 directory, all directories are treated like packages.
2025-06-08T10:05:32,175           ********************************************************************************

2025-06-08T10:05:32,176   !!
2025-06-08T10:05:32,177     check.warn(importable)
2025-06-08T10:05:32,177   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.dedup' is absent from the `packages` configuration.
2025-06-08T10:05:32,178   !!

2025-06-08T10:05:32,179           ********************************************************************************
2025-06-08T10:05:32,179           ############################
2025-06-08T10:05:32,180           # Package would be ignored #
2025-06-08T10:05:32,180           ############################
2025-06-08T10:05:32,181           Python recognizes 'multiqc.modules.dedup' as an importable package[^1],
2025-06-08T10:05:32,181           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,182           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,183           package, please make sure that 'multiqc.modules.dedup' is explicitly added
2025-06-08T10:05:32,183           to the `packages` configuration field.

2025-06-08T10:05:32,185           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,185           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,186           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,187           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,188           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,189           If you don't want 'multiqc.modules.dedup' to be distributed and are
2025-06-08T10:05:32,190           already explicitly excluding 'multiqc.modules.dedup' via
2025-06-08T10:05:32,190           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,191           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,191           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,192           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,193           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,194           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,195                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,195                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,196                 directory, all directories are treated like packages.
2025-06-08T10:05:32,196           ********************************************************************************

2025-06-08T10:05:32,197   !!
2025-06-08T10:05:32,197     check.warn(importable)
2025-06-08T10:05:32,198   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.deeptools' is absent from the `packages` configuration.
2025-06-08T10:05:32,198   !!

2025-06-08T10:05:32,199           ********************************************************************************
2025-06-08T10:05:32,200           ############################
2025-06-08T10:05:32,200           # Package would be ignored #
2025-06-08T10:05:32,201           ############################
2025-06-08T10:05:32,201           Python recognizes 'multiqc.modules.deeptools' as an importable package[^1],
2025-06-08T10:05:32,201           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,202           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,203           package, please make sure that 'multiqc.modules.deeptools' is explicitly added
2025-06-08T10:05:32,203           to the `packages` configuration field.

2025-06-08T10:05:32,204           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,205           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,205           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,206           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,207           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,208           If you don't want 'multiqc.modules.deeptools' to be distributed and are
2025-06-08T10:05:32,209           already explicitly excluding 'multiqc.modules.deeptools' via
2025-06-08T10:05:32,209           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,210           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,210           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,211           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,213           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,214           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,215                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,216                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,216                 directory, all directories are treated like packages.
2025-06-08T10:05:32,217           ********************************************************************************

2025-06-08T10:05:32,218   !!
2025-06-08T10:05:32,219     check.warn(importable)
2025-06-08T10:05:32,219   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.diamond' is absent from the `packages` configuration.
2025-06-08T10:05:32,220   !!

2025-06-08T10:05:32,221           ********************************************************************************
2025-06-08T10:05:32,221           ############################
2025-06-08T10:05:32,222           # Package would be ignored #
2025-06-08T10:05:32,223           ############################
2025-06-08T10:05:32,224           Python recognizes 'multiqc.modules.diamond' as an importable package[^1],
2025-06-08T10:05:32,224           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,225           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,226           package, please make sure that 'multiqc.modules.diamond' is explicitly added
2025-06-08T10:05:32,227           to the `packages` configuration field.

2025-06-08T10:05:32,228           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,228           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,229           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,230           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,231           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,232           If you don't want 'multiqc.modules.diamond' to be distributed and are
2025-06-08T10:05:32,232           already explicitly excluding 'multiqc.modules.diamond' via
2025-06-08T10:05:32,233           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,233           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,234           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,235           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,236           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,237           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,238                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,238                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,239                 directory, all directories are treated like packages.
2025-06-08T10:05:32,239           ********************************************************************************

2025-06-08T10:05:32,240   !!
2025-06-08T10:05:32,241     check.warn(importable)
2025-06-08T10:05:32,241   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.disambiguate' is absent from the `packages` configuration.
2025-06-08T10:05:32,242   !!

2025-06-08T10:05:32,243           ********************************************************************************
2025-06-08T10:05:32,243           ############################
2025-06-08T10:05:32,244           # Package would be ignored #
2025-06-08T10:05:32,245           ############################
2025-06-08T10:05:32,245           Python recognizes 'multiqc.modules.disambiguate' as an importable package[^1],
2025-06-08T10:05:32,246           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,247           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,247           package, please make sure that 'multiqc.modules.disambiguate' is explicitly added
2025-06-08T10:05:32,248           to the `packages` configuration field.

2025-06-08T10:05:32,249           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,249           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,250           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,251           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,252           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,253           If you don't want 'multiqc.modules.disambiguate' to be distributed and are
2025-06-08T10:05:32,254           already explicitly excluding 'multiqc.modules.disambiguate' via
2025-06-08T10:05:32,254           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,255           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,255           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,256           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,257           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,258           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,259                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,259                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,260                 directory, all directories are treated like packages.
2025-06-08T10:05:32,260           ********************************************************************************

2025-06-08T10:05:32,261   !!
2025-06-08T10:05:32,262     check.warn(importable)
2025-06-08T10:05:32,262   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.dragen' is absent from the `packages` configuration.
2025-06-08T10:05:32,263   !!

2025-06-08T10:05:32,264           ********************************************************************************
2025-06-08T10:05:32,264           ############################
2025-06-08T10:05:32,265           # Package would be ignored #
2025-06-08T10:05:32,265           ############################
2025-06-08T10:05:32,266           Python recognizes 'multiqc.modules.dragen' as an importable package[^1],
2025-06-08T10:05:32,266           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,267           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,268           package, please make sure that 'multiqc.modules.dragen' is explicitly added
2025-06-08T10:05:32,268           to the `packages` configuration field.

2025-06-08T10:05:32,269           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,270           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,271           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,272           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,273           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,274           If you don't want 'multiqc.modules.dragen' to be distributed and are
2025-06-08T10:05:32,274           already explicitly excluding 'multiqc.modules.dragen' via
2025-06-08T10:05:32,275           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,275           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,276           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,277           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,278           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,279           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,280                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,280                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,281                 directory, all directories are treated like packages.
2025-06-08T10:05:32,281           ********************************************************************************

2025-06-08T10:05:32,282   !!
2025-06-08T10:05:32,283     check.warn(importable)
2025-06-08T10:05:32,283   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.dragen.tests' is absent from the `packages` configuration.
2025-06-08T10:05:32,284   !!

2025-06-08T10:05:32,285           ********************************************************************************
2025-06-08T10:05:32,285           ############################
2025-06-08T10:05:32,285           # Package would be ignored #
2025-06-08T10:05:32,286           ############################
2025-06-08T10:05:32,286           Python recognizes 'multiqc.modules.dragen.tests' as an importable package[^1],
2025-06-08T10:05:32,287           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,288           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,288           package, please make sure that 'multiqc.modules.dragen.tests' is explicitly added
2025-06-08T10:05:32,289           to the `packages` configuration field.

2025-06-08T10:05:32,289           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,290           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,290           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,291           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,292           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,293           If you don't want 'multiqc.modules.dragen.tests' to be distributed and are
2025-06-08T10:05:32,294           already explicitly excluding 'multiqc.modules.dragen.tests' via
2025-06-08T10:05:32,294           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,294           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,295           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,296           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,297           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,299           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,300                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,300                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,301                 directory, all directories are treated like packages.
2025-06-08T10:05:32,301           ********************************************************************************

2025-06-08T10:05:32,303   !!
2025-06-08T10:05:32,303     check.warn(importable)
2025-06-08T10:05:32,304   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.dragen_fastqc' is absent from the `packages` configuration.
2025-06-08T10:05:32,304   !!

2025-06-08T10:05:32,305           ********************************************************************************
2025-06-08T10:05:32,306           ############################
2025-06-08T10:05:32,306           # Package would be ignored #
2025-06-08T10:05:32,307           ############################
2025-06-08T10:05:32,308           Python recognizes 'multiqc.modules.dragen_fastqc' as an importable package[^1],
2025-06-08T10:05:32,309           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,310           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,311           package, please make sure that 'multiqc.modules.dragen_fastqc' is explicitly added
2025-06-08T10:05:32,312           to the `packages` configuration field.

2025-06-08T10:05:32,313           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,314           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,315           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,316           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,317           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,318           If you don't want 'multiqc.modules.dragen_fastqc' to be distributed and are
2025-06-08T10:05:32,318           already explicitly excluding 'multiqc.modules.dragen_fastqc' via
2025-06-08T10:05:32,319           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,319           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,320           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,321           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,322           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,323           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,324                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,324                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,325                 directory, all directories are treated like packages.
2025-06-08T10:05:32,325           ********************************************************************************

2025-06-08T10:05:32,326   !!
2025-06-08T10:05:32,327     check.warn(importable)
2025-06-08T10:05:32,327   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.dragen_fastqc.assets.js' is absent from the `packages` configuration.
2025-06-08T10:05:32,328   !!

2025-06-08T10:05:32,329           ********************************************************************************
2025-06-08T10:05:32,329           ############################
2025-06-08T10:05:32,330           # Package would be ignored #
2025-06-08T10:05:32,330           ############################
2025-06-08T10:05:32,331           Python recognizes 'multiqc.modules.dragen_fastqc.assets.js' as an importable package[^1],
2025-06-08T10:05:32,331           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,332           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,333           package, please make sure that 'multiqc.modules.dragen_fastqc.assets.js' is explicitly added
2025-06-08T10:05:32,333           to the `packages` configuration field.

2025-06-08T10:05:32,334           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,335           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,335           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,336           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,337           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,338           If you don't want 'multiqc.modules.dragen_fastqc.assets.js' to be distributed and are
2025-06-08T10:05:32,339           already explicitly excluding 'multiqc.modules.dragen_fastqc.assets.js' via
2025-06-08T10:05:32,339           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,340           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,340           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,341           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,342           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,344           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,345                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,345                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,346                 directory, all directories are treated like packages.
2025-06-08T10:05:32,346           ********************************************************************************

2025-06-08T10:05:32,347   !!
2025-06-08T10:05:32,347     check.warn(importable)
2025-06-08T10:05:32,348   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.eigenstratdatabasetools' is absent from the `packages` configuration.
2025-06-08T10:05:32,348   !!

2025-06-08T10:05:32,349           ********************************************************************************
2025-06-08T10:05:32,349           ############################
2025-06-08T10:05:32,350           # Package would be ignored #
2025-06-08T10:05:32,350           ############################
2025-06-08T10:05:32,351           Python recognizes 'multiqc.modules.eigenstratdatabasetools' as an importable package[^1],
2025-06-08T10:05:32,351           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,352           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,353           package, please make sure that 'multiqc.modules.eigenstratdatabasetools' is explicitly added
2025-06-08T10:05:32,353           to the `packages` configuration field.

2025-06-08T10:05:32,354           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,354           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,355           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,356           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,357           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,358           If you don't want 'multiqc.modules.eigenstratdatabasetools' to be distributed and are
2025-06-08T10:05:32,358           already explicitly excluding 'multiqc.modules.eigenstratdatabasetools' via
2025-06-08T10:05:32,359           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,359           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,360           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,361           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,362           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,363           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,364                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,364                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,365                 directory, all directories are treated like packages.
2025-06-08T10:05:32,365           ********************************************************************************

2025-06-08T10:05:32,366   !!
2025-06-08T10:05:32,367     check.warn(importable)
2025-06-08T10:05:32,367   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.fastp' is absent from the `packages` configuration.
2025-06-08T10:05:32,368   !!

2025-06-08T10:05:32,369           ********************************************************************************
2025-06-08T10:05:32,370           ############################
2025-06-08T10:05:32,370           # Package would be ignored #
2025-06-08T10:05:32,371           ############################
2025-06-08T10:05:32,371           Python recognizes 'multiqc.modules.fastp' as an importable package[^1],
2025-06-08T10:05:32,372           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,373           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,373           package, please make sure that 'multiqc.modules.fastp' is explicitly added
2025-06-08T10:05:32,374           to the `packages` configuration field.

2025-06-08T10:05:32,374           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,375           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,375           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,376           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,377           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,378           If you don't want 'multiqc.modules.fastp' to be distributed and are
2025-06-08T10:05:32,378           already explicitly excluding 'multiqc.modules.fastp' via
2025-06-08T10:05:32,379           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,379           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,380           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,381           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,382           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,383           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,384                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,384                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,384                 directory, all directories are treated like packages.
2025-06-08T10:05:32,385           ********************************************************************************

2025-06-08T10:05:32,386   !!
2025-06-08T10:05:32,386     check.warn(importable)
2025-06-08T10:05:32,387   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.fastq_screen' is absent from the `packages` configuration.
2025-06-08T10:05:32,387   !!

2025-06-08T10:05:32,388           ********************************************************************************
2025-06-08T10:05:32,389           ############################
2025-06-08T10:05:32,390           # Package would be ignored #
2025-06-08T10:05:32,390           ############################
2025-06-08T10:05:32,391           Python recognizes 'multiqc.modules.fastq_screen' as an importable package[^1],
2025-06-08T10:05:32,391           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,392           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,393           package, please make sure that 'multiqc.modules.fastq_screen' is explicitly added
2025-06-08T10:05:32,393           to the `packages` configuration field.

2025-06-08T10:05:32,394           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,395           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,395           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,396           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,397           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,398           If you don't want 'multiqc.modules.fastq_screen' to be distributed and are
2025-06-08T10:05:32,399           already explicitly excluding 'multiqc.modules.fastq_screen' via
2025-06-08T10:05:32,399           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,400           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,400           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,401           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,402           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,403           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,404                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,404                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,404                 directory, all directories are treated like packages.
2025-06-08T10:05:32,405           ********************************************************************************

2025-06-08T10:05:32,406   !!
2025-06-08T10:05:32,406     check.warn(importable)
2025-06-08T10:05:32,407   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.fastqc' is absent from the `packages` configuration.
2025-06-08T10:05:32,407   !!

2025-06-08T10:05:32,408           ********************************************************************************
2025-06-08T10:05:32,409           ############################
2025-06-08T10:05:32,409           # Package would be ignored #
2025-06-08T10:05:32,410           ############################
2025-06-08T10:05:32,410           Python recognizes 'multiqc.modules.fastqc' as an importable package[^1],
2025-06-08T10:05:32,411           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,412           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,412           package, please make sure that 'multiqc.modules.fastqc' is explicitly added
2025-06-08T10:05:32,413           to the `packages` configuration field.

2025-06-08T10:05:32,414           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,415           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,415           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,416           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,417           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,418           If you don't want 'multiqc.modules.fastqc' to be distributed and are
2025-06-08T10:05:32,419           already explicitly excluding 'multiqc.modules.fastqc' via
2025-06-08T10:05:32,419           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,420           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,420           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,421           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,422           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,424           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,425                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,425                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,426                 directory, all directories are treated like packages.
2025-06-08T10:05:32,426           ********************************************************************************

2025-06-08T10:05:32,427   !!
2025-06-08T10:05:32,428     check.warn(importable)
2025-06-08T10:05:32,429   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.fastqc.assets.css' is absent from the `packages` configuration.
2025-06-08T10:05:32,430   !!

2025-06-08T10:05:32,431           ********************************************************************************
2025-06-08T10:05:32,431           ############################
2025-06-08T10:05:32,431           # Package would be ignored #
2025-06-08T10:05:32,432           ############################
2025-06-08T10:05:32,432           Python recognizes 'multiqc.modules.fastqc.assets.css' as an importable package[^1],
2025-06-08T10:05:32,433           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,434           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,434           package, please make sure that 'multiqc.modules.fastqc.assets.css' is explicitly added
2025-06-08T10:05:32,435           to the `packages` configuration field.

2025-06-08T10:05:32,436           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,436           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,436           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,437           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,438           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,439           If you don't want 'multiqc.modules.fastqc.assets.css' to be distributed and are
2025-06-08T10:05:32,440           already explicitly excluding 'multiqc.modules.fastqc.assets.css' via
2025-06-08T10:05:32,440           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,441           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,441           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,442           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,444           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,445           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,446                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,446                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,447                 directory, all directories are treated like packages.
2025-06-08T10:05:32,447           ********************************************************************************

2025-06-08T10:05:32,448   !!
2025-06-08T10:05:32,449     check.warn(importable)
2025-06-08T10:05:32,449   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.fastqc.assets.js' is absent from the `packages` configuration.
2025-06-08T10:05:32,450   !!

2025-06-08T10:05:32,451           ********************************************************************************
2025-06-08T10:05:32,452           ############################
2025-06-08T10:05:32,452           # Package would be ignored #
2025-06-08T10:05:32,453           ############################
2025-06-08T10:05:32,453           Python recognizes 'multiqc.modules.fastqc.assets.js' as an importable package[^1],
2025-06-08T10:05:32,454           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,455           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,455           package, please make sure that 'multiqc.modules.fastqc.assets.js' is explicitly added
2025-06-08T10:05:32,456           to the `packages` configuration field.

2025-06-08T10:05:32,457           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,458           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,459           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,460           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,461           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,462           If you don't want 'multiqc.modules.fastqc.assets.js' to be distributed and are
2025-06-08T10:05:32,462           already explicitly excluding 'multiqc.modules.fastqc.assets.js' via
2025-06-08T10:05:32,463           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,463           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,464           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,464           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,465           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,467           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,467                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,468                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,468                 directory, all directories are treated like packages.
2025-06-08T10:05:32,469           ********************************************************************************

2025-06-08T10:05:32,470   !!
2025-06-08T10:05:32,470     check.warn(importable)
2025-06-08T10:05:32,471   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.fastqc.fastqc_theoretical_gc' is absent from the `packages` configuration.
2025-06-08T10:05:32,471   !!

2025-06-08T10:05:32,472           ********************************************************************************
2025-06-08T10:05:32,473           ############################
2025-06-08T10:05:32,473           # Package would be ignored #
2025-06-08T10:05:32,474           ############################
2025-06-08T10:05:32,475           Python recognizes 'multiqc.modules.fastqc.fastqc_theoretical_gc' as an importable package[^1],
2025-06-08T10:05:32,475           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,476           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,477           package, please make sure that 'multiqc.modules.fastqc.fastqc_theoretical_gc' is explicitly added
2025-06-08T10:05:32,477           to the `packages` configuration field.

2025-06-08T10:05:32,478           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,479           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,479           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,480           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,481           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,483           If you don't want 'multiqc.modules.fastqc.fastqc_theoretical_gc' to be distributed and are
2025-06-08T10:05:32,483           already explicitly excluding 'multiqc.modules.fastqc.fastqc_theoretical_gc' via
2025-06-08T10:05:32,484           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,484           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,485           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,486           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,487           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,489           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,489                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,490                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,490                 directory, all directories are treated like packages.
2025-06-08T10:05:32,491           ********************************************************************************

2025-06-08T10:05:32,491   !!
2025-06-08T10:05:32,492     check.warn(importable)
2025-06-08T10:05:32,492   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.featurecounts' is absent from the `packages` configuration.
2025-06-08T10:05:32,493   !!

2025-06-08T10:05:32,494           ********************************************************************************
2025-06-08T10:05:32,494           ############################
2025-06-08T10:05:32,495           # Package would be ignored #
2025-06-08T10:05:32,495           ############################
2025-06-08T10:05:32,496           Python recognizes 'multiqc.modules.featurecounts' as an importable package[^1],
2025-06-08T10:05:32,496           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,497           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,498           package, please make sure that 'multiqc.modules.featurecounts' is explicitly added
2025-06-08T10:05:32,498           to the `packages` configuration field.

2025-06-08T10:05:32,499           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,500           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,500           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,501           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,502           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,503           If you don't want 'multiqc.modules.featurecounts' to be distributed and are
2025-06-08T10:05:32,504           already explicitly excluding 'multiqc.modules.featurecounts' via
2025-06-08T10:05:32,504           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,505           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,505           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,506           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,507           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,509           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,509                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,510                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,511                 directory, all directories are treated like packages.
2025-06-08T10:05:32,511           ********************************************************************************

2025-06-08T10:05:32,512   !!
2025-06-08T10:05:32,513     check.warn(importable)
2025-06-08T10:05:32,513   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.fgbio' is absent from the `packages` configuration.
2025-06-08T10:05:32,514   !!

2025-06-08T10:05:32,515           ********************************************************************************
2025-06-08T10:05:32,515           ############################
2025-06-08T10:05:32,516           # Package would be ignored #
2025-06-08T10:05:32,516           ############################
2025-06-08T10:05:32,517           Python recognizes 'multiqc.modules.fgbio' as an importable package[^1],
2025-06-08T10:05:32,518           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,519           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,519           package, please make sure that 'multiqc.modules.fgbio' is explicitly added
2025-06-08T10:05:32,520           to the `packages` configuration field.

2025-06-08T10:05:32,520           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,521           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,521           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,522           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,523           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,524           If you don't want 'multiqc.modules.fgbio' to be distributed and are
2025-06-08T10:05:32,525           already explicitly excluding 'multiqc.modules.fgbio' via
2025-06-08T10:05:32,525           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,525           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,526           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,527           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,528           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,529           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,530                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,530                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,531                 directory, all directories are treated like packages.
2025-06-08T10:05:32,531           ********************************************************************************

2025-06-08T10:05:32,533   !!
2025-06-08T10:05:32,533     check.warn(importable)
2025-06-08T10:05:32,534   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.filtlong' is absent from the `packages` configuration.
2025-06-08T10:05:32,534   !!

2025-06-08T10:05:32,535           ********************************************************************************
2025-06-08T10:05:32,536           ############################
2025-06-08T10:05:32,536           # Package would be ignored #
2025-06-08T10:05:32,537           ############################
2025-06-08T10:05:32,537           Python recognizes 'multiqc.modules.filtlong' as an importable package[^1],
2025-06-08T10:05:32,538           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,539           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,540           package, please make sure that 'multiqc.modules.filtlong' is explicitly added
2025-06-08T10:05:32,540           to the `packages` configuration field.

2025-06-08T10:05:32,542           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,542           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,543           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,544           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,545           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,546           If you don't want 'multiqc.modules.filtlong' to be distributed and are
2025-06-08T10:05:32,546           already explicitly excluding 'multiqc.modules.filtlong' via
2025-06-08T10:05:32,547           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,548           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,548           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,549           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,550           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,551           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,552                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,552                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,553                 directory, all directories are treated like packages.
2025-06-08T10:05:32,553           ********************************************************************************

2025-06-08T10:05:32,554   !!
2025-06-08T10:05:32,555     check.warn(importable)
2025-06-08T10:05:32,555   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.flash' is absent from the `packages` configuration.
2025-06-08T10:05:32,555   !!

2025-06-08T10:05:32,556           ********************************************************************************
2025-06-08T10:05:32,557           ############################
2025-06-08T10:05:32,557           # Package would be ignored #
2025-06-08T10:05:32,558           ############################
2025-06-08T10:05:32,558           Python recognizes 'multiqc.modules.flash' as an importable package[^1],
2025-06-08T10:05:32,559           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,560           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,560           package, please make sure that 'multiqc.modules.flash' is explicitly added
2025-06-08T10:05:32,561           to the `packages` configuration field.

2025-06-08T10:05:32,562           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,562           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,563           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,564           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,565           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,566           If you don't want 'multiqc.modules.flash' to be distributed and are
2025-06-08T10:05:32,566           already explicitly excluding 'multiqc.modules.flash' via
2025-06-08T10:05:32,567           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,567           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,568           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,569           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,570           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,572           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,572                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,573                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,574                 directory, all directories are treated like packages.
2025-06-08T10:05:32,574           ********************************************************************************

2025-06-08T10:05:32,575   !!
2025-06-08T10:05:32,576     check.warn(importable)
2025-06-08T10:05:32,576   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.flexbar' is absent from the `packages` configuration.
2025-06-08T10:05:32,577   !!

2025-06-08T10:05:32,578           ********************************************************************************
2025-06-08T10:05:32,579           ############################
2025-06-08T10:05:32,579           # Package would be ignored #
2025-06-08T10:05:32,579           ############################
2025-06-08T10:05:32,580           Python recognizes 'multiqc.modules.flexbar' as an importable package[^1],
2025-06-08T10:05:32,580           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,581           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,582           package, please make sure that 'multiqc.modules.flexbar' is explicitly added
2025-06-08T10:05:32,582           to the `packages` configuration field.

2025-06-08T10:05:32,583           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,583           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,584           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,585           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,586           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,587           If you don't want 'multiqc.modules.flexbar' to be distributed and are
2025-06-08T10:05:32,587           already explicitly excluding 'multiqc.modules.flexbar' via
2025-06-08T10:05:32,588           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,588           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,589           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,590           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,591           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,592           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,593                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,593                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,594                 directory, all directories are treated like packages.
2025-06-08T10:05:32,594           ********************************************************************************

2025-06-08T10:05:32,595   !!
2025-06-08T10:05:32,596     check.warn(importable)
2025-06-08T10:05:32,596   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.freyja' is absent from the `packages` configuration.
2025-06-08T10:05:32,597   !!

2025-06-08T10:05:32,598           ********************************************************************************
2025-06-08T10:05:32,598           ############################
2025-06-08T10:05:32,599           # Package would be ignored #
2025-06-08T10:05:32,599           ############################
2025-06-08T10:05:32,600           Python recognizes 'multiqc.modules.freyja' as an importable package[^1],
2025-06-08T10:05:32,600           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,601           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,602           package, please make sure that 'multiqc.modules.freyja' is explicitly added
2025-06-08T10:05:32,602           to the `packages` configuration field.

2025-06-08T10:05:32,603           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,604           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,605           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,606           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,607           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,607           If you don't want 'multiqc.modules.freyja' to be distributed and are
2025-06-08T10:05:32,608           already explicitly excluding 'multiqc.modules.freyja' via
2025-06-08T10:05:32,608           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,609           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,609           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,610           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,611           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,612           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,613                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,613                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,614                 directory, all directories are treated like packages.
2025-06-08T10:05:32,614           ********************************************************************************

2025-06-08T10:05:32,615   !!
2025-06-08T10:05:32,615     check.warn(importable)
2025-06-08T10:05:32,616   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.ganon' is absent from the `packages` configuration.
2025-06-08T10:05:32,616   !!

2025-06-08T10:05:32,618           ********************************************************************************
2025-06-08T10:05:32,618           ############################
2025-06-08T10:05:32,619           # Package would be ignored #
2025-06-08T10:05:32,619           ############################
2025-06-08T10:05:32,620           Python recognizes 'multiqc.modules.ganon' as an importable package[^1],
2025-06-08T10:05:32,620           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,621           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,622           package, please make sure that 'multiqc.modules.ganon' is explicitly added
2025-06-08T10:05:32,622           to the `packages` configuration field.

2025-06-08T10:05:32,623           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,624           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,625           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,626           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,627           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,628           If you don't want 'multiqc.modules.ganon' to be distributed and are
2025-06-08T10:05:32,628           already explicitly excluding 'multiqc.modules.ganon' via
2025-06-08T10:05:32,629           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,629           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,630           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,631           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,632           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,633           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,634                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,635                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,635                 directory, all directories are treated like packages.
2025-06-08T10:05:32,636           ********************************************************************************

2025-06-08T10:05:32,637   !!
2025-06-08T10:05:32,637     check.warn(importable)
2025-06-08T10:05:32,637   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.gatk' is absent from the `packages` configuration.
2025-06-08T10:05:32,638   !!

2025-06-08T10:05:32,639           ********************************************************************************
2025-06-08T10:05:32,639           ############################
2025-06-08T10:05:32,640           # Package would be ignored #
2025-06-08T10:05:32,640           ############################
2025-06-08T10:05:32,641           Python recognizes 'multiqc.modules.gatk' as an importable package[^1],
2025-06-08T10:05:32,641           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,642           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,642           package, please make sure that 'multiqc.modules.gatk' is explicitly added
2025-06-08T10:05:32,643           to the `packages` configuration field.

2025-06-08T10:05:32,644           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,644           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,645           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,646           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,647           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,648           If you don't want 'multiqc.modules.gatk' to be distributed and are
2025-06-08T10:05:32,648           already explicitly excluding 'multiqc.modules.gatk' via
2025-06-08T10:05:32,649           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,649           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,650           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,651           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,652           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,653           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,654                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,654                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,655                 directory, all directories are treated like packages.
2025-06-08T10:05:32,655           ********************************************************************************

2025-06-08T10:05:32,656   !!
2025-06-08T10:05:32,657     check.warn(importable)
2025-06-08T10:05:32,658   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.gffcompare' is absent from the `packages` configuration.
2025-06-08T10:05:32,658   !!

2025-06-08T10:05:32,659           ********************************************************************************
2025-06-08T10:05:32,660           ############################
2025-06-08T10:05:32,660           # Package would be ignored #
2025-06-08T10:05:32,661           ############################
2025-06-08T10:05:32,661           Python recognizes 'multiqc.modules.gffcompare' as an importable package[^1],
2025-06-08T10:05:32,662           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,663           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,663           package, please make sure that 'multiqc.modules.gffcompare' is explicitly added
2025-06-08T10:05:32,664           to the `packages` configuration field.

2025-06-08T10:05:32,665           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,665           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,666           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,667           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,667           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,668           If you don't want 'multiqc.modules.gffcompare' to be distributed and are
2025-06-08T10:05:32,669           already explicitly excluding 'multiqc.modules.gffcompare' via
2025-06-08T10:05:32,669           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,670           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,670           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,671           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,672           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,674           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,674                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,675                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,675                 directory, all directories are treated like packages.
2025-06-08T10:05:32,676           ********************************************************************************

2025-06-08T10:05:32,677   !!
2025-06-08T10:05:32,678     check.warn(importable)
2025-06-08T10:05:32,678   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.glimpse' is absent from the `packages` configuration.
2025-06-08T10:05:32,679   !!

2025-06-08T10:05:32,680           ********************************************************************************
2025-06-08T10:05:32,680           ############################
2025-06-08T10:05:32,681           # Package would be ignored #
2025-06-08T10:05:32,681           ############################
2025-06-08T10:05:32,682           Python recognizes 'multiqc.modules.glimpse' as an importable package[^1],
2025-06-08T10:05:32,682           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,683           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,684           package, please make sure that 'multiqc.modules.glimpse' is explicitly added
2025-06-08T10:05:32,684           to the `packages` configuration field.

2025-06-08T10:05:32,685           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,686           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,686           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,688           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,689           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,690           If you don't want 'multiqc.modules.glimpse' to be distributed and are
2025-06-08T10:05:32,690           already explicitly excluding 'multiqc.modules.glimpse' via
2025-06-08T10:05:32,691           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,691           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,692           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,693           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,694           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,695           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,696                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,696                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,696                 directory, all directories are treated like packages.
2025-06-08T10:05:32,697           ********************************************************************************

2025-06-08T10:05:32,698   !!
2025-06-08T10:05:32,698     check.warn(importable)
2025-06-08T10:05:32,699   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.goleft_indexcov' is absent from the `packages` configuration.
2025-06-08T10:05:32,699   !!

2025-06-08T10:05:32,701           ********************************************************************************
2025-06-08T10:05:32,701           ############################
2025-06-08T10:05:32,701           # Package would be ignored #
2025-06-08T10:05:32,702           ############################
2025-06-08T10:05:32,702           Python recognizes 'multiqc.modules.goleft_indexcov' as an importable package[^1],
2025-06-08T10:05:32,703           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,704           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,704           package, please make sure that 'multiqc.modules.goleft_indexcov' is explicitly added
2025-06-08T10:05:32,705           to the `packages` configuration field.

2025-06-08T10:05:32,706           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,706           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,707           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,708           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,709           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,710           If you don't want 'multiqc.modules.goleft_indexcov' to be distributed and are
2025-06-08T10:05:32,710           already explicitly excluding 'multiqc.modules.goleft_indexcov' via
2025-06-08T10:05:32,711           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,711           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,712           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,713           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,714           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,715           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,716                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,716                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,717                 directory, all directories are treated like packages.
2025-06-08T10:05:32,717           ********************************************************************************

2025-06-08T10:05:32,718   !!
2025-06-08T10:05:32,719     check.warn(importable)
2025-06-08T10:05:32,719   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.gopeaks' is absent from the `packages` configuration.
2025-06-08T10:05:32,720   !!

2025-06-08T10:05:32,721           ********************************************************************************
2025-06-08T10:05:32,722           ############################
2025-06-08T10:05:32,722           # Package would be ignored #
2025-06-08T10:05:32,723           ############################
2025-06-08T10:05:32,723           Python recognizes 'multiqc.modules.gopeaks' as an importable package[^1],
2025-06-08T10:05:32,724           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,725           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,725           package, please make sure that 'multiqc.modules.gopeaks' is explicitly added
2025-06-08T10:05:32,725           to the `packages` configuration field.

2025-06-08T10:05:32,726           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,727           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,727           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,728           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,729           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,730           If you don't want 'multiqc.modules.gopeaks' to be distributed and are
2025-06-08T10:05:32,730           already explicitly excluding 'multiqc.modules.gopeaks' via
2025-06-08T10:05:32,731           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,731           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,732           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,733           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,734           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,735           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,736                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,736                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,737                 directory, all directories are treated like packages.
2025-06-08T10:05:32,737           ********************************************************************************

2025-06-08T10:05:32,738   !!
2025-06-08T10:05:32,739     check.warn(importable)
2025-06-08T10:05:32,739   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.gtdbtk' is absent from the `packages` configuration.
2025-06-08T10:05:32,740   !!

2025-06-08T10:05:32,741           ********************************************************************************
2025-06-08T10:05:32,741           ############################
2025-06-08T10:05:32,742           # Package would be ignored #
2025-06-08T10:05:32,742           ############################
2025-06-08T10:05:32,743           Python recognizes 'multiqc.modules.gtdbtk' as an importable package[^1],
2025-06-08T10:05:32,743           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,745           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,745           package, please make sure that 'multiqc.modules.gtdbtk' is explicitly added
2025-06-08T10:05:32,746           to the `packages` configuration field.

2025-06-08T10:05:32,747           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,747           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,748           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,749           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,750           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,751           If you don't want 'multiqc.modules.gtdbtk' to be distributed and are
2025-06-08T10:05:32,752           already explicitly excluding 'multiqc.modules.gtdbtk' via
2025-06-08T10:05:32,753           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,753           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,754           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,754           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,755           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,757           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,757                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,758                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,758                 directory, all directories are treated like packages.
2025-06-08T10:05:32,758           ********************************************************************************

2025-06-08T10:05:32,759   !!
2025-06-08T10:05:32,760     check.warn(importable)
2025-06-08T10:05:32,760   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.haplocheck' is absent from the `packages` configuration.
2025-06-08T10:05:32,761   !!

2025-06-08T10:05:32,762           ********************************************************************************
2025-06-08T10:05:32,762           ############################
2025-06-08T10:05:32,763           # Package would be ignored #
2025-06-08T10:05:32,763           ############################
2025-06-08T10:05:32,764           Python recognizes 'multiqc.modules.haplocheck' as an importable package[^1],
2025-06-08T10:05:32,764           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,765           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,766           package, please make sure that 'multiqc.modules.haplocheck' is explicitly added
2025-06-08T10:05:32,766           to the `packages` configuration field.

2025-06-08T10:05:32,767           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,768           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,768           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,769           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,770           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,771           If you don't want 'multiqc.modules.haplocheck' to be distributed and are
2025-06-08T10:05:32,772           already explicitly excluding 'multiqc.modules.haplocheck' via
2025-06-08T10:05:32,772           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,773           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,773           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,774           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,775           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,777           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,778                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,778                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,779                 directory, all directories are treated like packages.
2025-06-08T10:05:32,780           ********************************************************************************

2025-06-08T10:05:32,781   !!
2025-06-08T10:05:32,781     check.warn(importable)
2025-06-08T10:05:32,782   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.happy' is absent from the `packages` configuration.
2025-06-08T10:05:32,782   !!

2025-06-08T10:05:32,783           ********************************************************************************
2025-06-08T10:05:32,784           ############################
2025-06-08T10:05:32,784           # Package would be ignored #
2025-06-08T10:05:32,785           ############################
2025-06-08T10:05:32,785           Python recognizes 'multiqc.modules.happy' as an importable package[^1],
2025-06-08T10:05:32,786           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,787           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,787           package, please make sure that 'multiqc.modules.happy' is explicitly added
2025-06-08T10:05:32,787           to the `packages` configuration field.

2025-06-08T10:05:32,788           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,789           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,790           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,791           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,791           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,792           If you don't want 'multiqc.modules.happy' to be distributed and are
2025-06-08T10:05:32,793           already explicitly excluding 'multiqc.modules.happy' via
2025-06-08T10:05:32,793           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,794           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,794           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,795           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,796           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,798           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,798                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,799                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,799                 directory, all directories are treated like packages.
2025-06-08T10:05:32,800           ********************************************************************************

2025-06-08T10:05:32,801   !!
2025-06-08T10:05:32,802     check.warn(importable)
2025-06-08T10:05:32,802   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.hicexplorer' is absent from the `packages` configuration.
2025-06-08T10:05:32,803   !!

2025-06-08T10:05:32,804           ********************************************************************************
2025-06-08T10:05:32,804           ############################
2025-06-08T10:05:32,805           # Package would be ignored #
2025-06-08T10:05:32,805           ############################
2025-06-08T10:05:32,806           Python recognizes 'multiqc.modules.hicexplorer' as an importable package[^1],
2025-06-08T10:05:32,806           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,807           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,808           package, please make sure that 'multiqc.modules.hicexplorer' is explicitly added
2025-06-08T10:05:32,808           to the `packages` configuration field.

2025-06-08T10:05:32,809           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,810           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,811           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,811           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,812           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,813           If you don't want 'multiqc.modules.hicexplorer' to be distributed and are
2025-06-08T10:05:32,813           already explicitly excluding 'multiqc.modules.hicexplorer' via
2025-06-08T10:05:32,814           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,814           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,815           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,815           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,816           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,817           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,818                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,818                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,819                 directory, all directories are treated like packages.
2025-06-08T10:05:32,819           ********************************************************************************

2025-06-08T10:05:32,820   !!
2025-06-08T10:05:32,821     check.warn(importable)
2025-06-08T10:05:32,821   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.hicpro' is absent from the `packages` configuration.
2025-06-08T10:05:32,821   !!

2025-06-08T10:05:32,822           ********************************************************************************
2025-06-08T10:05:32,823           ############################
2025-06-08T10:05:32,823           # Package would be ignored #
2025-06-08T10:05:32,824           ############################
2025-06-08T10:05:32,824           Python recognizes 'multiqc.modules.hicpro' as an importable package[^1],
2025-06-08T10:05:32,825           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,826           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,826           package, please make sure that 'multiqc.modules.hicpro' is explicitly added
2025-06-08T10:05:32,827           to the `packages` configuration field.

2025-06-08T10:05:32,828           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,828           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,829           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,830           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,831           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,832           If you don't want 'multiqc.modules.hicpro' to be distributed and are
2025-06-08T10:05:32,832           already explicitly excluding 'multiqc.modules.hicpro' via
2025-06-08T10:05:32,833           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,833           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,834           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,835           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,836           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,837           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,838                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,839                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,839                 directory, all directories are treated like packages.
2025-06-08T10:05:32,839           ********************************************************************************

2025-06-08T10:05:32,840   !!
2025-06-08T10:05:32,841     check.warn(importable)
2025-06-08T10:05:32,841   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.hicup' is absent from the `packages` configuration.
2025-06-08T10:05:32,842   !!

2025-06-08T10:05:32,842           ********************************************************************************
2025-06-08T10:05:32,843           ############################
2025-06-08T10:05:32,843           # Package would be ignored #
2025-06-08T10:05:32,844           ############################
2025-06-08T10:05:32,844           Python recognizes 'multiqc.modules.hicup' as an importable package[^1],
2025-06-08T10:05:32,845           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,846           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,846           package, please make sure that 'multiqc.modules.hicup' is explicitly added
2025-06-08T10:05:32,847           to the `packages` configuration field.

2025-06-08T10:05:32,847           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,848           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,848           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,849           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,850           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,851           If you don't want 'multiqc.modules.hicup' to be distributed and are
2025-06-08T10:05:32,852           already explicitly excluding 'multiqc.modules.hicup' via
2025-06-08T10:05:32,852           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,853           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,854           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,855           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,856           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,858           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,858                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,859                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,859                 directory, all directories are treated like packages.
2025-06-08T10:05:32,860           ********************************************************************************

2025-06-08T10:05:32,861   !!
2025-06-08T10:05:32,861     check.warn(importable)
2025-06-08T10:05:32,862   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.hifiasm' is absent from the `packages` configuration.
2025-06-08T10:05:32,862   !!

2025-06-08T10:05:32,863           ********************************************************************************
2025-06-08T10:05:32,864           ############################
2025-06-08T10:05:32,864           # Package would be ignored #
2025-06-08T10:05:32,865           ############################
2025-06-08T10:05:32,865           Python recognizes 'multiqc.modules.hifiasm' as an importable package[^1],
2025-06-08T10:05:32,866           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,867           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,867           package, please make sure that 'multiqc.modules.hifiasm' is explicitly added
2025-06-08T10:05:32,868           to the `packages` configuration field.

2025-06-08T10:05:32,869           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,869           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,870           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,870           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,871           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,872           If you don't want 'multiqc.modules.hifiasm' to be distributed and are
2025-06-08T10:05:32,873           already explicitly excluding 'multiqc.modules.hifiasm' via
2025-06-08T10:05:32,873           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,874           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,874           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,875           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,876           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,877           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,878                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,878                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,879                 directory, all directories are treated like packages.
2025-06-08T10:05:32,879           ********************************************************************************

2025-06-08T10:05:32,880   !!
2025-06-08T10:05:32,881     check.warn(importable)
2025-06-08T10:05:32,881   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.hisat2' is absent from the `packages` configuration.
2025-06-08T10:05:32,881   !!

2025-06-08T10:05:32,882           ********************************************************************************
2025-06-08T10:05:32,883           ############################
2025-06-08T10:05:32,883           # Package would be ignored #
2025-06-08T10:05:32,884           ############################
2025-06-08T10:05:32,884           Python recognizes 'multiqc.modules.hisat2' as an importable package[^1],
2025-06-08T10:05:32,885           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,886           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,886           package, please make sure that 'multiqc.modules.hisat2' is explicitly added
2025-06-08T10:05:32,887           to the `packages` configuration field.

2025-06-08T10:05:32,888           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,888           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,889           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,890           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,891           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,892           If you don't want 'multiqc.modules.hisat2' to be distributed and are
2025-06-08T10:05:32,892           already explicitly excluding 'multiqc.modules.hisat2' via
2025-06-08T10:05:32,893           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,893           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,894           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,895           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,896           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,897           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,897                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,898                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,898                 directory, all directories are treated like packages.
2025-06-08T10:05:32,898           ********************************************************************************

2025-06-08T10:05:32,899   !!
2025-06-08T10:05:32,900     check.warn(importable)
2025-06-08T10:05:32,900   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.homer' is absent from the `packages` configuration.
2025-06-08T10:05:32,900   !!

2025-06-08T10:05:32,901           ********************************************************************************
2025-06-08T10:05:32,902           ############################
2025-06-08T10:05:32,902           # Package would be ignored #
2025-06-08T10:05:32,902           ############################
2025-06-08T10:05:32,903           Python recognizes 'multiqc.modules.homer' as an importable package[^1],
2025-06-08T10:05:32,903           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,904           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,905           package, please make sure that 'multiqc.modules.homer' is explicitly added
2025-06-08T10:05:32,905           to the `packages` configuration field.

2025-06-08T10:05:32,906           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,906           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,907           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,908           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,909           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,910           If you don't want 'multiqc.modules.homer' to be distributed and are
2025-06-08T10:05:32,910           already explicitly excluding 'multiqc.modules.homer' via
2025-06-08T10:05:32,911           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,911           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,912           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,913           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,914           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,915           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,915                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,916                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,916                 directory, all directories are treated like packages.
2025-06-08T10:05:32,917           ********************************************************************************

2025-06-08T10:05:32,918   !!
2025-06-08T10:05:32,918     check.warn(importable)
2025-06-08T10:05:32,919   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.hops' is absent from the `packages` configuration.
2025-06-08T10:05:32,919   !!

2025-06-08T10:05:32,921           ********************************************************************************
2025-06-08T10:05:32,921           ############################
2025-06-08T10:05:32,922           # Package would be ignored #
2025-06-08T10:05:32,922           ############################
2025-06-08T10:05:32,923           Python recognizes 'multiqc.modules.hops' as an importable package[^1],
2025-06-08T10:05:32,923           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,924           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,924           package, please make sure that 'multiqc.modules.hops' is explicitly added
2025-06-08T10:05:32,925           to the `packages` configuration field.

2025-06-08T10:05:32,926           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,926           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,926           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,927           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,928           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,929           If you don't want 'multiqc.modules.hops' to be distributed and are
2025-06-08T10:05:32,930           already explicitly excluding 'multiqc.modules.hops' via
2025-06-08T10:05:32,930           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,931           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,931           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,932           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,934           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,935           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,936                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,936                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,937                 directory, all directories are treated like packages.
2025-06-08T10:05:32,937           ********************************************************************************

2025-06-08T10:05:32,938   !!
2025-06-08T10:05:32,939     check.warn(importable)
2025-06-08T10:05:32,939   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.hostile' is absent from the `packages` configuration.
2025-06-08T10:05:32,940   !!

2025-06-08T10:05:32,941           ********************************************************************************
2025-06-08T10:05:32,941           ############################
2025-06-08T10:05:32,942           # Package would be ignored #
2025-06-08T10:05:32,942           ############################
2025-06-08T10:05:32,943           Python recognizes 'multiqc.modules.hostile' as an importable package[^1],
2025-06-08T10:05:32,943           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,944           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,945           package, please make sure that 'multiqc.modules.hostile' is explicitly added
2025-06-08T10:05:32,945           to the `packages` configuration field.

2025-06-08T10:05:32,946           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,947           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,947           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,949           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,950           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,951           If you don't want 'multiqc.modules.hostile' to be distributed and are
2025-06-08T10:05:32,951           already explicitly excluding 'multiqc.modules.hostile' via
2025-06-08T10:05:32,951           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,952           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,952           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,953           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,954           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,955           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,955                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,956                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,956                 directory, all directories are treated like packages.
2025-06-08T10:05:32,957           ********************************************************************************

2025-06-08T10:05:32,958   !!
2025-06-08T10:05:32,958     check.warn(importable)
2025-06-08T10:05:32,958   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.htseq' is absent from the `packages` configuration.
2025-06-08T10:05:32,959   !!

2025-06-08T10:05:32,960           ********************************************************************************
2025-06-08T10:05:32,960           ############################
2025-06-08T10:05:32,961           # Package would be ignored #
2025-06-08T10:05:32,961           ############################
2025-06-08T10:05:32,962           Python recognizes 'multiqc.modules.htseq' as an importable package[^1],
2025-06-08T10:05:32,962           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,963           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,963           package, please make sure that 'multiqc.modules.htseq' is explicitly added
2025-06-08T10:05:32,964           to the `packages` configuration field.

2025-06-08T10:05:32,965           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,965           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,966           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,967           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,968           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,969           If you don't want 'multiqc.modules.htseq' to be distributed and are
2025-06-08T10:05:32,969           already explicitly excluding 'multiqc.modules.htseq' via
2025-06-08T10:05:32,969           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,970           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,970           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,971           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,972           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,974           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,975                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,975                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,976                 directory, all directories are treated like packages.
2025-06-08T10:05:32,976           ********************************************************************************

2025-06-08T10:05:32,977   !!
2025-06-08T10:05:32,978     check.warn(importable)
2025-06-08T10:05:32,978   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.humid' is absent from the `packages` configuration.
2025-06-08T10:05:32,978   !!

2025-06-08T10:05:32,979           ********************************************************************************
2025-06-08T10:05:32,980           ############################
2025-06-08T10:05:32,980           # Package would be ignored #
2025-06-08T10:05:32,981           ############################
2025-06-08T10:05:32,981           Python recognizes 'multiqc.modules.humid' as an importable package[^1],
2025-06-08T10:05:32,981           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:32,982           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:32,983           package, please make sure that 'multiqc.modules.humid' is explicitly added
2025-06-08T10:05:32,983           to the `packages` configuration field.

2025-06-08T10:05:32,984           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:32,984           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:32,985           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:32,986           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:32,987           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:32,987           If you don't want 'multiqc.modules.humid' to be distributed and are
2025-06-08T10:05:32,988           already explicitly excluding 'multiqc.modules.humid' via
2025-06-08T10:05:32,988           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:32,989           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:32,990           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:32,991           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:32,992           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:32,993           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:32,994                 even if it does not contain any `.py` files.
2025-06-08T10:05:32,994                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:32,995                 directory, all directories are treated like packages.
2025-06-08T10:05:32,995           ********************************************************************************

2025-06-08T10:05:32,996   !!
2025-06-08T10:05:32,997     check.warn(importable)
2025-06-08T10:05:32,997   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.interop' is absent from the `packages` configuration.
2025-06-08T10:05:32,998   !!

2025-06-08T10:05:32,999           ********************************************************************************
2025-06-08T10:05:32,999           ############################
2025-06-08T10:05:33,000           # Package would be ignored #
2025-06-08T10:05:33,000           ############################
2025-06-08T10:05:33,001           Python recognizes 'multiqc.modules.interop' as an importable package[^1],
2025-06-08T10:05:33,001           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,002           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,003           package, please make sure that 'multiqc.modules.interop' is explicitly added
2025-06-08T10:05:33,003           to the `packages` configuration field.

2025-06-08T10:05:33,004           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,005           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,005           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,006           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,007           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,008           If you don't want 'multiqc.modules.interop' to be distributed and are
2025-06-08T10:05:33,008           already explicitly excluding 'multiqc.modules.interop' via
2025-06-08T10:05:33,009           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,009           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,010           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,011           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,012           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,013           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,013                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,014                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,014                 directory, all directories are treated like packages.
2025-06-08T10:05:33,015           ********************************************************************************

2025-06-08T10:05:33,015   !!
2025-06-08T10:05:33,016     check.warn(importable)
2025-06-08T10:05:33,016   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.isoseq' is absent from the `packages` configuration.
2025-06-08T10:05:33,017   !!

2025-06-08T10:05:33,018           ********************************************************************************
2025-06-08T10:05:33,018           ############################
2025-06-08T10:05:33,019           # Package would be ignored #
2025-06-08T10:05:33,019           ############################
2025-06-08T10:05:33,020           Python recognizes 'multiqc.modules.isoseq' as an importable package[^1],
2025-06-08T10:05:33,020           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,021           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,021           package, please make sure that 'multiqc.modules.isoseq' is explicitly added
2025-06-08T10:05:33,022           to the `packages` configuration field.

2025-06-08T10:05:33,023           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,023           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,024           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,025           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,026           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,027           If you don't want 'multiqc.modules.isoseq' to be distributed and are
2025-06-08T10:05:33,027           already explicitly excluding 'multiqc.modules.isoseq' via
2025-06-08T10:05:33,028           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,028           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,029           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,029           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,030           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,032           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,033                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,033                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,034                 directory, all directories are treated like packages.
2025-06-08T10:05:33,034           ********************************************************************************

2025-06-08T10:05:33,035   !!
2025-06-08T10:05:33,035     check.warn(importable)
2025-06-08T10:05:33,036   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.ivar' is absent from the `packages` configuration.
2025-06-08T10:05:33,036   !!

2025-06-08T10:05:33,037           ********************************************************************************
2025-06-08T10:05:33,038           ############################
2025-06-08T10:05:33,038           # Package would be ignored #
2025-06-08T10:05:33,039           ############################
2025-06-08T10:05:33,039           Python recognizes 'multiqc.modules.ivar' as an importable package[^1],
2025-06-08T10:05:33,040           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,040           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,041           package, please make sure that 'multiqc.modules.ivar' is explicitly added
2025-06-08T10:05:33,041           to the `packages` configuration field.

2025-06-08T10:05:33,042           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,043           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,043           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,044           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,045           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,046           If you don't want 'multiqc.modules.ivar' to be distributed and are
2025-06-08T10:05:33,047           already explicitly excluding 'multiqc.modules.ivar' via
2025-06-08T10:05:33,047           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,048           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,049           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,050           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,051           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,052           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,053                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,053                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,054                 directory, all directories are treated like packages.
2025-06-08T10:05:33,054           ********************************************************************************

2025-06-08T10:05:33,055   !!
2025-06-08T10:05:33,056     check.warn(importable)
2025-06-08T10:05:33,056   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.jcvi' is absent from the `packages` configuration.
2025-06-08T10:05:33,057   !!

2025-06-08T10:05:33,057           ********************************************************************************
2025-06-08T10:05:33,058           ############################
2025-06-08T10:05:33,058           # Package would be ignored #
2025-06-08T10:05:33,059           ############################
2025-06-08T10:05:33,059           Python recognizes 'multiqc.modules.jcvi' as an importable package[^1],
2025-06-08T10:05:33,060           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,061           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,061           package, please make sure that 'multiqc.modules.jcvi' is explicitly added
2025-06-08T10:05:33,062           to the `packages` configuration field.

2025-06-08T10:05:33,063           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,063           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,063           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,064           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,065           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,066           If you don't want 'multiqc.modules.jcvi' to be distributed and are
2025-06-08T10:05:33,066           already explicitly excluding 'multiqc.modules.jcvi' via
2025-06-08T10:05:33,067           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,067           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,068           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,069           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,069           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,071           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,071                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,072                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,072                 directory, all directories are treated like packages.
2025-06-08T10:05:33,073           ********************************************************************************

2025-06-08T10:05:33,074   !!
2025-06-08T10:05:33,074     check.warn(importable)
2025-06-08T10:05:33,075   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.jellyfish' is absent from the `packages` configuration.
2025-06-08T10:05:33,075   !!

2025-06-08T10:05:33,076           ********************************************************************************
2025-06-08T10:05:33,077           ############################
2025-06-08T10:05:33,077           # Package would be ignored #
2025-06-08T10:05:33,078           ############################
2025-06-08T10:05:33,078           Python recognizes 'multiqc.modules.jellyfish' as an importable package[^1],
2025-06-08T10:05:33,079           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,080           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,080           package, please make sure that 'multiqc.modules.jellyfish' is explicitly added
2025-06-08T10:05:33,081           to the `packages` configuration field.

2025-06-08T10:05:33,082           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,082           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,083           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,084           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,085           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,086           If you don't want 'multiqc.modules.jellyfish' to be distributed and are
2025-06-08T10:05:33,087           already explicitly excluding 'multiqc.modules.jellyfish' via
2025-06-08T10:05:33,087           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,088           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,089           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,090           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,090           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,092           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,092                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,093                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,093                 directory, all directories are treated like packages.
2025-06-08T10:05:33,094           ********************************************************************************

2025-06-08T10:05:33,094   !!
2025-06-08T10:05:33,095     check.warn(importable)
2025-06-08T10:05:33,095   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.kaiju' is absent from the `packages` configuration.
2025-06-08T10:05:33,096   !!

2025-06-08T10:05:33,097           ********************************************************************************
2025-06-08T10:05:33,097           ############################
2025-06-08T10:05:33,098           # Package would be ignored #
2025-06-08T10:05:33,098           ############################
2025-06-08T10:05:33,099           Python recognizes 'multiqc.modules.kaiju' as an importable package[^1],
2025-06-08T10:05:33,099           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,100           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,100           package, please make sure that 'multiqc.modules.kaiju' is explicitly added
2025-06-08T10:05:33,101           to the `packages` configuration field.

2025-06-08T10:05:33,102           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,102           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,103           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,104           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,105           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,106           If you don't want 'multiqc.modules.kaiju' to be distributed and are
2025-06-08T10:05:33,106           already explicitly excluding 'multiqc.modules.kaiju' via
2025-06-08T10:05:33,107           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,107           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,108           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,109           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,110           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,111           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,112                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,112                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,113                 directory, all directories are treated like packages.
2025-06-08T10:05:33,113           ********************************************************************************

2025-06-08T10:05:33,114   !!
2025-06-08T10:05:33,115     check.warn(importable)
2025-06-08T10:05:33,115   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.kallisto' is absent from the `packages` configuration.
2025-06-08T10:05:33,116   !!

2025-06-08T10:05:33,117           ********************************************************************************
2025-06-08T10:05:33,117           ############################
2025-06-08T10:05:33,118           # Package would be ignored #
2025-06-08T10:05:33,118           ############################
2025-06-08T10:05:33,119           Python recognizes 'multiqc.modules.kallisto' as an importable package[^1],
2025-06-08T10:05:33,119           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,120           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,120           package, please make sure that 'multiqc.modules.kallisto' is explicitly added
2025-06-08T10:05:33,121           to the `packages` configuration field.

2025-06-08T10:05:33,121           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,122           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,122           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,123           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,124           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,125           If you don't want 'multiqc.modules.kallisto' to be distributed and are
2025-06-08T10:05:33,125           already explicitly excluding 'multiqc.modules.kallisto' via
2025-06-08T10:05:33,126           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,126           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,127           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,128           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,128           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,130           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,130                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,131                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,131                 directory, all directories are treated like packages.
2025-06-08T10:05:33,132           ********************************************************************************

2025-06-08T10:05:33,133   !!
2025-06-08T10:05:33,133     check.warn(importable)
2025-06-08T10:05:33,134   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.kat' is absent from the `packages` configuration.
2025-06-08T10:05:33,134   !!

2025-06-08T10:05:33,135           ********************************************************************************
2025-06-08T10:05:33,136           ############################
2025-06-08T10:05:33,136           # Package would be ignored #
2025-06-08T10:05:33,137           ############################
2025-06-08T10:05:33,137           Python recognizes 'multiqc.modules.kat' as an importable package[^1],
2025-06-08T10:05:33,138           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,139           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,140           package, please make sure that 'multiqc.modules.kat' is explicitly added
2025-06-08T10:05:33,140           to the `packages` configuration field.

2025-06-08T10:05:33,141           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,142           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,142           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,143           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,144           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,145           If you don't want 'multiqc.modules.kat' to be distributed and are
2025-06-08T10:05:33,146           already explicitly excluding 'multiqc.modules.kat' via
2025-06-08T10:05:33,146           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,146           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,147           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,148           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,149           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,150           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,150                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,151                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,151                 directory, all directories are treated like packages.
2025-06-08T10:05:33,152           ********************************************************************************

2025-06-08T10:05:33,152   !!
2025-06-08T10:05:33,153     check.warn(importable)
2025-06-08T10:05:33,153   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.kraken' is absent from the `packages` configuration.
2025-06-08T10:05:33,154   !!

2025-06-08T10:05:33,155           ********************************************************************************
2025-06-08T10:05:33,155           ############################
2025-06-08T10:05:33,156           # Package would be ignored #
2025-06-08T10:05:33,156           ############################
2025-06-08T10:05:33,157           Python recognizes 'multiqc.modules.kraken' as an importable package[^1],
2025-06-08T10:05:33,157           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,158           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,159           package, please make sure that 'multiqc.modules.kraken' is explicitly added
2025-06-08T10:05:33,159           to the `packages` configuration field.

2025-06-08T10:05:33,160           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,161           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,161           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,162           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,164           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,165           If you don't want 'multiqc.modules.kraken' to be distributed and are
2025-06-08T10:05:33,165           already explicitly excluding 'multiqc.modules.kraken' via
2025-06-08T10:05:33,166           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,166           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,167           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,168           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,169           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,170           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,171                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,171                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,172                 directory, all directories are treated like packages.
2025-06-08T10:05:33,172           ********************************************************************************

2025-06-08T10:05:33,173   !!
2025-06-08T10:05:33,174     check.warn(importable)
2025-06-08T10:05:33,174   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.leehom' is absent from the `packages` configuration.
2025-06-08T10:05:33,175   !!

2025-06-08T10:05:33,176           ********************************************************************************
2025-06-08T10:05:33,176           ############################
2025-06-08T10:05:33,176           # Package would be ignored #
2025-06-08T10:05:33,177           ############################
2025-06-08T10:05:33,177           Python recognizes 'multiqc.modules.leehom' as an importable package[^1],
2025-06-08T10:05:33,178           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,179           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,179           package, please make sure that 'multiqc.modules.leehom' is explicitly added
2025-06-08T10:05:33,180           to the `packages` configuration field.

2025-06-08T10:05:33,181           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,181           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,182           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,183           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,184           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,185           If you don't want 'multiqc.modules.leehom' to be distributed and are
2025-06-08T10:05:33,185           already explicitly excluding 'multiqc.modules.leehom' via
2025-06-08T10:05:33,186           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,186           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,187           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,188           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,189           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,191           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,191                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,192                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,192                 directory, all directories are treated like packages.
2025-06-08T10:05:33,193           ********************************************************************************

2025-06-08T10:05:33,194   !!
2025-06-08T10:05:33,194     check.warn(importable)
2025-06-08T10:05:33,195   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.librarian' is absent from the `packages` configuration.
2025-06-08T10:05:33,195   !!

2025-06-08T10:05:33,196           ********************************************************************************
2025-06-08T10:05:33,197           ############################
2025-06-08T10:05:33,197           # Package would be ignored #
2025-06-08T10:05:33,198           ############################
2025-06-08T10:05:33,198           Python recognizes 'multiqc.modules.librarian' as an importable package[^1],
2025-06-08T10:05:33,199           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,200           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,200           package, please make sure that 'multiqc.modules.librarian' is explicitly added
2025-06-08T10:05:33,201           to the `packages` configuration field.

2025-06-08T10:05:33,202           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,202           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,203           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,204           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,204           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,205           If you don't want 'multiqc.modules.librarian' to be distributed and are
2025-06-08T10:05:33,206           already explicitly excluding 'multiqc.modules.librarian' via
2025-06-08T10:05:33,206           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,207           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,207           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,208           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,209           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,210           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,211                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,211                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,211                 directory, all directories are treated like packages.
2025-06-08T10:05:33,212           ********************************************************************************

2025-06-08T10:05:33,213   !!
2025-06-08T10:05:33,213     check.warn(importable)
2025-06-08T10:05:33,214   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.lima' is absent from the `packages` configuration.
2025-06-08T10:05:33,214   !!

2025-06-08T10:05:33,215           ********************************************************************************
2025-06-08T10:05:33,216           ############################
2025-06-08T10:05:33,216           # Package would be ignored #
2025-06-08T10:05:33,217           ############################
2025-06-08T10:05:33,217           Python recognizes 'multiqc.modules.lima' as an importable package[^1],
2025-06-08T10:05:33,218           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,219           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,219           package, please make sure that 'multiqc.modules.lima' is explicitly added
2025-06-08T10:05:33,220           to the `packages` configuration field.

2025-06-08T10:05:33,221           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,221           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,222           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,222           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,223           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,225           If you don't want 'multiqc.modules.lima' to be distributed and are
2025-06-08T10:05:33,225           already explicitly excluding 'multiqc.modules.lima' via
2025-06-08T10:05:33,226           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,226           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,227           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,227           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,229           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,230           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,230                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,231                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,231                 directory, all directories are treated like packages.
2025-06-08T10:05:33,231           ********************************************************************************

2025-06-08T10:05:33,232   !!
2025-06-08T10:05:33,233     check.warn(importable)
2025-06-08T10:05:33,233   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.longranger' is absent from the `packages` configuration.
2025-06-08T10:05:33,233   !!

2025-06-08T10:05:33,234           ********************************************************************************
2025-06-08T10:05:33,235           ############################
2025-06-08T10:05:33,235           # Package would be ignored #
2025-06-08T10:05:33,236           ############################
2025-06-08T10:05:33,236           Python recognizes 'multiqc.modules.longranger' as an importable package[^1],
2025-06-08T10:05:33,236           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,237           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,238           package, please make sure that 'multiqc.modules.longranger' is explicitly added
2025-06-08T10:05:33,238           to the `packages` configuration field.

2025-06-08T10:05:33,240           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,240           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,241           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,242           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,243           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,243           If you don't want 'multiqc.modules.longranger' to be distributed and are
2025-06-08T10:05:33,244           already explicitly excluding 'multiqc.modules.longranger' via
2025-06-08T10:05:33,244           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,245           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,245           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,246           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,247           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,249           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,249                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,250                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,250                 directory, all directories are treated like packages.
2025-06-08T10:05:33,251           ********************************************************************************

2025-06-08T10:05:33,252   !!
2025-06-08T10:05:33,252     check.warn(importable)
2025-06-08T10:05:33,253   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.macs2' is absent from the `packages` configuration.
2025-06-08T10:05:33,253   !!

2025-06-08T10:05:33,254           ********************************************************************************
2025-06-08T10:05:33,254           ############################
2025-06-08T10:05:33,255           # Package would be ignored #
2025-06-08T10:05:33,255           ############################
2025-06-08T10:05:33,256           Python recognizes 'multiqc.modules.macs2' as an importable package[^1],
2025-06-08T10:05:33,257           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,258           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,258           package, please make sure that 'multiqc.modules.macs2' is explicitly added
2025-06-08T10:05:33,258           to the `packages` configuration field.

2025-06-08T10:05:33,259           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,260           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,260           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,261           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,262           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,263           If you don't want 'multiqc.modules.macs2' to be distributed and are
2025-06-08T10:05:33,263           already explicitly excluding 'multiqc.modules.macs2' via
2025-06-08T10:05:33,264           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,264           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,265           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,265           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,266           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,268           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,268                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,269                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,269                 directory, all directories are treated like packages.
2025-06-08T10:05:33,270           ********************************************************************************

2025-06-08T10:05:33,271   !!
2025-06-08T10:05:33,271     check.warn(importable)
2025-06-08T10:05:33,272   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.malt' is absent from the `packages` configuration.
2025-06-08T10:05:33,272   !!

2025-06-08T10:05:33,273           ********************************************************************************
2025-06-08T10:05:33,274           ############################
2025-06-08T10:05:33,274           # Package would be ignored #
2025-06-08T10:05:33,275           ############################
2025-06-08T10:05:33,275           Python recognizes 'multiqc.modules.malt' as an importable package[^1],
2025-06-08T10:05:33,276           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,277           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,277           package, please make sure that 'multiqc.modules.malt' is explicitly added
2025-06-08T10:05:33,278           to the `packages` configuration field.

2025-06-08T10:05:33,279           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,279           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,280           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,281           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,282           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,283           If you don't want 'multiqc.modules.malt' to be distributed and are
2025-06-08T10:05:33,284           already explicitly excluding 'multiqc.modules.malt' via
2025-06-08T10:05:33,284           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,285           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,285           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,286           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,287           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,288           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,288                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,289                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,289                 directory, all directories are treated like packages.
2025-06-08T10:05:33,289           ********************************************************************************

2025-06-08T10:05:33,290   !!
2025-06-08T10:05:33,291     check.warn(importable)
2025-06-08T10:05:33,291   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.mapdamage' is absent from the `packages` configuration.
2025-06-08T10:05:33,291   !!

2025-06-08T10:05:33,292           ********************************************************************************
2025-06-08T10:05:33,293           ############################
2025-06-08T10:05:33,293           # Package would be ignored #
2025-06-08T10:05:33,293           ############################
2025-06-08T10:05:33,294           Python recognizes 'multiqc.modules.mapdamage' as an importable package[^1],
2025-06-08T10:05:33,294           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,295           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,296           package, please make sure that 'multiqc.modules.mapdamage' is explicitly added
2025-06-08T10:05:33,296           to the `packages` configuration field.

2025-06-08T10:05:33,297           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,298           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,298           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,299           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,300           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,301           If you don't want 'multiqc.modules.mapdamage' to be distributed and are
2025-06-08T10:05:33,302           already explicitly excluding 'multiqc.modules.mapdamage' via
2025-06-08T10:05:33,302           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,302           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,303           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,304           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,305           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,306           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,307                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,307                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,308                 directory, all directories are treated like packages.
2025-06-08T10:05:33,308           ********************************************************************************

2025-06-08T10:05:33,309   !!
2025-06-08T10:05:33,310     check.warn(importable)
2025-06-08T10:05:33,310   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.megahit' is absent from the `packages` configuration.
2025-06-08T10:05:33,311   !!

2025-06-08T10:05:33,312           ********************************************************************************
2025-06-08T10:05:33,312           ############################
2025-06-08T10:05:33,313           # Package would be ignored #
2025-06-08T10:05:33,313           ############################
2025-06-08T10:05:33,314           Python recognizes 'multiqc.modules.megahit' as an importable package[^1],
2025-06-08T10:05:33,314           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,315           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,316           package, please make sure that 'multiqc.modules.megahit' is explicitly added
2025-06-08T10:05:33,316           to the `packages` configuration field.

2025-06-08T10:05:33,317           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,318           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,318           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,319           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,320           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,321           If you don't want 'multiqc.modules.megahit' to be distributed and are
2025-06-08T10:05:33,321           already explicitly excluding 'multiqc.modules.megahit' via
2025-06-08T10:05:33,322           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,322           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,323           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,324           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,325           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,326           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,327                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,327                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,328                 directory, all directories are treated like packages.
2025-06-08T10:05:33,328           ********************************************************************************

2025-06-08T10:05:33,329   !!
2025-06-08T10:05:33,330     check.warn(importable)
2025-06-08T10:05:33,330   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.metaphlan' is absent from the `packages` configuration.
2025-06-08T10:05:33,331   !!

2025-06-08T10:05:33,332           ********************************************************************************
2025-06-08T10:05:33,332           ############################
2025-06-08T10:05:33,333           # Package would be ignored #
2025-06-08T10:05:33,334           ############################
2025-06-08T10:05:33,334           Python recognizes 'multiqc.modules.metaphlan' as an importable package[^1],
2025-06-08T10:05:33,334           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,335           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,336           package, please make sure that 'multiqc.modules.metaphlan' is explicitly added
2025-06-08T10:05:33,336           to the `packages` configuration field.

2025-06-08T10:05:33,337           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,338           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,338           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,340           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,340           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,341           If you don't want 'multiqc.modules.metaphlan' to be distributed and are
2025-06-08T10:05:33,341           already explicitly excluding 'multiqc.modules.metaphlan' via
2025-06-08T10:05:33,342           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,342           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,343           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,343           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,344           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,345           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,346                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,346                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,347                 directory, all directories are treated like packages.
2025-06-08T10:05:33,347           ********************************************************************************

2025-06-08T10:05:33,348   !!
2025-06-08T10:05:33,348     check.warn(importable)
2025-06-08T10:05:33,349   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.methylqa' is absent from the `packages` configuration.
2025-06-08T10:05:33,349   !!

2025-06-08T10:05:33,350           ********************************************************************************
2025-06-08T10:05:33,351           ############################
2025-06-08T10:05:33,351           # Package would be ignored #
2025-06-08T10:05:33,352           ############################
2025-06-08T10:05:33,352           Python recognizes 'multiqc.modules.methylqa' as an importable package[^1],
2025-06-08T10:05:33,353           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,354           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,354           package, please make sure that 'multiqc.modules.methylqa' is explicitly added
2025-06-08T10:05:33,355           to the `packages` configuration field.

2025-06-08T10:05:33,356           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,356           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,357           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,358           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,359           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,360           If you don't want 'multiqc.modules.methylqa' to be distributed and are
2025-06-08T10:05:33,360           already explicitly excluding 'multiqc.modules.methylqa' via
2025-06-08T10:05:33,361           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,361           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,362           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,363           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,364           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,366           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,366                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,367                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,367                 directory, all directories are treated like packages.
2025-06-08T10:05:33,368           ********************************************************************************

2025-06-08T10:05:33,369   !!
2025-06-08T10:05:33,369     check.warn(importable)
2025-06-08T10:05:33,369   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.mgikit' is absent from the `packages` configuration.
2025-06-08T10:05:33,370   !!

2025-06-08T10:05:33,371           ********************************************************************************
2025-06-08T10:05:33,371           ############################
2025-06-08T10:05:33,371           # Package would be ignored #
2025-06-08T10:05:33,372           ############################
2025-06-08T10:05:33,372           Python recognizes 'multiqc.modules.mgikit' as an importable package[^1],
2025-06-08T10:05:33,373           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,374           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,374           package, please make sure that 'multiqc.modules.mgikit' is explicitly added
2025-06-08T10:05:33,374           to the `packages` configuration field.

2025-06-08T10:05:33,375           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,376           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,376           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,377           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,378           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,379           If you don't want 'multiqc.modules.mgikit' to be distributed and are
2025-06-08T10:05:33,380           already explicitly excluding 'multiqc.modules.mgikit' via
2025-06-08T10:05:33,380           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,381           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,381           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,382           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,383           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,384           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,385                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,385                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,386                 directory, all directories are treated like packages.
2025-06-08T10:05:33,386           ********************************************************************************

2025-06-08T10:05:33,387   !!
2025-06-08T10:05:33,388     check.warn(importable)
2025-06-08T10:05:33,389   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.minionqc' is absent from the `packages` configuration.
2025-06-08T10:05:33,389   !!

2025-06-08T10:05:33,390           ********************************************************************************
2025-06-08T10:05:33,391           ############################
2025-06-08T10:05:33,391           # Package would be ignored #
2025-06-08T10:05:33,392           ############################
2025-06-08T10:05:33,393           Python recognizes 'multiqc.modules.minionqc' as an importable package[^1],
2025-06-08T10:05:33,393           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,394           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,395           package, please make sure that 'multiqc.modules.minionqc' is explicitly added
2025-06-08T10:05:33,395           to the `packages` configuration field.

2025-06-08T10:05:33,396           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,397           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,397           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,398           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,399           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,400           If you don't want 'multiqc.modules.minionqc' to be distributed and are
2025-06-08T10:05:33,400           already explicitly excluding 'multiqc.modules.minionqc' via
2025-06-08T10:05:33,401           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,401           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,402           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,403           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,404           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,405           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,406                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,406                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,407                 directory, all directories are treated like packages.
2025-06-08T10:05:33,407           ********************************************************************************

2025-06-08T10:05:33,408   !!
2025-06-08T10:05:33,409     check.warn(importable)
2025-06-08T10:05:33,409   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.mirtop' is absent from the `packages` configuration.
2025-06-08T10:05:33,410   !!

2025-06-08T10:05:33,411           ********************************************************************************
2025-06-08T10:05:33,411           ############################
2025-06-08T10:05:33,412           # Package would be ignored #
2025-06-08T10:05:33,412           ############################
2025-06-08T10:05:33,413           Python recognizes 'multiqc.modules.mirtop' as an importable package[^1],
2025-06-08T10:05:33,413           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,414           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,415           package, please make sure that 'multiqc.modules.mirtop' is explicitly added
2025-06-08T10:05:33,415           to the `packages` configuration field.

2025-06-08T10:05:33,417           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,417           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,418           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,419           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,420           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,421           If you don't want 'multiqc.modules.mirtop' to be distributed and are
2025-06-08T10:05:33,422           already explicitly excluding 'multiqc.modules.mirtop' via
2025-06-08T10:05:33,422           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,423           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,423           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,425           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,426           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,427           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,428                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,429                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,429                 directory, all directories are treated like packages.
2025-06-08T10:05:33,430           ********************************************************************************

2025-06-08T10:05:33,431   !!
2025-06-08T10:05:33,432     check.warn(importable)
2025-06-08T10:05:33,432   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.mirtrace' is absent from the `packages` configuration.
2025-06-08T10:05:33,433   !!

2025-06-08T10:05:33,434           ********************************************************************************
2025-06-08T10:05:33,434           ############################
2025-06-08T10:05:33,435           # Package would be ignored #
2025-06-08T10:05:33,435           ############################
2025-06-08T10:05:33,435           Python recognizes 'multiqc.modules.mirtrace' as an importable package[^1],
2025-06-08T10:05:33,436           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,437           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,437           package, please make sure that 'multiqc.modules.mirtrace' is explicitly added
2025-06-08T10:05:33,438           to the `packages` configuration field.

2025-06-08T10:05:33,439           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,439           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,439           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,440           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,441           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,442           If you don't want 'multiqc.modules.mirtrace' to be distributed and are
2025-06-08T10:05:33,443           already explicitly excluding 'multiqc.modules.mirtrace' via
2025-06-08T10:05:33,443           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,444           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,444           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,445           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,446           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,447           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,448                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,449                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,449                 directory, all directories are treated like packages.
2025-06-08T10:05:33,450           ********************************************************************************

2025-06-08T10:05:33,451   !!
2025-06-08T10:05:33,451     check.warn(importable)
2025-06-08T10:05:33,451   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.mosaicatcher' is absent from the `packages` configuration.
2025-06-08T10:05:33,452   !!

2025-06-08T10:05:33,453           ********************************************************************************
2025-06-08T10:05:33,453           ############################
2025-06-08T10:05:33,454           # Package would be ignored #
2025-06-08T10:05:33,454           ############################
2025-06-08T10:05:33,455           Python recognizes 'multiqc.modules.mosaicatcher' as an importable package[^1],
2025-06-08T10:05:33,455           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,456           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,457           package, please make sure that 'multiqc.modules.mosaicatcher' is explicitly added
2025-06-08T10:05:33,457           to the `packages` configuration field.

2025-06-08T10:05:33,458           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,458           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,459           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,460           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,461           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,462           If you don't want 'multiqc.modules.mosaicatcher' to be distributed and are
2025-06-08T10:05:33,462           already explicitly excluding 'multiqc.modules.mosaicatcher' via
2025-06-08T10:05:33,463           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,464           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,464           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,465           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,466           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,468           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,469                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,470                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,470                 directory, all directories are treated like packages.
2025-06-08T10:05:33,471           ********************************************************************************

2025-06-08T10:05:33,473   !!
2025-06-08T10:05:33,473     check.warn(importable)
2025-06-08T10:05:33,474   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.mosdepth' is absent from the `packages` configuration.
2025-06-08T10:05:33,475   !!

2025-06-08T10:05:33,476           ********************************************************************************
2025-06-08T10:05:33,477           ############################
2025-06-08T10:05:33,477           # Package would be ignored #
2025-06-08T10:05:33,477           ############################
2025-06-08T10:05:33,478           Python recognizes 'multiqc.modules.mosdepth' as an importable package[^1],
2025-06-08T10:05:33,479           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,479           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,480           package, please make sure that 'multiqc.modules.mosdepth' is explicitly added
2025-06-08T10:05:33,480           to the `packages` configuration field.

2025-06-08T10:05:33,481           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,482           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,482           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,483           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,484           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,486           If you don't want 'multiqc.modules.mosdepth' to be distributed and are
2025-06-08T10:05:33,486           already explicitly excluding 'multiqc.modules.mosdepth' via
2025-06-08T10:05:33,486           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,487           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,487           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,488           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,489           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,490           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,491                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,491                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,492                 directory, all directories are treated like packages.
2025-06-08T10:05:33,492           ********************************************************************************

2025-06-08T10:05:33,493   !!
2025-06-08T10:05:33,493     check.warn(importable)
2025-06-08T10:05:33,494   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.motus' is absent from the `packages` configuration.
2025-06-08T10:05:33,494   !!

2025-06-08T10:05:33,495           ********************************************************************************
2025-06-08T10:05:33,496           ############################
2025-06-08T10:05:33,496           # Package would be ignored #
2025-06-08T10:05:33,497           ############################
2025-06-08T10:05:33,497           Python recognizes 'multiqc.modules.motus' as an importable package[^1],
2025-06-08T10:05:33,498           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,499           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,499           package, please make sure that 'multiqc.modules.motus' is explicitly added
2025-06-08T10:05:33,500           to the `packages` configuration field.

2025-06-08T10:05:33,501           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,501           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,502           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,503           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,504           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,505           If you don't want 'multiqc.modules.motus' to be distributed and are
2025-06-08T10:05:33,506           already explicitly excluding 'multiqc.modules.motus' via
2025-06-08T10:05:33,506           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,507           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,508           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,509           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,510           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,512           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,513                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,513                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,514                 directory, all directories are treated like packages.
2025-06-08T10:05:33,515           ********************************************************************************

2025-06-08T10:05:33,516   !!
2025-06-08T10:05:33,517     check.warn(importable)
2025-06-08T10:05:33,518   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.mtnucratio' is absent from the `packages` configuration.
2025-06-08T10:05:33,518   !!

2025-06-08T10:05:33,519           ********************************************************************************
2025-06-08T10:05:33,520           ############################
2025-06-08T10:05:33,520           # Package would be ignored #
2025-06-08T10:05:33,521           ############################
2025-06-08T10:05:33,521           Python recognizes 'multiqc.modules.mtnucratio' as an importable package[^1],
2025-06-08T10:05:33,521           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,522           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,523           package, please make sure that 'multiqc.modules.mtnucratio' is explicitly added
2025-06-08T10:05:33,523           to the `packages` configuration field.

2025-06-08T10:05:33,524           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,524           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,525           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,526           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,527           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,528           If you don't want 'multiqc.modules.mtnucratio' to be distributed and are
2025-06-08T10:05:33,528           already explicitly excluding 'multiqc.modules.mtnucratio' via
2025-06-08T10:05:33,529           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,529           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,529           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,530           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,531           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,533           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,533                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,534                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,534                 directory, all directories are treated like packages.
2025-06-08T10:05:33,535           ********************************************************************************

2025-06-08T10:05:33,536   !!
2025-06-08T10:05:33,536     check.warn(importable)
2025-06-08T10:05:33,537   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.multivcfanalyzer' is absent from the `packages` configuration.
2025-06-08T10:05:33,537   !!

2025-06-08T10:05:33,538           ********************************************************************************
2025-06-08T10:05:33,539           ############################
2025-06-08T10:05:33,539           # Package would be ignored #
2025-06-08T10:05:33,540           ############################
2025-06-08T10:05:33,540           Python recognizes 'multiqc.modules.multivcfanalyzer' as an importable package[^1],
2025-06-08T10:05:33,541           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,542           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,542           package, please make sure that 'multiqc.modules.multivcfanalyzer' is explicitly added
2025-06-08T10:05:33,543           to the `packages` configuration field.

2025-06-08T10:05:33,544           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,544           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,545           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,546           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,546           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,547           If you don't want 'multiqc.modules.multivcfanalyzer' to be distributed and are
2025-06-08T10:05:33,547           already explicitly excluding 'multiqc.modules.multivcfanalyzer' via
2025-06-08T10:05:33,548           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,548           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,549           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,550           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,550           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,552           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,552                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,553                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,553                 directory, all directories are treated like packages.
2025-06-08T10:05:33,554           ********************************************************************************

2025-06-08T10:05:33,555   !!
2025-06-08T10:05:33,555     check.warn(importable)
2025-06-08T10:05:33,556   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.nanoq' is absent from the `packages` configuration.
2025-06-08T10:05:33,556   !!

2025-06-08T10:05:33,557           ********************************************************************************
2025-06-08T10:05:33,558           ############################
2025-06-08T10:05:33,558           # Package would be ignored #
2025-06-08T10:05:33,559           ############################
2025-06-08T10:05:33,559           Python recognizes 'multiqc.modules.nanoq' as an importable package[^1],
2025-06-08T10:05:33,560           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,561           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,561           package, please make sure that 'multiqc.modules.nanoq' is explicitly added
2025-06-08T10:05:33,562           to the `packages` configuration field.

2025-06-08T10:05:33,563           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,563           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,564           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,565           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,566           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,567           If you don't want 'multiqc.modules.nanoq' to be distributed and are
2025-06-08T10:05:33,567           already explicitly excluding 'multiqc.modules.nanoq' via
2025-06-08T10:05:33,568           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,568           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,569           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,570           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,571           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,572           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,573                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,573                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,574                 directory, all directories are treated like packages.
2025-06-08T10:05:33,574           ********************************************************************************

2025-06-08T10:05:33,575   !!
2025-06-08T10:05:33,575     check.warn(importable)
2025-06-08T10:05:33,576   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.nanostat' is absent from the `packages` configuration.
2025-06-08T10:05:33,576   !!

2025-06-08T10:05:33,577           ********************************************************************************
2025-06-08T10:05:33,578           ############################
2025-06-08T10:05:33,578           # Package would be ignored #
2025-06-08T10:05:33,579           ############################
2025-06-08T10:05:33,579           Python recognizes 'multiqc.modules.nanostat' as an importable package[^1],
2025-06-08T10:05:33,579           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,580           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,581           package, please make sure that 'multiqc.modules.nanostat' is explicitly added
2025-06-08T10:05:33,581           to the `packages` configuration field.

2025-06-08T10:05:33,582           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,583           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,583           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,584           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,585           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,586           If you don't want 'multiqc.modules.nanostat' to be distributed and are
2025-06-08T10:05:33,587           already explicitly excluding 'multiqc.modules.nanostat' via
2025-06-08T10:05:33,587           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,588           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,588           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,589           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,590           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,592           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,592                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,593                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,593                 directory, all directories are treated like packages.
2025-06-08T10:05:33,594           ********************************************************************************

2025-06-08T10:05:33,595   !!
2025-06-08T10:05:33,595     check.warn(importable)
2025-06-08T10:05:33,596   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.nextclade' is absent from the `packages` configuration.
2025-06-08T10:05:33,596   !!

2025-06-08T10:05:33,598           ********************************************************************************
2025-06-08T10:05:33,598           ############################
2025-06-08T10:05:33,599           # Package would be ignored #
2025-06-08T10:05:33,599           ############################
2025-06-08T10:05:33,600           Python recognizes 'multiqc.modules.nextclade' as an importable package[^1],
2025-06-08T10:05:33,600           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,601           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,602           package, please make sure that 'multiqc.modules.nextclade' is explicitly added
2025-06-08T10:05:33,602           to the `packages` configuration field.

2025-06-08T10:05:33,603           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,603           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,604           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,605           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,605           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,606           If you don't want 'multiqc.modules.nextclade' to be distributed and are
2025-06-08T10:05:33,607           already explicitly excluding 'multiqc.modules.nextclade' via
2025-06-08T10:05:33,607           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,608           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,608           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,609           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,610           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,611           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,612                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,612                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,613                 directory, all directories are treated like packages.
2025-06-08T10:05:33,613           ********************************************************************************

2025-06-08T10:05:33,614   !!
2025-06-08T10:05:33,615     check.warn(importable)
2025-06-08T10:05:33,615   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.ngsbits' is absent from the `packages` configuration.
2025-06-08T10:05:33,616   !!

2025-06-08T10:05:33,617           ********************************************************************************
2025-06-08T10:05:33,618           ############################
2025-06-08T10:05:33,618           # Package would be ignored #
2025-06-08T10:05:33,619           ############################
2025-06-08T10:05:33,619           Python recognizes 'multiqc.modules.ngsbits' as an importable package[^1],
2025-06-08T10:05:33,620           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,621           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,621           package, please make sure that 'multiqc.modules.ngsbits' is explicitly added
2025-06-08T10:05:33,622           to the `packages` configuration field.

2025-06-08T10:05:33,623           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,623           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,624           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,625           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,626           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,627           If you don't want 'multiqc.modules.ngsbits' to be distributed and are
2025-06-08T10:05:33,627           already explicitly excluding 'multiqc.modules.ngsbits' via
2025-06-08T10:05:33,628           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,628           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,629           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,630           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,631           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,632           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,633                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,633                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,633                 directory, all directories are treated like packages.
2025-06-08T10:05:33,634           ********************************************************************************

2025-06-08T10:05:33,635   !!
2025-06-08T10:05:33,635     check.warn(importable)
2025-06-08T10:05:33,636   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.ngsderive' is absent from the `packages` configuration.
2025-06-08T10:05:33,636   !!

2025-06-08T10:05:33,637           ********************************************************************************
2025-06-08T10:05:33,637           ############################
2025-06-08T10:05:33,638           # Package would be ignored #
2025-06-08T10:05:33,638           ############################
2025-06-08T10:05:33,639           Python recognizes 'multiqc.modules.ngsderive' as an importable package[^1],
2025-06-08T10:05:33,639           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,640           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,640           package, please make sure that 'multiqc.modules.ngsderive' is explicitly added
2025-06-08T10:05:33,641           to the `packages` configuration field.

2025-06-08T10:05:33,642           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,642           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,643           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,644           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,645           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,646           If you don't want 'multiqc.modules.ngsderive' to be distributed and are
2025-06-08T10:05:33,646           already explicitly excluding 'multiqc.modules.ngsderive' via
2025-06-08T10:05:33,647           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,647           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,648           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,649           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,650           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,651           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,652                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,652                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,653                 directory, all directories are treated like packages.
2025-06-08T10:05:33,653           ********************************************************************************

2025-06-08T10:05:33,654   !!
2025-06-08T10:05:33,655     check.warn(importable)
2025-06-08T10:05:33,655   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.nonpareil' is absent from the `packages` configuration.
2025-06-08T10:05:33,656   !!

2025-06-08T10:05:33,657           ********************************************************************************
2025-06-08T10:05:33,657           ############################
2025-06-08T10:05:33,658           # Package would be ignored #
2025-06-08T10:05:33,658           ############################
2025-06-08T10:05:33,659           Python recognizes 'multiqc.modules.nonpareil' as an importable package[^1],
2025-06-08T10:05:33,659           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,660           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,660           package, please make sure that 'multiqc.modules.nonpareil' is explicitly added
2025-06-08T10:05:33,661           to the `packages` configuration field.

2025-06-08T10:05:33,662           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,662           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,663           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,663           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,664           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,665           If you don't want 'multiqc.modules.nonpareil' to be distributed and are
2025-06-08T10:05:33,666           already explicitly excluding 'multiqc.modules.nonpareil' via
2025-06-08T10:05:33,666           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,666           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,667           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,668           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,669           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,670           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,671                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,671                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,672                 directory, all directories are treated like packages.
2025-06-08T10:05:33,672           ********************************************************************************

2025-06-08T10:05:33,673   !!
2025-06-08T10:05:33,674     check.warn(importable)
2025-06-08T10:05:33,674   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.odgi' is absent from the `packages` configuration.
2025-06-08T10:05:33,675   !!

2025-06-08T10:05:33,676           ********************************************************************************
2025-06-08T10:05:33,676           ############################
2025-06-08T10:05:33,677           # Package would be ignored #
2025-06-08T10:05:33,677           ############################
2025-06-08T10:05:33,678           Python recognizes 'multiqc.modules.odgi' as an importable package[^1],
2025-06-08T10:05:33,678           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,679           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,680           package, please make sure that 'multiqc.modules.odgi' is explicitly added
2025-06-08T10:05:33,680           to the `packages` configuration field.

2025-06-08T10:05:33,681           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,682           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,682           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,684           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,685           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,685           If you don't want 'multiqc.modules.odgi' to be distributed and are
2025-06-08T10:05:33,686           already explicitly excluding 'multiqc.modules.odgi' via
2025-06-08T10:05:33,686           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,686           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,687           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,688           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,689           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,690           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,690                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,691                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,691                 directory, all directories are treated like packages.
2025-06-08T10:05:33,691           ********************************************************************************

2025-06-08T10:05:33,692   !!
2025-06-08T10:05:33,693     check.warn(importable)
2025-06-08T10:05:33,693   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.optitype' is absent from the `packages` configuration.
2025-06-08T10:05:33,693   !!

2025-06-08T10:05:33,694           ********************************************************************************
2025-06-08T10:05:33,695           ############################
2025-06-08T10:05:33,695           # Package would be ignored #
2025-06-08T10:05:33,696           ############################
2025-06-08T10:05:33,696           Python recognizes 'multiqc.modules.optitype' as an importable package[^1],
2025-06-08T10:05:33,697           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,698           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,698           package, please make sure that 'multiqc.modules.optitype' is explicitly added
2025-06-08T10:05:33,699           to the `packages` configuration field.

2025-06-08T10:05:33,700           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,700           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,701           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,701           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,702           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,703           If you don't want 'multiqc.modules.optitype' to be distributed and are
2025-06-08T10:05:33,704           already explicitly excluding 'multiqc.modules.optitype' via
2025-06-08T10:05:33,705           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,705           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,706           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,707           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,708           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,710           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,710                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,711                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,711                 directory, all directories are treated like packages.
2025-06-08T10:05:33,712           ********************************************************************************

2025-06-08T10:05:33,713   !!
2025-06-08T10:05:33,713     check.warn(importable)
2025-06-08T10:05:33,714   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.pairtools' is absent from the `packages` configuration.
2025-06-08T10:05:33,714   !!

2025-06-08T10:05:33,715           ********************************************************************************
2025-06-08T10:05:33,716           ############################
2025-06-08T10:05:33,716           # Package would be ignored #
2025-06-08T10:05:33,716           ############################
2025-06-08T10:05:33,717           Python recognizes 'multiqc.modules.pairtools' as an importable package[^1],
2025-06-08T10:05:33,717           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,718           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,719           package, please make sure that 'multiqc.modules.pairtools' is explicitly added
2025-06-08T10:05:33,719           to the `packages` configuration field.

2025-06-08T10:05:33,720           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,721           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,721           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,722           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,723           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,724           If you don't want 'multiqc.modules.pairtools' to be distributed and are
2025-06-08T10:05:33,724           already explicitly excluding 'multiqc.modules.pairtools' via
2025-06-08T10:05:33,725           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,725           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,726           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,727           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,728           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,730           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,730                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,730                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,731                 directory, all directories are treated like packages.
2025-06-08T10:05:33,731           ********************************************************************************

2025-06-08T10:05:33,732   !!
2025-06-08T10:05:33,733     check.warn(importable)
2025-06-08T10:05:33,733   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.pangolin' is absent from the `packages` configuration.
2025-06-08T10:05:33,734   !!

2025-06-08T10:05:33,735           ********************************************************************************
2025-06-08T10:05:33,735           ############################
2025-06-08T10:05:33,736           # Package would be ignored #
2025-06-08T10:05:33,737           ############################
2025-06-08T10:05:33,737           Python recognizes 'multiqc.modules.pangolin' as an importable package[^1],
2025-06-08T10:05:33,738           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,739           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,739           package, please make sure that 'multiqc.modules.pangolin' is explicitly added
2025-06-08T10:05:33,740           to the `packages` configuration field.

2025-06-08T10:05:33,741           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,741           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,742           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,742           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,743           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,744           If you don't want 'multiqc.modules.pangolin' to be distributed and are
2025-06-08T10:05:33,745           already explicitly excluding 'multiqc.modules.pangolin' via
2025-06-08T10:05:33,745           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,746           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,746           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,747           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,748           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,749           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,750                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,750                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,751                 directory, all directories are treated like packages.
2025-06-08T10:05:33,751           ********************************************************************************

2025-06-08T10:05:33,752   !!
2025-06-08T10:05:33,753     check.warn(importable)
2025-06-08T10:05:33,753   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.pbmarkdup' is absent from the `packages` configuration.
2025-06-08T10:05:33,754   !!

2025-06-08T10:05:33,755           ********************************************************************************
2025-06-08T10:05:33,755           ############################
2025-06-08T10:05:33,756           # Package would be ignored #
2025-06-08T10:05:33,756           ############################
2025-06-08T10:05:33,757           Python recognizes 'multiqc.modules.pbmarkdup' as an importable package[^1],
2025-06-08T10:05:33,757           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,758           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,759           package, please make sure that 'multiqc.modules.pbmarkdup' is explicitly added
2025-06-08T10:05:33,759           to the `packages` configuration field.

2025-06-08T10:05:33,760           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,761           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,761           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,762           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,763           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,764           If you don't want 'multiqc.modules.pbmarkdup' to be distributed and are
2025-06-08T10:05:33,765           already explicitly excluding 'multiqc.modules.pbmarkdup' via
2025-06-08T10:05:33,765           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,766           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,766           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,768           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,768           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,770           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,770                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,771                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,771                 directory, all directories are treated like packages.
2025-06-08T10:05:33,771           ********************************************************************************

2025-06-08T10:05:33,772   !!
2025-06-08T10:05:33,773     check.warn(importable)
2025-06-08T10:05:33,773   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.peddy' is absent from the `packages` configuration.
2025-06-08T10:05:33,773   !!

2025-06-08T10:05:33,774           ********************************************************************************
2025-06-08T10:05:33,775           ############################
2025-06-08T10:05:33,775           # Package would be ignored #
2025-06-08T10:05:33,776           ############################
2025-06-08T10:05:33,776           Python recognizes 'multiqc.modules.peddy' as an importable package[^1],
2025-06-08T10:05:33,776           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,777           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,778           package, please make sure that 'multiqc.modules.peddy' is explicitly added
2025-06-08T10:05:33,778           to the `packages` configuration field.

2025-06-08T10:05:33,779           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,780           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,780           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,781           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,782           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,783           If you don't want 'multiqc.modules.peddy' to be distributed and are
2025-06-08T10:05:33,784           already explicitly excluding 'multiqc.modules.peddy' via
2025-06-08T10:05:33,785           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,785           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,786           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,787           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,788           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,789           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,790                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,790                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,791                 directory, all directories are treated like packages.
2025-06-08T10:05:33,791           ********************************************************************************

2025-06-08T10:05:33,792   !!
2025-06-08T10:05:33,793     check.warn(importable)
2025-06-08T10:05:33,793   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.percolator' is absent from the `packages` configuration.
2025-06-08T10:05:33,794   !!

2025-06-08T10:05:33,795           ********************************************************************************
2025-06-08T10:05:33,795           ############################
2025-06-08T10:05:33,796           # Package would be ignored #
2025-06-08T10:05:33,796           ############################
2025-06-08T10:05:33,797           Python recognizes 'multiqc.modules.percolator' as an importable package[^1],
2025-06-08T10:05:33,797           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,798           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,798           package, please make sure that 'multiqc.modules.percolator' is explicitly added
2025-06-08T10:05:33,799           to the `packages` configuration field.

2025-06-08T10:05:33,800           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,800           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,801           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,801           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,802           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,803           If you don't want 'multiqc.modules.percolator' to be distributed and are
2025-06-08T10:05:33,804           already explicitly excluding 'multiqc.modules.percolator' via
2025-06-08T10:05:33,804           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,805           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,805           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,806           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,807           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,808           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,809                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,809                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,810                 directory, all directories are treated like packages.
2025-06-08T10:05:33,810           ********************************************************************************

2025-06-08T10:05:33,811   !!
2025-06-08T10:05:33,812     check.warn(importable)
2025-06-08T10:05:33,812   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.phantompeakqualtools' is absent from the `packages` configuration.
2025-06-08T10:05:33,813   !!

2025-06-08T10:05:33,814           ********************************************************************************
2025-06-08T10:05:33,814           ############################
2025-06-08T10:05:33,815           # Package would be ignored #
2025-06-08T10:05:33,815           ############################
2025-06-08T10:05:33,816           Python recognizes 'multiqc.modules.phantompeakqualtools' as an importable package[^1],
2025-06-08T10:05:33,816           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,817           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,818           package, please make sure that 'multiqc.modules.phantompeakqualtools' is explicitly added
2025-06-08T10:05:33,818           to the `packages` configuration field.

2025-06-08T10:05:33,819           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,820           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,820           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,821           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,822           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,823           If you don't want 'multiqc.modules.phantompeakqualtools' to be distributed and are
2025-06-08T10:05:33,823           already explicitly excluding 'multiqc.modules.phantompeakqualtools' via
2025-06-08T10:05:33,824           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,824           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,825           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,826           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,826           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,828           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,828                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,829                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,829                 directory, all directories are treated like packages.
2025-06-08T10:05:33,829           ********************************************************************************

2025-06-08T10:05:33,830   !!
2025-06-08T10:05:33,831     check.warn(importable)
2025-06-08T10:05:33,831   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.picard' is absent from the `packages` configuration.
2025-06-08T10:05:33,832   !!

2025-06-08T10:05:33,832           ********************************************************************************
2025-06-08T10:05:33,833           ############################
2025-06-08T10:05:33,833           # Package would be ignored #
2025-06-08T10:05:33,834           ############################
2025-06-08T10:05:33,834           Python recognizes 'multiqc.modules.picard' as an importable package[^1],
2025-06-08T10:05:33,835           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,836           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,836           package, please make sure that 'multiqc.modules.picard' is explicitly added
2025-06-08T10:05:33,837           to the `packages` configuration field.

2025-06-08T10:05:33,838           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,838           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,839           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,840           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,841           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,842           If you don't want 'multiqc.modules.picard' to be distributed and are
2025-06-08T10:05:33,842           already explicitly excluding 'multiqc.modules.picard' via
2025-06-08T10:05:33,843           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,843           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,844           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,845           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,846           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,847           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,848                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,849                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,849                 directory, all directories are treated like packages.
2025-06-08T10:05:33,850           ********************************************************************************

2025-06-08T10:05:33,851   !!
2025-06-08T10:05:33,851     check.warn(importable)
2025-06-08T10:05:33,852   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.picard.tests' is absent from the `packages` configuration.
2025-06-08T10:05:33,852   !!

2025-06-08T10:05:33,853           ********************************************************************************
2025-06-08T10:05:33,853           ############################
2025-06-08T10:05:33,854           # Package would be ignored #
2025-06-08T10:05:33,854           ############################
2025-06-08T10:05:33,854           Python recognizes 'multiqc.modules.picard.tests' as an importable package[^1],
2025-06-08T10:05:33,855           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,856           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,856           package, please make sure that 'multiqc.modules.picard.tests' is explicitly added
2025-06-08T10:05:33,856           to the `packages` configuration field.

2025-06-08T10:05:33,857           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,858           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,858           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,859           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,860           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,861           If you don't want 'multiqc.modules.picard.tests' to be distributed and are
2025-06-08T10:05:33,862           already explicitly excluding 'multiqc.modules.picard.tests' via
2025-06-08T10:05:33,862           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,863           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,863           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,864           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,865           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,866           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,867                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,867                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,868                 directory, all directories are treated like packages.
2025-06-08T10:05:33,868           ********************************************************************************

2025-06-08T10:05:33,869   !!
2025-06-08T10:05:33,870     check.warn(importable)
2025-06-08T10:05:33,870   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.porechop' is absent from the `packages` configuration.
2025-06-08T10:05:33,871   !!

2025-06-08T10:05:33,871           ********************************************************************************
2025-06-08T10:05:33,872           ############################
2025-06-08T10:05:33,872           # Package would be ignored #
2025-06-08T10:05:33,873           ############################
2025-06-08T10:05:33,873           Python recognizes 'multiqc.modules.porechop' as an importable package[^1],
2025-06-08T10:05:33,874           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,875           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,875           package, please make sure that 'multiqc.modules.porechop' is explicitly added
2025-06-08T10:05:33,876           to the `packages` configuration field.

2025-06-08T10:05:33,877           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,877           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,878           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,879           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,880           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,880           If you don't want 'multiqc.modules.porechop' to be distributed and are
2025-06-08T10:05:33,881           already explicitly excluding 'multiqc.modules.porechop' via
2025-06-08T10:05:33,881           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,882           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,882           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,883           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,884           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,885           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,886                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,886                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,886                 directory, all directories are treated like packages.
2025-06-08T10:05:33,887           ********************************************************************************

2025-06-08T10:05:33,888   !!
2025-06-08T10:05:33,888     check.warn(importable)
2025-06-08T10:05:33,889   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.preseq' is absent from the `packages` configuration.
2025-06-08T10:05:33,889   !!

2025-06-08T10:05:33,890           ********************************************************************************
2025-06-08T10:05:33,891           ############################
2025-06-08T10:05:33,891           # Package would be ignored #
2025-06-08T10:05:33,892           ############################
2025-06-08T10:05:33,892           Python recognizes 'multiqc.modules.preseq' as an importable package[^1],
2025-06-08T10:05:33,893           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,894           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,894           package, please make sure that 'multiqc.modules.preseq' is explicitly added
2025-06-08T10:05:33,895           to the `packages` configuration field.

2025-06-08T10:05:33,896           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,896           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,897           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,898           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,899           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,900           If you don't want 'multiqc.modules.preseq' to be distributed and are
2025-06-08T10:05:33,901           already explicitly excluding 'multiqc.modules.preseq' via
2025-06-08T10:05:33,901           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,901           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,902           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,903           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,904           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,906           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,906                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,907                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,907                 directory, all directories are treated like packages.
2025-06-08T10:05:33,907           ********************************************************************************

2025-06-08T10:05:33,908   !!
2025-06-08T10:05:33,909     check.warn(importable)
2025-06-08T10:05:33,909   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.prinseqplusplus' is absent from the `packages` configuration.
2025-06-08T10:05:33,909   !!

2025-06-08T10:05:33,910           ********************************************************************************
2025-06-08T10:05:33,911           ############################
2025-06-08T10:05:33,911           # Package would be ignored #
2025-06-08T10:05:33,911           ############################
2025-06-08T10:05:33,912           Python recognizes 'multiqc.modules.prinseqplusplus' as an importable package[^1],
2025-06-08T10:05:33,912           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,913           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,914           package, please make sure that 'multiqc.modules.prinseqplusplus' is explicitly added
2025-06-08T10:05:33,914           to the `packages` configuration field.

2025-06-08T10:05:33,915           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,915           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,916           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,917           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,918           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,919           If you don't want 'multiqc.modules.prinseqplusplus' to be distributed and are
2025-06-08T10:05:33,919           already explicitly excluding 'multiqc.modules.prinseqplusplus' via
2025-06-08T10:05:33,920           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,920           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,921           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,922           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,923           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,925           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,925                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,926                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,926                 directory, all directories are treated like packages.
2025-06-08T10:05:33,927           ********************************************************************************

2025-06-08T10:05:33,928   !!
2025-06-08T10:05:33,928     check.warn(importable)
2025-06-08T10:05:33,929   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.prokka' is absent from the `packages` configuration.
2025-06-08T10:05:33,929   !!

2025-06-08T10:05:33,930           ********************************************************************************
2025-06-08T10:05:33,931           ############################
2025-06-08T10:05:33,931           # Package would be ignored #
2025-06-08T10:05:33,932           ############################
2025-06-08T10:05:33,932           Python recognizes 'multiqc.modules.prokka' as an importable package[^1],
2025-06-08T10:05:33,933           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,934           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,935           package, please make sure that 'multiqc.modules.prokka' is explicitly added
2025-06-08T10:05:33,935           to the `packages` configuration field.

2025-06-08T10:05:33,936           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,937           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,937           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,938           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,939           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,940           If you don't want 'multiqc.modules.prokka' to be distributed and are
2025-06-08T10:05:33,940           already explicitly excluding 'multiqc.modules.prokka' via
2025-06-08T10:05:33,941           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,941           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,942           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,943           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,944           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,945           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,945                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,946                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,946                 directory, all directories are treated like packages.
2025-06-08T10:05:33,947           ********************************************************************************

2025-06-08T10:05:33,948   !!
2025-06-08T10:05:33,948     check.warn(importable)
2025-06-08T10:05:33,949   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.purple' is absent from the `packages` configuration.
2025-06-08T10:05:33,950   !!

2025-06-08T10:05:33,950           ********************************************************************************
2025-06-08T10:05:33,951           ############################
2025-06-08T10:05:33,951           # Package would be ignored #
2025-06-08T10:05:33,952           ############################
2025-06-08T10:05:33,953           Python recognizes 'multiqc.modules.purple' as an importable package[^1],
2025-06-08T10:05:33,953           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,954           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,955           package, please make sure that 'multiqc.modules.purple' is explicitly added
2025-06-08T10:05:33,955           to the `packages` configuration field.

2025-06-08T10:05:33,956           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,957           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,957           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,958           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,959           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,960           If you don't want 'multiqc.modules.purple' to be distributed and are
2025-06-08T10:05:33,961           already explicitly excluding 'multiqc.modules.purple' via
2025-06-08T10:05:33,961           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,962           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,963           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,964           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,965           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,966           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,966                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,967                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,967                 directory, all directories are treated like packages.
2025-06-08T10:05:33,968           ********************************************************************************

2025-06-08T10:05:33,969   !!
2025-06-08T10:05:33,969     check.warn(importable)
2025-06-08T10:05:33,970   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.pychopper' is absent from the `packages` configuration.
2025-06-08T10:05:33,970   !!

2025-06-08T10:05:33,971           ********************************************************************************
2025-06-08T10:05:33,972           ############################
2025-06-08T10:05:33,972           # Package would be ignored #
2025-06-08T10:05:33,973           ############################
2025-06-08T10:05:33,973           Python recognizes 'multiqc.modules.pychopper' as an importable package[^1],
2025-06-08T10:05:33,974           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,975           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,975           package, please make sure that 'multiqc.modules.pychopper' is explicitly added
2025-06-08T10:05:33,976           to the `packages` configuration field.

2025-06-08T10:05:33,977           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,977           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:33,978           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:33,979           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:33,980           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:33,981           If you don't want 'multiqc.modules.pychopper' to be distributed and are
2025-06-08T10:05:33,982           already explicitly excluding 'multiqc.modules.pychopper' via
2025-06-08T10:05:33,982           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:33,983           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:33,983           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:33,984           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:33,986           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:33,987           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:33,988                 even if it does not contain any `.py` files.
2025-06-08T10:05:33,988                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:33,989                 directory, all directories are treated like packages.
2025-06-08T10:05:33,990           ********************************************************************************

2025-06-08T10:05:33,991   !!
2025-06-08T10:05:33,991     check.warn(importable)
2025-06-08T10:05:33,992   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.pycoqc' is absent from the `packages` configuration.
2025-06-08T10:05:33,992   !!

2025-06-08T10:05:33,994           ********************************************************************************
2025-06-08T10:05:33,994           ############################
2025-06-08T10:05:33,995           # Package would be ignored #
2025-06-08T10:05:33,995           ############################
2025-06-08T10:05:33,996           Python recognizes 'multiqc.modules.pycoqc' as an importable package[^1],
2025-06-08T10:05:33,996           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:33,997           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:33,997           package, please make sure that 'multiqc.modules.pycoqc' is explicitly added
2025-06-08T10:05:33,998           to the `packages` configuration field.

2025-06-08T10:05:33,999           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:33,999           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,000           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,001           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,002           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,002           If you don't want 'multiqc.modules.pycoqc' to be distributed and are
2025-06-08T10:05:34,003           already explicitly excluding 'multiqc.modules.pycoqc' via
2025-06-08T10:05:34,003           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,004           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,004           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,006           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,007           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,008           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,009                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,009                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,010                 directory, all directories are treated like packages.
2025-06-08T10:05:34,010           ********************************************************************************

2025-06-08T10:05:34,011   !!
2025-06-08T10:05:34,012     check.warn(importable)
2025-06-08T10:05:34,012   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.qc3C' is absent from the `packages` configuration.
2025-06-08T10:05:34,013   !!

2025-06-08T10:05:34,014           ********************************************************************************
2025-06-08T10:05:34,014           ############################
2025-06-08T10:05:34,015           # Package would be ignored #
2025-06-08T10:05:34,016           ############################
2025-06-08T10:05:34,016           Python recognizes 'multiqc.modules.qc3C' as an importable package[^1],
2025-06-08T10:05:34,017           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,018           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,019           package, please make sure that 'multiqc.modules.qc3C' is explicitly added
2025-06-08T10:05:34,019           to the `packages` configuration field.

2025-06-08T10:05:34,020           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,021           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,021           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,023           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,023           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,024           If you don't want 'multiqc.modules.qc3C' to be distributed and are
2025-06-08T10:05:34,025           already explicitly excluding 'multiqc.modules.qc3C' via
2025-06-08T10:05:34,025           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,026           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,026           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,027           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,028           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,029           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,030                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,030                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,031                 directory, all directories are treated like packages.
2025-06-08T10:05:34,031           ********************************************************************************

2025-06-08T10:05:34,032   !!
2025-06-08T10:05:34,033     check.warn(importable)
2025-06-08T10:05:34,033   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.qorts' is absent from the `packages` configuration.
2025-06-08T10:05:34,034   !!

2025-06-08T10:05:34,035           ********************************************************************************
2025-06-08T10:05:34,035           ############################
2025-06-08T10:05:34,036           # Package would be ignored #
2025-06-08T10:05:34,036           ############################
2025-06-08T10:05:34,037           Python recognizes 'multiqc.modules.qorts' as an importable package[^1],
2025-06-08T10:05:34,037           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,038           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,039           package, please make sure that 'multiqc.modules.qorts' is explicitly added
2025-06-08T10:05:34,039           to the `packages` configuration field.

2025-06-08T10:05:34,040           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,041           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,041           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,042           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,043           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,045           If you don't want 'multiqc.modules.qorts' to be distributed and are
2025-06-08T10:05:34,045           already explicitly excluding 'multiqc.modules.qorts' via
2025-06-08T10:05:34,046           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,046           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,047           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,048           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,049           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,051           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,051                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,052                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,052                 directory, all directories are treated like packages.
2025-06-08T10:05:34,053           ********************************************************************************

2025-06-08T10:05:34,054   !!
2025-06-08T10:05:34,054     check.warn(importable)
2025-06-08T10:05:34,055   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.qualimap' is absent from the `packages` configuration.
2025-06-08T10:05:34,055   !!

2025-06-08T10:05:34,056           ********************************************************************************
2025-06-08T10:05:34,057           ############################
2025-06-08T10:05:34,057           # Package would be ignored #
2025-06-08T10:05:34,058           ############################
2025-06-08T10:05:34,058           Python recognizes 'multiqc.modules.qualimap' as an importable package[^1],
2025-06-08T10:05:34,058           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,059           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,060           package, please make sure that 'multiqc.modules.qualimap' is explicitly added
2025-06-08T10:05:34,060           to the `packages` configuration field.

2025-06-08T10:05:34,061           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,062           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,062           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,063           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,064           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,065           If you don't want 'multiqc.modules.qualimap' to be distributed and are
2025-06-08T10:05:34,066           already explicitly excluding 'multiqc.modules.qualimap' via
2025-06-08T10:05:34,066           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,067           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,067           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,068           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,069           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,071           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,071                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,072                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,072                 directory, all directories are treated like packages.
2025-06-08T10:05:34,073           ********************************************************************************

2025-06-08T10:05:34,074   !!
2025-06-08T10:05:34,075     check.warn(importable)
2025-06-08T10:05:34,075   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.quast' is absent from the `packages` configuration.
2025-06-08T10:05:34,076   !!

2025-06-08T10:05:34,077           ********************************************************************************
2025-06-08T10:05:34,077           ############################
2025-06-08T10:05:34,078           # Package would be ignored #
2025-06-08T10:05:34,078           ############################
2025-06-08T10:05:34,079           Python recognizes 'multiqc.modules.quast' as an importable package[^1],
2025-06-08T10:05:34,079           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,081           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,081           package, please make sure that 'multiqc.modules.quast' is explicitly added
2025-06-08T10:05:34,082           to the `packages` configuration field.

2025-06-08T10:05:34,083           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,083           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,084           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,085           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,086           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,087           If you don't want 'multiqc.modules.quast' to be distributed and are
2025-06-08T10:05:34,087           already explicitly excluding 'multiqc.modules.quast' via
2025-06-08T10:05:34,088           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,088           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,089           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,089           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,090           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,092           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,092                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,093                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,093                 directory, all directories are treated like packages.
2025-06-08T10:05:34,094           ********************************************************************************

2025-06-08T10:05:34,095   !!
2025-06-08T10:05:34,095     check.warn(importable)
2025-06-08T10:05:34,096   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.rna_seqc' is absent from the `packages` configuration.
2025-06-08T10:05:34,097   !!

2025-06-08T10:05:34,098           ********************************************************************************
2025-06-08T10:05:34,098           ############################
2025-06-08T10:05:34,099           # Package would be ignored #
2025-06-08T10:05:34,100           ############################
2025-06-08T10:05:34,100           Python recognizes 'multiqc.modules.rna_seqc' as an importable package[^1],
2025-06-08T10:05:34,101           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,102           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,102           package, please make sure that 'multiqc.modules.rna_seqc' is explicitly added
2025-06-08T10:05:34,103           to the `packages` configuration field.

2025-06-08T10:05:34,104           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,104           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,105           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,106           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,107           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,108           If you don't want 'multiqc.modules.rna_seqc' to be distributed and are
2025-06-08T10:05:34,109           already explicitly excluding 'multiqc.modules.rna_seqc' via
2025-06-08T10:05:34,109           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,110           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,110           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,112           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,113           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,114           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,114                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,115                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,115                 directory, all directories are treated like packages.
2025-06-08T10:05:34,116           ********************************************************************************

2025-06-08T10:05:34,116   !!
2025-06-08T10:05:34,117     check.warn(importable)
2025-06-08T10:05:34,117   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.rockhopper' is absent from the `packages` configuration.
2025-06-08T10:05:34,118   !!

2025-06-08T10:05:34,119           ********************************************************************************
2025-06-08T10:05:34,119           ############################
2025-06-08T10:05:34,119           # Package would be ignored #
2025-06-08T10:05:34,120           ############################
2025-06-08T10:05:34,120           Python recognizes 'multiqc.modules.rockhopper' as an importable package[^1],
2025-06-08T10:05:34,121           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,122           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,122           package, please make sure that 'multiqc.modules.rockhopper' is explicitly added
2025-06-08T10:05:34,123           to the `packages` configuration field.

2025-06-08T10:05:34,124           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,124           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,125           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,126           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,127           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,127           If you don't want 'multiqc.modules.rockhopper' to be distributed and are
2025-06-08T10:05:34,128           already explicitly excluding 'multiqc.modules.rockhopper' via
2025-06-08T10:05:34,128           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,129           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,129           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,130           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,131           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,133           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,133                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,134                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,135                 directory, all directories are treated like packages.
2025-06-08T10:05:34,135           ********************************************************************************

2025-06-08T10:05:34,136   !!
2025-06-08T10:05:34,137     check.warn(importable)
2025-06-08T10:05:34,137   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.rsem' is absent from the `packages` configuration.
2025-06-08T10:05:34,138   !!

2025-06-08T10:05:34,139           ********************************************************************************
2025-06-08T10:05:34,139           ############################
2025-06-08T10:05:34,140           # Package would be ignored #
2025-06-08T10:05:34,141           ############################
2025-06-08T10:05:34,141           Python recognizes 'multiqc.modules.rsem' as an importable package[^1],
2025-06-08T10:05:34,142           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,143           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,143           package, please make sure that 'multiqc.modules.rsem' is explicitly added
2025-06-08T10:05:34,143           to the `packages` configuration field.

2025-06-08T10:05:34,144           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,145           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,145           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,146           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,147           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,148           If you don't want 'multiqc.modules.rsem' to be distributed and are
2025-06-08T10:05:34,148           already explicitly excluding 'multiqc.modules.rsem' via
2025-06-08T10:05:34,149           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,149           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,150           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,151           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,152           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,153           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,154                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,154                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,155                 directory, all directories are treated like packages.
2025-06-08T10:05:34,155           ********************************************************************************

2025-06-08T10:05:34,156   !!
2025-06-08T10:05:34,157     check.warn(importable)
2025-06-08T10:05:34,157   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.rseqc' is absent from the `packages` configuration.
2025-06-08T10:05:34,158   !!

2025-06-08T10:05:34,159           ********************************************************************************
2025-06-08T10:05:34,159           ############################
2025-06-08T10:05:34,160           # Package would be ignored #
2025-06-08T10:05:34,160           ############################
2025-06-08T10:05:34,161           Python recognizes 'multiqc.modules.rseqc' as an importable package[^1],
2025-06-08T10:05:34,161           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,163           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,163           package, please make sure that 'multiqc.modules.rseqc' is explicitly added
2025-06-08T10:05:34,164           to the `packages` configuration field.

2025-06-08T10:05:34,165           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,165           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,166           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,167           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,168           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,169           If you don't want 'multiqc.modules.rseqc' to be distributed and are
2025-06-08T10:05:34,169           already explicitly excluding 'multiqc.modules.rseqc' via
2025-06-08T10:05:34,170           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,171           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,171           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,172           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,173           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,174           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,175                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,175                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,176                 directory, all directories are treated like packages.
2025-06-08T10:05:34,176           ********************************************************************************

2025-06-08T10:05:34,177   !!
2025-06-08T10:05:34,178     check.warn(importable)
2025-06-08T10:05:34,178   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.salmon' is absent from the `packages` configuration.
2025-06-08T10:05:34,179   !!

2025-06-08T10:05:34,180           ********************************************************************************
2025-06-08T10:05:34,180           ############################
2025-06-08T10:05:34,181           # Package would be ignored #
2025-06-08T10:05:34,181           ############################
2025-06-08T10:05:34,182           Python recognizes 'multiqc.modules.salmon' as an importable package[^1],
2025-06-08T10:05:34,182           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,183           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,184           package, please make sure that 'multiqc.modules.salmon' is explicitly added
2025-06-08T10:05:34,184           to the `packages` configuration field.

2025-06-08T10:05:34,185           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,186           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,186           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,187           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,188           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,189           If you don't want 'multiqc.modules.salmon' to be distributed and are
2025-06-08T10:05:34,190           already explicitly excluding 'multiqc.modules.salmon' via
2025-06-08T10:05:34,190           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,191           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,191           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,192           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,193           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,195           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,195                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,196                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,196                 directory, all directories are treated like packages.
2025-06-08T10:05:34,197           ********************************************************************************

2025-06-08T10:05:34,198   !!
2025-06-08T10:05:34,198     check.warn(importable)
2025-06-08T10:05:34,199   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.sambamba' is absent from the `packages` configuration.
2025-06-08T10:05:34,200   !!

2025-06-08T10:05:34,201           ********************************************************************************
2025-06-08T10:05:34,201           ############################
2025-06-08T10:05:34,202           # Package would be ignored #
2025-06-08T10:05:34,202           ############################
2025-06-08T10:05:34,203           Python recognizes 'multiqc.modules.sambamba' as an importable package[^1],
2025-06-08T10:05:34,203           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,204           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,204           package, please make sure that 'multiqc.modules.sambamba' is explicitly added
2025-06-08T10:05:34,205           to the `packages` configuration field.

2025-06-08T10:05:34,206           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,206           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,207           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,207           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,208           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,209           If you don't want 'multiqc.modules.sambamba' to be distributed and are
2025-06-08T10:05:34,210           already explicitly excluding 'multiqc.modules.sambamba' via
2025-06-08T10:05:34,210           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,211           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,211           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,212           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,213           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,215           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,215                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,216                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,216                 directory, all directories are treated like packages.
2025-06-08T10:05:34,217           ********************************************************************************

2025-06-08T10:05:34,218   !!
2025-06-08T10:05:34,218     check.warn(importable)
2025-06-08T10:05:34,219   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.samblaster' is absent from the `packages` configuration.
2025-06-08T10:05:34,219   !!

2025-06-08T10:05:34,220           ********************************************************************************
2025-06-08T10:05:34,221           ############################
2025-06-08T10:05:34,221           # Package would be ignored #
2025-06-08T10:05:34,222           ############################
2025-06-08T10:05:34,222           Python recognizes 'multiqc.modules.samblaster' as an importable package[^1],
2025-06-08T10:05:34,223           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,224           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,224           package, please make sure that 'multiqc.modules.samblaster' is explicitly added
2025-06-08T10:05:34,225           to the `packages` configuration field.

2025-06-08T10:05:34,226           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,227           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,227           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,228           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,229           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,230           If you don't want 'multiqc.modules.samblaster' to be distributed and are
2025-06-08T10:05:34,230           already explicitly excluding 'multiqc.modules.samblaster' via
2025-06-08T10:05:34,231           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,231           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,232           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,233           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,233           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,235           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,235                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,236                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,236                 directory, all directories are treated like packages.
2025-06-08T10:05:34,237           ********************************************************************************

2025-06-08T10:05:34,238   !!
2025-06-08T10:05:34,238     check.warn(importable)
2025-06-08T10:05:34,238   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.samtools' is absent from the `packages` configuration.
2025-06-08T10:05:34,239   !!

2025-06-08T10:05:34,240           ********************************************************************************
2025-06-08T10:05:34,240           ############################
2025-06-08T10:05:34,241           # Package would be ignored #
2025-06-08T10:05:34,242           ############################
2025-06-08T10:05:34,242           Python recognizes 'multiqc.modules.samtools' as an importable package[^1],
2025-06-08T10:05:34,242           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,243           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,244           package, please make sure that 'multiqc.modules.samtools' is explicitly added
2025-06-08T10:05:34,244           to the `packages` configuration field.

2025-06-08T10:05:34,245           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,246           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,246           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,247           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,248           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,249           If you don't want 'multiqc.modules.samtools' to be distributed and are
2025-06-08T10:05:34,250           already explicitly excluding 'multiqc.modules.samtools' via
2025-06-08T10:05:34,250           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,251           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,251           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,252           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,253           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,255           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,256                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,257                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,257                 directory, all directories are treated like packages.
2025-06-08T10:05:34,258           ********************************************************************************

2025-06-08T10:05:34,259   !!
2025-06-08T10:05:34,259     check.warn(importable)
2025-06-08T10:05:34,259   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.samtools.tests' is absent from the `packages` configuration.
2025-06-08T10:05:34,260   !!

2025-06-08T10:05:34,261           ********************************************************************************
2025-06-08T10:05:34,261           ############################
2025-06-08T10:05:34,262           # Package would be ignored #
2025-06-08T10:05:34,262           ############################
2025-06-08T10:05:34,263           Python recognizes 'multiqc.modules.samtools.tests' as an importable package[^1],
2025-06-08T10:05:34,263           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,264           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,264           package, please make sure that 'multiqc.modules.samtools.tests' is explicitly added
2025-06-08T10:05:34,265           to the `packages` configuration field.

2025-06-08T10:05:34,266           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,266           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,267           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,268           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,269           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,270           If you don't want 'multiqc.modules.samtools.tests' to be distributed and are
2025-06-08T10:05:34,270           already explicitly excluding 'multiqc.modules.samtools.tests' via
2025-06-08T10:05:34,271           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,271           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,272           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,273           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,274           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,275           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,276                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,276                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,277                 directory, all directories are treated like packages.
2025-06-08T10:05:34,277           ********************************************************************************

2025-06-08T10:05:34,279   !!
2025-06-08T10:05:34,279     check.warn(importable)
2025-06-08T10:05:34,280   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.sargasso' is absent from the `packages` configuration.
2025-06-08T10:05:34,280   !!

2025-06-08T10:05:34,281           ********************************************************************************
2025-06-08T10:05:34,282           ############################
2025-06-08T10:05:34,282           # Package would be ignored #
2025-06-08T10:05:34,283           ############################
2025-06-08T10:05:34,283           Python recognizes 'multiqc.modules.sargasso' as an importable package[^1],
2025-06-08T10:05:34,284           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,285           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,285           package, please make sure that 'multiqc.modules.sargasso' is explicitly added
2025-06-08T10:05:34,286           to the `packages` configuration field.

2025-06-08T10:05:34,287           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,287           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,288           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,289           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,289           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,290           If you don't want 'multiqc.modules.sargasso' to be distributed and are
2025-06-08T10:05:34,291           already explicitly excluding 'multiqc.modules.sargasso' via
2025-06-08T10:05:34,291           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,292           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,292           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,293           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,294           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,295           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,296                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,296                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,297                 directory, all directories are treated like packages.
2025-06-08T10:05:34,297           ********************************************************************************

2025-06-08T10:05:34,298   !!
2025-06-08T10:05:34,299     check.warn(importable)
2025-06-08T10:05:34,299   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.seqera_cli' is absent from the `packages` configuration.
2025-06-08T10:05:34,300   !!

2025-06-08T10:05:34,301           ********************************************************************************
2025-06-08T10:05:34,301           ############################
2025-06-08T10:05:34,302           # Package would be ignored #
2025-06-08T10:05:34,302           ############################
2025-06-08T10:05:34,303           Python recognizes 'multiqc.modules.seqera_cli' as an importable package[^1],
2025-06-08T10:05:34,303           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,304           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,305           package, please make sure that 'multiqc.modules.seqera_cli' is explicitly added
2025-06-08T10:05:34,305           to the `packages` configuration field.

2025-06-08T10:05:34,306           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,307           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,307           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,308           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,309           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,310           If you don't want 'multiqc.modules.seqera_cli' to be distributed and are
2025-06-08T10:05:34,311           already explicitly excluding 'multiqc.modules.seqera_cli' via
2025-06-08T10:05:34,311           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,312           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,312           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,313           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,314           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,315           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,316                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,316                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,316                 directory, all directories are treated like packages.
2025-06-08T10:05:34,317           ********************************************************************************

2025-06-08T10:05:34,318   !!
2025-06-08T10:05:34,318     check.warn(importable)
2025-06-08T10:05:34,319   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.sequali' is absent from the `packages` configuration.
2025-06-08T10:05:34,319   !!

2025-06-08T10:05:34,320           ********************************************************************************
2025-06-08T10:05:34,321           ############################
2025-06-08T10:05:34,321           # Package would be ignored #
2025-06-08T10:05:34,322           ############################
2025-06-08T10:05:34,322           Python recognizes 'multiqc.modules.sequali' as an importable package[^1],
2025-06-08T10:05:34,322           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,323           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,324           package, please make sure that 'multiqc.modules.sequali' is explicitly added
2025-06-08T10:05:34,324           to the `packages` configuration field.

2025-06-08T10:05:34,325           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,326           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,326           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,327           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,329           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,330           If you don't want 'multiqc.modules.sequali' to be distributed and are
2025-06-08T10:05:34,330           already explicitly excluding 'multiqc.modules.sequali' via
2025-06-08T10:05:34,331           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,331           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,332           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,333           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,334           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,336           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,337                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,337                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,338                 directory, all directories are treated like packages.
2025-06-08T10:05:34,338           ********************************************************************************

2025-06-08T10:05:34,339   !!
2025-06-08T10:05:34,340     check.warn(importable)
2025-06-08T10:05:34,340   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.seqwho' is absent from the `packages` configuration.
2025-06-08T10:05:34,341   !!

2025-06-08T10:05:34,342           ********************************************************************************
2025-06-08T10:05:34,343           ############################
2025-06-08T10:05:34,343           # Package would be ignored #
2025-06-08T10:05:34,344           ############################
2025-06-08T10:05:34,344           Python recognizes 'multiqc.modules.seqwho' as an importable package[^1],
2025-06-08T10:05:34,344           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,345           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,346           package, please make sure that 'multiqc.modules.seqwho' is explicitly added
2025-06-08T10:05:34,346           to the `packages` configuration field.

2025-06-08T10:05:34,347           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,348           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,348           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,349           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,350           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,351           If you don't want 'multiqc.modules.seqwho' to be distributed and are
2025-06-08T10:05:34,352           already explicitly excluding 'multiqc.modules.seqwho' via
2025-06-08T10:05:34,352           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,352           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,353           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,354           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,355           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,356           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,357                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,357                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,358                 directory, all directories are treated like packages.
2025-06-08T10:05:34,359           ********************************************************************************

2025-06-08T10:05:34,360   !!
2025-06-08T10:05:34,360     check.warn(importable)
2025-06-08T10:05:34,361   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.seqyclean' is absent from the `packages` configuration.
2025-06-08T10:05:34,361   !!

2025-06-08T10:05:34,362           ********************************************************************************
2025-06-08T10:05:34,363           ############################
2025-06-08T10:05:34,363           # Package would be ignored #
2025-06-08T10:05:34,364           ############################
2025-06-08T10:05:34,364           Python recognizes 'multiqc.modules.seqyclean' as an importable package[^1],
2025-06-08T10:05:34,365           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,366           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,366           package, please make sure that 'multiqc.modules.seqyclean' is explicitly added
2025-06-08T10:05:34,367           to the `packages` configuration field.

2025-06-08T10:05:34,368           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,368           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,369           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,370           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,371           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,372           If you don't want 'multiqc.modules.seqyclean' to be distributed and are
2025-06-08T10:05:34,372           already explicitly excluding 'multiqc.modules.seqyclean' via
2025-06-08T10:05:34,373           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,373           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,374           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,374           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,375           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,377           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,377                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,377                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,378                 directory, all directories are treated like packages.
2025-06-08T10:05:34,378           ********************************************************************************

2025-06-08T10:05:34,379   !!
2025-06-08T10:05:34,380     check.warn(importable)
2025-06-08T10:05:34,380   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.sexdeterrmine' is absent from the `packages` configuration.
2025-06-08T10:05:34,381   !!

2025-06-08T10:05:34,382           ********************************************************************************
2025-06-08T10:05:34,382           ############################
2025-06-08T10:05:34,383           # Package would be ignored #
2025-06-08T10:05:34,383           ############################
2025-06-08T10:05:34,383           Python recognizes 'multiqc.modules.sexdeterrmine' as an importable package[^1],
2025-06-08T10:05:34,384           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,385           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,385           package, please make sure that 'multiqc.modules.sexdeterrmine' is explicitly added
2025-06-08T10:05:34,386           to the `packages` configuration field.

2025-06-08T10:05:34,387           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,387           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,388           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,389           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,390           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,391           If you don't want 'multiqc.modules.sexdeterrmine' to be distributed and are
2025-06-08T10:05:34,392           already explicitly excluding 'multiqc.modules.sexdeterrmine' via
2025-06-08T10:05:34,392           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,393           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,393           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,394           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,395           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,397           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,397                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,398                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,398                 directory, all directories are treated like packages.
2025-06-08T10:05:34,399           ********************************************************************************

2025-06-08T10:05:34,400   !!
2025-06-08T10:05:34,400     check.warn(importable)
2025-06-08T10:05:34,401   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.sickle' is absent from the `packages` configuration.
2025-06-08T10:05:34,401   !!

2025-06-08T10:05:34,402           ********************************************************************************
2025-06-08T10:05:34,402           ############################
2025-06-08T10:05:34,403           # Package would be ignored #
2025-06-08T10:05:34,403           ############################
2025-06-08T10:05:34,404           Python recognizes 'multiqc.modules.sickle' as an importable package[^1],
2025-06-08T10:05:34,404           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,405           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,406           package, please make sure that 'multiqc.modules.sickle' is explicitly added
2025-06-08T10:05:34,406           to the `packages` configuration field.

2025-06-08T10:05:34,407           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,407           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,408           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,409           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,409           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,410           If you don't want 'multiqc.modules.sickle' to be distributed and are
2025-06-08T10:05:34,411           already explicitly excluding 'multiqc.modules.sickle' via
2025-06-08T10:05:34,412           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,412           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,413           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,414           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,415           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,416           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,417                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,417                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,418                 directory, all directories are treated like packages.
2025-06-08T10:05:34,418           ********************************************************************************

2025-06-08T10:05:34,419   !!
2025-06-08T10:05:34,420     check.warn(importable)
2025-06-08T10:05:34,420   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.skewer' is absent from the `packages` configuration.
2025-06-08T10:05:34,421   !!

2025-06-08T10:05:34,422           ********************************************************************************
2025-06-08T10:05:34,422           ############################
2025-06-08T10:05:34,423           # Package would be ignored #
2025-06-08T10:05:34,423           ############################
2025-06-08T10:05:34,424           Python recognizes 'multiqc.modules.skewer' as an importable package[^1],
2025-06-08T10:05:34,424           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,425           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,426           package, please make sure that 'multiqc.modules.skewer' is explicitly added
2025-06-08T10:05:34,426           to the `packages` configuration field.

2025-06-08T10:05:34,427           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,428           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,428           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,429           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,430           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,430           If you don't want 'multiqc.modules.skewer' to be distributed and are
2025-06-08T10:05:34,431           already explicitly excluding 'multiqc.modules.skewer' via
2025-06-08T10:05:34,431           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,432           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,432           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,433           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,434           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,435           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,435                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,436                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,436                 directory, all directories are treated like packages.
2025-06-08T10:05:34,437           ********************************************************************************

2025-06-08T10:05:34,438   !!
2025-06-08T10:05:34,438     check.warn(importable)
2025-06-08T10:05:34,439   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.slamdunk' is absent from the `packages` configuration.
2025-06-08T10:05:34,439   !!

2025-06-08T10:05:34,440           ********************************************************************************
2025-06-08T10:05:34,440           ############################
2025-06-08T10:05:34,441           # Package would be ignored #
2025-06-08T10:05:34,441           ############################
2025-06-08T10:05:34,442           Python recognizes 'multiqc.modules.slamdunk' as an importable package[^1],
2025-06-08T10:05:34,442           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,443           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,444           package, please make sure that 'multiqc.modules.slamdunk' is explicitly added
2025-06-08T10:05:34,444           to the `packages` configuration field.

2025-06-08T10:05:34,445           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,446           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,446           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,447           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,448           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,449           If you don't want 'multiqc.modules.slamdunk' to be distributed and are
2025-06-08T10:05:34,450           already explicitly excluding 'multiqc.modules.slamdunk' via
2025-06-08T10:05:34,450           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,451           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,451           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,452           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,453           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,455           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,455                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,456                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,456                 directory, all directories are treated like packages.
2025-06-08T10:05:34,456           ********************************************************************************

2025-06-08T10:05:34,457   !!
2025-06-08T10:05:34,458     check.warn(importable)
2025-06-08T10:05:34,458   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.snippy' is absent from the `packages` configuration.
2025-06-08T10:05:34,459   !!

2025-06-08T10:05:34,460           ********************************************************************************
2025-06-08T10:05:34,460           ############################
2025-06-08T10:05:34,460           # Package would be ignored #
2025-06-08T10:05:34,461           ############################
2025-06-08T10:05:34,461           Python recognizes 'multiqc.modules.snippy' as an importable package[^1],
2025-06-08T10:05:34,462           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,463           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,463           package, please make sure that 'multiqc.modules.snippy' is explicitly added
2025-06-08T10:05:34,464           to the `packages` configuration field.

2025-06-08T10:05:34,465           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,465           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,466           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,467           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,468           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,469           If you don't want 'multiqc.modules.snippy' to be distributed and are
2025-06-08T10:05:34,469           already explicitly excluding 'multiqc.modules.snippy' via
2025-06-08T10:05:34,470           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,470           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,471           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,472           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,473           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,474           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,475                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,475                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,476                 directory, all directories are treated like packages.
2025-06-08T10:05:34,476           ********************************************************************************

2025-06-08T10:05:34,477   !!
2025-06-08T10:05:34,478     check.warn(importable)
2025-06-08T10:05:34,478   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.snpeff' is absent from the `packages` configuration.
2025-06-08T10:05:34,479   !!

2025-06-08T10:05:34,480           ********************************************************************************
2025-06-08T10:05:34,480           ############################
2025-06-08T10:05:34,481           # Package would be ignored #
2025-06-08T10:05:34,481           ############################
2025-06-08T10:05:34,482           Python recognizes 'multiqc.modules.snpeff' as an importable package[^1],
2025-06-08T10:05:34,482           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,483           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,484           package, please make sure that 'multiqc.modules.snpeff' is explicitly added
2025-06-08T10:05:34,484           to the `packages` configuration field.

2025-06-08T10:05:34,485           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,485           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,486           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,486           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,487           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,488           If you don't want 'multiqc.modules.snpeff' to be distributed and are
2025-06-08T10:05:34,489           already explicitly excluding 'multiqc.modules.snpeff' via
2025-06-08T10:05:34,489           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,490           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,490           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,491           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,492           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,493           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,494                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,494                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,495                 directory, all directories are treated like packages.
2025-06-08T10:05:34,495           ********************************************************************************

2025-06-08T10:05:34,496   !!
2025-06-08T10:05:34,497     check.warn(importable)
2025-06-08T10:05:34,497   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.snpsplit' is absent from the `packages` configuration.
2025-06-08T10:05:34,497   !!

2025-06-08T10:05:34,498           ********************************************************************************
2025-06-08T10:05:34,499           ############################
2025-06-08T10:05:34,499           # Package would be ignored #
2025-06-08T10:05:34,500           ############################
2025-06-08T10:05:34,500           Python recognizes 'multiqc.modules.snpsplit' as an importable package[^1],
2025-06-08T10:05:34,501           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,502           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,502           package, please make sure that 'multiqc.modules.snpsplit' is explicitly added
2025-06-08T10:05:34,503           to the `packages` configuration field.

2025-06-08T10:05:34,503           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,504           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,504           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,505           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,506           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,507           If you don't want 'multiqc.modules.snpsplit' to be distributed and are
2025-06-08T10:05:34,508           already explicitly excluding 'multiqc.modules.snpsplit' via
2025-06-08T10:05:34,509           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,509           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,510           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,511           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,511           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,513           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,513                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,513                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,514                 directory, all directories are treated like packages.
2025-06-08T10:05:34,514           ********************************************************************************

2025-06-08T10:05:34,515   !!
2025-06-08T10:05:34,515     check.warn(importable)
2025-06-08T10:05:34,516   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.somalier' is absent from the `packages` configuration.
2025-06-08T10:05:34,516   !!

2025-06-08T10:05:34,517           ********************************************************************************
2025-06-08T10:05:34,518           ############################
2025-06-08T10:05:34,518           # Package would be ignored #
2025-06-08T10:05:34,519           ############################
2025-06-08T10:05:34,519           Python recognizes 'multiqc.modules.somalier' as an importable package[^1],
2025-06-08T10:05:34,519           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,520           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,521           package, please make sure that 'multiqc.modules.somalier' is explicitly added
2025-06-08T10:05:34,521           to the `packages` configuration field.

2025-06-08T10:05:34,522           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,523           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,523           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,524           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,525           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,526           If you don't want 'multiqc.modules.somalier' to be distributed and are
2025-06-08T10:05:34,527           already explicitly excluding 'multiqc.modules.somalier' via
2025-06-08T10:05:34,527           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,528           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,528           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,529           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,530           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,532           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,532                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,533                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,533                 directory, all directories are treated like packages.
2025-06-08T10:05:34,534           ********************************************************************************

2025-06-08T10:05:34,535   !!
2025-06-08T10:05:34,535     check.warn(importable)
2025-06-08T10:05:34,536   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.sortmerna' is absent from the `packages` configuration.
2025-06-08T10:05:34,536   !!

2025-06-08T10:05:34,537           ********************************************************************************
2025-06-08T10:05:34,538           ############################
2025-06-08T10:05:34,538           # Package would be ignored #
2025-06-08T10:05:34,539           ############################
2025-06-08T10:05:34,539           Python recognizes 'multiqc.modules.sortmerna' as an importable package[^1],
2025-06-08T10:05:34,540           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,541           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,541           package, please make sure that 'multiqc.modules.sortmerna' is explicitly added
2025-06-08T10:05:34,542           to the `packages` configuration field.

2025-06-08T10:05:34,542           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,543           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,543           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,544           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,545           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,546           If you don't want 'multiqc.modules.sortmerna' to be distributed and are
2025-06-08T10:05:34,547           already explicitly excluding 'multiqc.modules.sortmerna' via
2025-06-08T10:05:34,547           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,548           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,548           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,549           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,550           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,551           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,552                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,552                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,553                 directory, all directories are treated like packages.
2025-06-08T10:05:34,553           ********************************************************************************

2025-06-08T10:05:34,554   !!
2025-06-08T10:05:34,555     check.warn(importable)
2025-06-08T10:05:34,555   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.sourmash' is absent from the `packages` configuration.
2025-06-08T10:05:34,556   !!

2025-06-08T10:05:34,557           ********************************************************************************
2025-06-08T10:05:34,557           ############################
2025-06-08T10:05:34,558           # Package would be ignored #
2025-06-08T10:05:34,558           ############################
2025-06-08T10:05:34,559           Python recognizes 'multiqc.modules.sourmash' as an importable package[^1],
2025-06-08T10:05:34,559           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,560           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,561           package, please make sure that 'multiqc.modules.sourmash' is explicitly added
2025-06-08T10:05:34,561           to the `packages` configuration field.

2025-06-08T10:05:34,562           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,563           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,563           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,565           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,566           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,566           If you don't want 'multiqc.modules.sourmash' to be distributed and are
2025-06-08T10:05:34,567           already explicitly excluding 'multiqc.modules.sourmash' via
2025-06-08T10:05:34,567           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,568           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,568           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,569           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,570           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,571           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,572                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,572                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,572                 directory, all directories are treated like packages.
2025-06-08T10:05:34,573           ********************************************************************************

2025-06-08T10:05:34,574   !!
2025-06-08T10:05:34,574     check.warn(importable)
2025-06-08T10:05:34,575   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.spaceranger' is absent from the `packages` configuration.
2025-06-08T10:05:34,575   !!

2025-06-08T10:05:34,576           ********************************************************************************
2025-06-08T10:05:34,577           ############################
2025-06-08T10:05:34,577           # Package would be ignored #
2025-06-08T10:05:34,578           ############################
2025-06-08T10:05:34,578           Python recognizes 'multiqc.modules.spaceranger' as an importable package[^1],
2025-06-08T10:05:34,579           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,580           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,580           package, please make sure that 'multiqc.modules.spaceranger' is explicitly added
2025-06-08T10:05:34,581           to the `packages` configuration field.

2025-06-08T10:05:34,582           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,582           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,583           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,584           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,585           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,586           If you don't want 'multiqc.modules.spaceranger' to be distributed and are
2025-06-08T10:05:34,586           already explicitly excluding 'multiqc.modules.spaceranger' via
2025-06-08T10:05:34,587           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,587           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,588           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,589           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,590           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,591           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,592                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,592                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,593                 directory, all directories are treated like packages.
2025-06-08T10:05:34,594           ********************************************************************************

2025-06-08T10:05:34,594   !!
2025-06-08T10:05:34,595     check.warn(importable)
2025-06-08T10:05:34,595   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.stacks' is absent from the `packages` configuration.
2025-06-08T10:05:34,596   !!

2025-06-08T10:05:34,597           ********************************************************************************
2025-06-08T10:05:34,597           ############################
2025-06-08T10:05:34,597           # Package would be ignored #
2025-06-08T10:05:34,598           ############################
2025-06-08T10:05:34,598           Python recognizes 'multiqc.modules.stacks' as an importable package[^1],
2025-06-08T10:05:34,599           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,600           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,600           package, please make sure that 'multiqc.modules.stacks' is explicitly added
2025-06-08T10:05:34,601           to the `packages` configuration field.

2025-06-08T10:05:34,602           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,602           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,602           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,603           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,604           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,605           If you don't want 'multiqc.modules.stacks' to be distributed and are
2025-06-08T10:05:34,606           already explicitly excluding 'multiqc.modules.stacks' via
2025-06-08T10:05:34,607           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,607           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,608           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,609           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,610           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,611           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,612                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,612                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,613                 directory, all directories are treated like packages.
2025-06-08T10:05:34,613           ********************************************************************************

2025-06-08T10:05:34,614   !!
2025-06-08T10:05:34,615     check.warn(importable)
2025-06-08T10:05:34,615   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.star' is absent from the `packages` configuration.
2025-06-08T10:05:34,616   !!

2025-06-08T10:05:34,617           ********************************************************************************
2025-06-08T10:05:34,617           ############################
2025-06-08T10:05:34,618           # Package would be ignored #
2025-06-08T10:05:34,619           ############################
2025-06-08T10:05:34,619           Python recognizes 'multiqc.modules.star' as an importable package[^1],
2025-06-08T10:05:34,620           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,621           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,622           package, please make sure that 'multiqc.modules.star' is explicitly added
2025-06-08T10:05:34,622           to the `packages` configuration field.

2025-06-08T10:05:34,623           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,624           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,624           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,625           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,627           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,628           If you don't want 'multiqc.modules.star' to be distributed and are
2025-06-08T10:05:34,628           already explicitly excluding 'multiqc.modules.star' via
2025-06-08T10:05:34,629           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,629           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,630           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,631           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,631           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,633           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,633                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,634                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,634                 directory, all directories are treated like packages.
2025-06-08T10:05:34,635           ********************************************************************************

2025-06-08T10:05:34,636   !!
2025-06-08T10:05:34,636     check.warn(importable)
2025-06-08T10:05:34,636   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.supernova' is absent from the `packages` configuration.
2025-06-08T10:05:34,637   !!

2025-06-08T10:05:34,638           ********************************************************************************
2025-06-08T10:05:34,638           ############################
2025-06-08T10:05:34,639           # Package would be ignored #
2025-06-08T10:05:34,639           ############################
2025-06-08T10:05:34,640           Python recognizes 'multiqc.modules.supernova' as an importable package[^1],
2025-06-08T10:05:34,640           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,641           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,642           package, please make sure that 'multiqc.modules.supernova' is explicitly added
2025-06-08T10:05:34,642           to the `packages` configuration field.

2025-06-08T10:05:34,644           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,644           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,645           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,646           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,647           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,648           If you don't want 'multiqc.modules.supernova' to be distributed and are
2025-06-08T10:05:34,648           already explicitly excluding 'multiqc.modules.supernova' via
2025-06-08T10:05:34,649           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,649           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,650           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,651           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,652           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,653           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,653                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,654                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,654                 directory, all directories are treated like packages.
2025-06-08T10:05:34,654           ********************************************************************************

2025-06-08T10:05:34,655   !!
2025-06-08T10:05:34,656     check.warn(importable)
2025-06-08T10:05:34,656   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.telseq' is absent from the `packages` configuration.
2025-06-08T10:05:34,656   !!

2025-06-08T10:05:34,657           ********************************************************************************
2025-06-08T10:05:34,658           ############################
2025-06-08T10:05:34,658           # Package would be ignored #
2025-06-08T10:05:34,659           ############################
2025-06-08T10:05:34,659           Python recognizes 'multiqc.modules.telseq' as an importable package[^1],
2025-06-08T10:05:34,660           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,661           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,661           package, please make sure that 'multiqc.modules.telseq' is explicitly added
2025-06-08T10:05:34,662           to the `packages` configuration field.

2025-06-08T10:05:34,663           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,663           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,664           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,665           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,666           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,667           If you don't want 'multiqc.modules.telseq' to be distributed and are
2025-06-08T10:05:34,668           already explicitly excluding 'multiqc.modules.telseq' via
2025-06-08T10:05:34,668           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,669           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,670           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,671           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,672           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,673           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,674                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,674                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,675                 directory, all directories are treated like packages.
2025-06-08T10:05:34,675           ********************************************************************************

2025-06-08T10:05:34,676   !!
2025-06-08T10:05:34,677     check.warn(importable)
2025-06-08T10:05:34,677   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.theta2' is absent from the `packages` configuration.
2025-06-08T10:05:34,678   !!

2025-06-08T10:05:34,679           ********************************************************************************
2025-06-08T10:05:34,679           ############################
2025-06-08T10:05:34,680           # Package would be ignored #
2025-06-08T10:05:34,680           ############################
2025-06-08T10:05:34,681           Python recognizes 'multiqc.modules.theta2' as an importable package[^1],
2025-06-08T10:05:34,681           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,682           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,682           package, please make sure that 'multiqc.modules.theta2' is explicitly added
2025-06-08T10:05:34,683           to the `packages` configuration field.

2025-06-08T10:05:34,684           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,684           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,685           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,685           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,686           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,687           If you don't want 'multiqc.modules.theta2' to be distributed and are
2025-06-08T10:05:34,688           already explicitly excluding 'multiqc.modules.theta2' via
2025-06-08T10:05:34,688           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,689           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,689           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,690           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,691           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,692           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,693                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,693                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,694                 directory, all directories are treated like packages.
2025-06-08T10:05:34,694           ********************************************************************************

2025-06-08T10:05:34,695   !!
2025-06-08T10:05:34,696     check.warn(importable)
2025-06-08T10:05:34,696   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.tophat' is absent from the `packages` configuration.
2025-06-08T10:05:34,697   !!

2025-06-08T10:05:34,698           ********************************************************************************
2025-06-08T10:05:34,698           ############################
2025-06-08T10:05:34,699           # Package would be ignored #
2025-06-08T10:05:34,699           ############################
2025-06-08T10:05:34,700           Python recognizes 'multiqc.modules.tophat' as an importable package[^1],
2025-06-08T10:05:34,700           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,701           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,702           package, please make sure that 'multiqc.modules.tophat' is explicitly added
2025-06-08T10:05:34,703           to the `packages` configuration field.

2025-06-08T10:05:34,704           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,704           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,705           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,706           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,707           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,708           If you don't want 'multiqc.modules.tophat' to be distributed and are
2025-06-08T10:05:34,709           already explicitly excluding 'multiqc.modules.tophat' via
2025-06-08T10:05:34,710           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,710           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,711           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,712           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,713           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,715           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,715                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,716                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,716                 directory, all directories are treated like packages.
2025-06-08T10:05:34,716           ********************************************************************************

2025-06-08T10:05:34,717   !!
2025-06-08T10:05:34,718     check.warn(importable)
2025-06-08T10:05:34,718   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.trimmomatic' is absent from the `packages` configuration.
2025-06-08T10:05:34,719   !!

2025-06-08T10:05:34,719           ********************************************************************************
2025-06-08T10:05:34,720           ############################
2025-06-08T10:05:34,720           # Package would be ignored #
2025-06-08T10:05:34,721           ############################
2025-06-08T10:05:34,721           Python recognizes 'multiqc.modules.trimmomatic' as an importable package[^1],
2025-06-08T10:05:34,722           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,723           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,724           package, please make sure that 'multiqc.modules.trimmomatic' is explicitly added
2025-06-08T10:05:34,724           to the `packages` configuration field.

2025-06-08T10:05:34,725           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,726           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,726           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,727           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,728           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,729           If you don't want 'multiqc.modules.trimmomatic' to be distributed and are
2025-06-08T10:05:34,730           already explicitly excluding 'multiqc.modules.trimmomatic' via
2025-06-08T10:05:34,730           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,730           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,731           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,732           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,733           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,735           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,735                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,736                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,736                 directory, all directories are treated like packages.
2025-06-08T10:05:34,737           ********************************************************************************

2025-06-08T10:05:34,738   !!
2025-06-08T10:05:34,738     check.warn(importable)
2025-06-08T10:05:34,738   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.truvari' is absent from the `packages` configuration.
2025-06-08T10:05:34,739   !!

2025-06-08T10:05:34,740           ********************************************************************************
2025-06-08T10:05:34,740           ############################
2025-06-08T10:05:34,740           # Package would be ignored #
2025-06-08T10:05:34,741           ############################
2025-06-08T10:05:34,741           Python recognizes 'multiqc.modules.truvari' as an importable package[^1],
2025-06-08T10:05:34,742           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,742           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,743           package, please make sure that 'multiqc.modules.truvari' is explicitly added
2025-06-08T10:05:34,743           to the `packages` configuration field.

2025-06-08T10:05:34,744           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,744           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,745           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,746           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,747           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,747           If you don't want 'multiqc.modules.truvari' to be distributed and are
2025-06-08T10:05:34,748           already explicitly excluding 'multiqc.modules.truvari' via
2025-06-08T10:05:34,748           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,749           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,749           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,750           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,751           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,753           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,753                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,754                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,754                 directory, all directories are treated like packages.
2025-06-08T10:05:34,755           ********************************************************************************

2025-06-08T10:05:34,756   !!
2025-06-08T10:05:34,756     check.warn(importable)
2025-06-08T10:05:34,757   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.umicollapse' is absent from the `packages` configuration.
2025-06-08T10:05:34,757   !!

2025-06-08T10:05:34,758           ********************************************************************************
2025-06-08T10:05:34,759           ############################
2025-06-08T10:05:34,759           # Package would be ignored #
2025-06-08T10:05:34,760           ############################
2025-06-08T10:05:34,760           Python recognizes 'multiqc.modules.umicollapse' as an importable package[^1],
2025-06-08T10:05:34,761           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,762           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,762           package, please make sure that 'multiqc.modules.umicollapse' is explicitly added
2025-06-08T10:05:34,763           to the `packages` configuration field.

2025-06-08T10:05:34,764           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,764           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,765           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,766           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,766           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,767           If you don't want 'multiqc.modules.umicollapse' to be distributed and are
2025-06-08T10:05:34,768           already explicitly excluding 'multiqc.modules.umicollapse' via
2025-06-08T10:05:34,768           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,769           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,769           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,770           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,771           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,772           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,773                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,773                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,773                 directory, all directories are treated like packages.
2025-06-08T10:05:34,774           ********************************************************************************

2025-06-08T10:05:34,775   !!
2025-06-08T10:05:34,775     check.warn(importable)
2025-06-08T10:05:34,776   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.umicollapse.tests' is absent from the `packages` configuration.
2025-06-08T10:05:34,776   !!

2025-06-08T10:05:34,777           ********************************************************************************
2025-06-08T10:05:34,778           ############################
2025-06-08T10:05:34,778           # Package would be ignored #
2025-06-08T10:05:34,779           ############################
2025-06-08T10:05:34,779           Python recognizes 'multiqc.modules.umicollapse.tests' as an importable package[^1],
2025-06-08T10:05:34,780           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,781           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,781           package, please make sure that 'multiqc.modules.umicollapse.tests' is explicitly added
2025-06-08T10:05:34,782           to the `packages` configuration field.

2025-06-08T10:05:34,783           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,783           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,784           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,785           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,786           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,787           If you don't want 'multiqc.modules.umicollapse.tests' to be distributed and are
2025-06-08T10:05:34,788           already explicitly excluding 'multiqc.modules.umicollapse.tests' via
2025-06-08T10:05:34,788           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,789           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,789           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,790           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,791           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,793           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,793                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,794                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,794                 directory, all directories are treated like packages.
2025-06-08T10:05:34,795           ********************************************************************************

2025-06-08T10:05:34,796   !!
2025-06-08T10:05:34,796     check.warn(importable)
2025-06-08T10:05:34,796   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.umitools' is absent from the `packages` configuration.
2025-06-08T10:05:34,797   !!

2025-06-08T10:05:34,798           ********************************************************************************
2025-06-08T10:05:34,799           ############################
2025-06-08T10:05:34,799           # Package would be ignored #
2025-06-08T10:05:34,800           ############################
2025-06-08T10:05:34,800           Python recognizes 'multiqc.modules.umitools' as an importable package[^1],
2025-06-08T10:05:34,801           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,802           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,802           package, please make sure that 'multiqc.modules.umitools' is explicitly added
2025-06-08T10:05:34,803           to the `packages` configuration field.

2025-06-08T10:05:34,803           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,804           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,804           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,805           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,806           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,807           If you don't want 'multiqc.modules.umitools' to be distributed and are
2025-06-08T10:05:34,808           already explicitly excluding 'multiqc.modules.umitools' via
2025-06-08T10:05:34,808           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,809           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,809           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,810           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,811           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,813           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,813                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,814                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,814                 directory, all directories are treated like packages.
2025-06-08T10:05:34,815           ********************************************************************************

2025-06-08T10:05:34,816   !!
2025-06-08T10:05:34,816     check.warn(importable)
2025-06-08T10:05:34,817   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.umitools.tests' is absent from the `packages` configuration.
2025-06-08T10:05:34,817   !!

2025-06-08T10:05:34,818           ********************************************************************************
2025-06-08T10:05:34,819           ############################
2025-06-08T10:05:34,819           # Package would be ignored #
2025-06-08T10:05:34,820           ############################
2025-06-08T10:05:34,820           Python recognizes 'multiqc.modules.umitools.tests' as an importable package[^1],
2025-06-08T10:05:34,821           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,822           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,822           package, please make sure that 'multiqc.modules.umitools.tests' is explicitly added
2025-06-08T10:05:34,823           to the `packages` configuration field.

2025-06-08T10:05:34,823           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,824           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,824           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,825           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,826           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,827           If you don't want 'multiqc.modules.umitools.tests' to be distributed and are
2025-06-08T10:05:34,827           already explicitly excluding 'multiqc.modules.umitools.tests' via
2025-06-08T10:05:34,827           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,828           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,828           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,829           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,830           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,831           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,832                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,832                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,833                 directory, all directories are treated like packages.
2025-06-08T10:05:34,833           ********************************************************************************

2025-06-08T10:05:34,834   !!
2025-06-08T10:05:34,835     check.warn(importable)
2025-06-08T10:05:34,835   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.varscan2' is absent from the `packages` configuration.
2025-06-08T10:05:34,835   !!

2025-06-08T10:05:34,836           ********************************************************************************
2025-06-08T10:05:34,837           ############################
2025-06-08T10:05:34,837           # Package would be ignored #
2025-06-08T10:05:34,838           ############################
2025-06-08T10:05:34,838           Python recognizes 'multiqc.modules.varscan2' as an importable package[^1],
2025-06-08T10:05:34,839           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,840           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,840           package, please make sure that 'multiqc.modules.varscan2' is explicitly added
2025-06-08T10:05:34,841           to the `packages` configuration field.

2025-06-08T10:05:34,842           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,842           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,843           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,844           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,845           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,846           If you don't want 'multiqc.modules.varscan2' to be distributed and are
2025-06-08T10:05:34,846           already explicitly excluding 'multiqc.modules.varscan2' via
2025-06-08T10:05:34,847           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,847           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,848           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,849           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,850           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,851           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,851                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,852                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,852                 directory, all directories are treated like packages.
2025-06-08T10:05:34,853           ********************************************************************************

2025-06-08T10:05:34,854   !!
2025-06-08T10:05:34,854     check.warn(importable)
2025-06-08T10:05:34,855   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.vcftools' is absent from the `packages` configuration.
2025-06-08T10:05:34,855   !!

2025-06-08T10:05:34,856           ********************************************************************************
2025-06-08T10:05:34,857           ############################
2025-06-08T10:05:34,857           # Package would be ignored #
2025-06-08T10:05:34,858           ############################
2025-06-08T10:05:34,858           Python recognizes 'multiqc.modules.vcftools' as an importable package[^1],
2025-06-08T10:05:34,859           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,860           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,860           package, please make sure that 'multiqc.modules.vcftools' is explicitly added
2025-06-08T10:05:34,861           to the `packages` configuration field.

2025-06-08T10:05:34,862           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,862           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,863           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,864           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,865           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,866           If you don't want 'multiqc.modules.vcftools' to be distributed and are
2025-06-08T10:05:34,867           already explicitly excluding 'multiqc.modules.vcftools' via
2025-06-08T10:05:34,867           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,868           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,868           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,869           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,870           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,872           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,872                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,873                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,873                 directory, all directories are treated like packages.
2025-06-08T10:05:34,874           ********************************************************************************

2025-06-08T10:05:34,875   !!
2025-06-08T10:05:34,876     check.warn(importable)
2025-06-08T10:05:34,876   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.vep' is absent from the `packages` configuration.
2025-06-08T10:05:34,877   !!

2025-06-08T10:05:34,878           ********************************************************************************
2025-06-08T10:05:34,879           ############################
2025-06-08T10:05:34,879           # Package would be ignored #
2025-06-08T10:05:34,879           ############################
2025-06-08T10:05:34,880           Python recognizes 'multiqc.modules.vep' as an importable package[^1],
2025-06-08T10:05:34,880           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,881           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,881           package, please make sure that 'multiqc.modules.vep' is explicitly added
2025-06-08T10:05:34,882           to the `packages` configuration field.

2025-06-08T10:05:34,883           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,883           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,884           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,885           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,885           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,886           If you don't want 'multiqc.modules.vep' to be distributed and are
2025-06-08T10:05:34,887           already explicitly excluding 'multiqc.modules.vep' via
2025-06-08T10:05:34,887           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,888           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,888           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,889           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,890           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,892           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,892                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,893                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,893                 directory, all directories are treated like packages.
2025-06-08T10:05:34,893           ********************************************************************************

2025-06-08T10:05:34,894   !!
2025-06-08T10:05:34,895     check.warn(importable)
2025-06-08T10:05:34,895   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.verifybamid' is absent from the `packages` configuration.
2025-06-08T10:05:34,896   !!

2025-06-08T10:05:34,897           ********************************************************************************
2025-06-08T10:05:34,897           ############################
2025-06-08T10:05:34,898           # Package would be ignored #
2025-06-08T10:05:34,898           ############################
2025-06-08T10:05:34,899           Python recognizes 'multiqc.modules.verifybamid' as an importable package[^1],
2025-06-08T10:05:34,899           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,900           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,901           package, please make sure that 'multiqc.modules.verifybamid' is explicitly added
2025-06-08T10:05:34,901           to the `packages` configuration field.

2025-06-08T10:05:34,902           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,903           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,903           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,905           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,905           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,906           If you don't want 'multiqc.modules.verifybamid' to be distributed and are
2025-06-08T10:05:34,907           already explicitly excluding 'multiqc.modules.verifybamid' via
2025-06-08T10:05:34,907           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,907           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,908           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,909           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,909           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,911           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,911                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,911                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,912                 directory, all directories are treated like packages.
2025-06-08T10:05:34,912           ********************************************************************************

2025-06-08T10:05:34,913   !!
2025-06-08T10:05:34,914     check.warn(importable)
2025-06-08T10:05:34,914   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.vg' is absent from the `packages` configuration.
2025-06-08T10:05:34,915   !!

2025-06-08T10:05:34,915           ********************************************************************************
2025-06-08T10:05:34,916           ############################
2025-06-08T10:05:34,916           # Package would be ignored #
2025-06-08T10:05:34,917           ############################
2025-06-08T10:05:34,917           Python recognizes 'multiqc.modules.vg' as an importable package[^1],
2025-06-08T10:05:34,918           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,919           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,919           package, please make sure that 'multiqc.modules.vg' is explicitly added
2025-06-08T10:05:34,920           to the `packages` configuration field.

2025-06-08T10:05:34,920           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,921           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,921           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,922           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,923           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,924           If you don't want 'multiqc.modules.vg' to be distributed and are
2025-06-08T10:05:34,925           already explicitly excluding 'multiqc.modules.vg' via
2025-06-08T10:05:34,925           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,926           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,926           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,927           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,928           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,929           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,930                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,930                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,931                 directory, all directories are treated like packages.
2025-06-08T10:05:34,931           ********************************************************************************

2025-06-08T10:05:34,932   !!
2025-06-08T10:05:34,933     check.warn(importable)
2025-06-08T10:05:34,933   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.whatshap' is absent from the `packages` configuration.
2025-06-08T10:05:34,933   !!

2025-06-08T10:05:34,934           ********************************************************************************
2025-06-08T10:05:34,934           ############################
2025-06-08T10:05:34,935           # Package would be ignored #
2025-06-08T10:05:34,935           ############################
2025-06-08T10:05:34,936           Python recognizes 'multiqc.modules.whatshap' as an importable package[^1],
2025-06-08T10:05:34,936           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,937           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,937           package, please make sure that 'multiqc.modules.whatshap' is explicitly added
2025-06-08T10:05:34,938           to the `packages` configuration field.

2025-06-08T10:05:34,938           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,939           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,939           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,940           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,941           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,942           If you don't want 'multiqc.modules.whatshap' to be distributed and are
2025-06-08T10:05:34,942           already explicitly excluding 'multiqc.modules.whatshap' via
2025-06-08T10:05:34,943           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,943           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,944           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,945           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,945           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,947           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,947                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,948                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,949                 directory, all directories are treated like packages.
2025-06-08T10:05:34,949           ********************************************************************************

2025-06-08T10:05:34,950   !!
2025-06-08T10:05:34,951     check.warn(importable)
2025-06-08T10:05:34,952   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.xengsort' is absent from the `packages` configuration.
2025-06-08T10:05:34,952   !!

2025-06-08T10:05:34,953           ********************************************************************************
2025-06-08T10:05:34,954           ############################
2025-06-08T10:05:34,954           # Package would be ignored #
2025-06-08T10:05:34,955           ############################
2025-06-08T10:05:34,955           Python recognizes 'multiqc.modules.xengsort' as an importable package[^1],
2025-06-08T10:05:34,956           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,957           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,957           package, please make sure that 'multiqc.modules.xengsort' is explicitly added
2025-06-08T10:05:34,958           to the `packages` configuration field.

2025-06-08T10:05:34,959           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,959           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,960           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,961           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,962           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,963           If you don't want 'multiqc.modules.xengsort' to be distributed and are
2025-06-08T10:05:34,963           already explicitly excluding 'multiqc.modules.xengsort' via
2025-06-08T10:05:34,964           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,964           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,964           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,965           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,967           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,968           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,969                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,969                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,970                 directory, all directories are treated like packages.
2025-06-08T10:05:34,970           ********************************************************************************

2025-06-08T10:05:34,971   !!
2025-06-08T10:05:34,971     check.warn(importable)
2025-06-08T10:05:34,972   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.modules.xenome' is absent from the `packages` configuration.
2025-06-08T10:05:34,973   !!

2025-06-08T10:05:34,974           ********************************************************************************
2025-06-08T10:05:34,974           ############################
2025-06-08T10:05:34,975           # Package would be ignored #
2025-06-08T10:05:34,975           ############################
2025-06-08T10:05:34,976           Python recognizes 'multiqc.modules.xenome' as an importable package[^1],
2025-06-08T10:05:34,976           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:34,977           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:34,978           package, please make sure that 'multiqc.modules.xenome' is explicitly added
2025-06-08T10:05:34,978           to the `packages` configuration field.

2025-06-08T10:05:34,979           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:34,980           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:34,980           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:34,981           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:34,983           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:34,984           If you don't want 'multiqc.modules.xenome' to be distributed and are
2025-06-08T10:05:34,985           already explicitly excluding 'multiqc.modules.xenome' via
2025-06-08T10:05:34,985           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:34,986           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:34,986           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:34,988           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:34,990           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:34,991           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:34,992                 even if it does not contain any `.py` files.
2025-06-08T10:05:34,992                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:34,993                 directory, all directories are treated like packages.
2025-06-08T10:05:34,994           ********************************************************************************

2025-06-08T10:05:34,995   !!
2025-06-08T10:05:34,995     check.warn(importable)
2025-06-08T10:05:34,996   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.plots' is absent from the `packages` configuration.
2025-06-08T10:05:34,997   !!

2025-06-08T10:05:34,998           ********************************************************************************
2025-06-08T10:05:34,999           ############################
2025-06-08T10:05:34,999           # Package would be ignored #
2025-06-08T10:05:35,000           ############################
2025-06-08T10:05:35,000           Python recognizes 'multiqc.plots' as an importable package[^1],
2025-06-08T10:05:35,001           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,002           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,003           package, please make sure that 'multiqc.plots' is explicitly added
2025-06-08T10:05:35,003           to the `packages` configuration field.

2025-06-08T10:05:35,004           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,005           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,006           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,007           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,008           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,010           If you don't want 'multiqc.plots' to be distributed and are
2025-06-08T10:05:35,010           already explicitly excluding 'multiqc.plots' via
2025-06-08T10:05:35,011           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,012           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,012           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,014           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,015           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,017           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,018                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,018                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,019                 directory, all directories are treated like packages.
2025-06-08T10:05:35,019           ********************************************************************************

2025-06-08T10:05:35,021   !!
2025-06-08T10:05:35,021     check.warn(importable)
2025-06-08T10:05:35,022   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates' is absent from the `packages` configuration.
2025-06-08T10:05:35,023   !!

2025-06-08T10:05:35,024           ********************************************************************************
2025-06-08T10:05:35,025           ############################
2025-06-08T10:05:35,025           # Package would be ignored #
2025-06-08T10:05:35,026           ############################
2025-06-08T10:05:35,027           Python recognizes 'multiqc.templates' as an importable package[^1],
2025-06-08T10:05:35,027           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,029           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,029           package, please make sure that 'multiqc.templates' is explicitly added
2025-06-08T10:05:35,030           to the `packages` configuration field.

2025-06-08T10:05:35,031           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,032           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,032           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,034           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,035           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,036           If you don't want 'multiqc.templates' to be distributed and are
2025-06-08T10:05:35,037           already explicitly excluding 'multiqc.templates' via
2025-06-08T10:05:35,037           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,038           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,039           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,040           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,042           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,043           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,044                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,044                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,045                 directory, all directories are treated like packages.
2025-06-08T10:05:35,046           ********************************************************************************

2025-06-08T10:05:35,048   !!
2025-06-08T10:05:35,048     check.warn(importable)
2025-06-08T10:05:35,049   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.default' is absent from the `packages` configuration.
2025-06-08T10:05:35,050   !!

2025-06-08T10:05:35,051           ********************************************************************************
2025-06-08T10:05:35,052           ############################
2025-06-08T10:05:35,052           # Package would be ignored #
2025-06-08T10:05:35,053           ############################
2025-06-08T10:05:35,054           Python recognizes 'multiqc.templates.default' as an importable package[^1],
2025-06-08T10:05:35,054           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,055           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,056           package, please make sure that 'multiqc.templates.default' is explicitly added
2025-06-08T10:05:35,057           to the `packages` configuration field.

2025-06-08T10:05:35,058           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,059           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,060           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,061           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,062           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,063           If you don't want 'multiqc.templates.default' to be distributed and are
2025-06-08T10:05:35,064           already explicitly excluding 'multiqc.templates.default' via
2025-06-08T10:05:35,064           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,065           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,065           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,067           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,068           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,069           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,070                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,070                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,071                 directory, all directories are treated like packages.
2025-06-08T10:05:35,071           ********************************************************************************

2025-06-08T10:05:35,073   !!
2025-06-08T10:05:35,073     check.warn(importable)
2025-06-08T10:05:35,074   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.default.assets.css' is absent from the `packages` configuration.
2025-06-08T10:05:35,074   !!

2025-06-08T10:05:35,075           ********************************************************************************
2025-06-08T10:05:35,076           ############################
2025-06-08T10:05:35,077           # Package would be ignored #
2025-06-08T10:05:35,077           ############################
2025-06-08T10:05:35,078           Python recognizes 'multiqc.templates.default.assets.css' as an importable package[^1],
2025-06-08T10:05:35,079           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,080           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,080           package, please make sure that 'multiqc.templates.default.assets.css' is explicitly added
2025-06-08T10:05:35,081           to the `packages` configuration field.

2025-06-08T10:05:35,082           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,083           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,083           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,085           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,086           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,087           If you don't want 'multiqc.templates.default.assets.css' to be distributed and are
2025-06-08T10:05:35,088           already explicitly excluding 'multiqc.templates.default.assets.css' via
2025-06-08T10:05:35,088           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,089           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,089           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,091           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,093           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,094           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,095                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,095                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,096                 directory, all directories are treated like packages.
2025-06-08T10:05:35,096           ********************************************************************************

2025-06-08T10:05:35,098   !!
2025-06-08T10:05:35,098     check.warn(importable)
2025-06-08T10:05:35,099   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.default.assets.fonts' is absent from the `packages` configuration.
2025-06-08T10:05:35,099   !!

2025-06-08T10:05:35,100           ********************************************************************************
2025-06-08T10:05:35,101           ############################
2025-06-08T10:05:35,102           # Package would be ignored #
2025-06-08T10:05:35,102           ############################
2025-06-08T10:05:35,103           Python recognizes 'multiqc.templates.default.assets.fonts' as an importable package[^1],
2025-06-08T10:05:35,103           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,105           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,105           package, please make sure that 'multiqc.templates.default.assets.fonts' is explicitly added
2025-06-08T10:05:35,106           to the `packages` configuration field.

2025-06-08T10:05:35,107           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,108           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,108           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,109           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,110           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,112           If you don't want 'multiqc.templates.default.assets.fonts' to be distributed and are
2025-06-08T10:05:35,112           already explicitly excluding 'multiqc.templates.default.assets.fonts' via
2025-06-08T10:05:35,113           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,113           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,114           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,115           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,116           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,118           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,119                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,119                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,120                 directory, all directories are treated like packages.
2025-06-08T10:05:35,121           ********************************************************************************

2025-06-08T10:05:35,122   !!
2025-06-08T10:05:35,123     check.warn(importable)
2025-06-08T10:05:35,123   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.default.assets.img' is absent from the `packages` configuration.
2025-06-08T10:05:35,124   !!

2025-06-08T10:05:35,125           ********************************************************************************
2025-06-08T10:05:35,126           ############################
2025-06-08T10:05:35,126           # Package would be ignored #
2025-06-08T10:05:35,127           ############################
2025-06-08T10:05:35,127           Python recognizes 'multiqc.templates.default.assets.img' as an importable package[^1],
2025-06-08T10:05:35,128           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,129           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,130           package, please make sure that 'multiqc.templates.default.assets.img' is explicitly added
2025-06-08T10:05:35,131           to the `packages` configuration field.

2025-06-08T10:05:35,132           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,133           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,133           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,135           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,136           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,137           If you don't want 'multiqc.templates.default.assets.img' to be distributed and are
2025-06-08T10:05:35,137           already explicitly excluding 'multiqc.templates.default.assets.img' via
2025-06-08T10:05:35,138           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,139           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,139           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,140           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,141           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,143           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,143                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,144                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,145                 directory, all directories are treated like packages.
2025-06-08T10:05:35,145           ********************************************************************************

2025-06-08T10:05:35,146   !!
2025-06-08T10:05:35,147     check.warn(importable)
2025-06-08T10:05:35,148   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.default.assets.js' is absent from the `packages` configuration.
2025-06-08T10:05:35,148   !!

2025-06-08T10:05:35,150           ********************************************************************************
2025-06-08T10:05:35,150           ############################
2025-06-08T10:05:35,151           # Package would be ignored #
2025-06-08T10:05:35,152           ############################
2025-06-08T10:05:35,153           Python recognizes 'multiqc.templates.default.assets.js' as an importable package[^1],
2025-06-08T10:05:35,154           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,155           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,156           package, please make sure that 'multiqc.templates.default.assets.js' is explicitly added
2025-06-08T10:05:35,156           to the `packages` configuration field.

2025-06-08T10:05:35,158           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,159           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,159           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,161           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,163           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,164           If you don't want 'multiqc.templates.default.assets.js' to be distributed and are
2025-06-08T10:05:35,164           already explicitly excluding 'multiqc.templates.default.assets.js' via
2025-06-08T10:05:35,165           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,166           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,167           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,168           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,169           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,171           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,171                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,172                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,172                 directory, all directories are treated like packages.
2025-06-08T10:05:35,173           ********************************************************************************

2025-06-08T10:05:35,174   !!
2025-06-08T10:05:35,174     check.warn(importable)
2025-06-08T10:05:35,175   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.default.assets.js.packages' is absent from the `packages` configuration.
2025-06-08T10:05:35,175   !!

2025-06-08T10:05:35,176           ********************************************************************************
2025-06-08T10:05:35,177           ############################
2025-06-08T10:05:35,177           # Package would be ignored #
2025-06-08T10:05:35,178           ############################
2025-06-08T10:05:35,178           Python recognizes 'multiqc.templates.default.assets.js.packages' as an importable package[^1],
2025-06-08T10:05:35,179           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,180           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,180           package, please make sure that 'multiqc.templates.default.assets.js.packages' is explicitly added
2025-06-08T10:05:35,181           to the `packages` configuration field.

2025-06-08T10:05:35,182           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,183           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,183           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,184           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,185           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,187           If you don't want 'multiqc.templates.default.assets.js.packages' to be distributed and are
2025-06-08T10:05:35,187           already explicitly excluding 'multiqc.templates.default.assets.js.packages' via
2025-06-08T10:05:35,188           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,188           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,189           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,190           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,191           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,193           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,194                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,194                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,195                 directory, all directories are treated like packages.
2025-06-08T10:05:35,195           ********************************************************************************

2025-06-08T10:05:35,197   !!
2025-06-08T10:05:35,197     check.warn(importable)
2025-06-08T10:05:35,198   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.default.assets.js.plots' is absent from the `packages` configuration.
2025-06-08T10:05:35,198   !!

2025-06-08T10:05:35,200           ********************************************************************************
2025-06-08T10:05:35,200           ############################
2025-06-08T10:05:35,201           # Package would be ignored #
2025-06-08T10:05:35,202           ############################
2025-06-08T10:05:35,202           Python recognizes 'multiqc.templates.default.assets.js.plots' as an importable package[^1],
2025-06-08T10:05:35,203           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,204           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,205           package, please make sure that 'multiqc.templates.default.assets.js.plots' is explicitly added
2025-06-08T10:05:35,205           to the `packages` configuration field.

2025-06-08T10:05:35,206           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,207           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,207           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,208           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,210           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,211           If you don't want 'multiqc.templates.default.assets.js.plots' to be distributed and are
2025-06-08T10:05:35,211           already explicitly excluding 'multiqc.templates.default.assets.js.plots' via
2025-06-08T10:05:35,212           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,212           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,213           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,214           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,215           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,217           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,217                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,218                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,218                 directory, all directories are treated like packages.
2025-06-08T10:05:35,219           ********************************************************************************

2025-06-08T10:05:35,220   !!
2025-06-08T10:05:35,221     check.warn(importable)
2025-06-08T10:05:35,222   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.gathered' is absent from the `packages` configuration.
2025-06-08T10:05:35,222   !!

2025-06-08T10:05:35,223           ********************************************************************************
2025-06-08T10:05:35,224           ############################
2025-06-08T10:05:35,224           # Package would be ignored #
2025-06-08T10:05:35,225           ############################
2025-06-08T10:05:35,225           Python recognizes 'multiqc.templates.gathered' as an importable package[^1],
2025-06-08T10:05:35,226           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,227           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,228           package, please make sure that 'multiqc.templates.gathered' is explicitly added
2025-06-08T10:05:35,229           to the `packages` configuration field.

2025-06-08T10:05:35,230           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,230           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,231           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,232           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,233           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,235           If you don't want 'multiqc.templates.gathered' to be distributed and are
2025-06-08T10:05:35,235           already explicitly excluding 'multiqc.templates.gathered' via
2025-06-08T10:05:35,236           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,236           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,237           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,238           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,239           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,241           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,241                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,242                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,242                 directory, all directories are treated like packages.
2025-06-08T10:05:35,243           ********************************************************************************

2025-06-08T10:05:35,244   !!
2025-06-08T10:05:35,245     check.warn(importable)
2025-06-08T10:05:35,245   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.geo' is absent from the `packages` configuration.
2025-06-08T10:05:35,246   !!

2025-06-08T10:05:35,247           ********************************************************************************
2025-06-08T10:05:35,247           ############################
2025-06-08T10:05:35,248           # Package would be ignored #
2025-06-08T10:05:35,249           ############################
2025-06-08T10:05:35,249           Python recognizes 'multiqc.templates.geo' as an importable package[^1],
2025-06-08T10:05:35,250           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,251           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,251           package, please make sure that 'multiqc.templates.geo' is explicitly added
2025-06-08T10:05:35,252           to the `packages` configuration field.

2025-06-08T10:05:35,253           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,254           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,254           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,255           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,256           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,257           If you don't want 'multiqc.templates.geo' to be distributed and are
2025-06-08T10:05:35,258           already explicitly excluding 'multiqc.templates.geo' via
2025-06-08T10:05:35,259           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,259           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,260           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,261           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,262           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,264           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,264                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,265                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,266                 directory, all directories are treated like packages.
2025-06-08T10:05:35,266           ********************************************************************************

2025-06-08T10:05:35,267   !!
2025-06-08T10:05:35,268     check.warn(importable)
2025-06-08T10:05:35,269   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.geo.assets.css' is absent from the `packages` configuration.
2025-06-08T10:05:35,269   !!

2025-06-08T10:05:35,271           ********************************************************************************
2025-06-08T10:05:35,272           ############################
2025-06-08T10:05:35,272           # Package would be ignored #
2025-06-08T10:05:35,273           ############################
2025-06-08T10:05:35,273           Python recognizes 'multiqc.templates.geo.assets.css' as an importable package[^1],
2025-06-08T10:05:35,274           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,275           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,276           package, please make sure that 'multiqc.templates.geo.assets.css' is explicitly added
2025-06-08T10:05:35,276           to the `packages` configuration field.

2025-06-08T10:05:35,278           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,279           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,279           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,280           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,282           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,284           If you don't want 'multiqc.templates.geo.assets.css' to be distributed and are
2025-06-08T10:05:35,284           already explicitly excluding 'multiqc.templates.geo.assets.css' via
2025-06-08T10:05:35,285           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,285           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,286           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,288           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,289           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,291           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,292                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,292                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,293                 directory, all directories are treated like packages.
2025-06-08T10:05:35,293           ********************************************************************************

2025-06-08T10:05:35,295   !!
2025-06-08T10:05:35,296     check.warn(importable)
2025-06-08T10:05:35,296   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.geo.assets.img' is absent from the `packages` configuration.
2025-06-08T10:05:35,297   !!

2025-06-08T10:05:35,298           ********************************************************************************
2025-06-08T10:05:35,299           ############################
2025-06-08T10:05:35,299           # Package would be ignored #
2025-06-08T10:05:35,300           ############################
2025-06-08T10:05:35,300           Python recognizes 'multiqc.templates.geo.assets.img' as an importable package[^1],
2025-06-08T10:05:35,301           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,303           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,304           package, please make sure that 'multiqc.templates.geo.assets.img' is explicitly added
2025-06-08T10:05:35,305           to the `packages` configuration field.

2025-06-08T10:05:35,306           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,307           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,308           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,309           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,310           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,312           If you don't want 'multiqc.templates.geo.assets.img' to be distributed and are
2025-06-08T10:05:35,312           already explicitly excluding 'multiqc.templates.geo.assets.img' via
2025-06-08T10:05:35,313           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,313           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,314           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,315           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,317           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,319           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,320                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,321                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,322                 directory, all directories are treated like packages.
2025-06-08T10:05:35,322           ********************************************************************************

2025-06-08T10:05:35,324   !!
2025-06-08T10:05:35,324     check.warn(importable)
2025-06-08T10:05:35,325   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.sections' is absent from the `packages` configuration.
2025-06-08T10:05:35,326   !!

2025-06-08T10:05:35,327           ********************************************************************************
2025-06-08T10:05:35,328           ############################
2025-06-08T10:05:35,329           # Package would be ignored #
2025-06-08T10:05:35,330           ############################
2025-06-08T10:05:35,330           Python recognizes 'multiqc.templates.sections' as an importable package[^1],
2025-06-08T10:05:35,331           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,332           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,333           package, please make sure that 'multiqc.templates.sections' is explicitly added
2025-06-08T10:05:35,334           to the `packages` configuration field.

2025-06-08T10:05:35,335           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,336           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,337           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,339           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,340           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,341           If you don't want 'multiqc.templates.sections' to be distributed and are
2025-06-08T10:05:35,342           already explicitly excluding 'multiqc.templates.sections' via
2025-06-08T10:05:35,342           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,343           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,344           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,345           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,347           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,349           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,350                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,350                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,351                 directory, all directories are treated like packages.
2025-06-08T10:05:35,352           ********************************************************************************

2025-06-08T10:05:35,353   !!
2025-06-08T10:05:35,354     check.warn(importable)
2025-06-08T10:05:35,355   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.templates.simple' is absent from the `packages` configuration.
2025-06-08T10:05:35,355   !!

2025-06-08T10:05:35,357           ********************************************************************************
2025-06-08T10:05:35,357           ############################
2025-06-08T10:05:35,358           # Package would be ignored #
2025-06-08T10:05:35,359           ############################
2025-06-08T10:05:35,359           Python recognizes 'multiqc.templates.simple' as an importable package[^1],
2025-06-08T10:05:35,360           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,361           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,362           package, please make sure that 'multiqc.templates.simple' is explicitly added
2025-06-08T10:05:35,363           to the `packages` configuration field.

2025-06-08T10:05:35,364           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,365           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,366           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,367           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,369           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,370           If you don't want 'multiqc.templates.simple' to be distributed and are
2025-06-08T10:05:35,371           already explicitly excluding 'multiqc.templates.simple' via
2025-06-08T10:05:35,372           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,372           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,373           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,374           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,376           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,378           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,379                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,380                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,381                 directory, all directories are treated like packages.
2025-06-08T10:05:35,381           ********************************************************************************

2025-06-08T10:05:35,383   !!
2025-06-08T10:05:35,384     check.warn(importable)
2025-06-08T10:05:35,384   /tmp/pip-build-env-3454cvri/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'multiqc.utils' is absent from the `packages` configuration.
2025-06-08T10:05:35,385   !!

2025-06-08T10:05:35,386           ********************************************************************************
2025-06-08T10:05:35,388           ############################
2025-06-08T10:05:35,388           # Package would be ignored #
2025-06-08T10:05:35,389           ############################
2025-06-08T10:05:35,390           Python recognizes 'multiqc.utils' as an importable package[^1],
2025-06-08T10:05:35,391           but it is absent from setuptools' `packages` configuration.

2025-06-08T10:05:35,392           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-08T10:05:35,392           package, please make sure that 'multiqc.utils' is explicitly added
2025-06-08T10:05:35,393           to the `packages` configuration field.

2025-06-08T10:05:35,395           Alternatively, you can also rely on setuptools' discovery methods
2025-06-08T10:05:35,395           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-08T10:05:35,396           instead of `find_packages(...)`/`find:`).

2025-06-08T10:05:35,397           You can read more about "package discovery" on setuptools documentation page:

2025-06-08T10:05:35,398           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-08T10:05:35,400           If you don't want 'multiqc.utils' to be distributed and are
2025-06-08T10:05:35,400           already explicitly excluding 'multiqc.utils' via
2025-06-08T10:05:35,401           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-08T10:05:35,402           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-08T10:05:35,403           combination with a more fine grained `package-data` configuration.

2025-06-08T10:05:35,404           You can read more about "package data files" on setuptools documentation page:

2025-06-08T10:05:35,405           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-08T10:05:35,407           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-08T10:05:35,408                 even if it does not contain any `.py` files.
2025-06-08T10:05:35,409                 On the other hand, currently there is no concept of package data
2025-06-08T10:05:35,409                 directory, all directories are treated like packages.
2025-06-08T10:05:35,410           ********************************************************************************

2025-06-08T10:05:35,412   !!
2025-06-08T10:05:35,413     check.warn(importable)
2025-06-08T10:05:35,413   copying multiqc/config_defaults.yaml -> build/lib/multiqc
2025-06-08T10:05:35,414   copying multiqc/py.typed -> build/lib/multiqc
2025-06-08T10:05:35,414   copying multiqc/search_patterns.yaml -> build/lib/multiqc
2025-06-08T10:05:35,415   creating build/lib/multiqc/core
2025-06-08T10:05:35,416   copying multiqc/core/__init__.py -> build/lib/multiqc/core
2025-06-08T10:05:35,416   copying multiqc/core/ai.py -> build/lib/multiqc/core
2025-06-08T10:05:35,417   copying multiqc/core/config_check.py -> build/lib/multiqc/core
2025-06-08T10:05:35,418   copying multiqc/core/exceptions.py -> build/lib/multiqc/core
2025-06-08T10:05:35,418   copying multiqc/core/exec_modules.py -> build/lib/multiqc/core
2025-06-08T10:05:35,419   copying multiqc/core/file_search.py -> build/lib/multiqc/core
2025-06-08T10:05:35,420   copying multiqc/core/log_and_rich.py -> build/lib/multiqc/core
2025-06-08T10:05:35,421   copying multiqc/core/order_modules_and_sections.py -> build/lib/multiqc/core
2025-06-08T10:05:35,421   copying multiqc/core/plot_data_store.py -> build/lib/multiqc/core
2025-06-08T10:05:35,422   copying multiqc/core/plugin_hooks.py -> build/lib/multiqc/core
2025-06-08T10:05:35,423   copying multiqc/core/software_versions.py -> build/lib/multiqc/core
2025-06-08T10:05:35,424   copying multiqc/core/strict_helpers.py -> build/lib/multiqc/core
2025-06-08T10:05:35,424   copying multiqc/core/tmp_dir.py -> build/lib/multiqc/core
2025-06-08T10:05:35,425   copying multiqc/core/update_config.py -> build/lib/multiqc/core
2025-06-08T10:05:35,426   copying multiqc/core/version_check.py -> build/lib/multiqc/core
2025-06-08T10:05:35,426   copying multiqc/core/write_results.py -> build/lib/multiqc/core
2025-06-08T10:05:35,427   creating build/lib/multiqc/core/special_case_modules
2025-06-08T10:05:35,429   copying multiqc/core/special_case_modules/custom_content.py -> build/lib/multiqc/core/special_case_modules
2025-06-08T10:05:35,429   copying multiqc/core/special_case_modules/load_multiqc_data.py -> build/lib/multiqc/core/special_case_modules
2025-06-08T10:05:35,429   copying multiqc/core/special_case_modules/profile_runtime.py -> build/lib/multiqc/core/special_case_modules
2025-06-08T10:05:35,430   copying multiqc/core/special_case_modules/software_versions.py -> build/lib/multiqc/core/special_case_modules
2025-06-08T10:05:35,431   creating build/lib/multiqc/modules
2025-06-08T10:05:35,431   copying multiqc/modules/__init__.py -> build/lib/multiqc/modules
2025-06-08T10:05:35,432   creating build/lib/multiqc/modules/adapterremoval
2025-06-08T10:05:35,432   copying multiqc/modules/adapterremoval/__init__.py -> build/lib/multiqc/modules/adapterremoval
2025-06-08T10:05:35,433   copying multiqc/modules/adapterremoval/adapterremoval.py -> build/lib/multiqc/modules/adapterremoval
2025-06-08T10:05:35,433   creating build/lib/multiqc/modules/afterqc
2025-06-08T10:05:35,434   copying multiqc/modules/afterqc/__init__.py -> build/lib/multiqc/modules/afterqc
2025-06-08T10:05:35,434   copying multiqc/modules/afterqc/afterqc.py -> build/lib/multiqc/modules/afterqc
2025-06-08T10:05:35,435   creating build/lib/multiqc/modules/anglerfish
2025-06-08T10:05:35,435   copying multiqc/modules/anglerfish/__init__.py -> build/lib/multiqc/modules/anglerfish
2025-06-08T10:05:35,436   copying multiqc/modules/anglerfish/anglerfish.py -> build/lib/multiqc/modules/anglerfish
2025-06-08T10:05:35,436   creating build/lib/multiqc/modules/ataqv
2025-06-08T10:05:35,437   copying multiqc/modules/ataqv/__init__.py -> build/lib/multiqc/modules/ataqv
2025-06-08T10:05:35,437   copying multiqc/modules/ataqv/ataqv.py -> build/lib/multiqc/modules/ataqv
2025-06-08T10:05:35,438   creating build/lib/multiqc/modules/bakta
2025-06-08T10:05:35,439   copying multiqc/modules/bakta/__init__.py -> build/lib/multiqc/modules/bakta
2025-06-08T10:05:35,440   copying multiqc/modules/bakta/bakta.py -> build/lib/multiqc/modules/bakta
2025-06-08T10:05:35,440   creating build/lib/multiqc/modules/bamdst
2025-06-08T10:05:35,441   copying multiqc/modules/bamdst/__init__.py -> build/lib/multiqc/modules/bamdst
2025-06-08T10:05:35,441   copying multiqc/modules/bamdst/bamdst.py -> build/lib/multiqc/modules/bamdst
2025-06-08T10:05:35,442   creating build/lib/multiqc/modules/bamtools
2025-06-08T10:05:35,443   copying multiqc/modules/bamtools/__init__.py -> build/lib/multiqc/modules/bamtools
2025-06-08T10:05:35,443   copying multiqc/modules/bamtools/bamtools.py -> build/lib/multiqc/modules/bamtools
2025-06-08T10:05:35,444   copying multiqc/modules/bamtools/stats.py -> build/lib/multiqc/modules/bamtools
2025-06-08T10:05:35,444   creating build/lib/multiqc/modules/bases2fastq
2025-06-08T10:05:35,445   copying multiqc/modules/bases2fastq/__init__.py -> build/lib/multiqc/modules/bases2fastq
2025-06-08T10:05:35,445   copying multiqc/modules/bases2fastq/bases2fastq.py -> build/lib/multiqc/modules/bases2fastq
2025-06-08T10:05:35,446   copying multiqc/modules/bases2fastq/plot_project_runs.py -> build/lib/multiqc/modules/bases2fastq
2025-06-08T10:05:35,447   copying multiqc/modules/bases2fastq/plot_runs.py -> build/lib/multiqc/modules/bases2fastq
2025-06-08T10:05:35,447   copying multiqc/modules/bases2fastq/plot_samples.py -> build/lib/multiqc/modules/bases2fastq
2025-06-08T10:05:35,448   creating build/lib/multiqc/modules/bbduk
2025-06-08T10:05:35,449   copying multiqc/modules/bbduk/__init__.py -> build/lib/multiqc/modules/bbduk
2025-06-08T10:05:35,449   copying multiqc/modules/bbduk/bbduk.py -> build/lib/multiqc/modules/bbduk
2025-06-08T10:05:35,450   creating build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,451   copying multiqc/modules/bbmap/__init__.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,451   copying multiqc/modules/bbmap/bbmap.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,452   copying multiqc/modules/bbmap/bbmap_filetypes.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,453   copying multiqc/modules/bbmap/plot_aqhist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,453   copying multiqc/modules/bbmap/plot_basic_hist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,454   copying multiqc/modules/bbmap/plot_bhist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,455   copying multiqc/modules/bbmap/plot_bqhist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,455   copying multiqc/modules/bbmap/plot_covhist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,456   copying multiqc/modules/bbmap/plot_idhist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,456   copying multiqc/modules/bbmap/plot_ihist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,457   copying multiqc/modules/bbmap/plot_indelhist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,458   copying multiqc/modules/bbmap/plot_mhist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,458   copying multiqc/modules/bbmap/plot_qahist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,459   copying multiqc/modules/bbmap/plot_qchist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,459   copying multiqc/modules/bbmap/plot_qhist.py -> build/lib/multiqc/modules/bbmap
2025-06-08T10:05:35,460   creating build/lib/multiqc/modules/bcftools
2025-06-08T10:05:35,461   copying multiqc/modules/bcftools/__init__.py -> build/lib/multiqc/modules/bcftools
2025-06-08T10:05:35,461   copying multiqc/modules/bcftools/bcftools.py -> build/lib/multiqc/modules/bcftools
2025-06-08T10:05:35,462   copying multiqc/modules/bcftools/stats.py -> build/lib/multiqc/modules/bcftools
2025-06-08T10:05:35,462   creating build/lib/multiqc/modules/bcl2fastq
2025-06-08T10:05:35,463   copying multiqc/modules/bcl2fastq/__init__.py -> build/lib/multiqc/modules/bcl2fastq
2025-06-08T10:05:35,464   copying multiqc/modules/bcl2fastq/bcl2fastq.py -> build/lib/multiqc/modules/bcl2fastq
2025-06-08T10:05:35,465   creating build/lib/multiqc/modules/bclconvert
2025-06-08T10:05:35,466   copying multiqc/modules/bclconvert/__init__.py -> build/lib/multiqc/modules/bclconvert
2025-06-08T10:05:35,467   copying multiqc/modules/bclconvert/bclconvert.py -> build/lib/multiqc/modules/bclconvert
2025-06-08T10:05:35,468   creating build/lib/multiqc/modules/biobambam2
2025-06-08T10:05:35,468   copying multiqc/modules/biobambam2/__init__.py -> build/lib/multiqc/modules/biobambam2
2025-06-08T10:05:35,469   copying multiqc/modules/biobambam2/biobambam2.py -> build/lib/multiqc/modules/biobambam2
2025-06-08T10:05:35,470   creating build/lib/multiqc/modules/biobloomtools
2025-06-08T10:05:35,470   copying multiqc/modules/biobloomtools/__init__.py -> build/lib/multiqc/modules/biobloomtools
2025-06-08T10:05:35,471   copying multiqc/modules/biobloomtools/biobloomtools.py -> build/lib/multiqc/modules/biobloomtools
2025-06-08T10:05:35,472   creating build/lib/multiqc/modules/biscuit
2025-06-08T10:05:35,472   copying multiqc/modules/biscuit/__init__.py -> build/lib/multiqc/modules/biscuit
2025-06-08T10:05:35,473   copying multiqc/modules/biscuit/biscuit.py -> build/lib/multiqc/modules/biscuit
2025-06-08T10:05:35,474   creating build/lib/multiqc/modules/bismark
2025-06-08T10:05:35,474   copying multiqc/modules/bismark/__init__.py -> build/lib/multiqc/modules/bismark
2025-06-08T10:05:35,475   copying multiqc/modules/bismark/bismark.py -> build/lib/multiqc/modules/bismark
2025-06-08T10:05:35,475   creating build/lib/multiqc/modules/bowtie1
2025-06-08T10:05:35,476   copying multiqc/modules/bowtie1/__init__.py -> build/lib/multiqc/modules/bowtie1
2025-06-08T10:05:35,477   copying multiqc/modules/bowtie1/bowtie1.py -> build/lib/multiqc/modules/bowtie1
2025-06-08T10:05:35,477   creating build/lib/multiqc/modules/bowtie2
2025-06-08T10:05:35,478   copying multiqc/modules/bowtie2/__init__.py -> build/lib/multiqc/modules/bowtie2
2025-06-08T10:05:35,479   copying multiqc/modules/bowtie2/bowtie2.py -> build/lib/multiqc/modules/bowtie2
2025-06-08T10:05:35,479   creating build/lib/multiqc/modules/busco
2025-06-08T10:05:35,480   copying multiqc/modules/busco/__init__.py -> build/lib/multiqc/modules/busco
2025-06-08T10:05:35,481   copying multiqc/modules/busco/busco.py -> build/lib/multiqc/modules/busco
2025-06-08T10:05:35,481   creating build/lib/multiqc/modules/bustools
2025-06-08T10:05:35,482   copying multiqc/modules/bustools/__init__.py -> build/lib/multiqc/modules/bustools
2025-06-08T10:05:35,482   copying multiqc/modules/bustools/bustools.py -> build/lib/multiqc/modules/bustools
2025-06-08T10:05:35,483   creating build/lib/multiqc/modules/ccs
2025-06-08T10:05:35,483   copying multiqc/modules/ccs/__init__.py -> build/lib/multiqc/modules/ccs
2025-06-08T10:05:35,484   copying multiqc/modules/ccs/ccs.py -> build/lib/multiqc/modules/ccs
2025-06-08T10:05:35,484   creating build/lib/multiqc/modules/ccs/tests
2025-06-08T10:05:35,485   copying multiqc/modules/ccs/tests/__init__.py -> build/lib/multiqc/modules/ccs/tests
2025-06-08T10:05:35,485   copying multiqc/modules/ccs/tests/test_ccs.py -> build/lib/multiqc/modules/ccs/tests
2025-06-08T10:05:35,486   creating build/lib/multiqc/modules/cellranger
2025-06-08T10:05:35,486   copying multiqc/modules/cellranger/__init__.py -> build/lib/multiqc/modules/cellranger
2025-06-08T10:05:35,487   copying multiqc/modules/cellranger/cellranger.py -> build/lib/multiqc/modules/cellranger
2025-06-08T10:05:35,488   copying multiqc/modules/cellranger/count.py -> build/lib/multiqc/modules/cellranger
2025-06-08T10:05:35,488   copying multiqc/modules/cellranger/utils.py -> build/lib/multiqc/modules/cellranger
2025-06-08T10:05:35,489   copying multiqc/modules/cellranger/vdj.py -> build/lib/multiqc/modules/cellranger
2025-06-08T10:05:35,489   creating build/lib/multiqc/modules/cellranger_arc
2025-06-08T10:05:35,490   copying multiqc/modules/cellranger_arc/__init__.py -> build/lib/multiqc/modules/cellranger_arc
2025-06-08T10:05:35,491   copying multiqc/modules/cellranger_arc/cellranger_arc.py -> build/lib/multiqc/modules/cellranger_arc
2025-06-08T10:05:35,491   copying multiqc/modules/cellranger_arc/utils.py -> build/lib/multiqc/modules/cellranger_arc
2025-06-08T10:05:35,492   creating build/lib/multiqc/modules/cellranger_arc/tests
2025-06-08T10:05:35,493   copying multiqc/modules/cellranger_arc/tests/__init__.py -> build/lib/multiqc/modules/cellranger_arc/tests
2025-06-08T10:05:35,493   copying multiqc/modules/cellranger_arc/tests/test_cellranger_arc.py -> build/lib/multiqc/modules/cellranger_arc/tests
2025-06-08T10:05:35,494   creating build/lib/multiqc/modules/cells2stats
2025-06-08T10:05:35,494   copying multiqc/modules/cells2stats/__init__.py -> build/lib/multiqc/modules/cells2stats
2025-06-08T10:05:35,495   copying multiqc/modules/cells2stats/cells2stats.py -> build/lib/multiqc/modules/cells2stats
2025-06-08T10:05:35,496   copying multiqc/modules/cells2stats/cells2stats_bar_plots.py -> build/lib/multiqc/modules/cells2stats
2025-06-08T10:05:35,497   copying multiqc/modules/cells2stats/cells2stats_tables.py -> build/lib/multiqc/modules/cells2stats
2025-06-08T10:05:35,497   copying multiqc/modules/cells2stats/queries.py -> build/lib/multiqc/modules/cells2stats
2025-06-08T10:05:35,498   copying multiqc/modules/cells2stats/utils.py -> build/lib/multiqc/modules/cells2stats
2025-06-08T10:05:35,498   creating build/lib/multiqc/modules/checkm
2025-06-08T10:05:35,499   copying multiqc/modules/checkm/__init__.py -> build/lib/multiqc/modules/checkm
2025-06-08T10:05:35,500   copying multiqc/modules/checkm/checkm.py -> build/lib/multiqc/modules/checkm
2025-06-08T10:05:35,500   creating build/lib/multiqc/modules/checkm2
2025-06-08T10:05:35,501   copying multiqc/modules/checkm2/__init__.py -> build/lib/multiqc/modules/checkm2
2025-06-08T10:05:35,501   copying multiqc/modules/checkm2/checkm2.py -> build/lib/multiqc/modules/checkm2
2025-06-08T10:05:35,502   creating build/lib/multiqc/modules/checkqc
2025-06-08T10:05:35,502   copying multiqc/modules/checkqc/__init__.py -> build/lib/multiqc/modules/checkqc
2025-06-08T10:05:35,503   copying multiqc/modules/checkqc/checkqc.py -> build/lib/multiqc/modules/checkqc
2025-06-08T10:05:35,504   creating build/lib/multiqc/modules/clipandmerge
2025-06-08T10:05:35,505   copying multiqc/modules/clipandmerge/__init__.py -> build/lib/multiqc/modules/clipandmerge
2025-06-08T10:05:35,506   copying multiqc/modules/clipandmerge/clipandmerge.py -> build/lib/multiqc/modules/clipandmerge
2025-06-08T10:05:35,506   creating build/lib/multiqc/modules/clusterflow
2025-06-08T10:05:35,507   copying multiqc/modules/clusterflow/__init__.py -> build/lib/multiqc/modules/clusterflow
2025-06-08T10:05:35,507   copying multiqc/modules/clusterflow/clusterflow.py -> build/lib/multiqc/modules/clusterflow
2025-06-08T10:05:35,508   creating build/lib/multiqc/modules/conpair
2025-06-08T10:05:35,508   copying multiqc/modules/conpair/__init__.py -> build/lib/multiqc/modules/conpair
2025-06-08T10:05:35,509   copying multiqc/modules/conpair/conpair.py -> build/lib/multiqc/modules/conpair
2025-06-08T10:05:35,509   creating build/lib/multiqc/modules/cutadapt
2025-06-08T10:05:35,510   copying multiqc/modules/cutadapt/__init__.py -> build/lib/multiqc/modules/cutadapt
2025-06-08T10:05:35,511   copying multiqc/modules/cutadapt/cutadapt.py -> build/lib/multiqc/modules/cutadapt
2025-06-08T10:05:35,511   creating build/lib/multiqc/modules/damageprofiler
2025-06-08T10:05:35,512   copying multiqc/modules/damageprofiler/__init__.py -> build/lib/multiqc/modules/damageprofiler
2025-06-08T10:05:35,512   copying multiqc/modules/damageprofiler/damageprofiler.py -> build/lib/multiqc/modules/damageprofiler
2025-06-08T10:05:35,513   creating build/lib/multiqc/modules/dedup
2025-06-08T10:05:35,514   copying multiqc/modules/dedup/__init__.py -> build/lib/multiqc/modules/dedup
2025-06-08T10:05:35,514   copying multiqc/modules/dedup/dedup.py -> build/lib/multiqc/modules/dedup
2025-06-08T10:05:35,515   creating build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,515   copying multiqc/modules/deeptools/__init__.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,516   copying multiqc/modules/deeptools/bamPEFragmentSizeDistribution.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,517   copying multiqc/modules/deeptools/bamPEFragmentSizeTable.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,517   copying multiqc/modules/deeptools/deeptools.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,518   copying multiqc/modules/deeptools/estimateReadFiltering.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,519   copying multiqc/modules/deeptools/plotCorrelation.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,519   copying multiqc/modules/deeptools/plotCoverage.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,520   copying multiqc/modules/deeptools/plotEnrichment.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,521   copying multiqc/modules/deeptools/plotFingerprint.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,521   copying multiqc/modules/deeptools/plotPCA.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,522   copying multiqc/modules/deeptools/plotProfile.py -> build/lib/multiqc/modules/deeptools
2025-06-08T10:05:35,522   creating build/lib/multiqc/modules/diamond
2025-06-08T10:05:35,523   copying multiqc/modules/diamond/__init__.py -> build/lib/multiqc/modules/diamond
2025-06-08T10:05:35,524   copying multiqc/modules/diamond/diamond.py -> build/lib/multiqc/modules/diamond
2025-06-08T10:05:35,525   creating build/lib/multiqc/modules/disambiguate
2025-06-08T10:05:35,525   copying multiqc/modules/disambiguate/__init__.py -> build/lib/multiqc/modules/disambiguate
2025-06-08T10:05:35,526   copying multiqc/modules/disambiguate/disambiguate.py -> build/lib/multiqc/modules/disambiguate
2025-06-08T10:05:35,526   creating build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,527   copying multiqc/modules/dragen/__init__.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,528   copying multiqc/modules/dragen/coverage_hist.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,528   copying multiqc/modules/dragen/coverage_metrics.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,529   copying multiqc/modules/dragen/coverage_per_contig.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,530   copying multiqc/modules/dragen/dragen.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,530   copying multiqc/modules/dragen/dragen_gc_metrics.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,531   copying multiqc/modules/dragen/fragment_length.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,531   copying multiqc/modules/dragen/mapping_metrics.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,532   copying multiqc/modules/dragen/overall_mean_cov.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,532   copying multiqc/modules/dragen/ploidy_estimation_metrics.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,534   copying multiqc/modules/dragen/rna_quant_metrics.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,537   copying multiqc/modules/dragen/rna_transcript_cov.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,539   copying multiqc/modules/dragen/sc_atac_metrics.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,542   copying multiqc/modules/dragen/sc_rna_metrics.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,545   copying multiqc/modules/dragen/time_metrics.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,547   copying multiqc/modules/dragen/trimmer_metrics.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,550   copying multiqc/modules/dragen/utils.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,553   copying multiqc/modules/dragen/vc_metrics.py -> build/lib/multiqc/modules/dragen
2025-06-08T10:05:35,557   creating build/lib/multiqc/modules/dragen/tests
2025-06-08T10:05:35,558   copying multiqc/modules/dragen/tests/__init__.py -> build/lib/multiqc/modules/dragen/tests
2025-06-08T10:05:35,560   copying multiqc/modules/dragen/tests/test_dragen.py -> build/lib/multiqc/modules/dragen/tests
2025-06-08T10:05:35,563   creating build/lib/multiqc/modules/dragen_fastqc
2025-06-08T10:05:35,564   copying multiqc/modules/dragen_fastqc/__init__.py -> build/lib/multiqc/modules/dragen_fastqc
2025-06-08T10:05:35,566   copying multiqc/modules/dragen_fastqc/base_metrics.py -> build/lib/multiqc/modules/dragen_fastqc
2025-06-08T10:05:35,569   copying multiqc/modules/dragen_fastqc/content_metrics.py -> build/lib/multiqc/modules/dragen_fastqc
2025-06-08T10:05:35,572   copying multiqc/modules/dragen_fastqc/dragen_fastqc.py -> build/lib/multiqc/modules/dragen_fastqc
2025-06-08T10:05:35,575   copying multiqc/modules/dragen_fastqc/gc_metrics.py -> build/lib/multiqc/modules/dragen_fastqc
2025-06-08T10:05:35,578   copying multiqc/modules/dragen_fastqc/read_metrics.py -> build/lib/multiqc/modules/dragen_fastqc
2025-06-08T10:05:35,582   copying multiqc/modules/dragen_fastqc/util.py -> build/lib/multiqc/modules/dragen_fastqc
2025-06-08T10:05:35,584   creating build/lib/multiqc/modules/dragen_fastqc/assets/js
2025-06-08T10:05:35,586   copying multiqc/modules/dragen_fastqc/assets/js/multiqc_dragen_fastqc.js -> build/lib/multiqc/modules/dragen_fastqc/assets/js
2025-06-08T10:05:35,589   creating build/lib/multiqc/modules/eigenstratdatabasetools
2025-06-08T10:05:35,591   copying multiqc/modules/eigenstratdatabasetools/__init__.py -> build/lib/multiqc/modules/eigenstratdatabasetools
2025-06-08T10:05:35,593   copying multiqc/modules/eigenstratdatabasetools/eigenstratdatabasetools.py -> build/lib/multiqc/modules/eigenstratdatabasetools
2025-06-08T10:05:35,596   creating build/lib/multiqc/modules/fastp
2025-06-08T10:05:35,597   copying multiqc/modules/fastp/__init__.py -> build/lib/multiqc/modules/fastp
2025-06-08T10:05:35,600   copying multiqc/modules/fastp/fastp.py -> build/lib/multiqc/modules/fastp
2025-06-08T10:05:35,603   creating build/lib/multiqc/modules/fastq_screen
2025-06-08T10:05:35,604   copying multiqc/modules/fastq_screen/__init__.py -> build/lib/multiqc/modules/fastq_screen
2025-06-08T10:05:35,607   copying multiqc/modules/fastq_screen/fastq_screen.py -> build/lib/multiqc/modules/fastq_screen
2025-06-08T10:05:35,610   creating build/lib/multiqc/modules/fastqc
2025-06-08T10:05:35,611   copying multiqc/modules/fastqc/__init__.py -> build/lib/multiqc/modules/fastqc
2025-06-08T10:05:35,614   copying multiqc/modules/fastqc/fastqc.py -> build/lib/multiqc/modules/fastqc
2025-06-08T10:05:35,618   creating build/lib/multiqc/modules/fastqc/assets/css
2025-06-08T10:05:35,620   copying multiqc/modules/fastqc/assets/css/multiqc_fastqc.css -> build/lib/multiqc/modules/fastqc/assets/css
2025-06-08T10:05:35,622   creating build/lib/multiqc/modules/fastqc/assets/js
2025-06-08T10:05:35,623   copying multiqc/modules/fastqc/assets/js/multiqc_fastqc.js -> build/lib/multiqc/modules/fastqc/assets/js
2025-06-08T10:05:35,627   creating build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc
2025-06-08T10:05:35,628   copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_genome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc
2025-06-08T10:05:35,630   copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_txome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc
2025-06-08T10:05:35,633   copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_genome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc
2025-06-08T10:05:35,635   copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_txome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc
2025-06-08T10:05:35,638   creating build/lib/multiqc/modules/featurecounts
2025-06-08T10:05:35,639   copying multiqc/modules/featurecounts/__init__.py -> build/lib/multiqc/modules/featurecounts
2025-06-08T10:05:35,642   copying multiqc/modules/featurecounts/featurecounts.py -> build/lib/multiqc/modules/featurecounts
2025-06-08T10:05:35,644   creating build/lib/multiqc/modules/fgbio
2025-06-08T10:05:35,645   copying multiqc/modules/fgbio/__init__.py -> build/lib/multiqc/modules/fgbio
2025-06-08T10:05:35,648   copying multiqc/modules/fgbio/error_rate_by_read_position.py -> build/lib/multiqc/modules/fgbio
2025-06-08T10:05:35,651   copying multiqc/modules/fgbio/fgbio.py -> build/lib/multiqc/modules/fgbio
2025-06-08T10:05:35,653   copying multiqc/modules/fgbio/group_reads_by_umi.py -> build/lib/multiqc/modules/fgbio
2025-06-08T10:05:35,656   creating build/lib/multiqc/modules/filtlong
2025-06-08T10:05:35,657   copying multiqc/modules/filtlong/__init__.py -> build/lib/multiqc/modules/filtlong
2025-06-08T10:05:35,659   copying multiqc/modules/filtlong/filtlong.py -> build/lib/multiqc/modules/filtlong
2025-06-08T10:05:35,662   creating build/lib/multiqc/modules/flash
2025-06-08T10:05:35,663   copying multiqc/modules/flash/__init__.py -> build/lib/multiqc/modules/flash
2025-06-08T10:05:35,666   copying multiqc/modules/flash/flash.py -> build/lib/multiqc/modules/flash
2025-06-08T10:05:35,669   creating build/lib/multiqc/modules/flexbar
2025-06-08T10:05:35,670   copying multiqc/modules/flexbar/__init__.py -> build/lib/multiqc/modules/flexbar
2025-06-08T10:05:35,672   copying multiqc/modules/flexbar/flexbar.py -> build/lib/multiqc/modules/flexbar
2025-06-08T10:05:35,675   creating build/lib/multiqc/modules/freyja
2025-06-08T10:05:35,676   copying multiqc/modules/freyja/__init__.py -> build/lib/multiqc/modules/freyja
2025-06-08T10:05:35,679   copying multiqc/modules/freyja/freyja.py -> build/lib/multiqc/modules/freyja
2025-06-08T10:05:35,682   creating build/lib/multiqc/modules/ganon
2025-06-08T10:05:35,683   copying multiqc/modules/ganon/__init__.py -> build/lib/multiqc/modules/ganon
2025-06-08T10:05:35,686   copying multiqc/modules/ganon/ganon.py -> build/lib/multiqc/modules/ganon
2025-06-08T10:05:35,689   creating build/lib/multiqc/modules/gatk
2025-06-08T10:05:35,690   copying multiqc/modules/gatk/__init__.py -> build/lib/multiqc/modules/gatk
2025-06-08T10:05:35,693   copying multiqc/modules/gatk/analyze_saturation_mutagenesis.py -> build/lib/multiqc/modules/gatk
2025-06-08T10:05:35,696   copying multiqc/modules/gatk/base_recalibrator.py -> build/lib/multiqc/modules/gatk
2025-06-08T10:05:35,699   copying multiqc/modules/gatk/gatk.py -> build/lib/multiqc/modules/gatk
2025-06-08T10:05:35,702   copying multiqc/modules/gatk/utils.py -> build/lib/multiqc/modules/gatk
2025-06-08T10:05:35,704   copying multiqc/modules/gatk/varianteval.py -> build/lib/multiqc/modules/gatk
2025-06-08T10:05:35,707   creating build/lib/multiqc/modules/gffcompare
2025-06-08T10:05:35,709   copying multiqc/modules/gffcompare/__init__.py -> build/lib/multiqc/modules/gffcompare
2025-06-08T10:05:35,711   copying multiqc/modules/gffcompare/gffcompare.py -> build/lib/multiqc/modules/gffcompare
2025-06-08T10:05:35,714   creating build/lib/multiqc/modules/glimpse
2025-06-08T10:05:35,715   copying multiqc/modules/glimpse/__init__.py -> build/lib/multiqc/modules/glimpse
2025-06-08T10:05:35,717   copying multiqc/modules/glimpse/err_grp.py -> build/lib/multiqc/modules/glimpse
2025-06-08T10:05:35,720   copying multiqc/modules/glimpse/err_spl.py -> build/lib/multiqc/modules/glimpse
2025-06-08T10:05:35,723   copying multiqc/modules/glimpse/glimpse.py -> build/lib/multiqc/modules/glimpse
2025-06-08T10:05:35,726   creating build/lib/multiqc/modules/goleft_indexcov
2025-06-08T10:05:35,727   copying multiqc/modules/goleft_indexcov/__init__.py -> build/lib/multiqc/modules/goleft_indexcov
2025-06-08T10:05:35,730   copying multiqc/modules/goleft_indexcov/goleft_indexcov.py -> build/lib/multiqc/modules/goleft_indexcov
2025-06-08T10:05:35,733   creating build/lib/multiqc/modules/gopeaks
2025-06-08T10:05:35,734   copying multiqc/modules/gopeaks/__init__.py -> build/lib/multiqc/modules/gopeaks
2025-06-08T10:05:35,737   copying multiqc/modules/gopeaks/gopeaks.py -> build/lib/multiqc/modules/gopeaks
2025-06-08T10:05:35,739   creating build/lib/multiqc/modules/gtdbtk
2025-06-08T10:05:35,741   copying multiqc/modules/gtdbtk/__init__.py -> build/lib/multiqc/modules/gtdbtk
2025-06-08T10:05:35,743   copying multiqc/modules/gtdbtk/gtdbtk.py -> build/lib/multiqc/modules/gtdbtk
2025-06-08T10:05:35,746   creating build/lib/multiqc/modules/haplocheck
2025-06-08T10:05:35,748   copying multiqc/modules/haplocheck/__init__.py -> build/lib/multiqc/modules/haplocheck
2025-06-08T10:05:35,750   copying multiqc/modules/haplocheck/haplocheck.py -> build/lib/multiqc/modules/haplocheck
2025-06-08T10:05:35,753   creating build/lib/multiqc/modules/happy
2025-06-08T10:05:35,754   copying multiqc/modules/happy/__init__.py -> build/lib/multiqc/modules/happy
2025-06-08T10:05:35,756   copying multiqc/modules/happy/happy.py -> build/lib/multiqc/modules/happy
2025-06-08T10:05:35,759   creating build/lib/multiqc/modules/hicexplorer
2025-06-08T10:05:35,760   copying multiqc/modules/hicexplorer/__init__.py -> build/lib/multiqc/modules/hicexplorer
2025-06-08T10:05:35,763   copying multiqc/modules/hicexplorer/hicexplorer.py -> build/lib/multiqc/modules/hicexplorer
2025-06-08T10:05:35,766   creating build/lib/multiqc/modules/hicpro
2025-06-08T10:05:35,767   copying multiqc/modules/hicpro/__init__.py -> build/lib/multiqc/modules/hicpro
2025-06-08T10:05:35,770   copying multiqc/modules/hicpro/hicpro.py -> build/lib/multiqc/modules/hicpro
2025-06-08T10:05:35,774   creating build/lib/multiqc/modules/hicup
2025-06-08T10:05:35,775   copying multiqc/modules/hicup/__init__.py -> build/lib/multiqc/modules/hicup
2025-06-08T10:05:35,777   copying multiqc/modules/hicup/hicup.py -> build/lib/multiqc/modules/hicup
2025-06-08T10:05:35,780   creating build/lib/multiqc/modules/hifiasm
2025-06-08T10:05:35,781   copying multiqc/modules/hifiasm/__init__.py -> build/lib/multiqc/modules/hifiasm
2025-06-08T10:05:35,784   copying multiqc/modules/hifiasm/hifiasm.py -> build/lib/multiqc/modules/hifiasm
2025-06-08T10:05:35,787   creating build/lib/multiqc/modules/hisat2
2025-06-08T10:05:35,788   copying multiqc/modules/hisat2/__init__.py -> build/lib/multiqc/modules/hisat2
2025-06-08T10:05:35,791   copying multiqc/modules/hisat2/hisat2.py -> build/lib/multiqc/modules/hisat2
2025-06-08T10:05:35,794   creating build/lib/multiqc/modules/homer
2025-06-08T10:05:35,795   copying multiqc/modules/homer/__init__.py -> build/lib/multiqc/modules/homer
2025-06-08T10:05:35,798   copying multiqc/modules/homer/findpeaks.py -> build/lib/multiqc/modules/homer
2025-06-08T10:05:35,800   copying multiqc/modules/homer/homer.py -> build/lib/multiqc/modules/homer
2025-06-08T10:05:35,803   copying multiqc/modules/homer/tagdirectory.py -> build/lib/multiqc/modules/homer
2025-06-08T10:05:35,806   creating build/lib/multiqc/modules/hops
2025-06-08T10:05:35,807   copying multiqc/modules/hops/__init__.py -> build/lib/multiqc/modules/hops
2025-06-08T10:05:35,810   copying multiqc/modules/hops/hops.py -> build/lib/multiqc/modules/hops
2025-06-08T10:05:35,813   creating build/lib/multiqc/modules/hostile
2025-06-08T10:05:35,814   copying multiqc/modules/hostile/__init__.py -> build/lib/multiqc/modules/hostile
2025-06-08T10:05:35,817   copying multiqc/modules/hostile/hostile.py -> build/lib/multiqc/modules/hostile
2025-06-08T10:05:35,820   creating build/lib/multiqc/modules/htseq
2025-06-08T10:05:35,822   copying multiqc/modules/htseq/__init__.py -> build/lib/multiqc/modules/htseq
2025-06-08T10:05:35,824   copying multiqc/modules/htseq/htseq.py -> build/lib/multiqc/modules/htseq
2025-06-08T10:05:35,828   creating build/lib/multiqc/modules/humid
2025-06-08T10:05:35,829   copying multiqc/modules/humid/__init__.py -> build/lib/multiqc/modules/humid
2025-06-08T10:05:35,831   copying multiqc/modules/humid/clusters.py -> build/lib/multiqc/modules/humid
2025-06-08T10:05:35,834   copying multiqc/modules/humid/counts.py -> build/lib/multiqc/modules/humid
2025-06-08T10:05:35,837   copying multiqc/modules/humid/humid.py -> build/lib/multiqc/modules/humid
2025-06-08T10:05:35,839   copying multiqc/modules/humid/neighbours.py -> build/lib/multiqc/modules/humid
2025-06-08T10:05:35,842   copying multiqc/modules/humid/stats.py -> build/lib/multiqc/modules/humid
2025-06-08T10:05:35,845   creating build/lib/multiqc/modules/interop
2025-06-08T10:05:35,846   copying multiqc/modules/interop/__init__.py -> build/lib/multiqc/modules/interop
2025-06-08T10:05:35,849   copying multiqc/modules/interop/interop.py -> build/lib/multiqc/modules/interop
2025-06-08T10:05:35,852   creating build/lib/multiqc/modules/isoseq
2025-06-08T10:05:35,853   copying multiqc/modules/isoseq/__init__.py -> build/lib/multiqc/modules/isoseq
2025-06-08T10:05:35,856   copying multiqc/modules/isoseq/isoseq.py -> build/lib/multiqc/modules/isoseq
2025-06-08T10:05:35,859   creating build/lib/multiqc/modules/ivar
2025-06-08T10:05:35,860   copying multiqc/modules/ivar/__init__.py -> build/lib/multiqc/modules/ivar
2025-06-08T10:05:35,863   copying multiqc/modules/ivar/ivar.py -> build/lib/multiqc/modules/ivar
2025-06-08T10:05:35,866   creating build/lib/multiqc/modules/jcvi
2025-06-08T10:05:35,867   copying multiqc/modules/jcvi/__init__.py -> build/lib/multiqc/modules/jcvi
2025-06-08T10:05:35,870   copying multiqc/modules/jcvi/jcvi.py -> build/lib/multiqc/modules/jcvi
2025-06-08T10:05:35,874   creating build/lib/multiqc/modules/jellyfish
2025-06-08T10:05:35,875   copying multiqc/modules/jellyfish/__init__.py -> build/lib/multiqc/modules/jellyfish
2025-06-08T10:05:35,878   copying multiqc/modules/jellyfish/jellyfish.py -> build/lib/multiqc/modules/jellyfish
2025-06-08T10:05:35,881   creating build/lib/multiqc/modules/kaiju
2025-06-08T10:05:35,882   copying multiqc/modules/kaiju/__init__.py -> build/lib/multiqc/modules/kaiju
2025-06-08T10:05:35,885   copying multiqc/modules/kaiju/kaiju.py -> build/lib/multiqc/modules/kaiju
2025-06-08T10:05:35,888   creating build/lib/multiqc/modules/kallisto
2025-06-08T10:05:35,890   copying multiqc/modules/kallisto/__init__.py -> build/lib/multiqc/modules/kallisto
2025-06-08T10:05:35,893   copying multiqc/modules/kallisto/kallisto.py -> build/lib/multiqc/modules/kallisto
2025-06-08T10:05:35,896   creating build/lib/multiqc/modules/kat
2025-06-08T10:05:35,897   copying multiqc/modules/kat/__init__.py -> build/lib/multiqc/modules/kat
2025-06-08T10:05:35,900   copying multiqc/modules/kat/kat.py -> build/lib/multiqc/modules/kat
2025-06-08T10:05:35,903   creating build/lib/multiqc/modules/kraken
2025-06-08T10:05:35,905   copying multiqc/modules/kraken/__init__.py -> build/lib/multiqc/modules/kraken
2025-06-08T10:05:35,908   copying multiqc/modules/kraken/kraken.py -> build/lib/multiqc/modules/kraken
2025-06-08T10:05:35,911   creating build/lib/multiqc/modules/leehom
2025-06-08T10:05:35,912   copying multiqc/modules/leehom/__init__.py -> build/lib/multiqc/modules/leehom
2025-06-08T10:05:35,915   copying multiqc/modules/leehom/leehom.py -> build/lib/multiqc/modules/leehom
2025-06-08T10:05:35,917   creating build/lib/multiqc/modules/librarian
2025-06-08T10:05:35,919   copying multiqc/modules/librarian/__init__.py -> build/lib/multiqc/modules/librarian
2025-06-08T10:05:35,921   copying multiqc/modules/librarian/librarian.py -> build/lib/multiqc/modules/librarian
2025-06-08T10:05:35,925   creating build/lib/multiqc/modules/lima
2025-06-08T10:05:35,926   copying multiqc/modules/lima/__init__.py -> build/lib/multiqc/modules/lima
2025-06-08T10:05:35,929   copying multiqc/modules/lima/lima.py -> build/lib/multiqc/modules/lima
2025-06-08T10:05:35,932   creating build/lib/multiqc/modules/longranger
2025-06-08T10:05:35,934   copying multiqc/modules/longranger/__init__.py -> build/lib/multiqc/modules/longranger
2025-06-08T10:05:35,937   copying multiqc/modules/longranger/longranger.py -> build/lib/multiqc/modules/longranger
2025-06-08T10:05:35,941   creating build/lib/multiqc/modules/macs2
2025-06-08T10:05:35,942   copying multiqc/modules/macs2/__init__.py -> build/lib/multiqc/modules/macs2
2025-06-08T10:05:35,945   copying multiqc/modules/macs2/macs2.py -> build/lib/multiqc/modules/macs2
2025-06-08T10:05:35,948   creating build/lib/multiqc/modules/malt
2025-06-08T10:05:35,950   copying multiqc/modules/malt/__init__.py -> build/lib/multiqc/modules/malt
2025-06-08T10:05:35,953   copying multiqc/modules/malt/malt.py -> build/lib/multiqc/modules/malt
2025-06-08T10:05:35,956   creating build/lib/multiqc/modules/mapdamage
2025-06-08T10:05:35,958   copying multiqc/modules/mapdamage/__init__.py -> build/lib/multiqc/modules/mapdamage
2025-06-08T10:05:35,960   copying multiqc/modules/mapdamage/mapdamage.py -> build/lib/multiqc/modules/mapdamage
2025-06-08T10:05:35,964   creating build/lib/multiqc/modules/megahit
2025-06-08T10:05:35,965   copying multiqc/modules/megahit/__init__.py -> build/lib/multiqc/modules/megahit
2025-06-08T10:05:35,968   copying multiqc/modules/megahit/megahit.py -> build/lib/multiqc/modules/megahit
2025-06-08T10:05:35,971   creating build/lib/multiqc/modules/metaphlan
2025-06-08T10:05:35,973   copying multiqc/modules/metaphlan/__init__.py -> build/lib/multiqc/modules/metaphlan
2025-06-08T10:05:35,975   copying multiqc/modules/metaphlan/metaphlan.py -> build/lib/multiqc/modules/metaphlan
2025-06-08T10:05:35,979   creating build/lib/multiqc/modules/methylqa
2025-06-08T10:05:35,980   copying multiqc/modules/methylqa/__init__.py -> build/lib/multiqc/modules/methylqa
2025-06-08T10:05:35,983   copying multiqc/modules/methylqa/methylqa.py -> build/lib/multiqc/modules/methylqa
2025-06-08T10:05:35,987   creating build/lib/multiqc/modules/mgikit
2025-06-08T10:05:35,988   copying multiqc/modules/mgikit/__init__.py -> build/lib/multiqc/modules/mgikit
2025-06-08T10:05:35,991   copying multiqc/modules/mgikit/mgikit.py -> build/lib/multiqc/modules/mgikit
2025-06-08T10:05:35,995   creating build/lib/multiqc/modules/minionqc
2025-06-08T10:05:35,996   copying multiqc/modules/minionqc/__init__.py -> build/lib/multiqc/modules/minionqc
2025-06-08T10:05:36,000   copying multiqc/modules/minionqc/minionqc.py -> build/lib/multiqc/modules/minionqc
2025-06-08T10:05:36,003   creating build/lib/multiqc/modules/mirtop
2025-06-08T10:05:36,004   copying multiqc/modules/mirtop/__init__.py -> build/lib/multiqc/modules/mirtop
2025-06-08T10:05:36,007   copying multiqc/modules/mirtop/mirtop.py -> build/lib/multiqc/modules/mirtop
2025-06-08T10:05:36,010   creating build/lib/multiqc/modules/mirtrace
2025-06-08T10:05:36,012   copying multiqc/modules/mirtrace/__init__.py -> build/lib/multiqc/modules/mirtrace
2025-06-08T10:05:36,014   copying multiqc/modules/mirtrace/mirtrace.py -> build/lib/multiqc/modules/mirtrace
2025-06-08T10:05:36,017   creating build/lib/multiqc/modules/mosaicatcher
2025-06-08T10:05:36,019   copying multiqc/modules/mosaicatcher/__init__.py -> build/lib/multiqc/modules/mosaicatcher
2025-06-08T10:05:36,021   copying multiqc/modules/mosaicatcher/mosaicatcher.py -> build/lib/multiqc/modules/mosaicatcher
2025-06-08T10:05:36,024   creating build/lib/multiqc/modules/mosdepth
2025-06-08T10:05:36,025   copying multiqc/modules/mosdepth/__init__.py -> build/lib/multiqc/modules/mosdepth
2025-06-08T10:05:36,028   copying multiqc/modules/mosdepth/mosdepth.py -> build/lib/multiqc/modules/mosdepth
2025-06-08T10:05:36,031   creating build/lib/multiqc/modules/motus
2025-06-08T10:05:36,032   copying multiqc/modules/motus/__init__.py -> build/lib/multiqc/modules/motus
2025-06-08T10:05:36,035   copying multiqc/modules/motus/motus.py -> build/lib/multiqc/modules/motus
2025-06-08T10:05:36,038   creating build/lib/multiqc/modules/mtnucratio
2025-06-08T10:05:36,039   copying multiqc/modules/mtnucratio/__init__.py -> build/lib/multiqc/modules/mtnucratio
2025-06-08T10:05:36,041   copying multiqc/modules/mtnucratio/mtnucratio.py -> build/lib/multiqc/modules/mtnucratio
2025-06-08T10:05:36,044   creating build/lib/multiqc/modules/multivcfanalyzer
2025-06-08T10:05:36,045   copying multiqc/modules/multivcfanalyzer/__init__.py -> build/lib/multiqc/modules/multivcfanalyzer
2025-06-08T10:05:36,047   copying multiqc/modules/multivcfanalyzer/multivcfanalyzer.py -> build/lib/multiqc/modules/multivcfanalyzer
2025-06-08T10:05:36,050   creating build/lib/multiqc/modules/nanoq
2025-06-08T10:05:36,051   copying multiqc/modules/nanoq/__init__.py -> build/lib/multiqc/modules/nanoq
2025-06-08T10:05:36,054   copying multiqc/modules/nanoq/nanoq.py -> build/lib/multiqc/modules/nanoq
2025-06-08T10:05:36,057   creating build/lib/multiqc/modules/nanostat
2025-06-08T10:05:36,058   copying multiqc/modules/nanostat/__init__.py -> build/lib/multiqc/modules/nanostat
2025-06-08T10:05:36,060   copying multiqc/modules/nanostat/nanostat.py -> build/lib/multiqc/modules/nanostat
2025-06-08T10:05:36,063   creating build/lib/multiqc/modules/nextclade
2025-06-08T10:05:36,065   copying multiqc/modules/nextclade/__init__.py -> build/lib/multiqc/modules/nextclade
2025-06-08T10:05:36,067   copying multiqc/modules/nextclade/nextclade.py -> build/lib/multiqc/modules/nextclade
2025-06-08T10:05:36,070   creating build/lib/multiqc/modules/ngsbits
2025-06-08T10:05:36,072   copying multiqc/modules/ngsbits/__init__.py -> build/lib/multiqc/modules/ngsbits
2025-06-08T10:05:36,074   copying multiqc/modules/ngsbits/mappingqc.py -> build/lib/multiqc/modules/ngsbits
2025-06-08T10:05:36,077   copying multiqc/modules/ngsbits/ngsbits.py -> build/lib/multiqc/modules/ngsbits
2025-06-08T10:05:36,079   copying multiqc/modules/ngsbits/readqc.py -> build/lib/multiqc/modules/ngsbits
2025-06-08T10:05:36,082   copying multiqc/modules/ngsbits/samplegender.py -> build/lib/multiqc/modules/ngsbits
2025-06-08T10:05:36,085   copying multiqc/modules/ngsbits/utils.py -> build/lib/multiqc/modules/ngsbits
2025-06-08T10:05:36,087   creating build/lib/multiqc/modules/ngsderive
2025-06-08T10:05:36,088   copying multiqc/modules/ngsderive/__init__.py -> build/lib/multiqc/modules/ngsderive
2025-06-08T10:05:36,091   copying multiqc/modules/ngsderive/ngsderive.py -> build/lib/multiqc/modules/ngsderive
2025-06-08T10:05:36,094   creating build/lib/multiqc/modules/nonpareil
2025-06-08T10:05:36,095   copying multiqc/modules/nonpareil/__init__.py -> build/lib/multiqc/modules/nonpareil
2025-06-08T10:05:36,097   copying multiqc/modules/nonpareil/nonpareil.py -> build/lib/multiqc/modules/nonpareil
2025-06-08T10:05:36,101   creating build/lib/multiqc/modules/odgi
2025-06-08T10:05:36,102   copying multiqc/modules/odgi/__init__.py -> build/lib/multiqc/modules/odgi
2025-06-08T10:05:36,104   copying multiqc/modules/odgi/odgi.py -> build/lib/multiqc/modules/odgi
2025-06-08T10:05:36,108   creating build/lib/multiqc/modules/optitype
2025-06-08T10:05:36,109   copying multiqc/modules/optitype/__init__.py -> build/lib/multiqc/modules/optitype
2025-06-08T10:05:36,112   copying multiqc/modules/optitype/optitype.py -> build/lib/multiqc/modules/optitype
2025-06-08T10:05:36,115   creating build/lib/multiqc/modules/pairtools
2025-06-08T10:05:36,116   copying multiqc/modules/pairtools/__init__.py -> build/lib/multiqc/modules/pairtools
2025-06-08T10:05:36,118   copying multiqc/modules/pairtools/pairtools.py -> build/lib/multiqc/modules/pairtools
2025-06-08T10:05:36,122   copying multiqc/modules/pairtools/params.yml -> build/lib/multiqc/modules/pairtools
2025-06-08T10:05:36,124   copying multiqc/modules/pairtools/utils.py -> build/lib/multiqc/modules/pairtools
2025-06-08T10:05:36,127   creating build/lib/multiqc/modules/pangolin
2025-06-08T10:05:36,128   copying multiqc/modules/pangolin/__init__.py -> build/lib/multiqc/modules/pangolin
2025-06-08T10:05:36,131   copying multiqc/modules/pangolin/pangolin.py -> build/lib/multiqc/modules/pangolin
2025-06-08T10:05:36,134   creating build/lib/multiqc/modules/pbmarkdup
2025-06-08T10:05:36,135   copying multiqc/modules/pbmarkdup/__init__.py -> build/lib/multiqc/modules/pbmarkdup
2025-06-08T10:05:36,138   copying multiqc/modules/pbmarkdup/pbmarkdup.py -> build/lib/multiqc/modules/pbmarkdup
2025-06-08T10:05:36,141   creating build/lib/multiqc/modules/peddy
2025-06-08T10:05:36,142   copying multiqc/modules/peddy/__init__.py -> build/lib/multiqc/modules/peddy
2025-06-08T10:05:36,145   copying multiqc/modules/peddy/peddy.py -> build/lib/multiqc/modules/peddy
2025-06-08T10:05:36,148   creating build/lib/multiqc/modules/percolator
2025-06-08T10:05:36,149   copying multiqc/modules/percolator/__init__.py -> build/lib/multiqc/modules/percolator
2025-06-08T10:05:36,152   copying multiqc/modules/percolator/percolator.py -> build/lib/multiqc/modules/percolator
2025-06-08T10:05:36,155   creating build/lib/multiqc/modules/phantompeakqualtools
2025-06-08T10:05:36,156   copying multiqc/modules/phantompeakqualtools/__init__.py -> build/lib/multiqc/modules/phantompeakqualtools
2025-06-08T10:05:36,159   copying multiqc/modules/phantompeakqualtools/phantompeakqualtools.py -> build/lib/multiqc/modules/phantompeakqualtools
2025-06-08T10:05:36,161   creating build/lib/multiqc/modules/picard
2025-06-08T10:05:36,163   copying multiqc/modules/picard/AlignmentSummaryMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,166   copying multiqc/modules/picard/BaseDistributionByCycleMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,169   copying multiqc/modules/picard/CrosscheckFingerprints.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,172   copying multiqc/modules/picard/ExtractIlluminaBarcodes.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,175   copying multiqc/modules/picard/GcBiasMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,178   copying multiqc/modules/picard/HsMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,181   copying multiqc/modules/picard/IlluminaBasecallingMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,184   copying multiqc/modules/picard/IlluminaLaneMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,187   copying multiqc/modules/picard/InsertSizeMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,190   copying multiqc/modules/picard/MarkDuplicates.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,194   copying multiqc/modules/picard/MarkIlluminaAdapters.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,197   copying multiqc/modules/picard/OxoGMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,199   copying multiqc/modules/picard/QualityByCycleMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,202   copying multiqc/modules/picard/QualityScoreDistributionMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,205   copying multiqc/modules/picard/QualityYieldMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,208   copying multiqc/modules/picard/RnaSeqMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,211   copying multiqc/modules/picard/RrbsSummaryMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,214   copying multiqc/modules/picard/TargetedPcrMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,217   copying multiqc/modules/picard/ValidateSamFile.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,221   copying multiqc/modules/picard/VariantCallingMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,224   copying multiqc/modules/picard/WgsMetrics.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,227   copying multiqc/modules/picard/__init__.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,230   copying multiqc/modules/picard/picard.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,233   copying multiqc/modules/picard/util.py -> build/lib/multiqc/modules/picard
2025-06-08T10:05:36,235   creating build/lib/multiqc/modules/picard/tests
2025-06-08T10:05:36,236   copying multiqc/modules/picard/tests/__init__.py -> build/lib/multiqc/modules/picard/tests
2025-06-08T10:05:36,239   copying multiqc/modules/picard/tests/test_picard.py -> build/lib/multiqc/modules/picard/tests
2025-06-08T10:05:36,242   creating build/lib/multiqc/modules/porechop
2025-06-08T10:05:36,243   copying multiqc/modules/porechop/__init__.py -> build/lib/multiqc/modules/porechop
2025-06-08T10:05:36,245   copying multiqc/modules/porechop/porechop.py -> build/lib/multiqc/modules/porechop
2025-06-08T10:05:36,249   creating build/lib/multiqc/modules/preseq
2025-06-08T10:05:36,250   copying multiqc/modules/preseq/__init__.py -> build/lib/multiqc/modules/preseq
2025-06-08T10:05:36,253   copying multiqc/modules/preseq/preseq.py -> build/lib/multiqc/modules/preseq
2025-06-08T10:05:36,256   creating build/lib/multiqc/modules/prinseqplusplus
2025-06-08T10:05:36,257   copying multiqc/modules/prinseqplusplus/__init__.py -> build/lib/multiqc/modules/prinseqplusplus
2025-06-08T10:05:36,260   copying multiqc/modules/prinseqplusplus/prinseqplusplus.py -> build/lib/multiqc/modules/prinseqplusplus
2025-06-08T10:05:36,263   creating build/lib/multiqc/modules/prokka
2025-06-08T10:05:36,264   copying multiqc/modules/prokka/__init__.py -> build/lib/multiqc/modules/prokka
2025-06-08T10:05:36,267   copying multiqc/modules/prokka/prokka.py -> build/lib/multiqc/modules/prokka
2025-06-08T10:05:36,270   creating build/lib/multiqc/modules/purple
2025-06-08T10:05:36,271   copying multiqc/modules/purple/__init__.py -> build/lib/multiqc/modules/purple
2025-06-08T10:05:36,274   copying multiqc/modules/purple/purple.py -> build/lib/multiqc/modules/purple
2025-06-08T10:05:36,277   creating build/lib/multiqc/modules/pychopper
2025-06-08T10:05:36,278   copying multiqc/modules/pychopper/__init__.py -> build/lib/multiqc/modules/pychopper
2025-06-08T10:05:36,281   copying multiqc/modules/pychopper/pychopper.py -> build/lib/multiqc/modules/pychopper
2025-06-08T10:05:36,284   creating build/lib/multiqc/modules/pycoqc
2025-06-08T10:05:36,285   copying multiqc/modules/pycoqc/__init__.py -> build/lib/multiqc/modules/pycoqc
2025-06-08T10:05:36,288   copying multiqc/modules/pycoqc/pycoqc.py -> build/lib/multiqc/modules/pycoqc
2025-06-08T10:05:36,291   creating build/lib/multiqc/modules/qc3C
2025-06-08T10:05:36,292   copying multiqc/modules/qc3C/__init__.py -> build/lib/multiqc/modules/qc3C
2025-06-08T10:05:36,295   copying multiqc/modules/qc3C/qc3C.py -> build/lib/multiqc/modules/qc3C
2025-06-08T10:05:36,299   creating build/lib/multiqc/modules/qorts
2025-06-08T10:05:36,301   copying multiqc/modules/qorts/__init__.py -> build/lib/multiqc/modules/qorts
2025-06-08T10:05:36,303   copying multiqc/modules/qorts/qorts.py -> build/lib/multiqc/modules/qorts
2025-06-08T10:05:36,307   creating build/lib/multiqc/modules/qualimap
2025-06-08T10:05:36,308   copying multiqc/modules/qualimap/QM_BamQC.py -> build/lib/multiqc/modules/qualimap
2025-06-08T10:05:36,312   copying multiqc/modules/qualimap/QM_RNASeq.py -> build/lib/multiqc/modules/qualimap
2025-06-08T10:05:36,315   copying multiqc/modules/qualimap/__init__.py -> build/lib/multiqc/modules/qualimap
2025-06-08T10:05:36,318   copying multiqc/modules/qualimap/qualimap.py -> build/lib/multiqc/modules/qualimap
2025-06-08T10:05:36,320   creating build/lib/multiqc/modules/quast
2025-06-08T10:05:36,321   copying multiqc/modules/quast/__init__.py -> build/lib/multiqc/modules/quast
2025-06-08T10:05:36,324   copying multiqc/modules/quast/quast.py -> build/lib/multiqc/modules/quast
2025-06-08T10:05:36,327   creating build/lib/multiqc/modules/rna_seqc
2025-06-08T10:05:36,328   copying multiqc/modules/rna_seqc/__init__.py -> build/lib/multiqc/modules/rna_seqc
2025-06-08T10:05:36,330   copying multiqc/modules/rna_seqc/rna_seqc.py -> build/lib/multiqc/modules/rna_seqc
2025-06-08T10:05:36,333   creating build/lib/multiqc/modules/rockhopper
2025-06-08T10:05:36,335   copying multiqc/modules/rockhopper/__init__.py -> build/lib/multiqc/modules/rockhopper
2025-06-08T10:05:36,337   copying multiqc/modules/rockhopper/rockhopper.py -> build/lib/multiqc/modules/rockhopper
2025-06-08T10:05:36,340   creating build/lib/multiqc/modules/rsem
2025-06-08T10:05:36,341   copying multiqc/modules/rsem/__init__.py -> build/lib/multiqc/modules/rsem
2025-06-08T10:05:36,344   copying multiqc/modules/rsem/rsem.py -> build/lib/multiqc/modules/rsem
2025-06-08T10:05:36,347   creating build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,348   copying multiqc/modules/rseqc/__init__.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,351   copying multiqc/modules/rseqc/bam_stat.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,354   copying multiqc/modules/rseqc/gene_body_coverage.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,357   copying multiqc/modules/rseqc/infer_experiment.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,360   copying multiqc/modules/rseqc/inner_distance.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,363   copying multiqc/modules/rseqc/junction_annotation.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,366   copying multiqc/modules/rseqc/junction_saturation.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,368   copying multiqc/modules/rseqc/read_distribution.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,371   copying multiqc/modules/rseqc/read_duplication.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,374   copying multiqc/modules/rseqc/read_gc.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,377   copying multiqc/modules/rseqc/rseqc.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,380   copying multiqc/modules/rseqc/tin.py -> build/lib/multiqc/modules/rseqc
2025-06-08T10:05:36,382   creating build/lib/multiqc/modules/salmon
2025-06-08T10:05:36,383   copying multiqc/modules/salmon/__init__.py -> build/lib/multiqc/modules/salmon
2025-06-08T10:05:36,386   copying multiqc/modules/salmon/salmon.py -> build/lib/multiqc/modules/salmon
2025-06-08T10:05:36,389   creating build/lib/multiqc/modules/sambamba
2025-06-08T10:05:36,391   copying multiqc/modules/sambamba/__init__.py -> build/lib/multiqc/modules/sambamba
2025-06-08T10:05:36,394   copying multiqc/modules/sambamba/markdup.py -> build/lib/multiqc/modules/sambamba
2025-06-08T10:05:36,397   copying multiqc/modules/sambamba/sambamba.py -> build/lib/multiqc/modules/sambamba
2025-06-08T10:05:36,399   creating build/lib/multiqc/modules/samblaster
2025-06-08T10:05:36,401   copying multiqc/modules/samblaster/__init__.py -> build/lib/multiqc/modules/samblaster
2025-06-08T10:05:36,404   copying multiqc/modules/samblaster/samblaster.py -> build/lib/multiqc/modules/samblaster
2025-06-08T10:05:36,407   creating build/lib/multiqc/modules/samtools
2025-06-08T10:05:36,408   copying multiqc/modules/samtools/__init__.py -> build/lib/multiqc/modules/samtools
2025-06-08T10:05:36,411   copying multiqc/modules/samtools/coverage.py -> build/lib/multiqc/modules/samtools
2025-06-08T10:05:36,414   copying multiqc/modules/samtools/flagstat.py -> build/lib/multiqc/modules/samtools
2025-06-08T10:05:36,418   copying multiqc/modules/samtools/idxstats.py -> build/lib/multiqc/modules/samtools
2025-06-08T10:05:36,421   copying multiqc/modules/samtools/markdup.py -> build/lib/multiqc/modules/samtools
2025-06-08T10:05:36,424   copying multiqc/modules/samtools/rmdup.py -> build/lib/multiqc/modules/samtools
2025-06-08T10:05:36,427   copying multiqc/modules/samtools/samtools.py -> build/lib/multiqc/modules/samtools
2025-06-08T10:05:36,430   copying multiqc/modules/samtools/stats.py -> build/lib/multiqc/modules/samtools
2025-06-08T10:05:36,433   creating build/lib/multiqc/modules/samtools/tests
2025-06-08T10:05:36,434   copying multiqc/modules/samtools/tests/__init__.py -> build/lib/multiqc/modules/samtools/tests
2025-06-08T10:05:36,436   copying multiqc/modules/samtools/tests/test_flagstat.py -> build/lib/multiqc/modules/samtools/tests
2025-06-08T10:05:36,438   creating build/lib/multiqc/modules/sargasso
2025-06-08T10:05:36,440   copying multiqc/modules/sargasso/__init__.py -> build/lib/multiqc/modules/sargasso
2025-06-08T10:05:36,442   copying multiqc/modules/sargasso/sargasso.py -> build/lib/multiqc/modules/sargasso
2025-06-08T10:05:36,445   creating build/lib/multiqc/modules/seqera_cli
2025-06-08T10:05:36,446   copying multiqc/modules/seqera_cli/__init__.py -> build/lib/multiqc/modules/seqera_cli
2025-06-08T10:05:36,449   copying multiqc/modules/seqera_cli/seqera_cli.py -> build/lib/multiqc/modules/seqera_cli
2025-06-08T10:05:36,452   creating build/lib/multiqc/modules/sequali
2025-06-08T10:05:36,454   copying multiqc/modules/sequali/__init__.py -> build/lib/multiqc/modules/sequali
2025-06-08T10:05:36,456   copying multiqc/modules/sequali/sequali.py -> build/lib/multiqc/modules/sequali
2025-06-08T10:05:36,460   creating build/lib/multiqc/modules/seqwho
2025-06-08T10:05:36,461   copying multiqc/modules/seqwho/__init__.py -> build/lib/multiqc/modules/seqwho
2025-06-08T10:05:36,464   copying multiqc/modules/seqwho/seqwho.py -> build/lib/multiqc/modules/seqwho
2025-06-08T10:05:36,467   creating build/lib/multiqc/modules/seqyclean
2025-06-08T10:05:36,468   copying multiqc/modules/seqyclean/__init__.py -> build/lib/multiqc/modules/seqyclean
2025-06-08T10:05:36,471   copying multiqc/modules/seqyclean/seqyclean.py -> build/lib/multiqc/modules/seqyclean
2025-06-08T10:05:36,474   creating build/lib/multiqc/modules/sexdeterrmine
2025-06-08T10:05:36,475   copying multiqc/modules/sexdeterrmine/__init__.py -> build/lib/multiqc/modules/sexdeterrmine
2025-06-08T10:05:36,478   copying multiqc/modules/sexdeterrmine/sexdeterrmine.py -> build/lib/multiqc/modules/sexdeterrmine
2025-06-08T10:05:36,482   creating build/lib/multiqc/modules/sickle
2025-06-08T10:05:36,483   copying multiqc/modules/sickle/__init__.py -> build/lib/multiqc/modules/sickle
2025-06-08T10:05:36,486   copying multiqc/modules/sickle/sickle.py -> build/lib/multiqc/modules/sickle
2025-06-08T10:05:36,489   creating build/lib/multiqc/modules/skewer
2025-06-08T10:05:36,490   copying multiqc/modules/skewer/__init__.py -> build/lib/multiqc/modules/skewer
2025-06-08T10:05:36,493   copying multiqc/modules/skewer/skewer.py -> build/lib/multiqc/modules/skewer
2025-06-08T10:05:36,496   creating build/lib/multiqc/modules/slamdunk
2025-06-08T10:05:36,497   copying multiqc/modules/slamdunk/__init__.py -> build/lib/multiqc/modules/slamdunk
2025-06-08T10:05:36,500   copying multiqc/modules/slamdunk/slamdunk.py -> build/lib/multiqc/modules/slamdunk
2025-06-08T10:05:36,504   creating build/lib/multiqc/modules/snippy
2025-06-08T10:05:36,505   copying multiqc/modules/snippy/__init__.py -> build/lib/multiqc/modules/snippy
2025-06-08T10:05:36,507   copying multiqc/modules/snippy/snippy.py -> build/lib/multiqc/modules/snippy
2025-06-08T10:05:36,510   creating build/lib/multiqc/modules/snpeff
2025-06-08T10:05:36,512   copying multiqc/modules/snpeff/__init__.py -> build/lib/multiqc/modules/snpeff
2025-06-08T10:05:36,514   copying multiqc/modules/snpeff/snpeff.py -> build/lib/multiqc/modules/snpeff
2025-06-08T10:05:36,518   creating build/lib/multiqc/modules/snpsplit
2025-06-08T10:05:36,519   copying multiqc/modules/snpsplit/__init__.py -> build/lib/multiqc/modules/snpsplit
2025-06-08T10:05:36,522   copying multiqc/modules/snpsplit/snpsplit.py -> build/lib/multiqc/modules/snpsplit
2025-06-08T10:05:36,525   creating build/lib/multiqc/modules/somalier
2025-06-08T10:05:36,526   copying multiqc/modules/somalier/__init__.py -> build/lib/multiqc/modules/somalier
2025-06-08T10:05:36,529   copying multiqc/modules/somalier/somalier.py -> build/lib/multiqc/modules/somalier
2025-06-08T10:05:36,533   creating build/lib/multiqc/modules/sortmerna
2025-06-08T10:05:36,534   copying multiqc/modules/sortmerna/__init__.py -> build/lib/multiqc/modules/sortmerna
2025-06-08T10:05:36,537   copying multiqc/modules/sortmerna/sortmerna.py -> build/lib/multiqc/modules/sortmerna
2025-06-08T10:05:36,540   creating build/lib/multiqc/modules/sourmash
2025-06-08T10:05:36,541   copying multiqc/modules/sourmash/__init__.py -> build/lib/multiqc/modules/sourmash
2025-06-08T10:05:36,544   copying multiqc/modules/sourmash/compare.py -> build/lib/multiqc/modules/sourmash
2025-06-08T10:05:36,546   copying multiqc/modules/sourmash/gather.py -> build/lib/multiqc/modules/sourmash
2025-06-08T10:05:36,549   copying multiqc/modules/sourmash/sourmash.py -> build/lib/multiqc/modules/sourmash
2025-06-08T10:05:36,552   creating build/lib/multiqc/modules/spaceranger
2025-06-08T10:05:36,553   copying multiqc/modules/spaceranger/__init__.py -> build/lib/multiqc/modules/spaceranger
2025-06-08T10:05:36,556   copying multiqc/modules/spaceranger/count.py -> build/lib/multiqc/modules/spaceranger
2025-06-08T10:05:36,559   copying multiqc/modules/spaceranger/spaceranger.py -> build/lib/multiqc/modules/spaceranger
2025-06-08T10:05:36,562   copying multiqc/modules/spaceranger/utils.py -> build/lib/multiqc/modules/spaceranger
2025-06-08T10:05:36,564   creating build/lib/multiqc/modules/stacks
2025-06-08T10:05:36,566   copying multiqc/modules/stacks/__init__.py -> build/lib/multiqc/modules/stacks
2025-06-08T10:05:36,568   copying multiqc/modules/stacks/stacks.py -> build/lib/multiqc/modules/stacks
2025-06-08T10:05:36,572   creating build/lib/multiqc/modules/star
2025-06-08T10:05:36,573   copying multiqc/modules/star/__init__.py -> build/lib/multiqc/modules/star
2025-06-08T10:05:36,576   copying multiqc/modules/star/star.py -> build/lib/multiqc/modules/star
2025-06-08T10:05:36,579   creating build/lib/multiqc/modules/supernova
2025-06-08T10:05:36,580   copying multiqc/modules/supernova/__init__.py -> build/lib/multiqc/modules/supernova
2025-06-08T10:05:36,583   copying multiqc/modules/supernova/supernova.py -> build/lib/multiqc/modules/supernova
2025-06-08T10:05:36,587   creating build/lib/multiqc/modules/telseq
2025-06-08T10:05:36,588   copying multiqc/modules/telseq/__init__.py -> build/lib/multiqc/modules/telseq
2025-06-08T10:05:36,590   copying multiqc/modules/telseq/telseq.py -> build/lib/multiqc/modules/telseq
2025-06-08T10:05:36,593   creating build/lib/multiqc/modules/theta2
2025-06-08T10:05:36,594   copying multiqc/modules/theta2/__init__.py -> build/lib/multiqc/modules/theta2
2025-06-08T10:05:36,597   copying multiqc/modules/theta2/theta2.py -> build/lib/multiqc/modules/theta2
2025-06-08T10:05:36,599   creating build/lib/multiqc/modules/tophat
2025-06-08T10:05:36,601   copying multiqc/modules/tophat/__init__.py -> build/lib/multiqc/modules/tophat
2025-06-08T10:05:36,603   copying multiqc/modules/tophat/tophat.py -> build/lib/multiqc/modules/tophat
2025-06-08T10:05:36,606   creating build/lib/multiqc/modules/trimmomatic
2025-06-08T10:05:36,607   copying multiqc/modules/trimmomatic/__init__.py -> build/lib/multiqc/modules/trimmomatic
2025-06-08T10:05:36,610   copying multiqc/modules/trimmomatic/trimmomatic.py -> build/lib/multiqc/modules/trimmomatic
2025-06-08T10:05:36,613   creating build/lib/multiqc/modules/truvari
2025-06-08T10:05:36,614   copying multiqc/modules/truvari/__init__.py -> build/lib/multiqc/modules/truvari
2025-06-08T10:05:36,617   copying multiqc/modules/truvari/truvari.py -> build/lib/multiqc/modules/truvari
2025-06-08T10:05:36,620   creating build/lib/multiqc/modules/umicollapse
2025-06-08T10:05:36,621   copying multiqc/modules/umicollapse/__init__.py -> build/lib/multiqc/modules/umicollapse
2025-06-08T10:05:36,624   copying multiqc/modules/umicollapse/umicollapse.py -> build/lib/multiqc/modules/umicollapse
2025-06-08T10:05:36,627   creating build/lib/multiqc/modules/umicollapse/tests
2025-06-08T10:05:36,628   copying multiqc/modules/umicollapse/tests/__init__.py -> build/lib/multiqc/modules/umicollapse/tests
2025-06-08T10:05:36,631   copying multiqc/modules/umicollapse/tests/test_umicollapse.py -> build/lib/multiqc/modules/umicollapse/tests
2025-06-08T10:05:36,633   creating build/lib/multiqc/modules/umitools
2025-06-08T10:05:36,634   copying multiqc/modules/umitools/__init__.py -> build/lib/multiqc/modules/umitools
2025-06-08T10:05:36,637   copying multiqc/modules/umitools/umitools.py -> build/lib/multiqc/modules/umitools
2025-06-08T10:05:36,640   creating build/lib/multiqc/modules/umitools/tests
2025-06-08T10:05:36,642   copying multiqc/modules/umitools/tests/__init__.py -> build/lib/multiqc/modules/umitools/tests
2025-06-08T10:05:36,644   copying multiqc/modules/umitools/tests/test_umitools.py -> build/lib/multiqc/modules/umitools/tests
2025-06-08T10:05:36,646   creating build/lib/multiqc/modules/varscan2
2025-06-08T10:05:36,648   copying multiqc/modules/varscan2/__init__.py -> build/lib/multiqc/modules/varscan2
2025-06-08T10:05:36,650   copying multiqc/modules/varscan2/varscan2.py -> build/lib/multiqc/modules/varscan2
2025-06-08T10:05:36,653   creating build/lib/multiqc/modules/vcftools
2025-06-08T10:05:36,654   copying multiqc/modules/vcftools/__init__.py -> build/lib/multiqc/modules/vcftools
2025-06-08T10:05:36,657   copying multiqc/modules/vcftools/relatedness2.py -> build/lib/multiqc/modules/vcftools
2025-06-08T10:05:36,660   copying multiqc/modules/vcftools/tstv_by_count.py -> build/lib/multiqc/modules/vcftools
2025-06-08T10:05:36,663   copying multiqc/modules/vcftools/tstv_by_qual.py -> build/lib/multiqc/modules/vcftools
2025-06-08T10:05:36,665   copying multiqc/modules/vcftools/tstv_summary.py -> build/lib/multiqc/modules/vcftools
2025-06-08T10:05:36,668   copying multiqc/modules/vcftools/vcftools.py -> build/lib/multiqc/modules/vcftools
2025-06-08T10:05:36,671   creating build/lib/multiqc/modules/vep
2025-06-08T10:05:36,672   copying multiqc/modules/vep/__init__.py -> build/lib/multiqc/modules/vep
2025-06-08T10:05:36,675   copying multiqc/modules/vep/vep.py -> build/lib/multiqc/modules/vep
2025-06-08T10:05:36,678   creating build/lib/multiqc/modules/verifybamid
2025-06-08T10:05:36,679   copying multiqc/modules/verifybamid/__init__.py -> build/lib/multiqc/modules/verifybamid
2025-06-08T10:05:36,682   copying multiqc/modules/verifybamid/verifybamid.py -> build/lib/multiqc/modules/verifybamid
2025-06-08T10:05:36,686   creating build/lib/multiqc/modules/vg
2025-06-08T10:05:36,687   copying multiqc/modules/vg/__init__.py -> build/lib/multiqc/modules/vg
2025-06-08T10:05:36,689   copying multiqc/modules/vg/vg.py -> build/lib/multiqc/modules/vg
2025-06-08T10:05:36,693   creating build/lib/multiqc/modules/whatshap
2025-06-08T10:05:36,694   copying multiqc/modules/whatshap/__init__.py -> build/lib/multiqc/modules/whatshap
2025-06-08T10:05:36,697   copying multiqc/modules/whatshap/whatshap.py -> build/lib/multiqc/modules/whatshap
2025-06-08T10:05:36,700   creating build/lib/multiqc/modules/xengsort
2025-06-08T10:05:36,701   copying multiqc/modules/xengsort/__init__.py -> build/lib/multiqc/modules/xengsort
2025-06-08T10:05:36,704   copying multiqc/modules/xengsort/xengsort.py -> build/lib/multiqc/modules/xengsort
2025-06-08T10:05:36,707   creating build/lib/multiqc/modules/xenome
2025-06-08T10:05:36,708   copying multiqc/modules/xenome/__init__.py -> build/lib/multiqc/modules/xenome
2025-06-08T10:05:36,711   copying multiqc/modules/xenome/xenome.py -> build/lib/multiqc/modules/xenome
2025-06-08T10:05:36,714   creating build/lib/multiqc/plots
2025-06-08T10:05:36,715   copying multiqc/plots/__init__.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,718   copying multiqc/plots/bargraph.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,722   copying multiqc/plots/box.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,725   copying multiqc/plots/heatmap.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,728   copying multiqc/plots/linegraph.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,732   copying multiqc/plots/plot.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,736   copying multiqc/plots/scatter.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,740   copying multiqc/plots/table.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,743   copying multiqc/plots/table_object.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,747   copying multiqc/plots/utils.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,751   copying multiqc/plots/violin.py -> build/lib/multiqc/plots
2025-06-08T10:05:36,756   creating build/lib/multiqc/templates
2025-06-08T10:05:36,757   copying multiqc/templates/__init__.py -> build/lib/multiqc/templates
2025-06-08T10:05:36,760   creating build/lib/multiqc/templates/default
2025-06-08T10:05:36,762   copying multiqc/templates/default/__init__.py -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,766   copying multiqc/templates/default/base.html -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,769   copying multiqc/templates/default/content.html -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,772   copying multiqc/templates/default/foot.html -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,775   copying multiqc/templates/default/footer.html -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,778   copying multiqc/templates/default/general_stats.html -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,781   copying multiqc/templates/default/head.html -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,784   copying multiqc/templates/default/header.html -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,788   copying multiqc/templates/default/includes.html -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,791   copying multiqc/templates/default/nav.html -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,795   copying multiqc/templates/default/toolbox.html -> build/lib/multiqc/templates/default
2025-06-08T10:05:36,798   creating build/lib/multiqc/templates/default/assets/css
2025-06-08T10:05:36,800   copying multiqc/templates/default/assets/css/bootstrap.min.css -> build/lib/multiqc/templates/default/assets/css
2025-06-08T10:05:36,806   copying multiqc/templates/default/assets/css/default_multiqc.css -> build/lib/multiqc/templates/default/assets/css
2025-06-08T10:05:36,810   copying multiqc/templates/default/assets/css/jquery.toast.css -> build/lib/multiqc/templates/default/assets/css
2025-06-08T10:05:36,813   creating build/lib/multiqc/templates/default/assets/fonts
2025-06-08T10:05:36,815   copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.eot -> build/lib/multiqc/templates/default/assets/fonts
2025-06-08T10:05:36,819   copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.svg -> build/lib/multiqc/templates/default/assets/fonts
2025-06-08T10:05:36,825   copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.ttf -> build/lib/multiqc/templates/default/assets/fonts
2025-06-08T10:05:36,829   copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff -> build/lib/multiqc/templates/default/assets/fonts
2025-06-08T10:05:36,832   copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff2 -> build/lib/multiqc/templates/default/assets/fonts
2025-06-08T10:05:36,836   creating build/lib/multiqc/templates/default/assets/img
2025-06-08T10:05:36,838   copying multiqc/templates/default/assets/img/MultiQC_logo.png -> build/lib/multiqc/templates/default/assets/img
2025-06-08T10:05:36,841   copying multiqc/templates/default/assets/img/MultiQC_logo_dark.svg -> build/lib/multiqc/templates/default/assets/img
2025-06-08T10:05:36,845   copying multiqc/templates/default/assets/img/favicon-16x16.png -> build/lib/multiqc/templates/default/assets/img
2025-06-08T10:05:36,848   copying multiqc/templates/default/assets/img/favicon-32x32.png -> build/lib/multiqc/templates/default/assets/img
2025-06-08T10:05:36,851   copying multiqc/templates/default/assets/img/favicon-96x96.png -> build/lib/multiqc/templates/default/assets/img
2025-06-08T10:05:36,854   copying multiqc/templates/default/assets/img/seqera_logo.png -> build/lib/multiqc/templates/default/assets/img
2025-06-08T10:05:36,857   copying multiqc/templates/default/assets/img/seqera_logo_mono.png -> build/lib/multiqc/templates/default/assets/img
2025-06-08T10:05:36,860   creating build/lib/multiqc/templates/default/assets/js
2025-06-08T10:05:36,861   copying multiqc/templates/default/assets/js/ai-helpers.js -> build/lib/multiqc/templates/default/assets/js
2025-06-08T10:05:36,865   copying multiqc/templates/default/assets/js/ai.js -> build/lib/multiqc/templates/default/assets/js
2025-06-08T10:05:36,868   copying multiqc/templates/default/assets/js/decompress.js -> build/lib/multiqc/templates/default/assets/js
2025-06-08T10:05:36,871   copying multiqc/templates/default/assets/js/flat.js -> build/lib/multiqc/templates/default/assets/js
2025-06-08T10:05:36,874   copying multiqc/templates/default/assets/js/multiqc.js -> build/lib/multiqc/templates/default/assets/js
2025-06-08T10:05:36,877   copying multiqc/templates/default/assets/js/plotting.js -> build/lib/multiqc/templates/default/assets/js
2025-06-08T10:05:36,880   copying multiqc/templates/default/assets/js/render.js -> build/lib/multiqc/templates/default/assets/js
2025-06-08T10:05:36,883   copying multiqc/templates/default/assets/js/tables.js -> build/lib/multiqc/templates/default/assets/js
2025-06-08T10:05:36,887   copying multiqc/templates/default/assets/js/toolbox.js -> build/lib/multiqc/templates/default/assets/js
2025-06-08T10:05:36,892   creating build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:36,894   copying multiqc/templates/default/assets/js/packages/FileSaver.min.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:36,896   copying multiqc/templates/default/assets/js/packages/bootstrap.min.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:36,900   copying multiqc/templates/default/assets/js/packages/jquery-3.1.1.min.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:36,905   copying multiqc/templates/default/assets/js/packages/jquery-ui.min.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:36,908   copying multiqc/templates/default/assets/js/packages/jquery.tablesorter.min.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:36,913   copying multiqc/templates/default/assets/js/packages/jquery.toast.min.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:36,916   copying multiqc/templates/default/assets/js/packages/jszip.min.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:36,923   copying multiqc/templates/default/assets/js/packages/pako_inflate.min.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:36,926   copying multiqc/templates/default/assets/js/packages/plotly-2.27.0.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:37,059   copying multiqc/templates/default/assets/js/packages/plotly-2.27.0.min.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:37,119   copying multiqc/templates/default/assets/js/packages/showdown.min.js -> build/lib/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:37,123   creating build/lib/multiqc/templates/default/assets/js/plots
2025-06-08T10:05:37,124   copying multiqc/templates/default/assets/js/plots/bar.js -> build/lib/multiqc/templates/default/assets/js/plots
2025-06-08T10:05:37,127   copying multiqc/templates/default/assets/js/plots/box.js -> build/lib/multiqc/templates/default/assets/js/plots
2025-06-08T10:05:37,130   copying multiqc/templates/default/assets/js/plots/heatmap.js -> build/lib/multiqc/templates/default/assets/js/plots
2025-06-08T10:05:37,133   copying multiqc/templates/default/assets/js/plots/line.js -> build/lib/multiqc/templates/default/assets/js/plots
2025-06-08T10:05:37,136   copying multiqc/templates/default/assets/js/plots/scatter.js -> build/lib/multiqc/templates/default/assets/js/plots
2025-06-08T10:05:37,139   copying multiqc/templates/default/assets/js/plots/violin.js -> build/lib/multiqc/templates/default/assets/js/plots
2025-06-08T10:05:37,143   creating build/lib/multiqc/templates/gathered
2025-06-08T10:05:37,144   copying multiqc/templates/gathered/__init__.py -> build/lib/multiqc/templates/gathered
2025-06-08T10:05:37,146   copying multiqc/templates/gathered/content.html -> build/lib/multiqc/templates/gathered
2025-06-08T10:05:37,150   copying multiqc/templates/gathered/nav.html -> build/lib/multiqc/templates/gathered
2025-06-08T10:05:37,153   creating build/lib/multiqc/templates/geo
2025-06-08T10:05:37,154   copying multiqc/templates/geo/__init__.py -> build/lib/multiqc/templates/geo
2025-06-08T10:05:37,157   copying multiqc/templates/geo/includes.html -> build/lib/multiqc/templates/geo
2025-06-08T10:05:37,160   creating build/lib/multiqc/templates/geo/assets/css
2025-06-08T10:05:37,162   copying multiqc/templates/geo/assets/css/bootstrap.min.css -> build/lib/multiqc/templates/geo/assets/css
2025-06-08T10:05:37,168   creating build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,169   copying multiqc/templates/geo/assets/img/emailme.gif -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,172   copying multiqc/templates/geo/assets/img/flames.gif -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,176   copying multiqc/templates/geo/assets/img/glyphicons-halflings-white.png -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,180   copying multiqc/templates/geo/assets/img/glyphicons-halflings.png -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,183   copying multiqc/templates/geo/assets/img/hot.gif -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,187   copying multiqc/templates/geo/assets/img/mchammer.gif -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,191   copying multiqc/templates/geo/assets/img/microfab.gif -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,195   copying multiqc/templates/geo/assets/img/new.gif -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,197   copying multiqc/templates/geo/assets/img/new2.gif -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,200   copying multiqc/templates/geo/assets/img/progress.gif -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,203   copying multiqc/templates/geo/assets/img/rainbow.gif -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,206   copying multiqc/templates/geo/assets/img/stars.gif -> build/lib/multiqc/templates/geo/assets/img
2025-06-08T10:05:37,209   creating build/lib/multiqc/templates/sections
2025-06-08T10:05:37,210   copying multiqc/templates/sections/__init__.py -> build/lib/multiqc/templates/sections
2025-06-08T10:05:37,213   copying multiqc/templates/sections/content.html -> build/lib/multiqc/templates/sections
2025-06-08T10:05:37,215   creating build/lib/multiqc/templates/simple
2025-06-08T10:05:37,217   copying multiqc/templates/simple/__init__.py -> build/lib/multiqc/templates/simple
2025-06-08T10:05:37,219   copying multiqc/templates/simple/foot.html -> build/lib/multiqc/templates/simple
2025-06-08T10:05:37,222   copying multiqc/templates/simple/footer.html -> build/lib/multiqc/templates/simple
2025-06-08T10:05:37,225   copying multiqc/templates/simple/header.html -> build/lib/multiqc/templates/simple
2025-06-08T10:05:37,228   copying multiqc/templates/simple/includes.html -> build/lib/multiqc/templates/simple
2025-06-08T10:05:37,230   copying multiqc/templates/simple/nav.html -> build/lib/multiqc/templates/simple
2025-06-08T10:05:37,233   copying multiqc/templates/simple/toolbox.html -> build/lib/multiqc/templates/simple
2025-06-08T10:05:37,236   creating build/lib/multiqc/utils
2025-06-08T10:05:37,237   copying multiqc/utils/config.py -> build/lib/multiqc/utils
2025-06-08T10:05:37,239   copying multiqc/utils/config_schema.json -> build/lib/multiqc/utils
2025-06-08T10:05:37,243   copying multiqc/utils/config_schema.py -> build/lib/multiqc/utils
2025-06-08T10:05:37,247   copying multiqc/utils/megaqc.py -> build/lib/multiqc/utils
2025-06-08T10:05:37,249   copying multiqc/utils/mqc_colour.py -> build/lib/multiqc/utils
2025-06-08T10:05:37,253   copying multiqc/utils/pyaml_env.py -> build/lib/multiqc/utils
2025-06-08T10:05:37,256   copying multiqc/utils/report.py -> build/lib/multiqc/utils
2025-06-08T10:05:37,259   copying multiqc/utils/testing.py -> build/lib/multiqc/utils
2025-06-08T10:05:37,262   copying multiqc/utils/util_functions.py -> build/lib/multiqc/utils
2025-06-08T10:05:37,280   installing to build/bdist.linux-armv7l/wheel
2025-06-08T10:05:37,281   running install
2025-06-08T10:05:37,307   running install_lib
2025-06-08T10:05:37,313   creating build/bdist.linux-armv7l/wheel
2025-06-08T10:05:37,315   creating build/bdist.linux-armv7l/wheel/multiqc
2025-06-08T10:05:37,320   creating build/bdist.linux-armv7l/wheel/multiqc/modules
2025-06-08T10:05:37,322   creating build/bdist.linux-armv7l/wheel/multiqc/modules/snippy
2025-06-08T10:05:37,323   copying build/lib/multiqc/modules/snippy/snippy.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/snippy
2025-06-08T10:05:37,326   copying build/lib/multiqc/modules/snippy/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/snippy
2025-06-08T10:05:37,329   creating build/bdist.linux-armv7l/wheel/multiqc/modules/telseq
2025-06-08T10:05:37,330   copying build/lib/multiqc/modules/telseq/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/telseq
2025-06-08T10:05:37,332   copying build/lib/multiqc/modules/telseq/telseq.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/telseq
2025-06-08T10:05:37,335   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap
2025-06-08T10:05:37,336   copying build/lib/multiqc/modules/bbmap/plot_covhist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,338   copying build/lib/multiqc/modules/bbmap/plot_qchist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,340   copying build/lib/multiqc/modules/bbmap/plot_qahist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,342   copying build/lib/multiqc/modules/bbmap/plot_ihist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,344   copying build/lib/multiqc/modules/bbmap/plot_bqhist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,346   copying build/lib/multiqc/modules/bbmap/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,349   copying build/lib/multiqc/modules/bbmap/plot_idhist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,351   copying build/lib/multiqc/modules/bbmap/bbmap_filetypes.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,354   copying build/lib/multiqc/modules/bbmap/plot_basic_hist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,356   copying build/lib/multiqc/modules/bbmap/plot_bhist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,358   copying build/lib/multiqc/modules/bbmap/plot_mhist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,360   copying build/lib/multiqc/modules/bbmap/bbmap.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,363   copying build/lib/multiqc/modules/bbmap/plot_aqhist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,365   copying build/lib/multiqc/modules/bbmap/plot_qhist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,367   copying build/lib/multiqc/modules/bbmap/plot_indelhist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbmap
2025-06-08T10:05:37,370   creating build/bdist.linux-armv7l/wheel/multiqc/modules/rsem
2025-06-08T10:05:37,371   copying build/lib/multiqc/modules/rsem/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rsem
2025-06-08T10:05:37,373   copying build/lib/multiqc/modules/rsem/rsem.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rsem
2025-06-08T10:05:37,376   creating build/bdist.linux-armv7l/wheel/multiqc/modules/xengsort
2025-06-08T10:05:37,377   copying build/lib/multiqc/modules/xengsort/xengsort.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/xengsort
2025-06-08T10:05:37,380   copying build/lib/multiqc/modules/xengsort/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/xengsort
2025-06-08T10:05:37,382   creating build/bdist.linux-armv7l/wheel/multiqc/modules/ccs
2025-06-08T10:05:37,383   copying build/lib/multiqc/modules/ccs/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ccs
2025-06-08T10:05:37,385   copying build/lib/multiqc/modules/ccs/ccs.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ccs
2025-06-08T10:05:37,388   creating build/bdist.linux-armv7l/wheel/multiqc/modules/ccs/tests
2025-06-08T10:05:37,389   copying build/lib/multiqc/modules/ccs/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ccs/tests
2025-06-08T10:05:37,391   copying build/lib/multiqc/modules/ccs/tests/test_ccs.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ccs/tests
2025-06-08T10:05:37,393   creating build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger
2025-06-08T10:05:37,395   copying build/lib/multiqc/modules/spaceranger/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/spaceranger
2025-06-08T10:05:37,396   copying build/lib/multiqc/modules/spaceranger/utils.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/spaceranger
2025-06-08T10:05:37,399   copying build/lib/multiqc/modules/spaceranger/count.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/spaceranger
2025-06-08T10:05:37,402   copying build/lib/multiqc/modules/spaceranger/spaceranger.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/spaceranger
2025-06-08T10:05:37,404   creating build/bdist.linux-armv7l/wheel/multiqc/modules/umicollapse
2025-06-08T10:05:37,405   copying build/lib/multiqc/modules/umicollapse/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/umicollapse
2025-06-08T10:05:37,408   creating build/bdist.linux-armv7l/wheel/multiqc/modules/umicollapse/tests
2025-06-08T10:05:37,410   copying build/lib/multiqc/modules/umicollapse/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/umicollapse/tests
2025-06-08T10:05:37,411   copying build/lib/multiqc/modules/umicollapse/tests/test_umicollapse.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/umicollapse/tests
2025-06-08T10:05:37,414   copying build/lib/multiqc/modules/umicollapse/umicollapse.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/umicollapse
2025-06-08T10:05:37,417   creating build/bdist.linux-armv7l/wheel/multiqc/modules/purple
2025-06-08T10:05:37,418   copying build/lib/multiqc/modules/purple/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/purple
2025-06-08T10:05:37,420   copying build/lib/multiqc/modules/purple/purple.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/purple
2025-06-08T10:05:37,424   creating build/bdist.linux-armv7l/wheel/multiqc/modules/picard
2025-06-08T10:05:37,425   copying build/lib/multiqc/modules/picard/MarkDuplicates.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,428   copying build/lib/multiqc/modules/picard/MarkIlluminaAdapters.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,430   copying build/lib/multiqc/modules/picard/QualityByCycleMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,432   copying build/lib/multiqc/modules/picard/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,434   copying build/lib/multiqc/modules/picard/WgsMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,437   copying build/lib/multiqc/modules/picard/RnaSeqMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,440   copying build/lib/multiqc/modules/picard/InsertSizeMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,442   copying build/lib/multiqc/modules/picard/IlluminaBasecallingMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,445   copying build/lib/multiqc/modules/picard/QualityYieldMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,447   copying build/lib/multiqc/modules/picard/HsMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,450   copying build/lib/multiqc/modules/picard/VariantCallingMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,453   copying build/lib/multiqc/modules/picard/BaseDistributionByCycleMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,455   copying build/lib/multiqc/modules/picard/QualityScoreDistributionMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,457   copying build/lib/multiqc/modules/picard/ExtractIlluminaBarcodes.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,460   copying build/lib/multiqc/modules/picard/util.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,463   creating build/bdist.linux-armv7l/wheel/multiqc/modules/picard/tests
2025-06-08T10:05:37,464   copying build/lib/multiqc/modules/picard/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard/tests
2025-06-08T10:05:37,466   copying build/lib/multiqc/modules/picard/tests/test_picard.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard/tests
2025-06-08T10:05:37,468   copying build/lib/multiqc/modules/picard/TargetedPcrMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,471   copying build/lib/multiqc/modules/picard/CrosscheckFingerprints.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,474   copying build/lib/multiqc/modules/picard/GcBiasMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,477   copying build/lib/multiqc/modules/picard/AlignmentSummaryMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,480   copying build/lib/multiqc/modules/picard/picard.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,482   copying build/lib/multiqc/modules/picard/OxoGMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,485   copying build/lib/multiqc/modules/picard/RrbsSummaryMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,488   copying build/lib/multiqc/modules/picard/IlluminaLaneMetrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,490   copying build/lib/multiqc/modules/picard/ValidateSamFile.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/picard
2025-06-08T10:05:37,494   creating build/bdist.linux-armv7l/wheel/multiqc/modules/ganon
2025-06-08T10:05:37,495   copying build/lib/multiqc/modules/ganon/ganon.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ganon
2025-06-08T10:05:37,498   copying build/lib/multiqc/modules/ganon/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ganon
2025-06-08T10:05:37,501   creating build/bdist.linux-armv7l/wheel/multiqc/modules/mosaicatcher
2025-06-08T10:05:37,503   copying build/lib/multiqc/modules/mosaicatcher/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mosaicatcher
2025-06-08T10:05:37,505   copying build/lib/multiqc/modules/mosaicatcher/mosaicatcher.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mosaicatcher
2025-06-08T10:05:37,508   creating build/bdist.linux-armv7l/wheel/multiqc/modules/gatk
2025-06-08T10:05:37,510   copying build/lib/multiqc/modules/gatk/base_recalibrator.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gatk
2025-06-08T10:05:37,512   copying build/lib/multiqc/modules/gatk/gatk.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gatk
2025-06-08T10:05:37,515   copying build/lib/multiqc/modules/gatk/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gatk
2025-06-08T10:05:37,517   copying build/lib/multiqc/modules/gatk/utils.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gatk
2025-06-08T10:05:37,519   copying build/lib/multiqc/modules/gatk/analyze_saturation_mutagenesis.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gatk
2025-06-08T10:05:37,522   copying build/lib/multiqc/modules/gatk/varianteval.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gatk
2025-06-08T10:05:37,525   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bismark
2025-06-08T10:05:37,526   copying build/lib/multiqc/modules/bismark/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bismark
2025-06-08T10:05:37,528   copying build/lib/multiqc/modules/bismark/bismark.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bismark
2025-06-08T10:05:37,531   creating build/bdist.linux-armv7l/wheel/multiqc/modules/eigenstratdatabasetools
2025-06-08T10:05:37,533   copying build/lib/multiqc/modules/eigenstratdatabasetools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/eigenstratdatabasetools
2025-06-08T10:05:37,535   copying build/lib/multiqc/modules/eigenstratdatabasetools/eigenstratdatabasetools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/eigenstratdatabasetools
2025-06-08T10:05:37,539   creating build/bdist.linux-armv7l/wheel/multiqc/modules/cells2stats
2025-06-08T10:05:37,540   copying build/lib/multiqc/modules/cells2stats/cells2stats.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cells2stats
2025-06-08T10:05:37,542   copying build/lib/multiqc/modules/cells2stats/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cells2stats
2025-06-08T10:05:37,545   copying build/lib/multiqc/modules/cells2stats/utils.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cells2stats
2025-06-08T10:05:37,547   copying build/lib/multiqc/modules/cells2stats/cells2stats_tables.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cells2stats
2025-06-08T10:05:37,550   copying build/lib/multiqc/modules/cells2stats/cells2stats_bar_plots.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cells2stats
2025-06-08T10:05:37,553   copying build/lib/multiqc/modules/cells2stats/queries.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cells2stats
2025-06-08T10:05:37,556   creating build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap
2025-06-08T10:05:37,558   copying build/lib/multiqc/modules/qualimap/QM_BamQC.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/qualimap
2025-06-08T10:05:37,561   copying build/lib/multiqc/modules/qualimap/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/qualimap
2025-06-08T10:05:37,564   copying build/lib/multiqc/modules/qualimap/qualimap.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/qualimap
2025-06-08T10:05:37,566   copying build/lib/multiqc/modules/qualimap/QM_RNASeq.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/qualimap
2025-06-08T10:05:37,570   creating build/bdist.linux-armv7l/wheel/multiqc/modules/prinseqplusplus
2025-06-08T10:05:37,571   copying build/lib/multiqc/modules/prinseqplusplus/prinseqplusplus.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/prinseqplusplus
2025-06-08T10:05:37,574   copying build/lib/multiqc/modules/prinseqplusplus/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/prinseqplusplus
2025-06-08T10:05:37,577   creating build/bdist.linux-armv7l/wheel/multiqc/modules/dedup
2025-06-08T10:05:37,578   copying build/lib/multiqc/modules/dedup/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dedup
2025-06-08T10:05:37,581   copying build/lib/multiqc/modules/dedup/dedup.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dedup
2025-06-08T10:05:37,584   creating build/bdist.linux-armv7l/wheel/multiqc/modules/megahit
2025-06-08T10:05:37,585   copying build/lib/multiqc/modules/megahit/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/megahit
2025-06-08T10:05:37,587   copying build/lib/multiqc/modules/megahit/megahit.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/megahit
2025-06-08T10:05:37,591   creating build/bdist.linux-armv7l/wheel/multiqc/modules/star
2025-06-08T10:05:37,592   copying build/lib/multiqc/modules/star/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/star
2025-06-08T10:05:37,594   copying build/lib/multiqc/modules/star/star.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/star
2025-06-08T10:05:37,598   creating build/bdist.linux-armv7l/wheel/multiqc/modules/ataqv
2025-06-08T10:05:37,599   copying build/lib/multiqc/modules/ataqv/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ataqv
2025-06-08T10:05:37,602   copying build/lib/multiqc/modules/ataqv/ataqv.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ataqv
2025-06-08T10:05:37,605   creating build/bdist.linux-armv7l/wheel/multiqc/modules/filtlong
2025-06-08T10:05:37,607   copying build/lib/multiqc/modules/filtlong/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/filtlong
2025-06-08T10:05:37,609   copying build/lib/multiqc/modules/filtlong/filtlong.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/filtlong
2025-06-08T10:05:37,612   creating build/bdist.linux-armv7l/wheel/multiqc/modules/minionqc
2025-06-08T10:05:37,613   copying build/lib/multiqc/modules/minionqc/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/minionqc
2025-06-08T10:05:37,616   copying build/lib/multiqc/modules/minionqc/minionqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/minionqc
2025-06-08T10:05:37,619   creating build/bdist.linux-armv7l/wheel/multiqc/modules/vep
2025-06-08T10:05:37,621   copying build/lib/multiqc/modules/vep/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/vep
2025-06-08T10:05:37,623   copying build/lib/multiqc/modules/vep/vep.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/vep
2025-06-08T10:05:37,626   creating build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger
2025-06-08T10:05:37,628   copying build/lib/multiqc/modules/cellranger/cellranger.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cellranger
2025-06-08T10:05:37,630   copying build/lib/multiqc/modules/cellranger/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cellranger
2025-06-08T10:05:37,632   copying build/lib/multiqc/modules/cellranger/utils.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cellranger
2025-06-08T10:05:37,635   copying build/lib/multiqc/modules/cellranger/count.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cellranger
2025-06-08T10:05:37,638   copying build/lib/multiqc/modules/cellranger/vdj.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cellranger
2025-06-08T10:05:37,641   creating build/bdist.linux-armv7l/wheel/multiqc/modules/glimpse
2025-06-08T10:05:37,643   copying build/lib/multiqc/modules/glimpse/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/glimpse
2025-06-08T10:05:37,645   copying build/lib/multiqc/modules/glimpse/err_spl.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/glimpse
2025-06-08T10:05:37,648   copying build/lib/multiqc/modules/glimpse/glimpse.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/glimpse
2025-06-08T10:05:37,650   copying build/lib/multiqc/modules/glimpse/err_grp.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/glimpse
2025-06-08T10:05:37,654   creating build/bdist.linux-armv7l/wheel/multiqc/modules/motus
2025-06-08T10:05:37,655   copying build/lib/multiqc/modules/motus/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/motus
2025-06-08T10:05:37,658   copying build/lib/multiqc/modules/motus/motus.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/motus
2025-06-08T10:05:37,661   creating build/bdist.linux-armv7l/wheel/multiqc/modules/freyja
2025-06-08T10:05:37,662   copying build/lib/multiqc/modules/freyja/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/freyja
2025-06-08T10:05:37,664   copying build/lib/multiqc/modules/freyja/freyja.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/freyja
2025-06-08T10:05:37,667   creating build/bdist.linux-armv7l/wheel/multiqc/modules/checkm
2025-06-08T10:05:37,669   copying build/lib/multiqc/modules/checkm/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/checkm
2025-06-08T10:05:37,671   copying build/lib/multiqc/modules/checkm/checkm.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/checkm
2025-06-08T10:05:37,674   creating build/bdist.linux-armv7l/wheel/multiqc/modules/samblaster
2025-06-08T10:05:37,675   copying build/lib/multiqc/modules/samblaster/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samblaster
2025-06-08T10:05:37,677   copying build/lib/multiqc/modules/samblaster/samblaster.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samblaster
2025-06-08T10:05:37,680   creating build/bdist.linux-armv7l/wheel/multiqc/modules/htseq
2025-06-08T10:05:37,681   copying build/lib/multiqc/modules/htseq/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/htseq
2025-06-08T10:05:37,684   copying build/lib/multiqc/modules/htseq/htseq.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/htseq
2025-06-08T10:05:37,687   creating build/bdist.linux-armv7l/wheel/multiqc/modules/truvari
2025-06-08T10:05:37,688   copying build/lib/multiqc/modules/truvari/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/truvari
2025-06-08T10:05:37,690   copying build/lib/multiqc/modules/truvari/truvari.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/truvari
2025-06-08T10:05:37,694   creating build/bdist.linux-armv7l/wheel/multiqc/modules/kraken
2025-06-08T10:05:37,695   copying build/lib/multiqc/modules/kraken/kraken.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/kraken
2025-06-08T10:05:37,699   copying build/lib/multiqc/modules/kraken/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/kraken
2025-06-08T10:05:37,701   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bakta
2025-06-08T10:05:37,703   copying build/lib/multiqc/modules/bakta/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bakta
2025-06-08T10:05:37,705   copying build/lib/multiqc/modules/bakta/bakta.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bakta
2025-06-08T10:05:37,708   creating build/bdist.linux-armv7l/wheel/multiqc/modules/nanostat
2025-06-08T10:05:37,709   copying build/lib/multiqc/modules/nanostat/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/nanostat
2025-06-08T10:05:37,712   copying build/lib/multiqc/modules/nanostat/nanostat.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/nanostat
2025-06-08T10:05:37,716   creating build/bdist.linux-armv7l/wheel/multiqc/modules/preseq
2025-06-08T10:05:37,717   copying build/lib/multiqc/modules/preseq/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/preseq
2025-06-08T10:05:37,719   copying build/lib/multiqc/modules/preseq/preseq.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/preseq
2025-06-08T10:05:37,723   creating build/bdist.linux-armv7l/wheel/multiqc/modules/humid
2025-06-08T10:05:37,724   copying build/lib/multiqc/modules/humid/clusters.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/humid
2025-06-08T10:05:37,727   copying build/lib/multiqc/modules/humid/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/humid
2025-06-08T10:05:37,729   copying build/lib/multiqc/modules/humid/neighbours.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/humid
2025-06-08T10:05:37,731   copying build/lib/multiqc/modules/humid/stats.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/humid
2025-06-08T10:05:37,734   copying build/lib/multiqc/modules/humid/counts.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/humid
2025-06-08T10:05:37,736   copying build/lib/multiqc/modules/humid/humid.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/humid
2025-06-08T10:05:37,739   creating build/bdist.linux-armv7l/wheel/multiqc/modules/metaphlan
2025-06-08T10:05:37,740   copying build/lib/multiqc/modules/metaphlan/metaphlan.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/metaphlan
2025-06-08T10:05:37,743   copying build/lib/multiqc/modules/metaphlan/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/metaphlan
2025-06-08T10:05:37,746   creating build/bdist.linux-armv7l/wheel/multiqc/modules/sexdeterrmine
2025-06-08T10:05:37,747   copying build/lib/multiqc/modules/sexdeterrmine/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sexdeterrmine
2025-06-08T10:05:37,749   copying build/lib/multiqc/modules/sexdeterrmine/sexdeterrmine.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sexdeterrmine
2025-06-08T10:05:37,753   creating build/bdist.linux-armv7l/wheel/multiqc/modules/mosdepth
2025-06-08T10:05:37,754   copying build/lib/multiqc/modules/mosdepth/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mosdepth
2025-06-08T10:05:37,756   copying build/lib/multiqc/modules/mosdepth/mosdepth.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mosdepth
2025-06-08T10:05:37,760   creating build/bdist.linux-armv7l/wheel/multiqc/modules/lima
2025-06-08T10:05:37,761   copying build/lib/multiqc/modules/lima/lima.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/lima
2025-06-08T10:05:37,764   copying build/lib/multiqc/modules/lima/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/lima
2025-06-08T10:05:37,766   creating build/bdist.linux-armv7l/wheel/multiqc/modules/mapdamage
2025-06-08T10:05:37,768   copying build/lib/multiqc/modules/mapdamage/mapdamage.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mapdamage
2025-06-08T10:05:37,771   copying build/lib/multiqc/modules/mapdamage/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mapdamage
2025-06-08T10:05:37,773   copying build/lib/multiqc/modules/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules
2025-06-08T10:05:37,775   creating build/bdist.linux-armv7l/wheel/multiqc/modules/slamdunk
2025-06-08T10:05:37,777   copying build/lib/multiqc/modules/slamdunk/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/slamdunk
2025-06-08T10:05:37,779   copying build/lib/multiqc/modules/slamdunk/slamdunk.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/slamdunk
2025-06-08T10:05:37,783   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bcftools
2025-06-08T10:05:37,784   copying build/lib/multiqc/modules/bcftools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bcftools
2025-06-08T10:05:37,786   copying build/lib/multiqc/modules/bcftools/bcftools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bcftools
2025-06-08T10:05:37,789   copying build/lib/multiqc/modules/bcftools/stats.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bcftools
2025-06-08T10:05:37,792   creating build/bdist.linux-armv7l/wheel/multiqc/modules/kallisto
2025-06-08T10:05:37,794   copying build/lib/multiqc/modules/kallisto/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/kallisto
2025-06-08T10:05:37,796   copying build/lib/multiqc/modules/kallisto/kallisto.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/kallisto
2025-06-08T10:05:37,799   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bclconvert
2025-06-08T10:05:37,800   copying build/lib/multiqc/modules/bclconvert/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bclconvert
2025-06-08T10:05:37,803   copying build/lib/multiqc/modules/bclconvert/bclconvert.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bclconvert
2025-06-08T10:05:37,807   creating build/bdist.linux-armv7l/wheel/multiqc/modules/ivar
2025-06-08T10:05:37,808   copying build/lib/multiqc/modules/ivar/ivar.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ivar
2025-06-08T10:05:37,811   copying build/lib/multiqc/modules/ivar/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ivar
2025-06-08T10:05:37,813   creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastp
2025-06-08T10:05:37,815   copying build/lib/multiqc/modules/fastp/fastp.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastp
2025-06-08T10:05:37,817   copying build/lib/multiqc/modules/fastp/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastp
2025-06-08T10:05:37,820   creating build/bdist.linux-armv7l/wheel/multiqc/modules/rockhopper
2025-06-08T10:05:37,821   copying build/lib/multiqc/modules/rockhopper/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rockhopper
2025-06-08T10:05:37,823   copying build/lib/multiqc/modules/rockhopper/rockhopper.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rockhopper
2025-06-08T10:05:37,828   creating build/bdist.linux-armv7l/wheel/multiqc/modules/mirtop
2025-06-08T10:05:37,829   copying build/lib/multiqc/modules/mirtop/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mirtop
2025-06-08T10:05:37,831   copying build/lib/multiqc/modules/mirtop/mirtop.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mirtop
2025-06-08T10:05:37,835   creating build/bdist.linux-armv7l/wheel/multiqc/modules/cutadapt
2025-06-08T10:05:37,836   copying build/lib/multiqc/modules/cutadapt/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cutadapt
2025-06-08T10:05:37,838   copying build/lib/multiqc/modules/cutadapt/cutadapt.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cutadapt
2025-06-08T10:05:37,841   creating build/bdist.linux-armv7l/wheel/multiqc/modules/peddy
2025-06-08T10:05:37,843   copying build/lib/multiqc/modules/peddy/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/peddy
2025-06-08T10:05:37,845   copying build/lib/multiqc/modules/peddy/peddy.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/peddy
2025-06-08T10:05:37,848   creating build/bdist.linux-armv7l/wheel/multiqc/modules/hops
2025-06-08T10:05:37,849   copying build/lib/multiqc/modules/hops/hops.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hops
2025-06-08T10:05:37,852   copying build/lib/multiqc/modules/hops/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hops
2025-06-08T10:05:37,854   creating build/bdist.linux-armv7l/wheel/multiqc/modules/jellyfish
2025-06-08T10:05:37,856   copying build/lib/multiqc/modules/jellyfish/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/jellyfish
2025-06-08T10:05:37,858   copying build/lib/multiqc/modules/jellyfish/jellyfish.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/jellyfish
2025-06-08T10:05:37,861   creating build/bdist.linux-armv7l/wheel/multiqc/modules/biobambam2
2025-06-08T10:05:37,862   copying build/lib/multiqc/modules/biobambam2/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/biobambam2
2025-06-08T10:05:37,864   copying build/lib/multiqc/modules/biobambam2/biobambam2.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/biobambam2
2025-06-08T10:05:37,867   creating build/bdist.linux-armv7l/wheel/multiqc/modules/snpeff
2025-06-08T10:05:37,868   copying build/lib/multiqc/modules/snpeff/snpeff.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/snpeff
2025-06-08T10:05:37,871   copying build/lib/multiqc/modules/snpeff/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/snpeff
2025-06-08T10:05:37,873   creating build/bdist.linux-armv7l/wheel/multiqc/modules/checkqc
2025-06-08T10:05:37,874   copying build/lib/multiqc/modules/checkqc/checkqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/checkqc
2025-06-08T10:05:37,877   copying build/lib/multiqc/modules/checkqc/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/checkqc
2025-06-08T10:05:37,880   creating build/bdist.linux-armv7l/wheel/multiqc/modules/sargasso
2025-06-08T10:05:37,881   copying build/lib/multiqc/modules/sargasso/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sargasso
2025-06-08T10:05:37,883   copying build/lib/multiqc/modules/sargasso/sargasso.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sargasso
2025-06-08T10:05:37,887   creating build/bdist.linux-armv7l/wheel/multiqc/modules/hicexplorer
2025-06-08T10:05:37,888   copying build/lib/multiqc/modules/hicexplorer/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hicexplorer
2025-06-08T10:05:37,890   copying build/lib/multiqc/modules/hicexplorer/hicexplorer.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hicexplorer
2025-06-08T10:05:37,893   creating build/bdist.linux-armv7l/wheel/multiqc/modules/mgikit
2025-06-08T10:05:37,895   copying build/lib/multiqc/modules/mgikit/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mgikit
2025-06-08T10:05:37,897   copying build/lib/multiqc/modules/mgikit/mgikit.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mgikit
2025-06-08T10:05:37,900   creating build/bdist.linux-armv7l/wheel/multiqc/modules/nanoq
2025-06-08T10:05:37,902   copying build/lib/multiqc/modules/nanoq/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/nanoq
2025-06-08T10:05:37,904   copying build/lib/multiqc/modules/nanoq/nanoq.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/nanoq
2025-06-08T10:05:37,907   creating build/bdist.linux-armv7l/wheel/multiqc/modules/percolator
2025-06-08T10:05:37,908   copying build/lib/multiqc/modules/percolator/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/percolator
2025-06-08T10:05:37,910   copying build/lib/multiqc/modules/percolator/percolator.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/percolator
2025-06-08T10:05:37,913   creating build/bdist.linux-armv7l/wheel/multiqc/modules/flexbar
2025-06-08T10:05:37,914   copying build/lib/multiqc/modules/flexbar/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/flexbar
2025-06-08T10:05:37,917   copying build/lib/multiqc/modules/flexbar/flexbar.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/flexbar
2025-06-08T10:05:37,920   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bustools
2025-06-08T10:05:37,921   copying build/lib/multiqc/modules/bustools/bustools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bustools
2025-06-08T10:05:37,925   copying build/lib/multiqc/modules/bustools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bustools
2025-06-08T10:05:37,928   creating build/bdist.linux-armv7l/wheel/multiqc/modules/flash
2025-06-08T10:05:37,930   copying build/lib/multiqc/modules/flash/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/flash
2025-06-08T10:05:37,933   copying build/lib/multiqc/modules/flash/flash.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/flash
2025-06-08T10:05:37,938   creating build/bdist.linux-armv7l/wheel/multiqc/modules/qc3C
2025-06-08T10:05:37,939   copying build/lib/multiqc/modules/qc3C/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/qc3C
2025-06-08T10:05:37,944   copying build/lib/multiqc/modules/qc3C/qc3C.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/qc3C
2025-06-08T10:05:37,992   creating build/bdist.linux-armv7l/wheel/multiqc/modules/ngsbits
2025-06-08T10:05:37,994   copying build/lib/multiqc/modules/ngsbits/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ngsbits
2025-06-08T10:05:37,997   copying build/lib/multiqc/modules/ngsbits/utils.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ngsbits
2025-06-08T10:05:38,000   copying build/lib/multiqc/modules/ngsbits/mappingqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ngsbits
2025-06-08T10:05:38,004   copying build/lib/multiqc/modules/ngsbits/samplegender.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ngsbits
2025-06-08T10:05:38,007   copying build/lib/multiqc/modules/ngsbits/readqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ngsbits
2025-06-08T10:05:38,011   copying build/lib/multiqc/modules/ngsbits/ngsbits.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ngsbits
2025-06-08T10:05:38,013   creating build/bdist.linux-armv7l/wheel/multiqc/modules/tophat
2025-06-08T10:05:38,014   copying build/lib/multiqc/modules/tophat/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/tophat
2025-06-08T10:05:38,017   copying build/lib/multiqc/modules/tophat/tophat.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/tophat
2025-06-08T10:05:38,019   creating build/bdist.linux-armv7l/wheel/multiqc/modules/macs2
2025-06-08T10:05:38,021   copying build/lib/multiqc/modules/macs2/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/macs2
2025-06-08T10:05:38,022   copying build/lib/multiqc/modules/macs2/macs2.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/macs2
2025-06-08T10:05:38,025   creating build/bdist.linux-armv7l/wheel/multiqc/modules/rna_seqc
2025-06-08T10:05:38,026   copying build/lib/multiqc/modules/rna_seqc/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rna_seqc
2025-06-08T10:05:38,029   copying build/lib/multiqc/modules/rna_seqc/rna_seqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rna_seqc
2025-06-08T10:05:38,032   creating build/bdist.linux-armv7l/wheel/multiqc/modules/featurecounts
2025-06-08T10:05:38,033   copying build/lib/multiqc/modules/featurecounts/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/featurecounts
2025-06-08T10:05:38,035   copying build/lib/multiqc/modules/featurecounts/featurecounts.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/featurecounts
2025-06-08T10:05:38,038   creating build/bdist.linux-armv7l/wheel/multiqc/modules/seqera_cli
2025-06-08T10:05:38,039   copying build/lib/multiqc/modules/seqera_cli/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/seqera_cli
2025-06-08T10:05:38,041   copying build/lib/multiqc/modules/seqera_cli/seqera_cli.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/seqera_cli
2025-06-08T10:05:38,045   creating build/bdist.linux-armv7l/wheel/multiqc/modules/hisat2
2025-06-08T10:05:38,046   copying build/lib/multiqc/modules/hisat2/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hisat2
2025-06-08T10:05:38,048   copying build/lib/multiqc/modules/hisat2/hisat2.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hisat2
2025-06-08T10:05:38,051   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bases2fastq
2025-06-08T10:05:38,052   copying build/lib/multiqc/modules/bases2fastq/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bases2fastq
2025-06-08T10:05:38,054   copying build/lib/multiqc/modules/bases2fastq/plot_runs.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bases2fastq
2025-06-08T10:05:38,057   copying build/lib/multiqc/modules/bases2fastq/plot_project_runs.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bases2fastq
2025-06-08T10:05:38,060   copying build/lib/multiqc/modules/bases2fastq/plot_samples.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bases2fastq
2025-06-08T10:05:38,062   copying build/lib/multiqc/modules/bases2fastq/bases2fastq.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bases2fastq
2025-06-08T10:05:38,066   creating build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools
2025-06-08T10:05:38,067   copying build/lib/multiqc/modules/deeptools/bamPEFragmentSizeDistribution.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,069   copying build/lib/multiqc/modules/deeptools/plotCorrelation.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,071   copying build/lib/multiqc/modules/deeptools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,073   copying build/lib/multiqc/modules/deeptools/plotPCA.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,075   copying build/lib/multiqc/modules/deeptools/estimateReadFiltering.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,078   copying build/lib/multiqc/modules/deeptools/plotEnrichment.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,080   copying build/lib/multiqc/modules/deeptools/bamPEFragmentSizeTable.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,083   copying build/lib/multiqc/modules/deeptools/plotProfile.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,085   copying build/lib/multiqc/modules/deeptools/plotCoverage.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,088   copying build/lib/multiqc/modules/deeptools/deeptools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,090   copying build/lib/multiqc/modules/deeptools/plotFingerprint.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/deeptools
2025-06-08T10:05:38,093   creating build/bdist.linux-armv7l/wheel/multiqc/modules/kat
2025-06-08T10:05:38,094   copying build/lib/multiqc/modules/kat/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/kat
2025-06-08T10:05:38,097   copying build/lib/multiqc/modules/kat/kat.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/kat
2025-06-08T10:05:38,100   creating build/bdist.linux-armv7l/wheel/multiqc/modules/isoseq
2025-06-08T10:05:38,101   copying build/lib/multiqc/modules/isoseq/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/isoseq
2025-06-08T10:05:38,103   copying build/lib/multiqc/modules/isoseq/isoseq.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/isoseq
2025-06-08T10:05:38,106   creating build/bdist.linux-armv7l/wheel/multiqc/modules/vg
2025-06-08T10:05:38,107   copying build/lib/multiqc/modules/vg/vg.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/vg
2025-06-08T10:05:38,110   copying build/lib/multiqc/modules/vg/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/vg
2025-06-08T10:05:38,113   creating build/bdist.linux-armv7l/wheel/multiqc/modules/pbmarkdup
2025-06-08T10:05:38,114   copying build/lib/multiqc/modules/pbmarkdup/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pbmarkdup
2025-06-08T10:05:38,116   copying build/lib/multiqc/modules/pbmarkdup/pbmarkdup.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pbmarkdup
2025-06-08T10:05:38,119   creating build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash
2025-06-08T10:05:38,120   copying build/lib/multiqc/modules/sourmash/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sourmash
2025-06-08T10:05:38,122   copying build/lib/multiqc/modules/sourmash/gather.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sourmash
2025-06-08T10:05:38,125   copying build/lib/multiqc/modules/sourmash/compare.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sourmash
2025-06-08T10:05:38,127   copying build/lib/multiqc/modules/sourmash/sourmash.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sourmash
2025-06-08T10:05:38,130   creating build/bdist.linux-armv7l/wheel/multiqc/modules/optitype
2025-06-08T10:05:38,132   copying build/lib/multiqc/modules/optitype/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/optitype
2025-06-08T10:05:38,134   copying build/lib/multiqc/modules/optitype/optitype.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/optitype
2025-06-08T10:05:38,137   creating build/bdist.linux-armv7l/wheel/multiqc/modules/sambamba
2025-06-08T10:05:38,138   copying build/lib/multiqc/modules/sambamba/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sambamba
2025-06-08T10:05:38,141   copying build/lib/multiqc/modules/sambamba/sambamba.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sambamba
2025-06-08T10:05:38,143   copying build/lib/multiqc/modules/sambamba/markdup.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sambamba
2025-06-08T10:05:38,146   creating build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger_arc
2025-06-08T10:05:38,148   copying build/lib/multiqc/modules/cellranger_arc/cellranger_arc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cellranger_arc
2025-06-08T10:05:38,151   copying build/lib/multiqc/modules/cellranger_arc/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cellranger_arc
2025-06-08T10:05:38,153   copying build/lib/multiqc/modules/cellranger_arc/utils.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cellranger_arc
2025-06-08T10:05:38,156   creating build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger_arc/tests
2025-06-08T10:05:38,157   copying build/lib/multiqc/modules/cellranger_arc/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cellranger_arc/tests
2025-06-08T10:05:38,159   copying build/lib/multiqc/modules/cellranger_arc/tests/test_cellranger_arc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/cellranger_arc/tests
2025-06-08T10:05:38,162   creating build/bdist.linux-armv7l/wheel/multiqc/modules/seqyclean
2025-06-08T10:05:38,164   copying build/lib/multiqc/modules/seqyclean/seqyclean.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/seqyclean
2025-06-08T10:05:38,166   copying build/lib/multiqc/modules/seqyclean/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/seqyclean
2025-06-08T10:05:38,169   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie2
2025-06-08T10:05:38,170   copying build/lib/multiqc/modules/bowtie2/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bowtie2
2025-06-08T10:05:38,172   copying build/lib/multiqc/modules/bowtie2/bowtie2.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bowtie2
2025-06-08T10:05:38,176   creating build/bdist.linux-armv7l/wheel/multiqc/modules/biscuit
2025-06-08T10:05:38,177   copying build/lib/multiqc/modules/biscuit/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/biscuit
2025-06-08T10:05:38,179   copying build/lib/multiqc/modules/biscuit/biscuit.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/biscuit
2025-06-08T10:05:38,183   creating build/bdist.linux-armv7l/wheel/multiqc/modules/salmon
2025-06-08T10:05:38,184   copying build/lib/multiqc/modules/salmon/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/salmon
2025-06-08T10:05:38,186   copying build/lib/multiqc/modules/salmon/salmon.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/salmon
2025-06-08T10:05:38,189   creating build/bdist.linux-armv7l/wheel/multiqc/modules/sickle
2025-06-08T10:05:38,190   copying build/lib/multiqc/modules/sickle/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sickle
2025-06-08T10:05:38,193   copying build/lib/multiqc/modules/sickle/sickle.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sickle
2025-06-08T10:05:38,196   creating build/bdist.linux-armv7l/wheel/multiqc/modules/varscan2
2025-06-08T10:05:38,197   copying build/lib/multiqc/modules/varscan2/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/varscan2
2025-06-08T10:05:38,199   copying build/lib/multiqc/modules/varscan2/varscan2.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/varscan2
2025-06-08T10:05:38,203   creating build/bdist.linux-armv7l/wheel/multiqc/modules/nonpareil
2025-06-08T10:05:38,204   copying build/lib/multiqc/modules/nonpareil/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/nonpareil
2025-06-08T10:05:38,206   copying build/lib/multiqc/modules/nonpareil/nonpareil.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/nonpareil
2025-06-08T10:05:38,210   creating build/bdist.linux-armv7l/wheel/multiqc/modules/sequali
2025-06-08T10:05:38,211   copying build/lib/multiqc/modules/sequali/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sequali
2025-06-08T10:05:38,213   copying build/lib/multiqc/modules/sequali/sequali.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sequali
2025-06-08T10:05:38,218   creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc
2025-06-08T10:05:38,219   copying build/lib/multiqc/modules/dragen_fastqc/read_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen_fastqc
2025-06-08T10:05:38,222   copying build/lib/multiqc/modules/dragen_fastqc/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen_fastqc
2025-06-08T10:05:38,224   copying build/lib/multiqc/modules/dragen_fastqc/dragen_fastqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen_fastqc
2025-06-08T10:05:38,228   copying build/lib/multiqc/modules/dragen_fastqc/base_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen_fastqc
2025-06-08T10:05:38,230   copying build/lib/multiqc/modules/dragen_fastqc/content_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen_fastqc
2025-06-08T10:05:38,233   copying build/lib/multiqc/modules/dragen_fastqc/util.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen_fastqc
2025-06-08T10:05:38,236   creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc/assets
2025-06-08T10:05:38,238   creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc/assets/js
2025-06-08T10:05:38,239   copying build/lib/multiqc/modules/dragen_fastqc/assets/js/multiqc_dragen_fastqc.js -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen_fastqc/assets/js
2025-06-08T10:05:38,243   copying build/lib/multiqc/modules/dragen_fastqc/gc_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen_fastqc
2025-06-08T10:05:38,246   creating build/bdist.linux-armv7l/wheel/multiqc/modules/busco
2025-06-08T10:05:38,247   copying build/lib/multiqc/modules/busco/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/busco
2025-06-08T10:05:38,249   copying build/lib/multiqc/modules/busco/busco.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/busco
2025-06-08T10:05:38,252   creating build/bdist.linux-armv7l/wheel/multiqc/modules/verifybamid
2025-06-08T10:05:38,253   copying build/lib/multiqc/modules/verifybamid/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/verifybamid
2025-06-08T10:05:38,256   copying build/lib/multiqc/modules/verifybamid/verifybamid.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/verifybamid
2025-06-08T10:05:38,259   creating build/bdist.linux-armv7l/wheel/multiqc/modules/damageprofiler
2025-06-08T10:05:38,260   copying build/lib/multiqc/modules/damageprofiler/damageprofiler.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/damageprofiler
2025-06-08T10:05:38,263   copying build/lib/multiqc/modules/damageprofiler/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/damageprofiler
2025-06-08T10:05:38,266   creating build/bdist.linux-armv7l/wheel/multiqc/modules/interop
2025-06-08T10:05:38,267   copying build/lib/multiqc/modules/interop/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/interop
2025-06-08T10:05:38,270   copying build/lib/multiqc/modules/interop/interop.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/interop
2025-06-08T10:05:38,274   creating build/bdist.linux-armv7l/wheel/multiqc/modules/leehom
2025-06-08T10:05:38,276   copying build/lib/multiqc/modules/leehom/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/leehom
2025-06-08T10:05:38,278   copying build/lib/multiqc/modules/leehom/leehom.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/leehom
2025-06-08T10:05:38,281   creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastq_screen
2025-06-08T10:05:38,282   copying build/lib/multiqc/modules/fastq_screen/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastq_screen
2025-06-08T10:05:38,285   copying build/lib/multiqc/modules/fastq_screen/fastq_screen.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastq_screen
2025-06-08T10:05:38,288   creating build/bdist.linux-armv7l/wheel/multiqc/modules/gtdbtk
2025-06-08T10:05:38,290   copying build/lib/multiqc/modules/gtdbtk/gtdbtk.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gtdbtk
2025-06-08T10:05:38,292   copying build/lib/multiqc/modules/gtdbtk/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gtdbtk
2025-06-08T10:05:38,295   creating build/bdist.linux-armv7l/wheel/multiqc/modules/clusterflow
2025-06-08T10:05:38,296   copying build/lib/multiqc/modules/clusterflow/clusterflow.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/clusterflow
2025-06-08T10:05:38,299   copying build/lib/multiqc/modules/clusterflow/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/clusterflow
2025-06-08T10:05:38,302   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bbduk
2025-06-08T10:05:38,303   copying build/lib/multiqc/modules/bbduk/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbduk
2025-06-08T10:05:38,306   copying build/lib/multiqc/modules/bbduk/bbduk.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bbduk
2025-06-08T10:05:38,309   creating build/bdist.linux-armv7l/wheel/multiqc/modules/conpair
2025-06-08T10:05:38,310   copying build/lib/multiqc/modules/conpair/conpair.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/conpair
2025-06-08T10:05:38,313   copying build/lib/multiqc/modules/conpair/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/conpair
2025-06-08T10:05:38,316   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie1
2025-06-08T10:05:38,317   copying build/lib/multiqc/modules/bowtie1/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bowtie1
2025-06-08T10:05:38,319   copying build/lib/multiqc/modules/bowtie1/bowtie1.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bowtie1
2025-06-08T10:05:38,322   creating build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools
2025-06-08T10:05:38,323   copying build/lib/multiqc/modules/vcftools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/vcftools
2025-06-08T10:05:38,325   copying build/lib/multiqc/modules/vcftools/relatedness2.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/vcftools
2025-06-08T10:05:38,327   copying build/lib/multiqc/modules/vcftools/tstv_by_qual.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/vcftools
2025-06-08T10:05:38,329   copying build/lib/multiqc/modules/vcftools/tstv_summary.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/vcftools
2025-06-08T10:05:38,332   copying build/lib/multiqc/modules/vcftools/tstv_by_count.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/vcftools
2025-06-08T10:05:38,334   copying build/lib/multiqc/modules/vcftools/vcftools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/vcftools
2025-06-08T10:05:38,337   creating build/bdist.linux-armv7l/wheel/multiqc/modules/ngsderive
2025-06-08T10:05:38,338   copying build/lib/multiqc/modules/ngsderive/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ngsderive
2025-06-08T10:05:38,341   copying build/lib/multiqc/modules/ngsderive/ngsderive.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/ngsderive
2025-06-08T10:05:38,344   creating build/bdist.linux-armv7l/wheel/multiqc/modules/haplocheck
2025-06-08T10:05:38,345   copying build/lib/multiqc/modules/haplocheck/haplocheck.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/haplocheck
2025-06-08T10:05:38,348   copying build/lib/multiqc/modules/haplocheck/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/haplocheck
2025-06-08T10:05:38,351   creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen
2025-06-08T10:05:38,352   copying build/lib/multiqc/modules/dragen/dragen_gc_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,354   copying build/lib/multiqc/modules/dragen/coverage_hist.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,357   copying build/lib/multiqc/modules/dragen/vc_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,360   copying build/lib/multiqc/modules/dragen/rna_quant_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,363   copying build/lib/multiqc/modules/dragen/mapping_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,366   copying build/lib/multiqc/modules/dragen/trimmer_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,368   copying build/lib/multiqc/modules/dragen/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,371   copying build/lib/multiqc/modules/dragen/overall_mean_cov.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,373   copying build/lib/multiqc/modules/dragen/coverage_per_contig.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,376   copying build/lib/multiqc/modules/dragen/utils.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,379   copying build/lib/multiqc/modules/dragen/sc_rna_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,381   copying build/lib/multiqc/modules/dragen/time_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,383   copying build/lib/multiqc/modules/dragen/coverage_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,387   copying build/lib/multiqc/modules/dragen/fragment_length.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,390   copying build/lib/multiqc/modules/dragen/dragen.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,392   copying build/lib/multiqc/modules/dragen/sc_atac_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,394   copying build/lib/multiqc/modules/dragen/ploidy_estimation_metrics.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,397   creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen/tests
2025-06-08T10:05:38,398   copying build/lib/multiqc/modules/dragen/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen/tests
2025-06-08T10:05:38,400   copying build/lib/multiqc/modules/dragen/tests/test_dragen.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen/tests
2025-06-08T10:05:38,402   copying build/lib/multiqc/modules/dragen/rna_transcript_cov.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/dragen
2025-06-08T10:05:38,405   creating build/bdist.linux-armv7l/wheel/multiqc/modules/odgi
2025-06-08T10:05:38,406   copying build/lib/multiqc/modules/odgi/odgi.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/odgi
2025-06-08T10:05:38,409   copying build/lib/multiqc/modules/odgi/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/odgi
2025-06-08T10:05:38,412   creating build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc
2025-06-08T10:05:38,413   copying build/lib/multiqc/modules/rseqc/junction_annotation.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,416   copying build/lib/multiqc/modules/rseqc/read_distribution.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,419   copying build/lib/multiqc/modules/rseqc/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,421   copying build/lib/multiqc/modules/rseqc/read_gc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,423   copying build/lib/multiqc/modules/rseqc/read_duplication.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,426   copying build/lib/multiqc/modules/rseqc/gene_body_coverage.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,428   copying build/lib/multiqc/modules/rseqc/rseqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,431   copying build/lib/multiqc/modules/rseqc/junction_saturation.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,433   copying build/lib/multiqc/modules/rseqc/inner_distance.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,435   copying build/lib/multiqc/modules/rseqc/tin.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,437   copying build/lib/multiqc/modules/rseqc/infer_experiment.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,440   copying build/lib/multiqc/modules/rseqc/bam_stat.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/rseqc
2025-06-08T10:05:38,443   creating build/bdist.linux-armv7l/wheel/multiqc/modules/hicpro
2025-06-08T10:05:38,444   copying build/lib/multiqc/modules/hicpro/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hicpro
2025-06-08T10:05:38,447   copying build/lib/multiqc/modules/hicpro/hicpro.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hicpro
2025-06-08T10:05:38,450   creating build/bdist.linux-armv7l/wheel/multiqc/modules/adapterremoval
2025-06-08T10:05:38,451   copying build/lib/multiqc/modules/adapterremoval/adapterremoval.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/adapterremoval
2025-06-08T10:05:38,455   copying build/lib/multiqc/modules/adapterremoval/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/adapterremoval
2025-06-08T10:05:38,457   creating build/bdist.linux-armv7l/wheel/multiqc/modules/porechop
2025-06-08T10:05:38,458   copying build/lib/multiqc/modules/porechop/porechop.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/porechop
2025-06-08T10:05:38,461   copying build/lib/multiqc/modules/porechop/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/porechop
2025-06-08T10:05:38,464   creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc
2025-06-08T10:05:38,465   copying build/lib/multiqc/modules/fastqc/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastqc
2025-06-08T10:05:38,468   creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc
2025-06-08T10:05:38,469   copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_txome.txt -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastqc/fastqc_theoretical_gc
2025-06-08T10:05:38,471   copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_genome.txt -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastqc/fastqc_theoretical_gc
2025-06-08T10:05:38,474   copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_genome.txt -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastqc/fastqc_theoretical_gc
2025-06-08T10:05:38,476   copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_txome.txt -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastqc/fastqc_theoretical_gc
2025-06-08T10:05:38,478   copying build/lib/multiqc/modules/fastqc/fastqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastqc
2025-06-08T10:05:38,483   creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets
2025-06-08T10:05:38,485   creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets/css
2025-06-08T10:05:38,486   copying build/lib/multiqc/modules/fastqc/assets/css/multiqc_fastqc.css -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastqc/assets/css
2025-06-08T10:05:38,489   creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets/js
2025-06-08T10:05:38,491   copying build/lib/multiqc/modules/fastqc/assets/js/multiqc_fastqc.js -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fastqc/assets/js
2025-06-08T10:05:38,494   creating build/bdist.linux-armv7l/wheel/multiqc/modules/snpsplit
2025-06-08T10:05:38,496   copying build/lib/multiqc/modules/snpsplit/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/snpsplit
2025-06-08T10:05:38,498   copying build/lib/multiqc/modules/snpsplit/snpsplit.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/snpsplit
2025-06-08T10:05:38,501   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bamtools
2025-06-08T10:05:38,503   copying build/lib/multiqc/modules/bamtools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bamtools
2025-06-08T10:05:38,505   copying build/lib/multiqc/modules/bamtools/stats.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bamtools
2025-06-08T10:05:38,507   copying build/lib/multiqc/modules/bamtools/bamtools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bamtools
2025-06-08T10:05:38,510   creating build/bdist.linux-armv7l/wheel/multiqc/modules/happy
2025-06-08T10:05:38,511   copying build/lib/multiqc/modules/happy/happy.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/happy
2025-06-08T10:05:38,514   copying build/lib/multiqc/modules/happy/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/happy
2025-06-08T10:05:38,517   creating build/bdist.linux-armv7l/wheel/multiqc/modules/biobloomtools
2025-06-08T10:05:38,518   copying build/lib/multiqc/modules/biobloomtools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/biobloomtools
2025-06-08T10:05:38,520   copying build/lib/multiqc/modules/biobloomtools/biobloomtools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/biobloomtools
2025-06-08T10:05:38,523   creating build/bdist.linux-armv7l/wheel/multiqc/modules/skewer
2025-06-08T10:05:38,525   copying build/lib/multiqc/modules/skewer/skewer.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/skewer
2025-06-08T10:05:38,527   copying build/lib/multiqc/modules/skewer/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/skewer
2025-06-08T10:05:38,530   creating build/bdist.linux-armv7l/wheel/multiqc/modules/hifiasm
2025-06-08T10:05:38,531   copying build/lib/multiqc/modules/hifiasm/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hifiasm
2025-06-08T10:05:38,533   copying build/lib/multiqc/modules/hifiasm/hifiasm.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hifiasm
2025-06-08T10:05:38,536   creating build/bdist.linux-armv7l/wheel/multiqc/modules/sortmerna
2025-06-08T10:05:38,537   copying build/lib/multiqc/modules/sortmerna/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sortmerna
2025-06-08T10:05:38,539   copying build/lib/multiqc/modules/sortmerna/sortmerna.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/sortmerna
2025-06-08T10:05:38,543   creating build/bdist.linux-armv7l/wheel/multiqc/modules/theta2
2025-06-08T10:05:38,544   copying build/lib/multiqc/modules/theta2/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/theta2
2025-06-08T10:05:38,546   copying build/lib/multiqc/modules/theta2/theta2.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/theta2
2025-06-08T10:05:38,549   creating build/bdist.linux-armv7l/wheel/multiqc/modules/xenome
2025-06-08T10:05:38,550   copying build/lib/multiqc/modules/xenome/xenome.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/xenome
2025-06-08T10:05:38,553   copying build/lib/multiqc/modules/xenome/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/xenome
2025-06-08T10:05:38,555   creating build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio
2025-06-08T10:05:38,557   copying build/lib/multiqc/modules/fgbio/fgbio.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fgbio
2025-06-08T10:05:38,559   copying build/lib/multiqc/modules/fgbio/group_reads_by_umi.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fgbio
2025-06-08T10:05:38,561   copying build/lib/multiqc/modules/fgbio/error_rate_by_read_position.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fgbio
2025-06-08T10:05:38,564   copying build/lib/multiqc/modules/fgbio/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/fgbio
2025-06-08T10:05:38,567   creating build/bdist.linux-armv7l/wheel/multiqc/modules/prokka
2025-06-08T10:05:38,568   copying build/lib/multiqc/modules/prokka/prokka.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/prokka
2025-06-08T10:05:38,571   copying build/lib/multiqc/modules/prokka/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/prokka
2025-06-08T10:05:38,574   creating build/bdist.linux-armv7l/wheel/multiqc/modules/gffcompare
2025-06-08T10:05:38,575   copying build/lib/multiqc/modules/gffcompare/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gffcompare
2025-06-08T10:05:38,578   copying build/lib/multiqc/modules/gffcompare/gffcompare.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gffcompare
2025-06-08T10:05:38,581   creating build/bdist.linux-armv7l/wheel/multiqc/modules/diamond
2025-06-08T10:05:38,582   copying build/lib/multiqc/modules/diamond/diamond.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/diamond
2025-06-08T10:05:38,585   copying build/lib/multiqc/modules/diamond/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/diamond
2025-06-08T10:05:38,588   creating build/bdist.linux-armv7l/wheel/multiqc/modules/seqwho
2025-06-08T10:05:38,590   copying build/lib/multiqc/modules/seqwho/seqwho.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/seqwho
2025-06-08T10:05:38,593   copying build/lib/multiqc/modules/seqwho/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/seqwho
2025-06-08T10:05:38,595   creating build/bdist.linux-armv7l/wheel/multiqc/modules/whatshap
2025-06-08T10:05:38,597   copying build/lib/multiqc/modules/whatshap/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/whatshap
2025-06-08T10:05:38,599   copying build/lib/multiqc/modules/whatshap/whatshap.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/whatshap
2025-06-08T10:05:38,603   creating build/bdist.linux-armv7l/wheel/multiqc/modules/disambiguate
2025-06-08T10:05:38,604   copying build/lib/multiqc/modules/disambiguate/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/disambiguate
2025-06-08T10:05:38,606   copying build/lib/multiqc/modules/disambiguate/disambiguate.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/disambiguate
2025-06-08T10:05:38,609   creating build/bdist.linux-armv7l/wheel/multiqc/modules/somalier
2025-06-08T10:05:38,610   copying build/lib/multiqc/modules/somalier/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/somalier
2025-06-08T10:05:38,613   copying build/lib/multiqc/modules/somalier/somalier.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/somalier
2025-06-08T10:05:38,617   creating build/bdist.linux-armv7l/wheel/multiqc/modules/jcvi
2025-06-08T10:05:38,618   copying build/lib/multiqc/modules/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/jcvi
2025-06-08T10:05:38,620   copying build/lib/multiqc/modules/jcvi/jcvi.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/jcvi
2025-06-08T10:05:38,624   creating build/bdist.linux-armv7l/wheel/multiqc/modules/checkm2
2025-06-08T10:05:38,625   copying build/lib/multiqc/modules/checkm2/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/checkm2
2025-06-08T10:05:38,627   copying build/lib/multiqc/modules/checkm2/checkm2.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/checkm2
2025-06-08T10:05:38,631   creating build/bdist.linux-armv7l/wheel/multiqc/modules/pangolin
2025-06-08T10:05:38,632   copying build/lib/multiqc/modules/pangolin/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pangolin
2025-06-08T10:05:38,634   copying build/lib/multiqc/modules/pangolin/pangolin.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pangolin
2025-06-08T10:05:38,638   creating build/bdist.linux-armv7l/wheel/multiqc/modules/kaiju
2025-06-08T10:05:38,639   copying build/lib/multiqc/modules/kaiju/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/kaiju
2025-06-08T10:05:38,641   copying build/lib/multiqc/modules/kaiju/kaiju.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/kaiju
2025-06-08T10:05:38,645   creating build/bdist.linux-armv7l/wheel/multiqc/modules/multivcfanalyzer
2025-06-08T10:05:38,646   copying build/lib/multiqc/modules/multivcfanalyzer/multivcfanalyzer.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/multivcfanalyzer
2025-06-08T10:05:38,649   copying build/lib/multiqc/modules/multivcfanalyzer/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/multivcfanalyzer
2025-06-08T10:05:38,651   creating build/bdist.linux-armv7l/wheel/multiqc/modules/hicup
2025-06-08T10:05:38,653   copying build/lib/multiqc/modules/hicup/hicup.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hicup
2025-06-08T10:05:38,656   copying build/lib/multiqc/modules/hicup/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hicup
2025-06-08T10:05:38,659   creating build/bdist.linux-armv7l/wheel/multiqc/modules/anglerfish
2025-06-08T10:05:38,660   copying build/lib/multiqc/modules/anglerfish/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/anglerfish
2025-06-08T10:05:38,662   copying build/lib/multiqc/modules/anglerfish/anglerfish.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/anglerfish
2025-06-08T10:05:38,666   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bamdst
2025-06-08T10:05:38,667   copying build/lib/multiqc/modules/bamdst/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bamdst
2025-06-08T10:05:38,670   copying build/lib/multiqc/modules/bamdst/bamdst.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bamdst
2025-06-08T10:05:38,673   creating build/bdist.linux-armv7l/wheel/multiqc/modules/supernova
2025-06-08T10:05:38,674   copying build/lib/multiqc/modules/supernova/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/supernova
2025-06-08T10:05:38,677   copying build/lib/multiqc/modules/supernova/supernova.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/supernova
2025-06-08T10:05:38,680   creating build/bdist.linux-armv7l/wheel/multiqc/modules/pychopper
2025-06-08T10:05:38,682   copying build/lib/multiqc/modules/pychopper/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pychopper
2025-06-08T10:05:38,684   copying build/lib/multiqc/modules/pychopper/pychopper.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pychopper
2025-06-08T10:05:38,688   creating build/bdist.linux-armv7l/wheel/multiqc/modules/nextclade
2025-06-08T10:05:38,689   copying build/lib/multiqc/modules/nextclade/nextclade.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/nextclade
2025-06-08T10:05:38,692   copying build/lib/multiqc/modules/nextclade/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/nextclade
2025-06-08T10:05:38,695   creating build/bdist.linux-armv7l/wheel/multiqc/modules/trimmomatic
2025-06-08T10:05:38,696   copying build/lib/multiqc/modules/trimmomatic/trimmomatic.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/trimmomatic
2025-06-08T10:05:38,699   copying build/lib/multiqc/modules/trimmomatic/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/trimmomatic
2025-06-08T10:05:38,701   creating build/bdist.linux-armv7l/wheel/multiqc/modules/clipandmerge
2025-06-08T10:05:38,703   copying build/lib/multiqc/modules/clipandmerge/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/clipandmerge
2025-06-08T10:05:38,705   copying build/lib/multiqc/modules/clipandmerge/clipandmerge.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/clipandmerge
2025-06-08T10:05:38,708   creating build/bdist.linux-armv7l/wheel/multiqc/modules/librarian
2025-06-08T10:05:38,709   copying build/lib/multiqc/modules/librarian/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/librarian
2025-06-08T10:05:38,711   copying build/lib/multiqc/modules/librarian/librarian.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/librarian
2025-06-08T10:05:38,714   creating build/bdist.linux-armv7l/wheel/multiqc/modules/afterqc
2025-06-08T10:05:38,715   copying build/lib/multiqc/modules/afterqc/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/afterqc
2025-06-08T10:05:38,718   copying build/lib/multiqc/modules/afterqc/afterqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/afterqc
2025-06-08T10:05:38,721   creating build/bdist.linux-armv7l/wheel/multiqc/modules/gopeaks
2025-06-08T10:05:38,722   copying build/lib/multiqc/modules/gopeaks/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gopeaks
2025-06-08T10:05:38,725   copying build/lib/multiqc/modules/gopeaks/gopeaks.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/gopeaks
2025-06-08T10:05:38,728   creating build/bdist.linux-armv7l/wheel/multiqc/modules/homer
2025-06-08T10:05:38,729   copying build/lib/multiqc/modules/homer/homer.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/homer
2025-06-08T10:05:38,732   copying build/lib/multiqc/modules/homer/tagdirectory.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/homer
2025-06-08T10:05:38,735   copying build/lib/multiqc/modules/homer/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/homer
2025-06-08T10:05:38,737   copying build/lib/multiqc/modules/homer/findpeaks.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/homer
2025-06-08T10:05:38,740   creating build/bdist.linux-armv7l/wheel/multiqc/modules/pairtools
2025-06-08T10:05:38,742   copying build/lib/multiqc/modules/pairtools/pairtools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pairtools
2025-06-08T10:05:38,745   copying build/lib/multiqc/modules/pairtools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pairtools
2025-06-08T10:05:38,747   copying build/lib/multiqc/modules/pairtools/utils.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pairtools
2025-06-08T10:05:38,750   copying build/lib/multiqc/modules/pairtools/params.yml -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pairtools
2025-06-08T10:05:38,753   creating build/bdist.linux-armv7l/wheel/multiqc/modules/stacks
2025-06-08T10:05:38,754   copying build/lib/multiqc/modules/stacks/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/stacks
2025-06-08T10:05:38,756   copying build/lib/multiqc/modules/stacks/stacks.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/stacks
2025-06-08T10:05:38,760   creating build/bdist.linux-armv7l/wheel/multiqc/modules/samtools
2025-06-08T10:05:38,761   copying build/lib/multiqc/modules/samtools/flagstat.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samtools
2025-06-08T10:05:38,764   copying build/lib/multiqc/modules/samtools/coverage.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samtools
2025-06-08T10:05:38,766   copying build/lib/multiqc/modules/samtools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samtools
2025-06-08T10:05:38,768   copying build/lib/multiqc/modules/samtools/samtools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samtools
2025-06-08T10:05:38,771   copying build/lib/multiqc/modules/samtools/stats.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samtools
2025-06-08T10:05:38,774   creating build/bdist.linux-armv7l/wheel/multiqc/modules/samtools/tests
2025-06-08T10:05:38,775   copying build/lib/multiqc/modules/samtools/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samtools/tests
2025-06-08T10:05:38,777   copying build/lib/multiqc/modules/samtools/tests/test_flagstat.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samtools/tests
2025-06-08T10:05:38,779   copying build/lib/multiqc/modules/samtools/idxstats.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samtools
2025-06-08T10:05:38,782   copying build/lib/multiqc/modules/samtools/rmdup.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samtools
2025-06-08T10:05:38,784   copying build/lib/multiqc/modules/samtools/markdup.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/samtools
2025-06-08T10:05:38,787   creating build/bdist.linux-armv7l/wheel/multiqc/modules/bcl2fastq
2025-06-08T10:05:38,789   copying build/lib/multiqc/modules/bcl2fastq/bcl2fastq.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bcl2fastq
2025-06-08T10:05:38,792   copying build/lib/multiqc/modules/bcl2fastq/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/bcl2fastq
2025-06-08T10:05:38,794   creating build/bdist.linux-armv7l/wheel/multiqc/modules/umitools
2025-06-08T10:05:38,795   copying build/lib/multiqc/modules/umitools/umitools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/umitools
2025-06-08T10:05:38,799   copying build/lib/multiqc/modules/umitools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/umitools
2025-06-08T10:05:38,801   creating build/bdist.linux-armv7l/wheel/multiqc/modules/umitools/tests
2025-06-08T10:05:38,803   copying build/lib/multiqc/modules/umitools/tests/test_umitools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/umitools/tests
2025-06-08T10:05:38,805   copying build/lib/multiqc/modules/umitools/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/umitools/tests
2025-06-08T10:05:38,807   creating build/bdist.linux-armv7l/wheel/multiqc/modules/mtnucratio
2025-06-08T10:05:38,809   copying build/lib/multiqc/modules/mtnucratio/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mtnucratio
2025-06-08T10:05:38,811   copying build/lib/multiqc/modules/mtnucratio/mtnucratio.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mtnucratio
2025-06-08T10:05:38,814   creating build/bdist.linux-armv7l/wheel/multiqc/modules/methylqa
2025-06-08T10:05:38,816   copying build/lib/multiqc/modules/methylqa/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/methylqa
2025-06-08T10:05:38,819   copying build/lib/multiqc/modules/methylqa/methylqa.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/methylqa
2025-06-08T10:05:38,822   creating build/bdist.linux-armv7l/wheel/multiqc/modules/pycoqc
2025-06-08T10:05:38,823   copying build/lib/multiqc/modules/pycoqc/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pycoqc
2025-06-08T10:05:38,826   copying build/lib/multiqc/modules/pycoqc/pycoqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/pycoqc
2025-06-08T10:05:38,829   creating build/bdist.linux-armv7l/wheel/multiqc/modules/phantompeakqualtools
2025-06-08T10:05:38,830   copying build/lib/multiqc/modules/phantompeakqualtools/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/phantompeakqualtools
2025-06-08T10:05:38,833   copying build/lib/multiqc/modules/phantompeakqualtools/phantompeakqualtools.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/phantompeakqualtools
2025-06-08T10:05:38,836   creating build/bdist.linux-armv7l/wheel/multiqc/modules/hostile
2025-06-08T10:05:38,837   copying build/lib/multiqc/modules/hostile/hostile.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hostile
2025-06-08T10:05:38,840   copying build/lib/multiqc/modules/hostile/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/hostile
2025-06-08T10:05:38,843   creating build/bdist.linux-armv7l/wheel/multiqc/modules/mirtrace
2025-06-08T10:05:38,844   copying build/lib/multiqc/modules/mirtrace/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mirtrace
2025-06-08T10:05:38,846   copying build/lib/multiqc/modules/mirtrace/mirtrace.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/mirtrace
2025-06-08T10:05:38,850   creating build/bdist.linux-armv7l/wheel/multiqc/modules/longranger
2025-06-08T10:05:38,852   copying build/lib/multiqc/modules/longranger/longranger.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/longranger
2025-06-08T10:05:38,855   copying build/lib/multiqc/modules/longranger/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/longranger
2025-06-08T10:05:38,858   creating build/bdist.linux-armv7l/wheel/multiqc/modules/quast
2025-06-08T10:05:38,859   copying build/lib/multiqc/modules/quast/quast.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/quast
2025-06-08T10:05:38,862   copying build/lib/multiqc/modules/quast/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/quast
2025-06-08T10:05:38,865   creating build/bdist.linux-armv7l/wheel/multiqc/modules/goleft_indexcov
2025-06-08T10:05:38,866   copying build/lib/multiqc/modules/goleft_indexcov/goleft_indexcov.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/goleft_indexcov
2025-06-08T10:05:38,869   copying build/lib/multiqc/modules/goleft_indexcov/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/goleft_indexcov
2025-06-08T10:05:38,872   creating build/bdist.linux-armv7l/wheel/multiqc/modules/malt
2025-06-08T10:05:38,873   copying build/lib/multiqc/modules/malt/malt.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/malt
2025-06-08T10:05:38,876   copying build/lib/multiqc/modules/malt/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/malt
2025-06-08T10:05:38,879   creating build/bdist.linux-armv7l/wheel/multiqc/modules/qorts
2025-06-08T10:05:38,880   copying build/lib/multiqc/modules/qorts/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/qorts
2025-06-08T10:05:38,882   copying build/lib/multiqc/modules/qorts/qorts.py -> build/bdist.linux-armv7l/wheel/./multiqc/modules/qorts
2025-06-08T10:05:38,886   creating build/bdist.linux-armv7l/wheel/multiqc/utils
2025-06-08T10:05:38,887   copying build/lib/multiqc/utils/config_schema.py -> build/bdist.linux-armv7l/wheel/./multiqc/utils
2025-06-08T10:05:38,890   copying build/lib/multiqc/utils/mqc_colour.py -> build/bdist.linux-armv7l/wheel/./multiqc/utils
2025-06-08T10:05:38,893   copying build/lib/multiqc/utils/util_functions.py -> build/bdist.linux-armv7l/wheel/./multiqc/utils
2025-06-08T10:05:38,896   copying build/lib/multiqc/utils/config.py -> build/bdist.linux-armv7l/wheel/./multiqc/utils
2025-06-08T10:05:38,899   copying build/lib/multiqc/utils/megaqc.py -> build/bdist.linux-armv7l/wheel/./multiqc/utils
2025-06-08T10:05:38,901   copying build/lib/multiqc/utils/config_schema.json -> build/bdist.linux-armv7l/wheel/./multiqc/utils
2025-06-08T10:05:38,904   copying build/lib/multiqc/utils/pyaml_env.py -> build/bdist.linux-armv7l/wheel/./multiqc/utils
2025-06-08T10:05:38,907   copying build/lib/multiqc/utils/report.py -> build/bdist.linux-armv7l/wheel/./multiqc/utils
2025-06-08T10:05:38,909   copying build/lib/multiqc/utils/testing.py -> build/bdist.linux-armv7l/wheel/./multiqc/utils
2025-06-08T10:05:38,911   copying build/lib/multiqc/base_module.py -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:38,914   copying build/lib/multiqc/config_defaults.yaml -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:38,917   copying build/lib/multiqc/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:38,919   copying build/lib/multiqc/py.typed -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:38,921   copying build/lib/multiqc/types.py -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:38,923   copying build/lib/multiqc/search_patterns.yaml -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:38,926   copying build/lib/multiqc/config.py -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:38,929   copying build/lib/multiqc/multiqc.py -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:38,933   creating build/bdist.linux-armv7l/wheel/multiqc/core
2025-06-08T10:05:38,934   copying build/lib/multiqc/core/version_check.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,936   copying build/lib/multiqc/core/order_modules_and_sections.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,939   copying build/lib/multiqc/core/tmp_dir.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,941   copying build/lib/multiqc/core/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,943   copying build/lib/multiqc/core/plugin_hooks.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,945   creating build/bdist.linux-armv7l/wheel/multiqc/core/special_case_modules
2025-06-08T10:05:38,947   copying build/lib/multiqc/core/special_case_modules/load_multiqc_data.py -> build/bdist.linux-armv7l/wheel/./multiqc/core/special_case_modules
2025-06-08T10:05:38,949   copying build/lib/multiqc/core/special_case_modules/profile_runtime.py -> build/bdist.linux-armv7l/wheel/./multiqc/core/special_case_modules
2025-06-08T10:05:38,952   copying build/lib/multiqc/core/special_case_modules/software_versions.py -> build/bdist.linux-armv7l/wheel/./multiqc/core/special_case_modules
2025-06-08T10:05:38,954   copying build/lib/multiqc/core/special_case_modules/custom_content.py -> build/bdist.linux-armv7l/wheel/./multiqc/core/special_case_modules
2025-06-08T10:05:38,958   copying build/lib/multiqc/core/ai.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,961   copying build/lib/multiqc/core/plot_data_store.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,964   copying build/lib/multiqc/core/strict_helpers.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,966   copying build/lib/multiqc/core/software_versions.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,969   copying build/lib/multiqc/core/exceptions.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,971   copying build/lib/multiqc/core/config_check.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,973   copying build/lib/multiqc/core/log_and_rich.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,976   copying build/lib/multiqc/core/file_search.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,979   copying build/lib/multiqc/core/write_results.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,982   copying build/lib/multiqc/core/update_config.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,985   copying build/lib/multiqc/core/exec_modules.py -> build/bdist.linux-armv7l/wheel/./multiqc/core
2025-06-08T10:05:38,988   creating build/bdist.linux-armv7l/wheel/multiqc/templates
2025-06-08T10:05:38,989   creating build/bdist.linux-armv7l/wheel/multiqc/templates/gathered
2025-06-08T10:05:38,991   copying build/lib/multiqc/templates/gathered/content.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/gathered
2025-06-08T10:05:38,993   copying build/lib/multiqc/templates/gathered/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/templates/gathered
2025-06-08T10:05:38,995   copying build/lib/multiqc/templates/gathered/nav.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/gathered
2025-06-08T10:05:38,997   copying build/lib/multiqc/templates/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/templates
2025-06-08T10:05:39,000   creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo
2025-06-08T10:05:39,001   copying build/lib/multiqc/templates/geo/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo
2025-06-08T10:05:39,003   copying build/lib/multiqc/templates/geo/includes.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo
2025-06-08T10:05:39,006   creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets
2025-06-08T10:05:39,008   creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/css
2025-06-08T10:05:39,009   copying build/lib/multiqc/templates/geo/assets/css/bootstrap.min.css -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/css
2025-06-08T10:05:39,015   creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img
2025-06-08T10:05:39,016   copying build/lib/multiqc/templates/geo/assets/img/mchammer.gif -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,020   copying build/lib/multiqc/templates/geo/assets/img/hot.gif -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,023   copying build/lib/multiqc/templates/geo/assets/img/glyphicons-halflings.png -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,026   copying build/lib/multiqc/templates/geo/assets/img/new.gif -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,028   copying build/lib/multiqc/templates/geo/assets/img/new2.gif -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,031   copying build/lib/multiqc/templates/geo/assets/img/progress.gif -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,033   copying build/lib/multiqc/templates/geo/assets/img/flames.gif -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,037   copying build/lib/multiqc/templates/geo/assets/img/stars.gif -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,040   copying build/lib/multiqc/templates/geo/assets/img/glyphicons-halflings-white.png -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,042   copying build/lib/multiqc/templates/geo/assets/img/emailme.gif -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,045   copying build/lib/multiqc/templates/geo/assets/img/microfab.gif -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,048   copying build/lib/multiqc/templates/geo/assets/img/rainbow.gif -> build/bdist.linux-armv7l/wheel/./multiqc/templates/geo/assets/img
2025-06-08T10:05:39,051   creating build/bdist.linux-armv7l/wheel/multiqc/templates/default
2025-06-08T10:05:39,052   copying build/lib/multiqc/templates/default/content.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,055   copying build/lib/multiqc/templates/default/head.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,057   copying build/lib/multiqc/templates/default/foot.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,060   copying build/lib/multiqc/templates/default/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,062   copying build/lib/multiqc/templates/default/includes.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,065   creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets
2025-06-08T10:05:39,067   creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/css
2025-06-08T10:05:39,068   copying build/lib/multiqc/templates/default/assets/css/bootstrap.min.css -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/css
2025-06-08T10:05:39,073   copying build/lib/multiqc/templates/default/assets/css/default_multiqc.css -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/css
2025-06-08T10:05:39,076   copying build/lib/multiqc/templates/default/assets/css/jquery.toast.css -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/css
2025-06-08T10:05:39,079   creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img
2025-06-08T10:05:39,081   copying build/lib/multiqc/templates/default/assets/img/seqera_logo_mono.png -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/img
2025-06-08T10:05:39,083   copying build/lib/multiqc/templates/default/assets/img/seqera_logo.png -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/img
2025-06-08T10:05:39,085   copying build/lib/multiqc/templates/default/assets/img/favicon-16x16.png -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/img
2025-06-08T10:05:39,088   copying build/lib/multiqc/templates/default/assets/img/favicon-96x96.png -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/img
2025-06-08T10:05:39,090   copying build/lib/multiqc/templates/default/assets/img/MultiQC_logo.png -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/img
2025-06-08T10:05:39,093   copying build/lib/multiqc/templates/default/assets/img/favicon-32x32.png -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/img
2025-06-08T10:05:39,095   copying build/lib/multiqc/templates/default/assets/img/MultiQC_logo_dark.svg -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/img
2025-06-08T10:05:39,098   creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js
2025-06-08T10:05:39,100   copying build/lib/multiqc/templates/default/assets/js/flat.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js
2025-06-08T10:05:39,102   copying build/lib/multiqc/templates/default/assets/js/decompress.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js
2025-06-08T10:05:39,104   copying build/lib/multiqc/templates/default/assets/js/ai-helpers.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js
2025-06-08T10:05:39,107   copying build/lib/multiqc/templates/default/assets/js/render.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js
2025-06-08T10:05:39,110   copying build/lib/multiqc/templates/default/assets/js/toolbox.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js
2025-06-08T10:05:39,114   copying build/lib/multiqc/templates/default/assets/js/tables.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js
2025-06-08T10:05:39,117   copying build/lib/multiqc/templates/default/assets/js/plotting.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js
2025-06-08T10:05:39,121   creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots
2025-06-08T10:05:39,122   copying build/lib/multiqc/templates/default/assets/js/plots/line.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/plots
2025-06-08T10:05:39,125   copying build/lib/multiqc/templates/default/assets/js/plots/violin.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/plots
2025-06-08T10:05:39,128   copying build/lib/multiqc/templates/default/assets/js/plots/bar.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/plots
2025-06-08T10:05:39,131   copying build/lib/multiqc/templates/default/assets/js/plots/scatter.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/plots
2025-06-08T10:05:39,133   copying build/lib/multiqc/templates/default/assets/js/plots/heatmap.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/plots
2025-06-08T10:05:39,136   copying build/lib/multiqc/templates/default/assets/js/plots/box.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/plots
2025-06-08T10:05:39,138   copying build/lib/multiqc/templates/default/assets/js/ai.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js
2025-06-08T10:05:39,141   copying build/lib/multiqc/templates/default/assets/js/multiqc.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js
2025-06-08T10:05:39,144   creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,146   copying build/lib/multiqc/templates/default/assets/js/packages/plotly-2.27.0.min.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,206   copying build/lib/multiqc/templates/default/assets/js/packages/jquery-3.1.1.min.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,211   copying build/lib/multiqc/templates/default/assets/js/packages/plotly-2.27.0.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,356   copying build/lib/multiqc/templates/default/assets/js/packages/pako_inflate.min.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,360   copying build/lib/multiqc/templates/default/assets/js/packages/jszip.min.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,363   copying build/lib/multiqc/templates/default/assets/js/packages/bootstrap.min.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,366   copying build/lib/multiqc/templates/default/assets/js/packages/showdown.min.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,370   copying build/lib/multiqc/templates/default/assets/js/packages/FileSaver.min.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,372   copying build/lib/multiqc/templates/default/assets/js/packages/jquery-ui.min.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,376   copying build/lib/multiqc/templates/default/assets/js/packages/jquery.tablesorter.min.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,380   copying build/lib/multiqc/templates/default/assets/js/packages/jquery.toast.min.js -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/js/packages
2025-06-08T10:05:39,383   creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts
2025-06-08T10:05:39,384   copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.svg -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/fonts
2025-06-08T10:05:39,390   copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.eot -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/fonts
2025-06-08T10:05:39,393   copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff2 -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/fonts
2025-06-08T10:05:39,396   copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/fonts
2025-06-08T10:05:39,399   copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.ttf -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default/assets/fonts
2025-06-08T10:05:39,403   copying build/lib/multiqc/templates/default/nav.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,405   copying build/lib/multiqc/templates/default/general_stats.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,407   copying build/lib/multiqc/templates/default/toolbox.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,410   copying build/lib/multiqc/templates/default/base.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,412   copying build/lib/multiqc/templates/default/header.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,414   copying build/lib/multiqc/templates/default/footer.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/default
2025-06-08T10:05:39,417   creating build/bdist.linux-armv7l/wheel/multiqc/templates/sections
2025-06-08T10:05:39,418   copying build/lib/multiqc/templates/sections/content.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/sections
2025-06-08T10:05:39,420   copying build/lib/multiqc/templates/sections/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/templates/sections
2025-06-08T10:05:39,423   creating build/bdist.linux-armv7l/wheel/multiqc/templates/simple
2025-06-08T10:05:39,424   copying build/lib/multiqc/templates/simple/foot.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/simple
2025-06-08T10:05:39,426   copying build/lib/multiqc/templates/simple/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/templates/simple
2025-06-08T10:05:39,429   copying build/lib/multiqc/templates/simple/includes.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/simple
2025-06-08T10:05:39,431   copying build/lib/multiqc/templates/simple/nav.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/simple
2025-06-08T10:05:39,433   copying build/lib/multiqc/templates/simple/toolbox.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/simple
2025-06-08T10:05:39,435   copying build/lib/multiqc/templates/simple/header.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/simple
2025-06-08T10:05:39,437   copying build/lib/multiqc/templates/simple/footer.html -> build/bdist.linux-armv7l/wheel/./multiqc/templates/simple
2025-06-08T10:05:39,440   creating build/bdist.linux-armv7l/wheel/multiqc/plots
2025-06-08T10:05:39,441   copying build/lib/multiqc/plots/heatmap.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,444   copying build/lib/multiqc/plots/bargraph.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,447   copying build/lib/multiqc/plots/plot.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,451   copying build/lib/multiqc/plots/__init__.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,453   copying build/lib/multiqc/plots/scatter.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,455   copying build/lib/multiqc/plots/utils.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,457   copying build/lib/multiqc/plots/violin.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,461   copying build/lib/multiqc/plots/table_object.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,464   copying build/lib/multiqc/plots/box.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,467   copying build/lib/multiqc/plots/linegraph.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,470   copying build/lib/multiqc/plots/table.py -> build/bdist.linux-armv7l/wheel/./multiqc/plots
2025-06-08T10:05:39,472   copying build/lib/multiqc/validation.py -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:39,475   copying build/lib/multiqc/report.py -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:39,479   copying build/lib/multiqc/__main__.py -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:39,481   copying build/lib/multiqc/interactive.py -> build/bdist.linux-armv7l/wheel/./multiqc
2025-06-08T10:05:39,484   running install_egg_info
2025-06-08T10:05:39,492   Copying multiqc.egg-info to build/bdist.linux-armv7l/wheel/./multiqc-1.29-py3.11.egg-info
2025-06-08T10:05:39,511   running install_scripts
2025-06-08T10:05:39,534   creating build/bdist.linux-armv7l/wheel/multiqc-1.29.dist-info/WHEEL
2025-06-08T10:05:39,538   creating '/tmp/pip-wheel-vxbvn453/.tmp-xr3dydho/multiqc-1.29-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-06-08T10:05:39,541   adding 'multiqc/__init__.py'
2025-06-08T10:05:39,543   adding 'multiqc/__main__.py'
2025-06-08T10:05:39,552   adding 'multiqc/base_module.py'
2025-06-08T10:05:39,556   adding 'multiqc/config.py'
2025-06-08T10:05:39,559   adding 'multiqc/config_defaults.yaml'
2025-06-08T10:05:39,562   adding 'multiqc/interactive.py'
2025-06-08T10:05:39,565   adding 'multiqc/multiqc.py'
2025-06-08T10:05:39,566   adding 'multiqc/py.typed'
2025-06-08T10:05:39,573   adding 'multiqc/report.py'
2025-06-08T10:05:39,577   adding 'multiqc/search_patterns.yaml'
2025-06-08T10:05:39,579   adding 'multiqc/types.py'
2025-06-08T10:05:39,581   adding 'multiqc/validation.py'
2025-06-08T10:05:39,583   adding 'multiqc/core/__init__.py'
2025-06-08T10:05:39,587   adding 'multiqc/core/ai.py'
2025-06-08T10:05:39,589   adding 'multiqc/core/config_check.py'
2025-06-08T10:05:39,590   adding 'multiqc/core/exceptions.py'
2025-06-08T10:05:39,592   adding 'multiqc/core/exec_modules.py'
2025-06-08T10:05:39,594   adding 'multiqc/core/file_search.py'
2025-06-08T10:05:39,596   adding 'multiqc/core/log_and_rich.py'
2025-06-08T10:05:39,598   adding 'multiqc/core/order_modules_and_sections.py'
2025-06-08T10:05:39,600   adding 'multiqc/core/plot_data_store.py'
2025-06-08T10:05:39,602   adding 'multiqc/core/plugin_hooks.py'
2025-06-08T10:05:39,604   adding 'multiqc/core/software_versions.py'
2025-06-08T10:05:39,605   adding 'multiqc/core/strict_helpers.py'
2025-06-08T10:05:39,606   adding 'multiqc/core/tmp_dir.py'
2025-06-08T10:05:39,608   adding 'multiqc/core/update_config.py'
2025-06-08T10:05:39,609   adding 'multiqc/core/version_check.py'
2025-06-08T10:05:39,613   adding 'multiqc/core/write_results.py'
2025-06-08T10:05:39,619   adding 'multiqc/core/special_case_modules/custom_content.py'
2025-06-08T10:05:39,621   adding 'multiqc/core/special_case_modules/load_multiqc_data.py'
2025-06-08T10:05:39,623   adding 'multiqc/core/special_case_modules/profile_runtime.py'
2025-06-08T10:05:39,625   adding 'multiqc/core/special_case_modules/software_versions.py'
2025-06-08T10:05:39,630   adding 'multiqc/modules/__init__.py'
2025-06-08T10:05:39,632   adding 'multiqc/modules/adapterremoval/__init__.py'
2025-06-08T10:05:39,634   adding 'multiqc/modules/adapterremoval/adapterremoval.py'
2025-06-08T10:05:39,636   adding 'multiqc/modules/afterqc/__init__.py'
2025-06-08T10:05:39,637   adding 'multiqc/modules/afterqc/afterqc.py'
2025-06-08T10:05:39,639   adding 'multiqc/modules/anglerfish/__init__.py'
2025-06-08T10:05:39,641   adding 'multiqc/modules/anglerfish/anglerfish.py'
2025-06-08T10:05:39,643   adding 'multiqc/modules/ataqv/__init__.py'
2025-06-08T10:05:39,645   adding 'multiqc/modules/ataqv/ataqv.py'
2025-06-08T10:05:39,647   adding 'multiqc/modules/bakta/__init__.py'
2025-06-08T10:05:39,649   adding 'multiqc/modules/bakta/bakta.py'
2025-06-08T10:05:39,651   adding 'multiqc/modules/bamdst/__init__.py'
2025-06-08T10:05:39,653   adding 'multiqc/modules/bamdst/bamdst.py'
2025-06-08T10:05:39,655   adding 'multiqc/modules/bamtools/__init__.py'
2025-06-08T10:05:39,657   adding 'multiqc/modules/bamtools/bamtools.py'
2025-06-08T10:05:39,658   adding 'multiqc/modules/bamtools/stats.py'
2025-06-08T10:05:39,660   adding 'multiqc/modules/bases2fastq/__init__.py'
2025-06-08T10:05:39,662   adding 'multiqc/modules/bases2fastq/bases2fastq.py'
2025-06-08T10:05:39,664   adding 'multiqc/modules/bases2fastq/plot_project_runs.py'
2025-06-08T10:05:39,666   adding 'multiqc/modules/bases2fastq/plot_runs.py'
2025-06-08T10:05:39,668   adding 'multiqc/modules/bases2fastq/plot_samples.py'
2025-06-08T10:05:39,670   adding 'multiqc/modules/bbduk/__init__.py'
2025-06-08T10:05:39,672   adding 'multiqc/modules/bbduk/bbduk.py'
2025-06-08T10:05:39,674   adding 'multiqc/modules/bbmap/__init__.py'
2025-06-08T10:05:39,676   adding 'multiqc/modules/bbmap/bbmap.py'
2025-06-08T10:05:39,678   adding 'multiqc/modules/bbmap/bbmap_filetypes.py'
2025-06-08T10:05:39,680   adding 'multiqc/modules/bbmap/plot_aqhist.py'
2025-06-08T10:05:39,681   adding 'multiqc/modules/bbmap/plot_basic_hist.py'
2025-06-08T10:05:39,682   adding 'multiqc/modules/bbmap/plot_bhist.py'
2025-06-08T10:05:39,684   adding 'multiqc/modules/bbmap/plot_bqhist.py'
2025-06-08T10:05:39,685   adding 'multiqc/modules/bbmap/plot_covhist.py'
2025-06-08T10:05:39,687   adding 'multiqc/modules/bbmap/plot_idhist.py'
2025-06-08T10:05:39,688   adding 'multiqc/modules/bbmap/plot_ihist.py'
2025-06-08T10:05:39,689   adding 'multiqc/modules/bbmap/plot_indelhist.py'
2025-06-08T10:05:39,691   adding 'multiqc/modules/bbmap/plot_mhist.py'
2025-06-08T10:05:39,692   adding 'multiqc/modules/bbmap/plot_qahist.py'
2025-06-08T10:05:39,694   adding 'multiqc/modules/bbmap/plot_qchist.py'
2025-06-08T10:05:39,695   adding 'multiqc/modules/bbmap/plot_qhist.py'
2025-06-08T10:05:39,697   adding 'multiqc/modules/bcftools/__init__.py'
2025-06-08T10:05:39,699   adding 'multiqc/modules/bcftools/bcftools.py'
2025-06-08T10:05:39,701   adding 'multiqc/modules/bcftools/stats.py'
2025-06-08T10:05:39,703   adding 'multiqc/modules/bcl2fastq/__init__.py'
2025-06-08T10:05:39,705   adding 'multiqc/modules/bcl2fastq/bcl2fastq.py'
2025-06-08T10:05:39,707   adding 'multiqc/modules/bclconvert/__init__.py'
2025-06-08T10:05:39,712   adding 'multiqc/modules/bclconvert/bclconvert.py'
2025-06-08T10:05:39,714   adding 'multiqc/modules/biobambam2/__init__.py'
2025-06-08T10:05:39,715   adding 'multiqc/modules/biobambam2/biobambam2.py'
2025-06-08T10:05:39,717   adding 'multiqc/modules/biobloomtools/__init__.py'
2025-06-08T10:05:39,719   adding 'multiqc/modules/biobloomtools/biobloomtools.py'
2025-06-08T10:05:39,721   adding 'multiqc/modules/biscuit/__init__.py'
2025-06-08T10:05:39,725   adding 'multiqc/modules/biscuit/biscuit.py'
2025-06-08T10:05:39,727   adding 'multiqc/modules/bismark/__init__.py'
2025-06-08T10:05:39,729   adding 'multiqc/modules/bismark/bismark.py'
2025-06-08T10:05:39,731   adding 'multiqc/modules/bowtie1/__init__.py'
2025-06-08T10:05:39,733   adding 'multiqc/modules/bowtie1/bowtie1.py'
2025-06-08T10:05:39,735   adding 'multiqc/modules/bowtie2/__init__.py'
2025-06-08T10:05:39,737   adding 'multiqc/modules/bowtie2/bowtie2.py'
2025-06-08T10:05:39,739   adding 'multiqc/modules/busco/__init__.py'
2025-06-08T10:05:39,740   adding 'multiqc/modules/busco/busco.py'
2025-06-08T10:05:39,742   adding 'multiqc/modules/bustools/__init__.py'
2025-06-08T10:05:39,744   adding 'multiqc/modules/bustools/bustools.py'
2025-06-08T10:05:39,746   adding 'multiqc/modules/ccs/__init__.py'
2025-06-08T10:05:39,748   adding 'multiqc/modules/ccs/ccs.py'
2025-06-08T10:05:39,750   adding 'multiqc/modules/ccs/tests/__init__.py'
2025-06-08T10:05:39,752   adding 'multiqc/modules/ccs/tests/test_ccs.py'
2025-06-08T10:05:39,754   adding 'multiqc/modules/cellranger/__init__.py'
2025-06-08T10:05:39,755   adding 'multiqc/modules/cellranger/cellranger.py'
2025-06-08T10:05:39,758   adding 'multiqc/modules/cellranger/count.py'
2025-06-08T10:05:39,759   adding 'multiqc/modules/cellranger/utils.py'
2025-06-08T10:05:39,761   adding 'multiqc/modules/cellranger/vdj.py'
2025-06-08T10:05:39,763   adding 'multiqc/modules/cellranger_arc/__init__.py'
2025-06-08T10:05:39,765   adding 'multiqc/modules/cellranger_arc/cellranger_arc.py'
2025-06-08T10:05:39,767   adding 'multiqc/modules/cellranger_arc/utils.py'
2025-06-08T10:05:39,769   adding 'multiqc/modules/cellranger_arc/tests/__init__.py'
2025-06-08T10:05:39,770   adding 'multiqc/modules/cellranger_arc/tests/test_cellranger_arc.py'
2025-06-08T10:05:39,772   adding 'multiqc/modules/cells2stats/__init__.py'
2025-06-08T10:05:39,773   adding 'multiqc/modules/cells2stats/cells2stats.py'
2025-06-08T10:05:39,775   adding 'multiqc/modules/cells2stats/cells2stats_bar_plots.py'
2025-06-08T10:05:39,777   adding 'multiqc/modules/cells2stats/cells2stats_tables.py'
2025-06-08T10:05:39,778   adding 'multiqc/modules/cells2stats/queries.py'
2025-06-08T10:05:39,780   adding 'multiqc/modules/cells2stats/utils.py'
2025-06-08T10:05:39,781   adding 'multiqc/modules/checkm/__init__.py'
2025-06-08T10:05:39,783   adding 'multiqc/modules/checkm/checkm.py'
2025-06-08T10:05:39,785   adding 'multiqc/modules/checkm2/__init__.py'
2025-06-08T10:05:39,786   adding 'multiqc/modules/checkm2/checkm2.py'
2025-06-08T10:05:39,788   adding 'multiqc/modules/checkqc/__init__.py'
2025-06-08T10:05:39,791   adding 'multiqc/modules/checkqc/checkqc.py'
2025-06-08T10:05:39,793   adding 'multiqc/modules/clipandmerge/__init__.py'
2025-06-08T10:05:39,795   adding 'multiqc/modules/clipandmerge/clipandmerge.py'
2025-06-08T10:05:39,796   adding 'multiqc/modules/clusterflow/__init__.py'
2025-06-08T10:05:39,799   adding 'multiqc/modules/clusterflow/clusterflow.py'
2025-06-08T10:05:39,801   adding 'multiqc/modules/conpair/__init__.py'
2025-06-08T10:05:39,802   adding 'multiqc/modules/conpair/conpair.py'
2025-06-08T10:05:39,804   adding 'multiqc/modules/cutadapt/__init__.py'
2025-06-08T10:05:39,807   adding 'multiqc/modules/cutadapt/cutadapt.py'
2025-06-08T10:05:39,809   adding 'multiqc/modules/damageprofiler/__init__.py'
2025-06-08T10:05:39,811   adding 'multiqc/modules/damageprofiler/damageprofiler.py'
2025-06-08T10:05:39,813   adding 'multiqc/modules/dedup/__init__.py'
2025-06-08T10:05:39,815   adding 'multiqc/modules/dedup/dedup.py'
2025-06-08T10:05:39,817   adding 'multiqc/modules/deeptools/__init__.py'
2025-06-08T10:05:39,818   adding 'multiqc/modules/deeptools/bamPEFragmentSizeDistribution.py'
2025-06-08T10:05:39,820   adding 'multiqc/modules/deeptools/bamPEFragmentSizeTable.py'
2025-06-08T10:05:39,822   adding 'multiqc/modules/deeptools/deeptools.py'
2025-06-08T10:05:39,824   adding 'multiqc/modules/deeptools/estimateReadFiltering.py'
2025-06-08T10:05:39,825   adding 'multiqc/modules/deeptools/plotCorrelation.py'
2025-06-08T10:05:39,827   adding 'multiqc/modules/deeptools/plotCoverage.py'
2025-06-08T10:05:39,829   adding 'multiqc/modules/deeptools/plotEnrichment.py'
2025-06-08T10:05:39,831   adding 'multiqc/modules/deeptools/plotFingerprint.py'
2025-06-08T10:05:39,832   adding 'multiqc/modules/deeptools/plotPCA.py'
2025-06-08T10:05:39,834   adding 'multiqc/modules/deeptools/plotProfile.py'
2025-06-08T10:05:39,836   adding 'multiqc/modules/diamond/__init__.py'
2025-06-08T10:05:39,837   adding 'multiqc/modules/diamond/diamond.py'
2025-06-08T10:05:39,839   adding 'multiqc/modules/disambiguate/__init__.py'
2025-06-08T10:05:39,841   adding 'multiqc/modules/disambiguate/disambiguate.py'
2025-06-08T10:05:39,843   adding 'multiqc/modules/dragen/__init__.py'
2025-06-08T10:05:39,844   adding 'multiqc/modules/dragen/coverage_hist.py'
2025-06-08T10:05:39,854   adding 'multiqc/modules/dragen/coverage_metrics.py'
2025-06-08T10:05:39,856   adding 'multiqc/modules/dragen/coverage_per_contig.py'
2025-06-08T10:05:39,858   adding 'multiqc/modules/dragen/dragen.py'
2025-06-08T10:05:39,860   adding 'multiqc/modules/dragen/dragen_gc_metrics.py'
2025-06-08T10:05:39,861   adding 'multiqc/modules/dragen/fragment_length.py'
2025-06-08T10:05:39,865   adding 'multiqc/modules/dragen/mapping_metrics.py'
2025-06-08T10:05:39,867   adding 'multiqc/modules/dragen/overall_mean_cov.py'
2025-06-08T10:05:39,868   adding 'multiqc/modules/dragen/ploidy_estimation_metrics.py'
2025-06-08T10:05:39,870   adding 'multiqc/modules/dragen/rna_quant_metrics.py'
2025-06-08T10:05:39,871   adding 'multiqc/modules/dragen/rna_transcript_cov.py'
2025-06-08T10:05:39,873   adding 'multiqc/modules/dragen/sc_atac_metrics.py'
2025-06-08T10:05:39,874   adding 'multiqc/modules/dragen/sc_rna_metrics.py'
2025-06-08T10:05:39,876   adding 'multiqc/modules/dragen/time_metrics.py'
2025-06-08T10:05:39,877   adding 'multiqc/modules/dragen/trimmer_metrics.py'
2025-06-08T10:05:39,879   adding 'multiqc/modules/dragen/utils.py'
2025-06-08T10:05:39,882   adding 'multiqc/modules/dragen/vc_metrics.py'
2025-06-08T10:05:39,883   adding 'multiqc/modules/dragen/tests/__init__.py'
2025-06-08T10:05:39,885   adding 'multiqc/modules/dragen/tests/test_dragen.py'
2025-06-08T10:05:39,886   adding 'multiqc/modules/dragen_fastqc/__init__.py'
2025-06-08T10:05:39,888   adding 'multiqc/modules/dragen_fastqc/base_metrics.py'
2025-06-08T10:05:39,890   adding 'multiqc/modules/dragen_fastqc/content_metrics.py'
2025-06-08T10:05:39,892   adding 'multiqc/modules/dragen_fastqc/dragen_fastqc.py'
2025-06-08T10:05:39,894   adding 'multiqc/modules/dragen_fastqc/gc_metrics.py'
2025-06-08T10:05:39,895   adding 'multiqc/modules/dragen_fastqc/read_metrics.py'
2025-06-08T10:05:39,897   adding 'multiqc/modules/dragen_fastqc/util.py'
2025-06-08T10:05:39,901   adding 'multiqc/modules/dragen_fastqc/assets/js/multiqc_dragen_fastqc.js'
2025-06-08T10:05:39,903   adding 'multiqc/modules/eigenstratdatabasetools/__init__.py'
2025-06-08T10:05:39,904   adding 'multiqc/modules/eigenstratdatabasetools/eigenstratdatabasetools.py'
2025-06-08T10:05:39,906   adding 'multiqc/modules/fastp/__init__.py'
2025-06-08T10:05:39,909   adding 'multiqc/modules/fastp/fastp.py'
2025-06-08T10:05:39,911   adding 'multiqc/modules/fastq_screen/__init__.py'
2025-06-08T10:05:39,913   adding 'multiqc/modules/fastq_screen/fastq_screen.py'
2025-06-08T10:05:39,914   adding 'multiqc/modules/fastqc/__init__.py'
2025-06-08T10:05:39,922   adding 'multiqc/modules/fastqc/fastqc.py'
2025-06-08T10:05:39,925   adding 'multiqc/modules/fastqc/assets/css/multiqc_fastqc.css'
2025-06-08T10:05:39,930   adding 'multiqc/modules/fastqc/assets/js/multiqc_fastqc.js'
2025-06-08T10:05:39,932   adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_genome.txt'
2025-06-08T10:05:39,933   adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_txome.txt'
2025-06-08T10:05:39,935   adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_genome.txt'
2025-06-08T10:05:39,936   adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_txome.txt'
2025-06-08T10:05:39,938   adding 'multiqc/modules/featurecounts/__init__.py'
2025-06-08T10:05:39,940   adding 'multiqc/modules/featurecounts/featurecounts.py'
2025-06-08T10:05:39,941   adding 'multiqc/modules/fgbio/__init__.py'
2025-06-08T10:05:39,943   adding 'multiqc/modules/fgbio/error_rate_by_read_position.py'
2025-06-08T10:05:39,945   adding 'multiqc/modules/fgbio/fgbio.py'
2025-06-08T10:05:39,946   adding 'multiqc/modules/fgbio/group_reads_by_umi.py'
2025-06-08T10:05:39,948   adding 'multiqc/modules/filtlong/__init__.py'
2025-06-08T10:05:39,949   adding 'multiqc/modules/filtlong/filtlong.py'
2025-06-08T10:05:39,951   adding 'multiqc/modules/flash/__init__.py'
2025-06-08T10:05:39,953   adding 'multiqc/modules/flash/flash.py'
2025-06-08T10:05:39,955   adding 'multiqc/modules/flexbar/__init__.py'
2025-06-08T10:05:39,957   adding 'multiqc/modules/flexbar/flexbar.py'
2025-06-08T10:05:39,959   adding 'multiqc/modules/freyja/__init__.py'
2025-06-08T10:05:39,961   adding 'multiqc/modules/freyja/freyja.py'
2025-06-08T10:05:39,962   adding 'multiqc/modules/ganon/__init__.py'
2025-06-08T10:05:39,965   adding 'multiqc/modules/ganon/ganon.py'
2025-06-08T10:05:39,967   adding 'multiqc/modules/gatk/__init__.py'
2025-06-08T10:05:39,970   adding 'multiqc/modules/gatk/analyze_saturation_mutagenesis.py'
2025-06-08T10:05:39,972   adding 'multiqc/modules/gatk/base_recalibrator.py'
2025-06-08T10:05:39,973   adding 'multiqc/modules/gatk/gatk.py'
2025-06-08T10:05:39,975   adding 'multiqc/modules/gatk/utils.py'
2025-06-08T10:05:39,977   adding 'multiqc/modules/gatk/varianteval.py'
2025-06-08T10:05:39,979   adding 'multiqc/modules/gffcompare/__init__.py'
2025-06-08T10:05:39,981   adding 'multiqc/modules/gffcompare/gffcompare.py'
2025-06-08T10:05:39,983   adding 'multiqc/modules/glimpse/__init__.py'
2025-06-08T10:05:39,985   adding 'multiqc/modules/glimpse/err_grp.py'
2025-06-08T10:05:39,987   adding 'multiqc/modules/glimpse/err_spl.py'
2025-06-08T10:05:39,988   adding 'multiqc/modules/glimpse/glimpse.py'
2025-06-08T10:05:39,990   adding 'multiqc/modules/goleft_indexcov/__init__.py'
2025-06-08T10:05:39,992   adding 'multiqc/modules/goleft_indexcov/goleft_indexcov.py'
2025-06-08T10:05:39,994   adding 'multiqc/modules/gopeaks/__init__.py'
2025-06-08T10:05:39,995   adding 'multiqc/modules/gopeaks/gopeaks.py'
2025-06-08T10:05:39,997   adding 'multiqc/modules/gtdbtk/__init__.py'
2025-06-08T10:05:39,999   adding 'multiqc/modules/gtdbtk/gtdbtk.py'
2025-06-08T10:05:40,000   adding 'multiqc/modules/haplocheck/__init__.py'
2025-06-08T10:05:40,002   adding 'multiqc/modules/haplocheck/haplocheck.py'
2025-06-08T10:05:40,004   adding 'multiqc/modules/happy/__init__.py'
2025-06-08T10:05:40,005   adding 'multiqc/modules/happy/happy.py'
2025-06-08T10:05:40,007   adding 'multiqc/modules/hicexplorer/__init__.py'
2025-06-08T10:05:40,009   adding 'multiqc/modules/hicexplorer/hicexplorer.py'
2025-06-08T10:05:40,011   adding 'multiqc/modules/hicpro/__init__.py'
2025-06-08T10:05:40,014   adding 'multiqc/modules/hicpro/hicpro.py'
2025-06-08T10:05:40,016   adding 'multiqc/modules/hicup/__init__.py'
2025-06-08T10:05:40,018   adding 'multiqc/modules/hicup/hicup.py'
2025-06-08T10:05:40,020   adding 'multiqc/modules/hifiasm/__init__.py'
2025-06-08T10:05:40,021   adding 'multiqc/modules/hifiasm/hifiasm.py'
2025-06-08T10:05:40,023   adding 'multiqc/modules/hisat2/__init__.py'
2025-06-08T10:05:40,025   adding 'multiqc/modules/hisat2/hisat2.py'
2025-06-08T10:05:40,027   adding 'multiqc/modules/homer/__init__.py'
2025-06-08T10:05:40,028   adding 'multiqc/modules/homer/findpeaks.py'
2025-06-08T10:05:40,030   adding 'multiqc/modules/homer/homer.py'
2025-06-08T10:05:40,032   adding 'multiqc/modules/homer/tagdirectory.py'
2025-06-08T10:05:40,034   adding 'multiqc/modules/hops/__init__.py'
2025-06-08T10:05:40,036   adding 'multiqc/modules/hops/hops.py'
2025-06-08T10:05:40,038   adding 'multiqc/modules/hostile/__init__.py'
2025-06-08T10:05:40,040   adding 'multiqc/modules/hostile/hostile.py'
2025-06-08T10:05:40,042   adding 'multiqc/modules/htseq/__init__.py'
2025-06-08T10:05:40,043   adding 'multiqc/modules/htseq/htseq.py'
2025-06-08T10:05:40,045   adding 'multiqc/modules/humid/__init__.py'
2025-06-08T10:05:40,047   adding 'multiqc/modules/humid/clusters.py'
2025-06-08T10:05:40,048   adding 'multiqc/modules/humid/counts.py'
2025-06-08T10:05:40,050   adding 'multiqc/modules/humid/humid.py'
2025-06-08T10:05:40,051   adding 'multiqc/modules/humid/neighbours.py'
2025-06-08T10:05:40,053   adding 'multiqc/modules/humid/stats.py'
2025-06-08T10:05:40,055   adding 'multiqc/modules/interop/__init__.py'
2025-06-08T10:05:40,057   adding 'multiqc/modules/interop/interop.py'
2025-06-08T10:05:40,059   adding 'multiqc/modules/isoseq/__init__.py'
2025-06-08T10:05:40,061   adding 'multiqc/modules/isoseq/isoseq.py'
2025-06-08T10:05:40,063   adding 'multiqc/modules/ivar/__init__.py'
2025-06-08T10:05:40,065   adding 'multiqc/modules/ivar/ivar.py'
2025-06-08T10:05:40,067   adding 'multiqc/modules/jcvi/__init__.py'
2025-06-08T10:05:40,069   adding 'multiqc/modules/jcvi/jcvi.py'
2025-06-08T10:05:40,071   adding 'multiqc/modules/jellyfish/__init__.py'
2025-06-08T10:05:40,073   adding 'multiqc/modules/jellyfish/jellyfish.py'
2025-06-08T10:05:40,074   adding 'multiqc/modules/kaiju/__init__.py'
2025-06-08T10:05:40,077   adding 'multiqc/modules/kaiju/kaiju.py'
2025-06-08T10:05:40,079   adding 'multiqc/modules/kallisto/__init__.py'
2025-06-08T10:05:40,080   adding 'multiqc/modules/kallisto/kallisto.py'
2025-06-08T10:05:40,082   adding 'multiqc/modules/kat/__init__.py'
2025-06-08T10:05:40,084   adding 'multiqc/modules/kat/kat.py'
2025-06-08T10:05:40,086   adding 'multiqc/modules/kraken/__init__.py'
2025-06-08T10:05:40,089   adding 'multiqc/modules/kraken/kraken.py'
2025-06-08T10:05:40,091   adding 'multiqc/modules/leehom/__init__.py'
2025-06-08T10:05:40,092   adding 'multiqc/modules/leehom/leehom.py'
2025-06-08T10:05:40,094   adding 'multiqc/modules/librarian/__init__.py'
2025-06-08T10:05:40,096   adding 'multiqc/modules/librarian/librarian.py'
2025-06-08T10:05:40,097   adding 'multiqc/modules/lima/__init__.py'
2025-06-08T10:05:40,100   adding 'multiqc/modules/lima/lima.py'
2025-06-08T10:05:40,102   adding 'multiqc/modules/longranger/__init__.py'
2025-06-08T10:05:40,104   adding 'multiqc/modules/longranger/longranger.py'
2025-06-08T10:05:40,106   adding 'multiqc/modules/macs2/__init__.py'
2025-06-08T10:05:40,108   adding 'multiqc/modules/macs2/macs2.py'
2025-06-08T10:05:40,110   adding 'multiqc/modules/malt/__init__.py'
2025-06-08T10:05:40,111   adding 'multiqc/modules/malt/malt.py'
2025-06-08T10:05:40,113   adding 'multiqc/modules/mapdamage/__init__.py'
2025-06-08T10:05:40,116   adding 'multiqc/modules/mapdamage/mapdamage.py'
2025-06-08T10:05:40,117   adding 'multiqc/modules/megahit/__init__.py'
2025-06-08T10:05:40,119   adding 'multiqc/modules/megahit/megahit.py'
2025-06-08T10:05:40,121   adding 'multiqc/modules/metaphlan/__init__.py'
2025-06-08T10:05:40,123   adding 'multiqc/modules/metaphlan/metaphlan.py'
2025-06-08T10:05:40,125   adding 'multiqc/modules/methylqa/__init__.py'
2025-06-08T10:05:40,127   adding 'multiqc/modules/methylqa/methylqa.py'
2025-06-08T10:05:40,128   adding 'multiqc/modules/mgikit/__init__.py'
2025-06-08T10:05:40,131   adding 'multiqc/modules/mgikit/mgikit.py'
2025-06-08T10:05:40,133   adding 'multiqc/modules/minionqc/__init__.py'
2025-06-08T10:05:40,135   adding 'multiqc/modules/minionqc/minionqc.py'
2025-06-08T10:05:40,137   adding 'multiqc/modules/mirtop/__init__.py'
2025-06-08T10:05:40,139   adding 'multiqc/modules/mirtop/mirtop.py'
2025-06-08T10:05:40,141   adding 'multiqc/modules/mirtrace/__init__.py'
2025-06-08T10:05:40,143   adding 'multiqc/modules/mirtrace/mirtrace.py'
2025-06-08T10:05:40,144   adding 'multiqc/modules/mosaicatcher/__init__.py'
2025-06-08T10:05:40,146   adding 'multiqc/modules/mosaicatcher/mosaicatcher.py'
2025-06-08T10:05:40,148   adding 'multiqc/modules/mosdepth/__init__.py'
2025-06-08T10:05:40,151   adding 'multiqc/modules/mosdepth/mosdepth.py'
2025-06-08T10:05:40,153   adding 'multiqc/modules/motus/__init__.py'
2025-06-08T10:05:40,155   adding 'multiqc/modules/motus/motus.py'
2025-06-08T10:05:40,157   adding 'multiqc/modules/mtnucratio/__init__.py'
2025-06-08T10:05:40,158   adding 'multiqc/modules/mtnucratio/mtnucratio.py'
2025-06-08T10:05:40,160   adding 'multiqc/modules/multivcfanalyzer/__init__.py'
2025-06-08T10:05:40,162   adding 'multiqc/modules/multivcfanalyzer/multivcfanalyzer.py'
2025-06-08T10:05:40,164   adding 'multiqc/modules/nanoq/__init__.py'
2025-06-08T10:05:40,166   adding 'multiqc/modules/nanoq/nanoq.py'
2025-06-08T10:05:40,168   adding 'multiqc/modules/nanostat/__init__.py'
2025-06-08T10:05:40,171   adding 'multiqc/modules/nanostat/nanostat.py'
2025-06-08T10:05:40,173   adding 'multiqc/modules/nextclade/__init__.py'
2025-06-08T10:05:40,175   adding 'multiqc/modules/nextclade/nextclade.py'
2025-06-08T10:05:40,177   adding 'multiqc/modules/ngsbits/__init__.py'
2025-06-08T10:05:40,178   adding 'multiqc/modules/ngsbits/mappingqc.py'
2025-06-08T10:05:40,180   adding 'multiqc/modules/ngsbits/ngsbits.py'
2025-06-08T10:05:40,181   adding 'multiqc/modules/ngsbits/readqc.py'
2025-06-08T10:05:40,183   adding 'multiqc/modules/ngsbits/samplegender.py'
2025-06-08T10:05:40,184   adding 'multiqc/modules/ngsbits/utils.py'
2025-06-08T10:05:40,186   adding 'multiqc/modules/ngsderive/__init__.py'
2025-06-08T10:05:40,188   adding 'multiqc/modules/ngsderive/ngsderive.py'
2025-06-08T10:05:40,190   adding 'multiqc/modules/nonpareil/__init__.py'
2025-06-08T10:05:40,193   adding 'multiqc/modules/nonpareil/nonpareil.py'
2025-06-08T10:05:40,195   adding 'multiqc/modules/odgi/__init__.py'
2025-06-08T10:05:40,197   adding 'multiqc/modules/odgi/odgi.py'
2025-06-08T10:05:40,199   adding 'multiqc/modules/optitype/__init__.py'
2025-06-08T10:05:40,201   adding 'multiqc/modules/optitype/optitype.py'
2025-06-08T10:05:40,202   adding 'multiqc/modules/pairtools/__init__.py'
2025-06-08T10:05:40,205   adding 'multiqc/modules/pairtools/pairtools.py'
2025-06-08T10:05:40,206   adding 'multiqc/modules/pairtools/params.yml'
2025-06-08T10:05:40,208   adding 'multiqc/modules/pairtools/utils.py'
2025-06-08T10:05:40,210   adding 'multiqc/modules/pangolin/__init__.py'
2025-06-08T10:05:40,212   adding 'multiqc/modules/pangolin/pangolin.py'
2025-06-08T10:05:40,214   adding 'multiqc/modules/pbmarkdup/__init__.py'
2025-06-08T10:05:40,216   adding 'multiqc/modules/pbmarkdup/pbmarkdup.py'
2025-06-08T10:05:40,217   adding 'multiqc/modules/peddy/__init__.py'
2025-06-08T10:05:40,220   adding 'multiqc/modules/peddy/peddy.py'
2025-06-08T10:05:40,221   adding 'multiqc/modules/percolator/__init__.py'
2025-06-08T10:05:40,223   adding 'multiqc/modules/percolator/percolator.py'
2025-06-08T10:05:40,225   adding 'multiqc/modules/phantompeakqualtools/__init__.py'
2025-06-08T10:05:40,226   adding 'multiqc/modules/phantompeakqualtools/phantompeakqualtools.py'
2025-06-08T10:05:40,229   adding 'multiqc/modules/picard/AlignmentSummaryMetrics.py'
2025-06-08T10:05:40,231   adding 'multiqc/modules/picard/BaseDistributionByCycleMetrics.py'
2025-06-08T10:05:40,233   adding 'multiqc/modules/picard/CrosscheckFingerprints.py'
2025-06-08T10:05:40,235   adding 'multiqc/modules/picard/ExtractIlluminaBarcodes.py'
2025-06-08T10:05:40,236   adding 'multiqc/modules/picard/GcBiasMetrics.py'
2025-06-08T10:05:40,239   adding 'multiqc/modules/picard/HsMetrics.py'
2025-06-08T10:05:40,241   adding 'multiqc/modules/picard/IlluminaBasecallingMetrics.py'
2025-06-08T10:05:40,243   adding 'multiqc/modules/picard/IlluminaLaneMetrics.py'
2025-06-08T10:05:40,245   adding 'multiqc/modules/picard/InsertSizeMetrics.py'
2025-06-08T10:05:40,247   adding 'multiqc/modules/picard/MarkDuplicates.py'
2025-06-08T10:05:40,249   adding 'multiqc/modules/picard/MarkIlluminaAdapters.py'
2025-06-08T10:05:40,250   adding 'multiqc/modules/picard/OxoGMetrics.py'
2025-06-08T10:05:40,251   adding 'multiqc/modules/picard/QualityByCycleMetrics.py'
2025-06-08T10:05:40,253   adding 'multiqc/modules/picard/QualityScoreDistributionMetrics.py'
2025-06-08T10:05:40,254   adding 'multiqc/modules/picard/QualityYieldMetrics.py'
2025-06-08T10:05:40,256   adding 'multiqc/modules/picard/RnaSeqMetrics.py'
2025-06-08T10:05:40,258   adding 'multiqc/modules/picard/RrbsSummaryMetrics.py'
2025-06-08T10:05:40,260   adding 'multiqc/modules/picard/TargetedPcrMetrics.py'
2025-06-08T10:05:40,262   adding 'multiqc/modules/picard/ValidateSamFile.py'
2025-06-08T10:05:40,264   adding 'multiqc/modules/picard/VariantCallingMetrics.py'
2025-06-08T10:05:40,266   adding 'multiqc/modules/picard/WgsMetrics.py'
2025-06-08T10:05:40,268   adding 'multiqc/modules/picard/__init__.py'
2025-06-08T10:05:40,270   adding 'multiqc/modules/picard/picard.py'
2025-06-08T10:05:40,272   adding 'multiqc/modules/picard/util.py'
2025-06-08T10:05:40,274   adding 'multiqc/modules/picard/tests/__init__.py'
2025-06-08T10:05:40,275   adding 'multiqc/modules/picard/tests/test_picard.py'
2025-06-08T10:05:40,277   adding 'multiqc/modules/porechop/__init__.py'
2025-06-08T10:05:40,279   adding 'multiqc/modules/porechop/porechop.py'
2025-06-08T10:05:40,281   adding 'multiqc/modules/preseq/__init__.py'
2025-06-08T10:05:40,284   adding 'multiqc/modules/preseq/preseq.py'
2025-06-08T10:05:40,286   adding 'multiqc/modules/prinseqplusplus/__init__.py'
2025-06-08T10:05:40,287   adding 'multiqc/modules/prinseqplusplus/prinseqplusplus.py'
2025-06-08T10:05:40,289   adding 'multiqc/modules/prokka/__init__.py'
2025-06-08T10:05:40,291   adding 'multiqc/modules/prokka/prokka.py'
2025-06-08T10:05:40,293   adding 'multiqc/modules/purple/__init__.py'
2025-06-08T10:05:40,295   adding 'multiqc/modules/purple/purple.py'
2025-06-08T10:05:40,297   adding 'multiqc/modules/pychopper/__init__.py'
2025-06-08T10:05:40,298   adding 'multiqc/modules/pychopper/pychopper.py'
2025-06-08T10:05:40,300   adding 'multiqc/modules/pycoqc/__init__.py'
2025-06-08T10:05:40,302   adding 'multiqc/modules/pycoqc/pycoqc.py'
2025-06-08T10:05:40,304   adding 'multiqc/modules/qc3C/__init__.py'
2025-06-08T10:05:40,309   adding 'multiqc/modules/qc3C/qc3C.py'
2025-06-08T10:05:40,311   adding 'multiqc/modules/qorts/__init__.py'
2025-06-08T10:05:40,313   adding 'multiqc/modules/qorts/qorts.py'
2025-06-08T10:05:40,317   adding 'multiqc/modules/qualimap/QM_BamQC.py'
2025-06-08T10:05:40,320   adding 'multiqc/modules/qualimap/QM_RNASeq.py'
2025-06-08T10:05:40,321   adding 'multiqc/modules/qualimap/__init__.py'
2025-06-08T10:05:40,323   adding 'multiqc/modules/qualimap/qualimap.py'
2025-06-08T10:05:40,324   adding 'multiqc/modules/quast/__init__.py'
2025-06-08T10:05:40,327   adding 'multiqc/modules/quast/quast.py'
2025-06-08T10:05:40,329   adding 'multiqc/modules/rna_seqc/__init__.py'
2025-06-08T10:05:40,331   adding 'multiqc/modules/rna_seqc/rna_seqc.py'
2025-06-08T10:05:40,333   adding 'multiqc/modules/rockhopper/__init__.py'
2025-06-08T10:05:40,334   adding 'multiqc/modules/rockhopper/rockhopper.py'
2025-06-08T10:05:40,336   adding 'multiqc/modules/rsem/__init__.py'
2025-06-08T10:05:40,338   adding 'multiqc/modules/rsem/rsem.py'
2025-06-08T10:05:40,340   adding 'multiqc/modules/rseqc/__init__.py'
2025-06-08T10:05:40,341   adding 'multiqc/modules/rseqc/bam_stat.py'
2025-06-08T10:05:40,343   adding 'multiqc/modules/rseqc/gene_body_coverage.py'
2025-06-08T10:05:40,345   adding 'multiqc/modules/rseqc/infer_experiment.py'
2025-06-08T10:05:40,346   adding 'multiqc/modules/rseqc/inner_distance.py'
2025-06-08T10:05:40,348   adding 'multiqc/modules/rseqc/junction_annotation.py'
2025-06-08T10:05:40,350   adding 'multiqc/modules/rseqc/junction_saturation.py'
2025-06-08T10:05:40,351   adding 'multiqc/modules/rseqc/read_distribution.py'
2025-06-08T10:05:40,353   adding 'multiqc/modules/rseqc/read_duplication.py'
2025-06-08T10:05:40,354   adding 'multiqc/modules/rseqc/read_gc.py'
2025-06-08T10:05:40,356   adding 'multiqc/modules/rseqc/rseqc.py'
2025-06-08T10:05:40,357   adding 'multiqc/modules/rseqc/tin.py'
2025-06-08T10:05:40,359   adding 'multiqc/modules/salmon/__init__.py'
2025-06-08T10:05:40,361   adding 'multiqc/modules/salmon/salmon.py'
2025-06-08T10:05:40,363   adding 'multiqc/modules/sambamba/__init__.py'
2025-06-08T10:05:40,364   adding 'multiqc/modules/sambamba/markdup.py'
2025-06-08T10:05:40,366   adding 'multiqc/modules/sambamba/sambamba.py'
2025-06-08T10:05:40,368   adding 'multiqc/modules/samblaster/__init__.py'
2025-06-08T10:05:40,369   adding 'multiqc/modules/samblaster/samblaster.py'
2025-06-08T10:05:40,371   adding 'multiqc/modules/samtools/__init__.py'
2025-06-08T10:05:40,373   adding 'multiqc/modules/samtools/coverage.py'
2025-06-08T10:05:40,375   adding 'multiqc/modules/samtools/flagstat.py'
2025-06-08T10:05:40,377   adding 'multiqc/modules/samtools/idxstats.py'
2025-06-08T10:05:40,379   adding 'multiqc/modules/samtools/markdup.py'
2025-06-08T10:05:40,380   adding 'multiqc/modules/samtools/rmdup.py'
2025-06-08T10:05:40,382   adding 'multiqc/modules/samtools/samtools.py'
2025-06-08T10:05:40,384   adding 'multiqc/modules/samtools/stats.py'
2025-06-08T10:05:40,386   adding 'multiqc/modules/samtools/tests/__init__.py'
2025-06-08T10:05:40,387   adding 'multiqc/modules/samtools/tests/test_flagstat.py'
2025-06-08T10:05:40,389   adding 'multiqc/modules/sargasso/__init__.py'
2025-06-08T10:05:40,391   adding 'multiqc/modules/sargasso/sargasso.py'
2025-06-08T10:05:40,393   adding 'multiqc/modules/seqera_cli/__init__.py'
2025-06-08T10:05:40,395   adding 'multiqc/modules/seqera_cli/seqera_cli.py'
2025-06-08T10:05:40,397   adding 'multiqc/modules/sequali/__init__.py'
2025-06-08T10:05:40,401   adding 'multiqc/modules/sequali/sequali.py'
2025-06-08T10:05:40,403   adding 'multiqc/modules/seqwho/__init__.py'
2025-06-08T10:05:40,405   adding 'multiqc/modules/seqwho/seqwho.py'
2025-06-08T10:05:40,406   adding 'multiqc/modules/seqyclean/__init__.py'
2025-06-08T10:05:40,408   adding 'multiqc/modules/seqyclean/seqyclean.py'
2025-06-08T10:05:40,410   adding 'multiqc/modules/sexdeterrmine/__init__.py'
2025-06-08T10:05:40,412   adding 'multiqc/modules/sexdeterrmine/sexdeterrmine.py'
2025-06-08T10:05:40,413   adding 'multiqc/modules/sickle/__init__.py'
2025-06-08T10:05:40,415   adding 'multiqc/modules/sickle/sickle.py'
2025-06-08T10:05:40,417   adding 'multiqc/modules/skewer/__init__.py'
2025-06-08T10:05:40,418   adding 'multiqc/modules/skewer/skewer.py'
2025-06-08T10:05:40,420   adding 'multiqc/modules/slamdunk/__init__.py'
2025-06-08T10:05:40,423   adding 'multiqc/modules/slamdunk/slamdunk.py'
2025-06-08T10:05:40,424   adding 'multiqc/modules/snippy/__init__.py'
2025-06-08T10:05:40,426   adding 'multiqc/modules/snippy/snippy.py'
2025-06-08T10:05:40,428   adding 'multiqc/modules/snpeff/__init__.py'
2025-06-08T10:05:40,430   adding 'multiqc/modules/snpeff/snpeff.py'
2025-06-08T10:05:40,432   adding 'multiqc/modules/snpsplit/__init__.py'
2025-06-08T10:05:40,434   adding 'multiqc/modules/snpsplit/snpsplit.py'
2025-06-08T10:05:40,436   adding 'multiqc/modules/somalier/__init__.py'
2025-06-08T10:05:40,439   adding 'multiqc/modules/somalier/somalier.py'
2025-06-08T10:05:40,441   adding 'multiqc/modules/sortmerna/__init__.py'
2025-06-08T10:05:40,443   adding 'multiqc/modules/sortmerna/sortmerna.py'
2025-06-08T10:05:40,444   adding 'multiqc/modules/sourmash/__init__.py'
2025-06-08T10:05:40,446   adding 'multiqc/modules/sourmash/compare.py'
2025-06-08T10:05:40,448   adding 'multiqc/modules/sourmash/gather.py'
2025-06-08T10:05:40,449   adding 'multiqc/modules/sourmash/sourmash.py'
2025-06-08T10:05:40,451   adding 'multiqc/modules/spaceranger/__init__.py'
2025-06-08T10:05:40,453   adding 'multiqc/modules/spaceranger/count.py'
2025-06-08T10:05:40,454   adding 'multiqc/modules/spaceranger/spaceranger.py'
2025-06-08T10:05:40,456   adding 'multiqc/modules/spaceranger/utils.py'
2025-06-08T10:05:40,458   adding 'multiqc/modules/stacks/__init__.py'
2025-06-08T10:05:40,460   adding 'multiqc/modules/stacks/stacks.py'
2025-06-08T10:05:40,461   adding 'multiqc/modules/star/__init__.py'
2025-06-08T10:05:40,464   adding 'multiqc/modules/star/star.py'
2025-06-08T10:05:40,466   adding 'multiqc/modules/supernova/__init__.py'
2025-06-08T10:05:40,469   adding 'multiqc/modules/supernova/supernova.py'
2025-06-08T10:05:40,471   adding 'multiqc/modules/telseq/__init__.py'
2025-06-08T10:05:40,472   adding 'multiqc/modules/telseq/telseq.py'
2025-06-08T10:05:40,474   adding 'multiqc/modules/theta2/__init__.py'
2025-06-08T10:05:40,475   adding 'multiqc/modules/theta2/theta2.py'
2025-06-08T10:05:40,477   adding 'multiqc/modules/tophat/__init__.py'
2025-06-08T10:05:40,479   adding 'multiqc/modules/tophat/tophat.py'
2025-06-08T10:05:40,481   adding 'multiqc/modules/trimmomatic/__init__.py'
2025-06-08T10:05:40,483   adding 'multiqc/modules/trimmomatic/trimmomatic.py'
2025-06-08T10:05:40,484   adding 'multiqc/modules/truvari/__init__.py'
2025-06-08T10:05:40,486   adding 'multiqc/modules/truvari/truvari.py'
2025-06-08T10:05:40,488   adding 'multiqc/modules/umicollapse/__init__.py'
2025-06-08T10:05:40,490   adding 'multiqc/modules/umicollapse/umicollapse.py'
2025-06-08T10:05:40,492   adding 'multiqc/modules/umicollapse/tests/__init__.py'
2025-06-08T10:05:40,494   adding 'multiqc/modules/umicollapse/tests/test_umicollapse.py'
2025-06-08T10:05:40,495   adding 'multiqc/modules/umitools/__init__.py'
2025-06-08T10:05:40,498   adding 'multiqc/modules/umitools/umitools.py'
2025-06-08T10:05:40,500   adding 'multiqc/modules/umitools/tests/__init__.py'
2025-06-08T10:05:40,501   adding 'multiqc/modules/umitools/tests/test_umitools.py'
2025-06-08T10:05:40,503   adding 'multiqc/modules/varscan2/__init__.py'
2025-06-08T10:05:40,505   adding 'multiqc/modules/varscan2/varscan2.py'
2025-06-08T10:05:40,507   adding 'multiqc/modules/vcftools/__init__.py'
2025-06-08T10:05:40,508   adding 'multiqc/modules/vcftools/relatedness2.py'
2025-06-08T10:05:40,510   adding 'multiqc/modules/vcftools/tstv_by_count.py'
2025-06-08T10:05:40,511   adding 'multiqc/modules/vcftools/tstv_by_qual.py'
2025-06-08T10:05:40,513   adding 'multiqc/modules/vcftools/tstv_summary.py'
2025-06-08T10:05:40,514   adding 'multiqc/modules/vcftools/vcftools.py'
2025-06-08T10:05:40,516   adding 'multiqc/modules/vep/__init__.py'
2025-06-08T10:05:40,518   adding 'multiqc/modules/vep/vep.py'
2025-06-08T10:05:40,520   adding 'multiqc/modules/verifybamid/__init__.py'
2025-06-08T10:05:40,523   adding 'multiqc/modules/verifybamid/verifybamid.py'
2025-06-08T10:05:40,524   adding 'multiqc/modules/vg/__init__.py'
2025-06-08T10:05:40,527   adding 'multiqc/modules/vg/vg.py'
2025-06-08T10:05:40,528   adding 'multiqc/modules/whatshap/__init__.py'
2025-06-08T10:05:40,531   adding 'multiqc/modules/whatshap/whatshap.py'
2025-06-08T10:05:40,533   adding 'multiqc/modules/xengsort/__init__.py'
2025-06-08T10:05:40,534   adding 'multiqc/modules/xengsort/xengsort.py'
2025-06-08T10:05:40,536   adding 'multiqc/modules/xenome/__init__.py'
2025-06-08T10:05:40,538   adding 'multiqc/modules/xenome/xenome.py'
2025-06-08T10:05:40,540   adding 'multiqc/plots/__init__.py'
2025-06-08T10:05:40,545   adding 'multiqc/plots/bargraph.py'
2025-06-08T10:05:40,548   adding 'multiqc/plots/box.py'
2025-06-08T10:05:40,552   adding 'multiqc/plots/heatmap.py'
2025-06-08T10:05:40,557   adding 'multiqc/plots/linegraph.py'
2025-06-08T10:05:40,566   adding 'multiqc/plots/plot.py'
2025-06-08T10:05:40,569   adding 'multiqc/plots/scatter.py'
2025-06-08T10:05:40,571   adding 'multiqc/plots/table.py'
2025-06-08T10:05:40,578   adding 'multiqc/plots/table_object.py'
2025-06-08T10:05:40,580   adding 'multiqc/plots/utils.py'
2025-06-08T10:05:40,586   adding 'multiqc/plots/violin.py'
2025-06-08T10:05:40,588   adding 'multiqc/templates/__init__.py'
2025-06-08T10:05:40,590   adding 'multiqc/templates/default/__init__.py'
2025-06-08T10:05:40,591   adding 'multiqc/templates/default/base.html'
2025-06-08T10:05:40,593   adding 'multiqc/templates/default/content.html'
2025-06-08T10:05:40,594   adding 'multiqc/templates/default/foot.html'
2025-06-08T10:05:40,595   adding 'multiqc/templates/default/footer.html'
2025-06-08T10:05:40,597   adding 'multiqc/templates/default/general_stats.html'
2025-06-08T10:05:40,598   adding 'multiqc/templates/default/head.html'
2025-06-08T10:05:40,600   adding 'multiqc/templates/default/header.html'
2025-06-08T10:05:40,601   adding 'multiqc/templates/default/includes.html'
2025-06-08T10:05:40,603   adding 'multiqc/templates/default/nav.html'
2025-06-08T10:05:40,606   adding 'multiqc/templates/default/toolbox.html'
2025-06-08T10:05:40,617   adding 'multiqc/templates/default/assets/css/bootstrap.min.css'
2025-06-08T10:05:40,621   adding 'multiqc/templates/default/assets/css/default_multiqc.css'
2025-06-08T10:05:40,623   adding 'multiqc/templates/default/assets/css/jquery.toast.css'
2025-06-08T10:05:40,626   adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.eot'
2025-06-08T10:05:40,647   adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.svg'
2025-06-08T10:05:40,655   adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.ttf'
2025-06-08T10:05:40,658   adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff'
2025-06-08T10:05:40,661   adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff2'
2025-06-08T10:05:40,663   adding 'multiqc/templates/default/assets/img/MultiQC_logo.png'
2025-06-08T10:05:40,665   adding 'multiqc/templates/default/assets/img/MultiQC_logo_dark.svg'
2025-06-08T10:05:40,666   adding 'multiqc/templates/default/assets/img/favicon-16x16.png'
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2025-06-08T10:05:40,671   adding 'multiqc/templates/default/assets/img/seqera_logo.png'
2025-06-08T10:05:40,673   adding 'multiqc/templates/default/assets/img/seqera_logo_mono.png'
2025-06-08T10:05:40,676   adding 'multiqc/templates/default/assets/js/ai-helpers.js'
2025-06-08T10:05:40,679   adding 'multiqc/templates/default/assets/js/ai.js'
2025-06-08T10:05:40,680   adding 'multiqc/templates/default/assets/js/decompress.js'
2025-06-08T10:05:40,682   adding 'multiqc/templates/default/assets/js/flat.js'
2025-06-08T10:05:40,683   adding 'multiqc/templates/default/assets/js/multiqc.js'
2025-06-08T10:05:40,686   adding 'multiqc/templates/default/assets/js/plotting.js'
2025-06-08T10:05:40,687   adding 'multiqc/templates/default/assets/js/render.js'
2025-06-08T10:05:40,690   adding 'multiqc/templates/default/assets/js/tables.js'
2025-06-08T10:05:40,700   adding 'multiqc/templates/default/assets/js/toolbox.js'
2025-06-08T10:05:40,703   adding 'multiqc/templates/default/assets/js/packages/FileSaver.min.js'
2025-06-08T10:05:40,707   adding 'multiqc/templates/default/assets/js/packages/bootstrap.min.js'
2025-06-08T10:05:40,720   adding 'multiqc/templates/default/assets/js/packages/jquery-3.1.1.min.js'
2025-06-08T10:05:40,725   adding 'multiqc/templates/default/assets/js/packages/jquery-ui.min.js'
2025-06-08T10:05:40,731   adding 'multiqc/templates/default/assets/js/packages/jquery.tablesorter.min.js'
2025-06-08T10:05:40,732   adding 'multiqc/templates/default/assets/js/packages/jquery.toast.min.js'
2025-06-08T10:05:40,744   adding 'multiqc/templates/default/assets/js/packages/jszip.min.js'
2025-06-08T10:05:40,747   adding 'multiqc/templates/default/assets/js/packages/pako_inflate.min.js'
2025-06-08T10:05:41,756   adding 'multiqc/templates/default/assets/js/packages/plotly-2.27.0.js'
2025-06-08T10:05:42,246   adding 'multiqc/templates/default/assets/js/packages/plotly-2.27.0.min.js'
2025-06-08T10:05:42,277   adding 'multiqc/templates/default/assets/js/packages/showdown.min.js'
2025-06-08T10:05:42,280   adding 'multiqc/templates/default/assets/js/plots/bar.js'
2025-06-08T10:05:42,281   adding 'multiqc/templates/default/assets/js/plots/box.js'
2025-06-08T10:05:42,283   adding 'multiqc/templates/default/assets/js/plots/heatmap.js'
2025-06-08T10:05:42,284   adding 'multiqc/templates/default/assets/js/plots/line.js'
2025-06-08T10:05:42,286   adding 'multiqc/templates/default/assets/js/plots/scatter.js'
2025-06-08T10:05:42,288   adding 'multiqc/templates/default/assets/js/plots/violin.js'
2025-06-08T10:05:42,290   adding 'multiqc/templates/gathered/__init__.py'
2025-06-08T10:05:42,292   adding 'multiqc/templates/gathered/content.html'
2025-06-08T10:05:42,293   adding 'multiqc/templates/gathered/nav.html'
2025-06-08T10:05:42,295   adding 'multiqc/templates/geo/__init__.py'
2025-06-08T10:05:42,296   adding 'multiqc/templates/geo/includes.html'
2025-06-08T10:05:42,307   adding 'multiqc/templates/geo/assets/css/bootstrap.min.css'
2025-06-08T10:05:42,310   adding 'multiqc/templates/geo/assets/img/emailme.gif'
2025-06-08T10:05:42,316   adding 'multiqc/templates/geo/assets/img/flames.gif'
2025-06-08T10:05:42,318   adding 'multiqc/templates/geo/assets/img/glyphicons-halflings-white.png'
2025-06-08T10:05:42,320   adding 'multiqc/templates/geo/assets/img/glyphicons-halflings.png'
2025-06-08T10:05:42,324   adding 'multiqc/templates/geo/assets/img/hot.gif'
2025-06-08T10:05:42,334   adding 'multiqc/templates/geo/assets/img/mchammer.gif'
2025-06-08T10:05:42,338   adding 'multiqc/templates/geo/assets/img/microfab.gif'
2025-06-08T10:05:42,339   adding 'multiqc/templates/geo/assets/img/new.gif'
2025-06-08T10:05:42,341   adding 'multiqc/templates/geo/assets/img/new2.gif'
2025-06-08T10:05:42,343   adding 'multiqc/templates/geo/assets/img/progress.gif'
2025-06-08T10:05:42,344   adding 'multiqc/templates/geo/assets/img/rainbow.gif'
2025-06-08T10:05:42,346   adding 'multiqc/templates/geo/assets/img/stars.gif'
2025-06-08T10:05:42,348   adding 'multiqc/templates/sections/__init__.py'
2025-06-08T10:05:42,350   adding 'multiqc/templates/sections/content.html'
2025-06-08T10:05:42,352   adding 'multiqc/templates/simple/__init__.py'
2025-06-08T10:05:42,353   adding 'multiqc/templates/simple/foot.html'
2025-06-08T10:05:42,354   adding 'multiqc/templates/simple/footer.html'
2025-06-08T10:05:42,355   adding 'multiqc/templates/simple/header.html'
2025-06-08T10:05:42,357   adding 'multiqc/templates/simple/includes.html'
2025-06-08T10:05:42,358   adding 'multiqc/templates/simple/nav.html'
2025-06-08T10:05:42,359   adding 'multiqc/templates/simple/toolbox.html'
2025-06-08T10:05:42,361   adding 'multiqc/utils/config.py'
2025-06-08T10:05:42,365   adding 'multiqc/utils/config_schema.json'
2025-06-08T10:05:42,367   adding 'multiqc/utils/config_schema.py'
2025-06-08T10:05:42,369   adding 'multiqc/utils/megaqc.py'
2025-06-08T10:05:42,372   adding 'multiqc/utils/mqc_colour.py'
2025-06-08T10:05:42,373   adding 'multiqc/utils/pyaml_env.py'
2025-06-08T10:05:42,374   adding 'multiqc/utils/report.py'
2025-06-08T10:05:42,376   adding 'multiqc/utils/testing.py'
2025-06-08T10:05:42,378   adding 'multiqc/utils/util_functions.py'
2025-06-08T10:05:42,385   adding 'multiqc-1.29.dist-info/licenses/LICENSE'
2025-06-08T10:05:42,393   adding 'multiqc-1.29.dist-info/METADATA'
2025-06-08T10:05:42,394   adding 'multiqc-1.29.dist-info/WHEEL'
2025-06-08T10:05:42,396   adding 'multiqc-1.29.dist-info/entry_points.txt'
2025-06-08T10:05:42,397   adding 'multiqc-1.29.dist-info/top_level.txt'
2025-06-08T10:05:42,407   adding 'multiqc-1.29.dist-info/RECORD'
2025-06-08T10:05:42,474   removing build/bdist.linux-armv7l/wheel
2025-06-08T10:05:42,855   Building wheel for multiqc (pyproject.toml): finished with status 'done'
2025-06-08T10:05:42,973   Created wheel for multiqc: filename=multiqc-1.29-py3-none-any.whl size=4742092 sha256=f615e2424250105b3865bd9a561c465ac6e748e99a6aff4c41b29924520d4dd7
2025-06-08T10:05:42,974   Stored in directory: /tmp/pip-ephem-wheel-cache-42o7cvfy/wheels/81/e4/78/85052f975201f82f66bd6e404092ccacdb079817d69bd0794b
2025-06-08T10:05:43,031 Successfully built multiqc
2025-06-08T10:05:43,159 Removed build tracker: '/tmp/pip-build-tracker-rjkabn4b'