2025-06-10T10:35:49,323 Created temporary directory: /tmp/pip-build-tracker-dcwdthsz 2025-06-10T10:35:49,324 Initialized build tracking at /tmp/pip-build-tracker-dcwdthsz 2025-06-10T10:35:49,325 Created build tracker: /tmp/pip-build-tracker-dcwdthsz 2025-06-10T10:35:49,325 Entered build tracker: /tmp/pip-build-tracker-dcwdthsz 2025-06-10T10:35:49,326 Created temporary directory: /tmp/pip-wheel-riw67c40 2025-06-10T10:35:49,331 Created temporary directory: /tmp/pip-ephem-wheel-cache-wnevlm9h 2025-06-10T10:35:49,384 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-06-10T10:35:49,386 2 location(s) to search for versions of biorefineries: 2025-06-10T10:35:49,386 * https://pypi.org/simple/biorefineries/ 2025-06-10T10:35:49,386 * https://www.piwheels.org/simple/biorefineries/ 2025-06-10T10:35:49,387 Fetching project page and analyzing links: https://pypi.org/simple/biorefineries/ 2025-06-10T10:35:49,388 Getting page https://pypi.org/simple/biorefineries/ 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https://files.pythonhosted.org/packages/54/ad/b1d223661c615f621ccf9d96d56e2cac4aff237ab7b67df89de87e97856a/biorefineries-2.24.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.24.0 2025-06-10T10:35:49,742 Found link https://files.pythonhosted.org/packages/cb/cd/2c6590a3707b128e2e18f88e5e8bafc11f66c696b13cd48a8d3904c1a7e9/biorefineries-2.25.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.25.0 2025-06-10T10:35:49,742 Found link https://files.pythonhosted.org/packages/0a/fb/ab19a7d509067bd1a3e6b5a3206353f76a20d0560a993bcc54f3834271d1/biorefineries-2.26.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.26.0 2025-06-10T10:35:49,743 Found link https://files.pythonhosted.org/packages/aa/11/6b1b4699e6f73e913ad9aba24dcc47b4bf71326f89560a9991da01d2ce2a/biorefineries-2.26.1.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.26.1 2025-06-10T10:35:49,744 Found link https://files.pythonhosted.org/packages/bd/27/da932b8ccd134a8cf91e3255a895f0e7b4ca5be730f4f647aaaf5707b129/biorefineries-2.26.2.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.26.2 2025-06-10T10:35:49,745 Found link https://files.pythonhosted.org/packages/a1/be/361e29090e4c191970a776e0825984963b7af2af3b3e187478dfa7fd1aeb/biorefineries-2.26.3.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.26.3 2025-06-10T10:35:49,745 Found link https://files.pythonhosted.org/packages/8c/93/3f84da15e7cae7dc3ea52b9aecbc04ec3c0a94a38a1dd37fb5ee19db62d5/biorefineries-2.27.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.27.0 2025-06-10T10:35:49,746 Found link https://files.pythonhosted.org/packages/fc/5b/dfbd1b69f7a3973cab60cb6b5956beea3b592f4dc52dfd5e22debaaa1eb4/biorefineries-2.28.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.28.0 2025-06-10T10:35:49,746 Found link https://files.pythonhosted.org/packages/a0/61/1dc078b2a9edb2aa6bbb811ef0284a2ce28ede5c47e4cdfa2a91e2af8602/biorefineries-2.29.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.29.0 2025-06-10T10:35:49,747 Found link https://files.pythonhosted.org/packages/43/d5/88b9e32b0aca0f72eeaa244a249a3506e535fac5aad149d9f07095eaf234/biorefineries-2.30.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.30.0 2025-06-10T10:35:49,748 Found link https://files.pythonhosted.org/packages/98/98/25db2013c0782c05b56be59643001bb6eb957774aab20bcde13c565dd393/biorefineries-2.31.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.31.0 2025-06-10T10:35:49,749 Found link https://files.pythonhosted.org/packages/e0/73/94787709c74a6024177a42f16af9934dec2d00a01fd8248e2c0783e5c4eb/biorefineries-2.32.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.32.0 2025-06-10T10:35:49,749 Found link https://files.pythonhosted.org/packages/00/b3/a660dd043e4da0555f31eb963f6db57871d72ea292e21ac069e07e08261a/biorefineries-2.32.1.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.32.1 2025-06-10T10:35:49,750 Found link https://files.pythonhosted.org/packages/f5/df/e2806eb3a5d1cc2fce1d47b9eee568041b7ba168e5f79a254e40bc31d567/biorefineries-2.32.2.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.32.2 2025-06-10T10:35:49,751 Found link https://files.pythonhosted.org/packages/1a/01/a509b9fa25b473c4946e5d0e473ac9e8487155fcde435faf732381059ed3/biorefineries-2.34.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.0 2025-06-10T10:35:49,752 Found link https://files.pythonhosted.org/packages/88/99/a281c21d0fa3f18a3f0b1305ef0d8f37af2007be26cfaa2fdbd18f0e38c4/biorefineries-2.34.1.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.1 2025-06-10T10:35:49,752 Found link https://files.pythonhosted.org/packages/a5/7c/75c89a881b44fd613e1a726018ff2e990c7cd004b99c373e001b22d3e7da/biorefineries-2.34.2.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.2 2025-06-10T10:35:49,753 Found link https://files.pythonhosted.org/packages/d0/18/21936150b0aaced289ca0ce66b8c1849aea0e6b697c37c30366c4544bc3c/biorefineries-2.34.3.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.3 2025-06-10T10:35:49,754 Found link https://files.pythonhosted.org/packages/eb/30/282559d3858fee72e9ac2f0243c9a6e2d6107c452cc0a2a81c800c08f0da/biorefineries-2.34.4.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.4 2025-06-10T10:35:49,755 Found link https://files.pythonhosted.org/packages/7f/a2/965957e84893d444df2ac691b41796b08a90c5135226d76b2199f6cac473/biorefineries-2.34.5.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.5 2025-06-10T10:35:49,755 Found link https://files.pythonhosted.org/packages/de/e5/75d96878c9156b59227c4b9587466d58b879f91b48ae509ed2d44a604f58/biorefineries-2.34.6.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.6 2025-06-10T10:35:49,756 Found link https://files.pythonhosted.org/packages/dc/f0/7645088da65009a981a08e0d0c7e21342e4fa9e7a1ab0392ed25e88c63a7/biorefineries-2.34.7.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.7 2025-06-10T10:35:49,757 Found link https://files.pythonhosted.org/packages/24/6f/2fbd894ecce9381baa00fa7d057bbc742b1665d759149b70b6a41ca8b045/biorefineries-2.34.8.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.8 2025-06-10T10:35:49,757 Found link https://files.pythonhosted.org/packages/e0/fb/df23010230202a6caf5a966342497ab01795297ce3ee4212b15143e8c5ce/biorefineries-2.34.9.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.9 2025-06-10T10:35:49,758 Found link https://files.pythonhosted.org/packages/90/35/ed933b7d09f1f4b9de3c0f16e1092516022744ca6240c828e86d15988fc4/biorefineries-2.34.10.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.10 2025-06-10T10:35:49,759 Fetching project page and analyzing links: https://www.piwheels.org/simple/biorefineries/ 2025-06-10T10:35:49,760 Getting page https://www.piwheels.org/simple/biorefineries/ 2025-06-10T10:35:49,761 Found index url https://www.piwheels.org/simple/ 2025-06-10T10:35:49,929 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biorefineries/ 2025-06-10T10:35:50,583 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biorefineries/ 2025-06-10T10:35:51,741 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biorefineries/ 2025-06-10T10:35:53,908 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biorefineries/ 2025-06-10T10:35:58,077 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biorefineries/ 2025-06-10T10:35:58,236 Could not fetch URL https://www.piwheels.org/simple/biorefineries/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/biorefineries/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-06-10T10:35:58,238 Skipping link: not a file: https://www.piwheels.org/simple/biorefineries/ 2025-06-10T10:35:58,239 Skipping link: not a file: https://pypi.org/simple/biorefineries/ 2025-06-10T10:35:58,274 Given no hashes to check 1 links for project 'biorefineries': discarding no candidates 2025-06-10T10:35:58,276 Collecting biorefineries==2.34.7 2025-06-10T10:35:58,279 Created temporary directory: /tmp/pip-unpack-s494xywq 2025-06-10T10:35:58,775 Downloading biorefineries-2.34.7.tar.gz (28.2 MB) 2025-06-10T10:36:05,491 Added biorefineries==2.34.7 from https://files.pythonhosted.org/packages/dc/f0/7645088da65009a981a08e0d0c7e21342e4fa9e7a1ab0392ed25e88c63a7/biorefineries-2.34.7.tar.gz to build tracker '/tmp/pip-build-tracker-dcwdthsz' 2025-06-10T10:36:05,493 Running setup.py (path:/tmp/pip-wheel-riw67c40/biorefineries_1a25435a9e084d55b2fd5ff4990dd93f/setup.py) egg_info for package biorefineries 2025-06-10T10:36:05,494 Created temporary directory: /tmp/pip-pip-egg-info-tkesmkt9 2025-06-10T10:36:05,495 Preparing metadata (setup.py): started 2025-06-10T10:36:05,496 Running command python setup.py egg_info 2025-06-10T10:36:06,391 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-06-10T10:36:06,391 !! 2025-06-10T10:36:06,392 ******************************************************************************** 2025-06-10T10:36:06,393 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-06-10T10:36:06,394 License :: OSI Approved :: MIT License 2025-06-10T10:36:06,395 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-06-10T10:36:06,395 ******************************************************************************** 2025-06-10T10:36:06,396 !! 2025-06-10T10:36:06,397 self._finalize_license_expression() 2025-06-10T10:36:06,422 running egg_info 2025-06-10T10:36:06,450 creating /tmp/pip-pip-egg-info-tkesmkt9/biorefineries.egg-info 2025-06-10T10:36:06,451 writing /tmp/pip-pip-egg-info-tkesmkt9/biorefineries.egg-info/PKG-INFO 2025-06-10T10:36:06,455 writing dependency_links to /tmp/pip-pip-egg-info-tkesmkt9/biorefineries.egg-info/dependency_links.txt 2025-06-10T10:36:06,457 writing requirements to /tmp/pip-pip-egg-info-tkesmkt9/biorefineries.egg-info/requires.txt 2025-06-10T10:36:06,458 writing top-level names to /tmp/pip-pip-egg-info-tkesmkt9/biorefineries.egg-info/top_level.txt 2025-06-10T10:36:06,459 writing manifest file '/tmp/pip-pip-egg-info-tkesmkt9/biorefineries.egg-info/SOURCES.txt' 2025-06-10T10:36:06,595 reading manifest file '/tmp/pip-pip-egg-info-tkesmkt9/biorefineries.egg-info/SOURCES.txt' 2025-06-10T10:36:06,596 adding license file 'LICENSE.txt' 2025-06-10T10:36:06,608 writing manifest file '/tmp/pip-pip-egg-info-tkesmkt9/biorefineries.egg-info/SOURCES.txt' 2025-06-10T10:36:06,939 Preparing metadata (setup.py): finished with status 'done' 2025-06-10T10:36:06,944 Source in /tmp/pip-wheel-riw67c40/biorefineries_1a25435a9e084d55b2fd5ff4990dd93f has version 2.34.7, which satisfies requirement biorefineries==2.34.7 from https://files.pythonhosted.org/packages/dc/f0/7645088da65009a981a08e0d0c7e21342e4fa9e7a1ab0392ed25e88c63a7/biorefineries-2.34.7.tar.gz 2025-06-10T10:36:06,945 Removed biorefineries==2.34.7 from https://files.pythonhosted.org/packages/dc/f0/7645088da65009a981a08e0d0c7e21342e4fa9e7a1ab0392ed25e88c63a7/biorefineries-2.34.7.tar.gz from build tracker '/tmp/pip-build-tracker-dcwdthsz' 2025-06-10T10:36:06,952 Created temporary directory: /tmp/pip-unpack-wo0suydc 2025-06-10T10:36:06,953 Created temporary directory: /tmp/pip-unpack-b7ilvdpl 2025-06-10T10:36:06,953 Building wheels for collected packages: biorefineries 2025-06-10T10:36:06,958 Created temporary directory: /tmp/pip-wheel-krudc4lm 2025-06-10T10:36:06,959 DEPRECATION: Building 'biorefineries' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'biorefineries'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-06-10T10:36:06,960 Building wheel for biorefineries (setup.py): started 2025-06-10T10:36:06,962 Destination directory: /tmp/pip-wheel-krudc4lm 2025-06-10T10:36:06,962 Running command python setup.py bdist_wheel 2025-06-10T10:36:07,816 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-06-10T10:36:07,817 !! 2025-06-10T10:36:07,818 ******************************************************************************** 2025-06-10T10:36:07,818 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-06-10T10:36:07,819 License :: OSI Approved :: MIT License 2025-06-10T10:36:07,820 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-06-10T10:36:07,821 ******************************************************************************** 2025-06-10T10:36:07,822 !! 2025-06-10T10:36:07,822 self._finalize_license_expression() 2025-06-10T10:36:07,823 running bdist_wheel 2025-06-10T10:36:07,964 running build 2025-06-10T10:36:07,965 running build_py 2025-06-10T10:36:07,996 creating build/lib/biorefineries 2025-06-10T10:36:07,999 copying biorefineries/__init__.py -> build/lib/biorefineries 2025-06-10T10:36:08,033 creating build/lib/biorefineries/cane 2025-06-10T10:36:08,034 copying biorefineries/cane/uncertainty_plots.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,039 copying biorefineries/cane/tables.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,042 copying biorefineries/cane/__init__.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,044 copying biorefineries/cane/units.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,047 copying biorefineries/cane/oil_extraction.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,050 copying biorefineries/cane/feature_mockups.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,053 copying biorefineries/cane/rename_soon.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,056 copying biorefineries/cane/results.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,059 copying biorefineries/cane/composition.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,062 copying biorefineries/cane/README.md -> build/lib/biorefineries/cane 2025-06-10T10:36:08,065 copying biorefineries/cane/chemicals.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,068 copying biorefineries/cane/process_settings.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,070 copying biorefineries/cane/configurations_biomass_yield_analysis.npy -> build/lib/biorefineries/cane 2025-06-10T10:36:08,074 copying biorefineries/cane/evaluation.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,077 copying biorefineries/cane/streams.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,080 copying biorefineries/cane/biorefinery.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,084 copying biorefineries/cane/parse_configuration.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,087 copying biorefineries/cane/contour_plots.py -> build/lib/biorefineries/cane 2025-06-10T10:36:08,090 creating build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,091 copying biorefineries/cane/systems/fermentation.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,095 copying biorefineries/cane/systems/__init__.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,097 copying biorefineries/cane/systems/biodiesel_actag.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,100 copying biorefineries/cane/systems/lipidcane.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,103 copying biorefineries/cane/systems/biodiesel.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,106 copying biorefineries/cane/systems/juicing.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,109 copying biorefineries/cane/systems/bagasse.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,112 copying biorefineries/cane/systems/pretreatment.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,114 copying biorefineries/cane/systems/cellulosic_biodiesel.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,117 copying biorefineries/cane/systems/cellulosic_biodiesel_actag.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,120 copying biorefineries/cane/systems/lipid_extraction.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,123 copying biorefineries/cane/systems/sugar.py -> build/lib/biorefineries/cane/systems 2025-06-10T10:36:08,125 creating build/lib/biorefineries/cane/systems/oilcane 2025-06-10T10:36:08,126 copying biorefineries/cane/systems/oilcane/cellulosic_biodiesel_ethanol.py -> build/lib/biorefineries/cane/systems/oilcane 2025-06-10T10:36:08,129 copying biorefineries/cane/systems/oilcane/crude_oil_ethanol.py -> build/lib/biorefineries/cane/systems/oilcane 2025-06-10T10:36:08,132 copying biorefineries/cane/systems/oilcane/__init__.py -> build/lib/biorefineries/cane/systems/oilcane 2025-06-10T10:36:08,134 copying biorefineries/cane/systems/oilcane/cellulosic_crude_oil_ethanol.py -> build/lib/biorefineries/cane/systems/oilcane 2025-06-10T10:36:08,136 copying biorefineries/cane/systems/oilcane/biodiesel_ethanol.py -> build/lib/biorefineries/cane/systems/oilcane 2025-06-10T10:36:08,139 creating build/lib/biorefineries/cane/systems/sugarcane 2025-06-10T10:36:08,140 copying biorefineries/cane/systems/sugarcane/sugar_ethanol.py -> build/lib/biorefineries/cane/systems/sugarcane 2025-06-10T10:36:08,143 copying biorefineries/cane/systems/sugarcane/__init__.py -> build/lib/biorefineries/cane/systems/sugarcane 2025-06-10T10:36:08,145 copying biorefineries/cane/systems/sugarcane/cellulosic_ethanol.py -> build/lib/biorefineries/cane/systems/sugarcane 2025-06-10T10:36:08,148 copying biorefineries/cane/systems/sugarcane/ethanol.py -> build/lib/biorefineries/cane/systems/sugarcane 2025-06-10T10:36:08,151 creating build/lib/biorefineries/milk 2025-06-10T10:36:08,152 copying biorefineries/milk/systems.py -> build/lib/biorefineries/milk 2025-06-10T10:36:08,154 copying biorefineries/milk/__init__.py -> build/lib/biorefineries/milk 2025-06-10T10:36:08,157 copying biorefineries/milk/units.py -> build/lib/biorefineries/milk 2025-06-10T10:36:08,159 copying biorefineries/milk/plots.py -> build/lib/biorefineries/milk 2025-06-10T10:36:08,161 copying biorefineries/milk/data.py -> build/lib/biorefineries/milk 2025-06-10T10:36:08,163 copying biorefineries/milk/tests.py -> build/lib/biorefineries/milk 2025-06-10T10:36:08,166 copying biorefineries/milk/uncertainty.py -> build/lib/biorefineries/milk 2025-06-10T10:36:08,169 copying biorefineries/milk/README.md -> build/lib/biorefineries/milk 2025-06-10T10:36:08,171 copying biorefineries/milk/chemicals.py -> build/lib/biorefineries/milk 2025-06-10T10:36:08,174 copying biorefineries/milk/process_settings.py -> build/lib/biorefineries/milk 2025-06-10T10:36:08,176 copying biorefineries/milk/GalactoOligoSaccharideProcess.xlsx -> build/lib/biorefineries/milk 2025-06-10T10:36:08,206 copying biorefineries/milk/biorefinery.py -> build/lib/biorefineries/milk 2025-06-10T10:36:08,210 creating build/lib/biorefineries/milk/images 2025-06-10T10:36:08,211 copying biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.svg -> build/lib/biorefineries/milk/images 2025-06-10T10:36:08,215 copying biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.svg -> build/lib/biorefineries/milk/images 2025-06-10T10:36:08,220 copying biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.png -> build/lib/biorefineries/milk/images 2025-06-10T10:36:08,230 copying biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.png -> build/lib/biorefineries/milk/images 2025-06-10T10:36:08,243 copying biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.png -> build/lib/biorefineries/milk/images 2025-06-10T10:36:08,257 copying biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.svg -> build/lib/biorefineries/milk/images 2025-06-10T10:36:08,262 creating build/lib/biorefineries/milk/results 2025-06-10T10:36:08,263 copying biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate_GlucoseMedia.npy -> build/lib/biorefineries/milk/results 2025-06-10T10:36:08,266 copying biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate.npy -> build/lib/biorefineries/milk/results 2025-06-10T10:36:08,269 copying biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_GlucoseMedia.npy -> build/lib/biorefineries/milk/results 2025-06-10T10:36:08,272 creating build/lib/biorefineries/cane/data 2025-06-10T10:36:08,273 copying biorefineries/cane/data/price_distributions_2023.py -> build/lib/biorefineries/cane/data 2025-06-10T10:36:08,276 copying biorefineries/cane/data/cane_composition_data_full.xlsx -> build/lib/biorefineries/cane/data 2025-06-10T10:36:08,280 copying biorefineries/cane/data/price_distributions_2022.py -> build/lib/biorefineries/cane/data 2025-06-10T10:36:08,283 copying biorefineries/cane/data/lca_characterization_factors.py -> build/lib/biorefineries/cane/data 2025-06-10T10:36:08,285 copying biorefineries/cane/data/RIN_prices_2023.csv -> build/lib/biorefineries/cane/data 2025-06-10T10:36:08,294 copying biorefineries/cane/data/RIN_prices_2022.csv -> build/lib/biorefineries/cane/data 2025-06-10T10:36:08,306 copying biorefineries/cane/data/cane_composition_data.xlsx -> build/lib/biorefineries/cane/data 2025-06-10T10:36:08,309 copying biorefineries/cane/data/microbial_oil_baseline.py -> build/lib/biorefineries/cane/data 2025-06-10T10:36:08,311 creating build/lib/biorefineries/cellulosic 2025-06-10T10:36:08,313 copying biorefineries/cellulosic/__init__.py -> build/lib/biorefineries/cellulosic 2025-06-10T10:36:08,315 copying biorefineries/cellulosic/units.py -> build/lib/biorefineries/cellulosic 2025-06-10T10:36:08,319 copying biorefineries/cellulosic/chemicals.py -> build/lib/biorefineries/cellulosic 2025-06-10T10:36:08,322 copying biorefineries/cellulosic/process_settings.py -> build/lib/biorefineries/cellulosic 2025-06-10T10:36:08,324 copying biorefineries/cellulosic/streams.py -> build/lib/biorefineries/cellulosic 2025-06-10T10:36:08,327 copying biorefineries/cellulosic/biorefinery.py -> build/lib/biorefineries/cellulosic 2025-06-10T10:36:08,330 creating build/lib/biorefineries/cellulosic/systems 2025-06-10T10:36:08,331 copying biorefineries/cellulosic/systems/__init__.py -> build/lib/biorefineries/cellulosic/systems 2025-06-10T10:36:08,333 copying biorefineries/cellulosic/systems/cellulosic_ethanol.py -> build/lib/biorefineries/cellulosic/systems 2025-06-10T10:36:08,336 creating build/lib/biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:08,337 copying biorefineries/cellulosic/systems/fermentation/__init__.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:08,340 copying biorefineries/cellulosic/systems/fermentation/general_interface.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:08,343 copying biorefineries/cellulosic/systems/fermentation/integrated_bioprocess.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:08,346 copying biorefineries/cellulosic/systems/fermentation/saccharification.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:08,348 copying biorefineries/cellulosic/systems/fermentation/cofermentation.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:08,351 copying biorefineries/cellulosic/systems/fermentation/simultaneous_saccharification_cofermentation.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:08,354 creating build/lib/biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:08,355 copying biorefineries/cellulosic/systems/pretreatment/dilute_acid.py -> build/lib/biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:08,358 copying biorefineries/cellulosic/systems/pretreatment/__init__.py -> build/lib/biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:08,360 copying biorefineries/cellulosic/systems/pretreatment/hot_water.py -> build/lib/biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:08,363 copying biorefineries/cellulosic/systems/pretreatment/alkaline.py -> build/lib/biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:08,365 copying biorefineries/cellulosic/systems/pretreatment/ammonia_fiber_expansion.py -> build/lib/biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:08,368 creating build/lib/biorefineries/ethanol 2025-06-10T10:36:08,369 copying biorefineries/ethanol/systems.py -> build/lib/biorefineries/ethanol 2025-06-10T10:36:08,372 copying biorefineries/ethanol/__init__.py -> build/lib/biorefineries/ethanol 2025-06-10T10:36:08,374 copying biorefineries/ethanol/streams.py -> build/lib/biorefineries/ethanol 2025-06-10T10:36:08,376 creating build/lib/biorefineries/biodiesel 2025-06-10T10:36:08,378 copying biorefineries/biodiesel/systems.py -> build/lib/biorefineries/biodiesel 2025-06-10T10:36:08,381 copying biorefineries/biodiesel/__init__.py -> build/lib/biorefineries/biodiesel 2025-06-10T10:36:08,383 copying biorefineries/biodiesel/streams.py -> build/lib/biorefineries/biodiesel 2025-06-10T10:36:08,386 creating build/lib/biorefineries/biodiesel/units 2025-06-10T10:36:08,387 copying biorefineries/biodiesel/units/__init__.py -> build/lib/biorefineries/biodiesel/units 2025-06-10T10:36:08,389 copying biorefineries/biodiesel/units/transesterification.py -> build/lib/biorefineries/biodiesel/units 2025-06-10T10:36:08,392 copying biorefineries/biodiesel/units/skimming_tank.py -> build/lib/biorefineries/biodiesel/units 2025-06-10T10:36:08,394 copying biorefineries/biodiesel/units/glycerolysis_reactor.py -> build/lib/biorefineries/biodiesel/units 2025-06-10T10:36:08,397 creating build/lib/biorefineries/tea 2025-06-10T10:36:08,398 copying biorefineries/tea/__init__.py -> build/lib/biorefineries/tea 2025-06-10T10:36:08,400 copying biorefineries/tea/cellulosic_ethanol_tea.py -> build/lib/biorefineries/tea 2025-06-10T10:36:08,403 copying biorefineries/tea/conventional_ethanol_tea.py -> build/lib/biorefineries/tea 2025-06-10T10:36:08,406 creating build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,407 copying biorefineries/lipidcane/_feedstock_analysis.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,410 copying biorefineries/lipidcane/_process_settings.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,412 copying biorefineries/lipidcane/_tea.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,415 copying biorefineries/lipidcane/__init__.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,417 copying biorefineries/lipidcane/README.rst -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,420 copying biorefineries/lipidcane/_system.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,422 copying biorefineries/lipidcane/_webapp_model.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,425 copying biorefineries/lipidcane/_plot_uncertainty.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,429 copying biorefineries/lipidcane/_chemicals.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,431 copying biorefineries/lipidcane/sankey_plot.ipynb -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,505 copying biorefineries/lipidcane/model.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,508 copying biorefineries/lipidcane/_analysis.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,511 copying biorefineries/lipidcane/_plot_spearman.py -> build/lib/biorefineries/lipidcane 2025-06-10T10:36:08,513 creating build/lib/biorefineries/oilcane 2025-06-10T10:36:08,514 copying biorefineries/oilcane/_uncertainty_plots.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,518 copying biorefineries/oilcane/lca_benchmarks.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,520 copying biorefineries/oilcane/systems.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,522 copying biorefineries/oilcane/_tea.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,524 copying biorefineries/oilcane/__init__.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,526 copying biorefineries/oilcane/_parse_configuration.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,529 copying biorefineries/oilcane/units.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,531 copying biorefineries/oilcane/sankey_energy.ipynb -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,609 copying biorefineries/oilcane/_evaluation.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,612 copying biorefineries/oilcane/README.md -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,615 copying biorefineries/oilcane/_line_plots.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,618 copying biorefineries/oilcane/utils.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,620 copying biorefineries/oilcane/_chemicals.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,623 copying biorefineries/oilcane/sankey_plot.ipynb -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,627 copying biorefineries/oilcane/webapp_model.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,629 copying biorefineries/oilcane/_tables.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,632 copying biorefineries/oilcane/_feature_mockups.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,634 copying biorefineries/oilcane/_contour_plots.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,637 copying biorefineries/oilcane/_load_data.py -> build/lib/biorefineries/oilcane 2025-06-10T10:36:08,640 creating build/lib/biorefineries/cornstover 2025-06-10T10:36:08,641 copying biorefineries/cornstover/_process_settings.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,643 copying biorefineries/cornstover/systems.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,646 copying biorefineries/cornstover/_tea.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,648 copying biorefineries/cornstover/__init__.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,650 copying biorefineries/cornstover/README.rst -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,653 copying biorefineries/cornstover/units.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,655 copying biorefineries/cornstover/_sankey.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,658 copying biorefineries/cornstover/_plot_uncertainty.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,660 copying biorefineries/cornstover/_chemicals.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,663 copying biorefineries/cornstover/model.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,665 copying biorefineries/cornstover/webapp_model.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,668 copying biorefineries/cornstover/_analysis.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,670 copying biorefineries/cornstover/_plot_bars.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,673 copying biorefineries/cornstover/_switchgrass.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,675 copying biorefineries/cornstover/_plot_single_point.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,678 copying biorefineries/cornstover/_plot_spearman.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,681 copying biorefineries/cornstover/_legacy_code.py -> build/lib/biorefineries/cornstover 2025-06-10T10:36:08,683 creating build/lib/biorefineries/corn 2025-06-10T10:36:08,685 copying biorefineries/corn/systems.py -> build/lib/biorefineries/corn 2025-06-10T10:36:08,688 copying biorefineries/corn/__init__.py -> build/lib/biorefineries/corn 2025-06-10T10:36:08,691 copying biorefineries/corn/units.py -> build/lib/biorefineries/corn 2025-06-10T10:36:08,693 copying biorefineries/corn/tea.py -> build/lib/biorefineries/corn 2025-06-10T10:36:08,696 copying biorefineries/corn/README.md -> build/lib/biorefineries/corn 2025-06-10T10:36:08,698 copying biorefineries/corn/utils.py -> build/lib/biorefineries/corn 2025-06-10T10:36:08,700 copying biorefineries/corn/chemicals.py -> build/lib/biorefineries/corn 2025-06-10T10:36:08,703 copying biorefineries/corn/process_settings.py -> build/lib/biorefineries/corn 2025-06-10T10:36:08,705 copying biorefineries/corn/biorefinery.py -> build/lib/biorefineries/corn 2025-06-10T10:36:08,708 creating build/lib/biorefineries/lactic 2025-06-10T10:36:08,709 copying biorefineries/lactic/_units.py -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,713 copying biorefineries/lactic/_process_settings.py -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,716 copying biorefineries/lactic/systems.py -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,718 copying biorefineries/lactic/_tea.py -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,721 copying biorefineries/lactic/__init__.py -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,723 copying biorefineries/lactic/README.rst -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,726 copying biorefineries/lactic/models.py -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,729 copying biorefineries/lactic/_profile.py -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,732 copying biorefineries/lactic/_processes.py -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,735 copying biorefineries/lactic/utils.py -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,738 copying biorefineries/lactic/_chemicals.py -> build/lib/biorefineries/lactic 2025-06-10T10:36:08,741 creating build/lib/biorefineries/lactic/analyses 2025-06-10T10:36:08,742 copying biorefineries/lactic/analyses/1_uncertainties.py -> build/lib/biorefineries/lactic/analyses 2025-06-10T10:36:08,745 copying biorefineries/lactic/analyses/2_fermentation_TRY.py -> build/lib/biorefineries/lactic/analyses 2025-06-10T10:36:08,748 copying biorefineries/lactic/analyses/3_feedstock_carb-price.py -> build/lib/biorefineries/lactic/analyses 2025-06-10T10:36:08,750 creating build/lib/biorefineries/sugarcane 2025-06-10T10:36:08,751 copying biorefineries/sugarcane/_process_settings.py -> build/lib/biorefineries/sugarcane 2025-06-10T10:36:08,753 copying biorefineries/sugarcane/systems.py -> build/lib/biorefineries/sugarcane 2025-06-10T10:36:08,755 copying biorefineries/sugarcane/_tea.py -> build/lib/biorefineries/sugarcane 2025-06-10T10:36:08,758 copying biorefineries/sugarcane/__init__.py -> build/lib/biorefineries/sugarcane 2025-06-10T10:36:08,761 copying biorefineries/sugarcane/README.rst -> build/lib/biorefineries/sugarcane 2025-06-10T10:36:08,763 copying biorefineries/sugarcane/_chemicals.py -> build/lib/biorefineries/sugarcane 2025-06-10T10:36:08,765 copying biorefineries/sugarcane/model.py -> build/lib/biorefineries/sugarcane 2025-06-10T10:36:08,767 creating build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,769 copying biorefineries/fattyalcohols/_tea.py -> build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,771 copying biorefineries/fattyalcohols/__init__.py -> build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,774 copying biorefineries/fattyalcohols/README.rst -> build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,776 copying biorefineries/fattyalcohols/_system.py -> build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,779 copying biorefineries/fattyalcohols/streams.yaml -> build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,781 copying biorefineries/fattyalcohols/_process_specifications.py -> build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,784 copying biorefineries/fattyalcohols/utils.py -> build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,786 copying biorefineries/fattyalcohols/chemicals.yaml -> build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,788 copying biorefineries/fattyalcohols/_fattyalcohol_production.py -> build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,791 copying biorefineries/fattyalcohols/_chemicals.py -> build/lib/biorefineries/fattyalcohols 2025-06-10T10:36:08,793 creating build/lib/biorefineries/fattyalcohols/units 2025-06-10T10:36:08,794 copying biorefineries/fattyalcohols/units/__init__.py -> build/lib/biorefineries/fattyalcohols/units 2025-06-10T10:36:08,797 copying biorefineries/fattyalcohols/units/slle_centrifuge.py -> build/lib/biorefineries/fattyalcohols/units 2025-06-10T10:36:08,800 copying biorefineries/fattyalcohols/units/fatty_alcohol_bioreactor.py -> build/lib/biorefineries/fattyalcohols/units 2025-06-10T10:36:08,802 creating build/lib/biorefineries/LAOs 2025-06-10T10:36:08,803 copying biorefineries/LAOs/_tea.py -> build/lib/biorefineries/LAOs 2025-06-10T10:36:08,805 copying biorefineries/LAOs/__init__.py -> build/lib/biorefineries/LAOs 2025-06-10T10:36:08,807 copying biorefineries/LAOs/README.rst -> build/lib/biorefineries/LAOs 2025-06-10T10:36:08,810 copying biorefineries/LAOs/_system.py -> build/lib/biorefineries/LAOs 2025-06-10T10:36:08,813 copying biorefineries/LAOs/streams.yaml -> build/lib/biorefineries/LAOs 2025-06-10T10:36:08,815 copying biorefineries/LAOs/_process_specifications.py -> build/lib/biorefineries/LAOs 2025-06-10T10:36:08,818 copying biorefineries/LAOs/utils.py -> build/lib/biorefineries/LAOs 2025-06-10T10:36:08,821 copying biorefineries/LAOs/chemicals.yaml -> build/lib/biorefineries/LAOs 2025-06-10T10:36:08,823 copying biorefineries/LAOs/analysis.ipynb -> build/lib/biorefineries/LAOs 2025-06-10T10:36:08,896 copying biorefineries/LAOs/_chemicals.py -> build/lib/biorefineries/LAOs 2025-06-10T10:36:08,899 creating build/lib/biorefineries/LAOs/units 2025-06-10T10:36:08,900 copying biorefineries/LAOs/units/__init__.py -> build/lib/biorefineries/LAOs/units 2025-06-10T10:36:08,902 copying biorefineries/LAOs/units/surge_tank.py -> build/lib/biorefineries/LAOs/units 2025-06-10T10:36:08,904 copying biorefineries/LAOs/units/adiabatic_fixedbed_gas_reactor.py -> build/lib/biorefineries/LAOs/units 2025-06-10T10:36:08,907 copying biorefineries/LAOs/units/nitrogen_generation_package.py -> build/lib/biorefineries/LAOs/units 2025-06-10T10:36:08,909 creating build/lib/biorefineries/abm 2025-06-10T10:36:08,910 copying biorefineries/abm/corn.py -> build/lib/biorefineries/abm 2025-06-10T10:36:08,913 copying biorefineries/abm/cornstover.py -> build/lib/biorefineries/abm 2025-06-10T10:36:08,916 copying biorefineries/abm/abm_yield_example.py -> build/lib/biorefineries/abm 2025-06-10T10:36:08,918 copying biorefineries/abm/breakdown.py -> build/lib/biorefineries/abm 2025-06-10T10:36:08,921 creating build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,922 copying biorefineries/gas_fermentation/tables.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,924 copying biorefineries/gas_fermentation/systems.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,928 copying biorefineries/gas_fermentation/back_of_the_envelope_calculations.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,930 copying biorefineries/gas_fermentation/__init__.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,932 copying biorefineries/gas_fermentation/units.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,935 copying biorefineries/gas_fermentation/plots.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,939 copying biorefineries/gas_fermentation/data.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,941 copying biorefineries/gas_fermentation/tests.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,944 copying biorefineries/gas_fermentation/uncertainty.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,947 copying biorefineries/gas_fermentation/README.md -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,949 copying biorefineries/gas_fermentation/process_settings.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,951 copying biorefineries/gas_fermentation/property_package.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,954 copying biorefineries/gas_fermentation/biorefinery.py -> build/lib/biorefineries/gas_fermentation 2025-06-10T10:36:08,956 creating build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:08,957 copying biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:08,966 copying biorefineries/gas_fermentation/images/sensitivity.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:08,970 copying biorefineries/gas_fermentation/images/configuration_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:08,980 copying biorefineries/gas_fermentation/images/spearman.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:08,988 copying biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:08,993 copying biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:08,998 copying biorefineries/gas_fermentation/images/preliminary_flowsheet_with_auxiliaries.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,001 copying biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,004 copying biorefineries/gas_fermentation/images/preliminary_flowsheet.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,007 copying biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,011 copying biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,023 copying biorefineries/gas_fermentation/images/uncertainty.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,026 copying biorefineries/gas_fermentation/images/configuration_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,038 copying biorefineries/gas_fermentation/images/kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,047 copying biorefineries/gas_fermentation/images/oleochemical_yield_contours.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,063 copying biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,075 copying biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,087 copying biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,099 copying biorefineries/gas_fermentation/images/montecarlo_absolute.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,105 copying biorefineries/gas_fermentation/images/montecarlo_absolute.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,113 copying biorefineries/gas_fermentation/images/MSP_CI_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,165 copying biorefineries/gas_fermentation/images/preliminary_contour.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,169 copying biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,173 copying biorefineries/gas_fermentation/images/sensitivity.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,177 copying biorefineries/gas_fermentation/images/AcEster_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,180 copying biorefineries/gas_fermentation/images/impact.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,185 copying biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,188 copying biorefineries/gas_fermentation/images/oleochemical_yield_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,192 copying biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,201 copying biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,214 copying biorefineries/gas_fermentation/images/AcOH_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,218 copying biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,230 copying biorefineries/gas_fermentation/images/impact.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,234 copying biorefineries/gas_fermentation/images/H2_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,238 copying biorefineries/gas_fermentation/images/impact_of_length_to_diameter.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,249 copying biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,258 copying biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,268 copying biorefineries/gas_fermentation/images/spearman.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,272 copying biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,278 copying biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,289 copying biorefineries/gas_fermentation/images/kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,299 copying biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,312 copying biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,315 copying biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,325 copying biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,339 copying biorefineries/gas_fermentation/images/MSP_CI_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,355 copying biorefineries/gas_fermentation/images/impact_of_length_to_diameter.svg -> build/lib/biorefineries/gas_fermentation/images 2025-06-10T10:36:09,361 creating build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,362 copying biorefineries/gas_fermentation/results/all fermentation-acetate growth_monte_carlo.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,396 copying biorefineries/gas_fermentation/results/all fermentation-glucose growth_5000 -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,415 copying biorefineries/gas_fermentation/results/all fermentation-glucose growth_monte_carlo.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,441 copying biorefineries/gas_fermentation/results/expenditures.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,444 copying biorefineries/gas_fermentation/results/all fermentation-glucose growth_monte_carlo_across_bioreactor_yield.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,449 copying biorefineries/gas_fermentation/results/all-glucose growth_5000 -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,468 copying biorefineries/gas_fermentation/results/all-glucose growth_monte_carlo.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,504 copying biorefineries/gas_fermentation/results/all fermentation-acetate growth_5000 -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,521 copying biorefineries/gas_fermentation/results/all-acetate growth_monte_carlo.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,550 copying biorefineries/gas_fermentation/results/potential yield-glucose growth_monte_carlo_across_H2_price.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,554 copying biorefineries/gas_fermentation/results/all fermentation-glucose growth_spearman.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,556 copying biorefineries/gas_fermentation/results/distributions.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,559 copying biorefineries/gas_fermentation/results/MSP_GWP_oleochemical_yield_and_price.npy -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,562 copying biorefineries/gas_fermentation/results/all fermentation-acetate growth_spearman.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,564 copying biorefineries/gas_fermentation/results/baseline yield-glucose growth_monte_carlo_across_H2_price.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,568 copying biorefineries/gas_fermentation/results/life_cycle.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,571 copying biorefineries/gas_fermentation/results/all fermentation-acetate growth_1000 -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,577 copying biorefineries/gas_fermentation/results/all-glucose growth_spearman.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,580 copying biorefineries/gas_fermentation/results/MSP_GWP_oleochemical_yield.npy -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,582 copying biorefineries/gas_fermentation/results/all fermentation-glucose growth_1000 -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,588 copying biorefineries/gas_fermentation/results/all fermentation-glucose growth_detailed_report.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,649 copying biorefineries/gas_fermentation/results/all-acetate growth_5000 -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,668 copying biorefineries/gas_fermentation/results/all-acetate growth_spearman.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,671 copying biorefineries/gas_fermentation/results/all fermentation-acetate growth_detailed_report.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,725 copying biorefineries/gas_fermentation/results/all fermentation-glucose growth_monte_carlo_across_H2_price.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-06-10T10:36:09,729 creating build/lib/biorefineries/gas_fermentation/notebooks 2025-06-10T10:36:09,730 copying biorefineries/gas_fermentation/notebooks/arpa_e_project.py -> build/lib/biorefineries/gas_fermentation/notebooks 2025-06-10T10:36:09,733 creating build/lib/biorefineries/tests 2025-06-10T10:36:09,734 copying biorefineries/tests/__init__.py -> build/lib/biorefineries/tests 2025-06-10T10:36:09,737 copying biorefineries/tests/test_biorefineries.py -> build/lib/biorefineries/tests 2025-06-10T10:36:09,741 copying biorefineries/tests/run_readmes.py -> build/lib/biorefineries/tests 2025-06-10T10:36:09,772 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-06-10T10:36:09,773 !! 2025-06-10T10:36:09,774 ******************************************************************************** 2025-06-10T10:36:09,774 Please avoid running ``setup.py`` directly. 2025-06-10T10:36:09,775 Instead, use pypa/build, pypa/installer or other 2025-06-10T10:36:09,775 standards-based tools. 2025-06-10T10:36:09,776 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-10T10:36:09,776 or your builds will no longer be supported. 2025-06-10T10:36:09,778 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-06-10T10:36:09,778 ******************************************************************************** 2025-06-10T10:36:09,779 !! 2025-06-10T10:36:09,780 self.initialize_options() 2025-06-10T10:36:09,800 installing to build/bdist.linux-armv7l/wheel 2025-06-10T10:36:09,801 running install 2025-06-10T10:36:09,825 running install_lib 2025-06-10T10:36:09,853 creating build/bdist.linux-armv7l/wheel 2025-06-10T10:36:09,855 creating build/bdist.linux-armv7l/wheel/biorefineries 2025-06-10T10:36:09,857 creating build/bdist.linux-armv7l/wheel/biorefineries/biodiesel 2025-06-10T10:36:09,858 copying build/lib/biorefineries/biodiesel/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel 2025-06-10T10:36:09,861 copying build/lib/biorefineries/biodiesel/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel 2025-06-10T10:36:09,863 creating build/bdist.linux-armv7l/wheel/biorefineries/biodiesel/units 2025-06-10T10:36:09,865 copying build/lib/biorefineries/biodiesel/units/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel/units 2025-06-10T10:36:09,867 copying build/lib/biorefineries/biodiesel/units/transesterification.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel/units 2025-06-10T10:36:09,869 copying build/lib/biorefineries/biodiesel/units/skimming_tank.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel/units 2025-06-10T10:36:09,871 copying build/lib/biorefineries/biodiesel/units/glycerolysis_reactor.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel/units 2025-06-10T10:36:09,873 copying build/lib/biorefineries/biodiesel/streams.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel 2025-06-10T10:36:09,876 creating build/bdist.linux-armv7l/wheel/biorefineries/tests 2025-06-10T10:36:09,877 copying build/lib/biorefineries/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tests 2025-06-10T10:36:09,879 copying build/lib/biorefineries/tests/test_biorefineries.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tests 2025-06-10T10:36:09,882 copying build/lib/biorefineries/tests/run_readmes.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tests 2025-06-10T10:36:09,885 creating build/bdist.linux-armv7l/wheel/biorefineries/oilcane 2025-06-10T10:36:09,886 copying build/lib/biorefineries/oilcane/_uncertainty_plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,890 copying build/lib/biorefineries/oilcane/lca_benchmarks.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,892 copying build/lib/biorefineries/oilcane/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,894 copying build/lib/biorefineries/oilcane/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,896 copying build/lib/biorefineries/oilcane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,898 copying build/lib/biorefineries/oilcane/_parse_configuration.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,900 copying build/lib/biorefineries/oilcane/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,902 copying build/lib/biorefineries/oilcane/sankey_energy.ipynb -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,971 copying build/lib/biorefineries/oilcane/_evaluation.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,973 copying build/lib/biorefineries/oilcane/README.md -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,976 copying build/lib/biorefineries/oilcane/_line_plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,979 copying build/lib/biorefineries/oilcane/utils.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,981 copying build/lib/biorefineries/oilcane/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,983 copying build/lib/biorefineries/oilcane/sankey_plot.ipynb -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,986 copying build/lib/biorefineries/oilcane/webapp_model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,989 copying build/lib/biorefineries/oilcane/_tables.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,991 copying build/lib/biorefineries/oilcane/_feature_mockups.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,993 copying build/lib/biorefineries/oilcane/_contour_plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,996 copying build/lib/biorefineries/oilcane/_load_data.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-06-10T10:36:09,998 copying build/lib/biorefineries/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries 2025-06-10T10:36:10,001 creating build/bdist.linux-armv7l/wheel/biorefineries/lactic 2025-06-10T10:36:10,002 copying build/lib/biorefineries/lactic/_units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,005 copying build/lib/biorefineries/lactic/_process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,008 copying build/lib/biorefineries/lactic/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,011 copying build/lib/biorefineries/lactic/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,013 copying build/lib/biorefineries/lactic/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,015 copying build/lib/biorefineries/lactic/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,019 copying build/lib/biorefineries/lactic/models.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,021 copying build/lib/biorefineries/lactic/_profile.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,023 copying build/lib/biorefineries/lactic/_processes.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,026 copying build/lib/biorefineries/lactic/utils.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,029 copying build/lib/biorefineries/lactic/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-06-10T10:36:10,032 creating build/bdist.linux-armv7l/wheel/biorefineries/lactic/analyses 2025-06-10T10:36:10,033 copying build/lib/biorefineries/lactic/analyses/1_uncertainties.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic/analyses 2025-06-10T10:36:10,036 copying build/lib/biorefineries/lactic/analyses/2_fermentation_TRY.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic/analyses 2025-06-10T10:36:10,039 copying build/lib/biorefineries/lactic/analyses/3_feedstock_carb-price.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic/analyses 2025-06-10T10:36:10,041 creating build/bdist.linux-armv7l/wheel/biorefineries/corn 2025-06-10T10:36:10,042 copying build/lib/biorefineries/corn/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-06-10T10:36:10,045 copying build/lib/biorefineries/corn/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-06-10T10:36:10,047 copying build/lib/biorefineries/corn/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-06-10T10:36:10,049 copying build/lib/biorefineries/corn/tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-06-10T10:36:10,052 copying build/lib/biorefineries/corn/README.md -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-06-10T10:36:10,054 copying build/lib/biorefineries/corn/utils.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-06-10T10:36:10,056 copying build/lib/biorefineries/corn/chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-06-10T10:36:10,058 copying build/lib/biorefineries/corn/process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-06-10T10:36:10,061 copying build/lib/biorefineries/corn/biorefinery.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-06-10T10:36:10,064 creating build/bdist.linux-armv7l/wheel/biorefineries/abm 2025-06-10T10:36:10,065 copying build/lib/biorefineries/abm/corn.py -> build/bdist.linux-armv7l/wheel/./biorefineries/abm 2025-06-10T10:36:10,068 copying build/lib/biorefineries/abm/cornstover.py -> build/bdist.linux-armv7l/wheel/./biorefineries/abm 2025-06-10T10:36:10,070 copying build/lib/biorefineries/abm/abm_yield_example.py -> build/bdist.linux-armv7l/wheel/./biorefineries/abm 2025-06-10T10:36:10,072 copying build/lib/biorefineries/abm/breakdown.py -> build/bdist.linux-armv7l/wheel/./biorefineries/abm 2025-06-10T10:36:10,074 creating build/bdist.linux-armv7l/wheel/biorefineries/cellulosic 2025-06-10T10:36:10,075 copying build/lib/biorefineries/cellulosic/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-06-10T10:36:10,078 copying build/lib/biorefineries/cellulosic/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-06-10T10:36:10,081 copying build/lib/biorefineries/cellulosic/chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-06-10T10:36:10,083 copying build/lib/biorefineries/cellulosic/process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-06-10T10:36:10,085 creating build/bdist.linux-armv7l/wheel/biorefineries/cellulosic/systems 2025-06-10T10:36:10,087 copying build/lib/biorefineries/cellulosic/systems/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems 2025-06-10T10:36:10,089 creating build/bdist.linux-armv7l/wheel/biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:10,091 copying build/lib/biorefineries/cellulosic/systems/fermentation/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:10,093 copying build/lib/biorefineries/cellulosic/systems/fermentation/general_interface.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:10,095 copying build/lib/biorefineries/cellulosic/systems/fermentation/integrated_bioprocess.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:10,097 copying build/lib/biorefineries/cellulosic/systems/fermentation/saccharification.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:10,100 copying build/lib/biorefineries/cellulosic/systems/fermentation/cofermentation.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:10,102 copying build/lib/biorefineries/cellulosic/systems/fermentation/simultaneous_saccharification_cofermentation.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-06-10T10:36:10,105 creating build/bdist.linux-armv7l/wheel/biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:10,106 copying build/lib/biorefineries/cellulosic/systems/pretreatment/dilute_acid.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:10,108 copying build/lib/biorefineries/cellulosic/systems/pretreatment/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:10,110 copying build/lib/biorefineries/cellulosic/systems/pretreatment/hot_water.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:10,112 copying build/lib/biorefineries/cellulosic/systems/pretreatment/alkaline.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:10,114 copying build/lib/biorefineries/cellulosic/systems/pretreatment/ammonia_fiber_expansion.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/pretreatment 2025-06-10T10:36:10,116 copying build/lib/biorefineries/cellulosic/systems/cellulosic_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems 2025-06-10T10:36:10,118 copying build/lib/biorefineries/cellulosic/streams.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-06-10T10:36:10,120 copying build/lib/biorefineries/cellulosic/biorefinery.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-06-10T10:36:10,123 creating build/bdist.linux-armv7l/wheel/biorefineries/tea 2025-06-10T10:36:10,124 copying build/lib/biorefineries/tea/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tea 2025-06-10T10:36:10,126 copying build/lib/biorefineries/tea/cellulosic_ethanol_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tea 2025-06-10T10:36:10,129 copying build/lib/biorefineries/tea/conventional_ethanol_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tea 2025-06-10T10:36:10,132 creating build/bdist.linux-armv7l/wheel/biorefineries/milk 2025-06-10T10:36:10,133 copying build/lib/biorefineries/milk/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,135 copying build/lib/biorefineries/milk/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,137 copying build/lib/biorefineries/milk/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,139 copying build/lib/biorefineries/milk/plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,141 copying build/lib/biorefineries/milk/data.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,143 copying build/lib/biorefineries/milk/tests.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,145 copying build/lib/biorefineries/milk/uncertainty.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,148 copying build/lib/biorefineries/milk/README.md -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,150 copying build/lib/biorefineries/milk/chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,152 copying build/lib/biorefineries/milk/process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,155 creating build/bdist.linux-armv7l/wheel/biorefineries/milk/images 2025-06-10T10:36:10,156 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-06-10T10:36:10,160 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-06-10T10:36:10,164 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.png -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-06-10T10:36:10,174 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.png -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-06-10T10:36:10,183 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.png -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-06-10T10:36:10,191 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-06-10T10:36:10,195 copying build/lib/biorefineries/milk/GalactoOligoSaccharideProcess.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,234 creating build/bdist.linux-armv7l/wheel/biorefineries/milk/results 2025-06-10T10:36:10,235 copying build/lib/biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate_GlucoseMedia.npy -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/results 2025-06-10T10:36:10,238 copying build/lib/biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate.npy -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/results 2025-06-10T10:36:10,240 copying build/lib/biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_GlucoseMedia.npy -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/results 2025-06-10T10:36:10,243 copying build/lib/biorefineries/milk/biorefinery.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-06-10T10:36:10,247 creating build/bdist.linux-armv7l/wheel/biorefineries/cane 2025-06-10T10:36:10,248 copying build/lib/biorefineries/cane/uncertainty_plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,252 copying build/lib/biorefineries/cane/tables.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,255 copying build/lib/biorefineries/cane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,257 copying build/lib/biorefineries/cane/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,259 copying build/lib/biorefineries/cane/oil_extraction.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,262 copying build/lib/biorefineries/cane/feature_mockups.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,264 copying build/lib/biorefineries/cane/rename_soon.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,266 copying build/lib/biorefineries/cane/results.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,269 copying build/lib/biorefineries/cane/composition.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,272 copying build/lib/biorefineries/cane/README.md -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,274 copying build/lib/biorefineries/cane/chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,277 copying build/lib/biorefineries/cane/process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,279 copying build/lib/biorefineries/cane/configurations_biomass_yield_analysis.npy -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,282 copying build/lib/biorefineries/cane/evaluation.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,286 creating build/bdist.linux-armv7l/wheel/biorefineries/cane/systems 2025-06-10T10:36:10,287 copying build/lib/biorefineries/cane/systems/fermentation.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,290 creating build/bdist.linux-armv7l/wheel/biorefineries/cane/systems/oilcane 2025-06-10T10:36:10,292 copying build/lib/biorefineries/cane/systems/oilcane/cellulosic_biodiesel_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/oilcane 2025-06-10T10:36:10,294 copying build/lib/biorefineries/cane/systems/oilcane/crude_oil_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/oilcane 2025-06-10T10:36:10,296 copying build/lib/biorefineries/cane/systems/oilcane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/oilcane 2025-06-10T10:36:10,298 copying build/lib/biorefineries/cane/systems/oilcane/cellulosic_crude_oil_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/oilcane 2025-06-10T10:36:10,300 copying build/lib/biorefineries/cane/systems/oilcane/biodiesel_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/oilcane 2025-06-10T10:36:10,302 copying build/lib/biorefineries/cane/systems/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,304 copying build/lib/biorefineries/cane/systems/biodiesel_actag.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,307 copying build/lib/biorefineries/cane/systems/lipidcane.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,309 copying build/lib/biorefineries/cane/systems/biodiesel.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,311 copying build/lib/biorefineries/cane/systems/juicing.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,314 copying build/lib/biorefineries/cane/systems/bagasse.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,315 copying build/lib/biorefineries/cane/systems/pretreatment.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,317 copying build/lib/biorefineries/cane/systems/cellulosic_biodiesel.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,320 copying build/lib/biorefineries/cane/systems/cellulosic_biodiesel_actag.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,323 creating build/bdist.linux-armv7l/wheel/biorefineries/cane/systems/sugarcane 2025-06-10T10:36:10,324 copying build/lib/biorefineries/cane/systems/sugarcane/sugar_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/sugarcane 2025-06-10T10:36:10,326 copying build/lib/biorefineries/cane/systems/sugarcane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/sugarcane 2025-06-10T10:36:10,328 copying build/lib/biorefineries/cane/systems/sugarcane/cellulosic_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/sugarcane 2025-06-10T10:36:10,331 copying build/lib/biorefineries/cane/systems/sugarcane/ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/sugarcane 2025-06-10T10:36:10,333 copying build/lib/biorefineries/cane/systems/lipid_extraction.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,335 copying build/lib/biorefineries/cane/systems/sugar.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-06-10T10:36:10,338 copying build/lib/biorefineries/cane/streams.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,340 copying build/lib/biorefineries/cane/biorefinery.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,344 copying build/lib/biorefineries/cane/parse_configuration.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,346 copying build/lib/biorefineries/cane/contour_plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-06-10T10:36:10,350 creating build/bdist.linux-armv7l/wheel/biorefineries/cane/data 2025-06-10T10:36:10,351 copying build/lib/biorefineries/cane/data/price_distributions_2023.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-06-10T10:36:10,354 copying build/lib/biorefineries/cane/data/cane_composition_data_full.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-06-10T10:36:10,356 copying build/lib/biorefineries/cane/data/price_distributions_2022.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-06-10T10:36:10,359 copying build/lib/biorefineries/cane/data/lca_characterization_factors.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-06-10T10:36:10,361 copying build/lib/biorefineries/cane/data/RIN_prices_2023.csv -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-06-10T10:36:10,368 copying build/lib/biorefineries/cane/data/RIN_prices_2022.csv -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-06-10T10:36:10,377 copying build/lib/biorefineries/cane/data/cane_composition_data.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-06-10T10:36:10,379 copying build/lib/biorefineries/cane/data/microbial_oil_baseline.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-06-10T10:36:10,382 creating build/bdist.linux-armv7l/wheel/biorefineries/gas_fermentation 2025-06-10T10:36:10,383 copying build/lib/biorefineries/gas_fermentation/tables.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,385 copying build/lib/biorefineries/gas_fermentation/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,388 copying build/lib/biorefineries/gas_fermentation/back_of_the_envelope_calculations.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,390 copying build/lib/biorefineries/gas_fermentation/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,392 copying build/lib/biorefineries/gas_fermentation/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,394 copying build/lib/biorefineries/gas_fermentation/plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,397 copying build/lib/biorefineries/gas_fermentation/data.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,399 copying build/lib/biorefineries/gas_fermentation/tests.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,401 copying build/lib/biorefineries/gas_fermentation/uncertainty.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,404 copying build/lib/biorefineries/gas_fermentation/README.md -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,406 copying build/lib/biorefineries/gas_fermentation/process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:10,409 creating build/bdist.linux-armv7l/wheel/biorefineries/gas_fermentation/notebooks 2025-06-10T10:36:10,410 copying build/lib/biorefineries/gas_fermentation/notebooks/arpa_e_project.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/notebooks 2025-06-10T10:36:10,414 creating build/bdist.linux-armv7l/wheel/biorefineries/gas_fermentation/images 2025-06-10T10:36:10,415 copying build/lib/biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,425 copying build/lib/biorefineries/gas_fermentation/images/sensitivity.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,430 copying build/lib/biorefineries/gas_fermentation/images/configuration_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,441 copying build/lib/biorefineries/gas_fermentation/images/spearman.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,449 copying build/lib/biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,454 copying build/lib/biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,458 copying build/lib/biorefineries/gas_fermentation/images/preliminary_flowsheet_with_auxiliaries.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,460 copying build/lib/biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,463 copying build/lib/biorefineries/gas_fermentation/images/preliminary_flowsheet.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,466 copying build/lib/biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,469 copying build/lib/biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,476 copying build/lib/biorefineries/gas_fermentation/images/uncertainty.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,478 copying build/lib/biorefineries/gas_fermentation/images/configuration_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,490 copying build/lib/biorefineries/gas_fermentation/images/kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,497 copying build/lib/biorefineries/gas_fermentation/images/oleochemical_yield_contours.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,511 copying build/lib/biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,520 copying build/lib/biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,529 copying build/lib/biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,538 copying build/lib/biorefineries/gas_fermentation/images/montecarlo_absolute.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,543 copying build/lib/biorefineries/gas_fermentation/images/montecarlo_absolute.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,549 copying build/lib/biorefineries/gas_fermentation/images/MSP_CI_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,605 copying build/lib/biorefineries/gas_fermentation/images/preliminary_contour.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,608 copying build/lib/biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,611 copying build/lib/biorefineries/gas_fermentation/images/sensitivity.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,614 copying build/lib/biorefineries/gas_fermentation/images/AcEster_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,618 copying build/lib/biorefineries/gas_fermentation/images/impact.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,622 copying build/lib/biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,626 copying build/lib/biorefineries/gas_fermentation/images/oleochemical_yield_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,632 copying build/lib/biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,645 copying build/lib/biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,651 copying build/lib/biorefineries/gas_fermentation/images/AcOH_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,655 copying build/lib/biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,663 copying build/lib/biorefineries/gas_fermentation/images/impact.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,666 copying build/lib/biorefineries/gas_fermentation/images/H2_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,669 copying build/lib/biorefineries/gas_fermentation/images/impact_of_length_to_diameter.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,681 copying build/lib/biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,689 copying build/lib/biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,698 copying build/lib/biorefineries/gas_fermentation/images/spearman.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,702 copying build/lib/biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,706 copying build/lib/biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,714 copying build/lib/biorefineries/gas_fermentation/images/kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,724 copying build/lib/biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,735 copying build/lib/biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,738 copying build/lib/biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,752 copying build/lib/biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,765 copying build/lib/biorefineries/gas_fermentation/images/MSP_CI_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,778 copying build/lib/biorefineries/gas_fermentation/images/impact_of_length_to_diameter.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-06-10T10:36:10,784 creating build/bdist.linux-armv7l/wheel/biorefineries/gas_fermentation/results 2025-06-10T10:36:10,785 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-acetate growth_monte_carlo.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,808 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-glucose growth_5000 -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,826 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-glucose growth_monte_carlo.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,854 copying build/lib/biorefineries/gas_fermentation/results/expenditures.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,857 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-glucose growth_monte_carlo_across_bioreactor_yield.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,863 copying build/lib/biorefineries/gas_fermentation/results/all-glucose growth_5000 -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,884 copying build/lib/biorefineries/gas_fermentation/results/all-glucose growth_monte_carlo.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,920 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-acetate growth_5000 -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,936 copying build/lib/biorefineries/gas_fermentation/results/all-acetate growth_monte_carlo.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,972 copying build/lib/biorefineries/gas_fermentation/results/potential yield-glucose growth_monte_carlo_across_H2_price.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,975 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-glucose growth_spearman.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,977 copying build/lib/biorefineries/gas_fermentation/results/distributions.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,979 copying build/lib/biorefineries/gas_fermentation/results/MSP_GWP_oleochemical_yield_and_price.npy -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,981 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-acetate growth_spearman.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,984 copying build/lib/biorefineries/gas_fermentation/results/baseline yield-glucose growth_monte_carlo_across_H2_price.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,987 copying build/lib/biorefineries/gas_fermentation/results/life_cycle.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,989 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-acetate growth_1000 -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,995 copying build/lib/biorefineries/gas_fermentation/results/all-glucose growth_spearman.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,997 copying build/lib/biorefineries/gas_fermentation/results/MSP_GWP_oleochemical_yield.npy -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:10,999 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-glucose growth_1000 -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:11,005 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-glucose growth_detailed_report.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:11,069 copying build/lib/biorefineries/gas_fermentation/results/all-acetate growth_5000 -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:11,087 copying build/lib/biorefineries/gas_fermentation/results/all-acetate growth_spearman.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:11,090 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-acetate growth_detailed_report.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:11,155 copying build/lib/biorefineries/gas_fermentation/results/all fermentation-glucose growth_monte_carlo_across_H2_price.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-06-10T10:36:11,158 copying build/lib/biorefineries/gas_fermentation/property_package.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:11,160 copying build/lib/biorefineries/gas_fermentation/biorefinery.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-06-10T10:36:11,164 creating build/bdist.linux-armv7l/wheel/biorefineries/ethanol 2025-06-10T10:36:11,165 copying build/lib/biorefineries/ethanol/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/ethanol 2025-06-10T10:36:11,167 copying build/lib/biorefineries/ethanol/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/ethanol 2025-06-10T10:36:11,169 copying build/lib/biorefineries/ethanol/streams.py -> build/bdist.linux-armv7l/wheel/./biorefineries/ethanol 2025-06-10T10:36:11,171 creating build/bdist.linux-armv7l/wheel/biorefineries/sugarcane 2025-06-10T10:36:11,172 copying build/lib/biorefineries/sugarcane/_process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-06-10T10:36:11,175 copying build/lib/biorefineries/sugarcane/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-06-10T10:36:11,177 copying build/lib/biorefineries/sugarcane/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-06-10T10:36:11,179 copying build/lib/biorefineries/sugarcane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-06-10T10:36:11,181 copying build/lib/biorefineries/sugarcane/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-06-10T10:36:11,183 copying build/lib/biorefineries/sugarcane/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-06-10T10:36:11,185 copying build/lib/biorefineries/sugarcane/model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-06-10T10:36:11,187 creating build/bdist.linux-armv7l/wheel/biorefineries/LAOs 2025-06-10T10:36:11,188 copying build/lib/biorefineries/LAOs/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-06-10T10:36:11,190 copying build/lib/biorefineries/LAOs/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-06-10T10:36:11,192 copying build/lib/biorefineries/LAOs/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-06-10T10:36:11,194 copying build/lib/biorefineries/LAOs/_system.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-06-10T10:36:11,197 copying build/lib/biorefineries/LAOs/streams.yaml -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-06-10T10:36:11,199 copying build/lib/biorefineries/LAOs/_process_specifications.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-06-10T10:36:11,202 creating build/bdist.linux-armv7l/wheel/biorefineries/LAOs/units 2025-06-10T10:36:11,204 copying build/lib/biorefineries/LAOs/units/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs/units 2025-06-10T10:36:11,206 copying build/lib/biorefineries/LAOs/units/surge_tank.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs/units 2025-06-10T10:36:11,207 copying build/lib/biorefineries/LAOs/units/adiabatic_fixedbed_gas_reactor.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs/units 2025-06-10T10:36:11,210 copying build/lib/biorefineries/LAOs/units/nitrogen_generation_package.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs/units 2025-06-10T10:36:11,212 copying build/lib/biorefineries/LAOs/utils.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-06-10T10:36:11,214 copying build/lib/biorefineries/LAOs/chemicals.yaml -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-06-10T10:36:11,216 copying build/lib/biorefineries/LAOs/analysis.ipynb -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-06-10T10:36:11,283 copying build/lib/biorefineries/LAOs/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-06-10T10:36:11,286 creating build/bdist.linux-armv7l/wheel/biorefineries/fattyalcohols 2025-06-10T10:36:11,287 copying build/lib/biorefineries/fattyalcohols/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-06-10T10:36:11,289 copying build/lib/biorefineries/fattyalcohols/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-06-10T10:36:11,291 copying build/lib/biorefineries/fattyalcohols/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-06-10T10:36:11,293 copying build/lib/biorefineries/fattyalcohols/_system.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-06-10T10:36:11,295 copying build/lib/biorefineries/fattyalcohols/streams.yaml -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-06-10T10:36:11,297 copying build/lib/biorefineries/fattyalcohols/_process_specifications.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-06-10T10:36:11,299 creating build/bdist.linux-armv7l/wheel/biorefineries/fattyalcohols/units 2025-06-10T10:36:11,300 copying build/lib/biorefineries/fattyalcohols/units/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols/units 2025-06-10T10:36:11,303 copying build/lib/biorefineries/fattyalcohols/units/slle_centrifuge.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols/units 2025-06-10T10:36:11,305 copying build/lib/biorefineries/fattyalcohols/units/fatty_alcohol_bioreactor.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols/units 2025-06-10T10:36:11,307 copying build/lib/biorefineries/fattyalcohols/utils.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-06-10T10:36:11,309 copying build/lib/biorefineries/fattyalcohols/chemicals.yaml -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-06-10T10:36:11,311 copying build/lib/biorefineries/fattyalcohols/_fattyalcohol_production.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-06-10T10:36:11,313 copying build/lib/biorefineries/fattyalcohols/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-06-10T10:36:11,316 creating build/bdist.linux-armv7l/wheel/biorefineries/cornstover 2025-06-10T10:36:11,317 copying build/lib/biorefineries/cornstover/_process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,319 copying build/lib/biorefineries/cornstover/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,321 copying build/lib/biorefineries/cornstover/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,323 copying build/lib/biorefineries/cornstover/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,325 copying build/lib/biorefineries/cornstover/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,327 copying build/lib/biorefineries/cornstover/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,329 copying build/lib/biorefineries/cornstover/_sankey.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,331 copying build/lib/biorefineries/cornstover/_plot_uncertainty.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,334 copying build/lib/biorefineries/cornstover/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,336 copying build/lib/biorefineries/cornstover/model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,338 copying build/lib/biorefineries/cornstover/webapp_model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,340 copying build/lib/biorefineries/cornstover/_analysis.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,342 copying build/lib/biorefineries/cornstover/_plot_bars.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,344 copying build/lib/biorefineries/cornstover/_switchgrass.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,346 copying build/lib/biorefineries/cornstover/_plot_single_point.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,348 copying build/lib/biorefineries/cornstover/_plot_spearman.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,350 copying build/lib/biorefineries/cornstover/_legacy_code.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-06-10T10:36:11,353 creating build/bdist.linux-armv7l/wheel/biorefineries/lipidcane 2025-06-10T10:36:11,354 copying build/lib/biorefineries/lipidcane/_feedstock_analysis.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,356 copying build/lib/biorefineries/lipidcane/_process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,358 copying build/lib/biorefineries/lipidcane/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,360 copying build/lib/biorefineries/lipidcane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,362 copying build/lib/biorefineries/lipidcane/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,364 copying build/lib/biorefineries/lipidcane/_system.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,366 copying build/lib/biorefineries/lipidcane/_webapp_model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,368 copying build/lib/biorefineries/lipidcane/_plot_uncertainty.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,371 copying build/lib/biorefineries/lipidcane/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,372 copying build/lib/biorefineries/lipidcane/sankey_plot.ipynb -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,432 copying build/lib/biorefineries/lipidcane/model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,435 copying build/lib/biorefineries/lipidcane/_analysis.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,437 copying build/lib/biorefineries/lipidcane/_plot_spearman.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-06-10T10:36:11,439 running install_egg_info 2025-06-10T10:36:11,474 running egg_info 2025-06-10T10:36:11,503 writing biorefineries.egg-info/PKG-INFO 2025-06-10T10:36:11,506 writing dependency_links to biorefineries.egg-info/dependency_links.txt 2025-06-10T10:36:11,508 writing requirements to biorefineries.egg-info/requires.txt 2025-06-10T10:36:11,509 writing top-level names to biorefineries.egg-info/top_level.txt 2025-06-10T10:36:11,594 reading manifest file 'biorefineries.egg-info/SOURCES.txt' 2025-06-10T10:36:11,612 adding license file 'LICENSE.txt' 2025-06-10T10:36:11,628 writing manifest file 'biorefineries.egg-info/SOURCES.txt' 2025-06-10T10:36:11,631 Copying biorefineries.egg-info to build/bdist.linux-armv7l/wheel/./biorefineries-2.34.7-py3.11.egg-info 2025-06-10T10:36:11,642 running install_scripts 2025-06-10T10:36:11,654 creating build/bdist.linux-armv7l/wheel/biorefineries-2.34.7.dist-info/WHEEL 2025-06-10T10:36:11,656 creating '/tmp/pip-wheel-krudc4lm/biorefineries-2.34.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-06-10T10:36:11,659 adding 'biorefineries/__init__.py' 2025-06-10T10:36:11,661 adding 'biorefineries/LAOs/README.rst' 2025-06-10T10:36:11,663 adding 'biorefineries/LAOs/__init__.py' 2025-06-10T10:36:11,664 adding 'biorefineries/LAOs/_chemicals.py' 2025-06-10T10:36:11,666 adding 'biorefineries/LAOs/_process_specifications.py' 2025-06-10T10:36:11,668 adding 'biorefineries/LAOs/_system.py' 2025-06-10T10:36:11,669 adding 'biorefineries/LAOs/_tea.py' 2025-06-10T10:36:12,110 adding 'biorefineries/LAOs/analysis.ipynb' 2025-06-10T10:36:12,134 adding 'biorefineries/LAOs/chemicals.yaml' 2025-06-10T10:36:12,135 adding 'biorefineries/LAOs/streams.yaml' 2025-06-10T10:36:12,136 adding 'biorefineries/LAOs/utils.py' 2025-06-10T10:36:12,138 adding 'biorefineries/LAOs/units/__init__.py' 2025-06-10T10:36:12,139 adding 'biorefineries/LAOs/units/adiabatic_fixedbed_gas_reactor.py' 2025-06-10T10:36:12,140 adding 'biorefineries/LAOs/units/nitrogen_generation_package.py' 2025-06-10T10:36:12,142 adding 'biorefineries/LAOs/units/surge_tank.py' 2025-06-10T10:36:12,144 adding 'biorefineries/abm/abm_yield_example.py' 2025-06-10T10:36:12,145 adding 'biorefineries/abm/breakdown.py' 2025-06-10T10:36:12,146 adding 'biorefineries/abm/corn.py' 2025-06-10T10:36:12,148 adding 'biorefineries/abm/cornstover.py' 2025-06-10T10:36:12,150 adding 'biorefineries/biodiesel/__init__.py' 2025-06-10T10:36:12,151 adding 'biorefineries/biodiesel/streams.py' 2025-06-10T10:36:12,154 adding 'biorefineries/biodiesel/systems.py' 2025-06-10T10:36:12,155 adding 'biorefineries/biodiesel/units/__init__.py' 2025-06-10T10:36:12,157 adding 'biorefineries/biodiesel/units/glycerolysis_reactor.py' 2025-06-10T10:36:12,158 adding 'biorefineries/biodiesel/units/skimming_tank.py' 2025-06-10T10:36:12,159 adding 'biorefineries/biodiesel/units/transesterification.py' 2025-06-10T10:36:12,162 adding 'biorefineries/cane/README.md' 2025-06-10T10:36:12,164 adding 'biorefineries/cane/__init__.py' 2025-06-10T10:36:12,172 adding 'biorefineries/cane/biorefinery.py' 2025-06-10T10:36:12,174 adding 'biorefineries/cane/chemicals.py' 2025-06-10T10:36:12,177 adding 'biorefineries/cane/composition.py' 2025-06-10T10:36:12,182 adding 'biorefineries/cane/configurations_biomass_yield_analysis.npy' 2025-06-10T10:36:12,186 adding 'biorefineries/cane/contour_plots.py' 2025-06-10T10:36:12,189 adding 'biorefineries/cane/evaluation.py' 2025-06-10T10:36:12,192 adding 'biorefineries/cane/feature_mockups.py' 2025-06-10T10:36:12,193 adding 'biorefineries/cane/oil_extraction.py' 2025-06-10T10:36:12,195 adding 'biorefineries/cane/parse_configuration.py' 2025-06-10T10:36:12,196 adding 'biorefineries/cane/process_settings.py' 2025-06-10T10:36:12,197 adding 'biorefineries/cane/rename_soon.py' 2025-06-10T10:36:12,199 adding 'biorefineries/cane/results.py' 2025-06-10T10:36:12,201 adding 'biorefineries/cane/streams.py' 2025-06-10T10:36:12,202 adding 'biorefineries/cane/tables.py' 2025-06-10T10:36:12,210 adding 'biorefineries/cane/uncertainty_plots.py' 2025-06-10T10:36:12,212 adding 'biorefineries/cane/units.py' 2025-06-10T10:36:12,241 adding 'biorefineries/cane/data/RIN_prices_2022.csv' 2025-06-10T10:36:12,260 adding 'biorefineries/cane/data/RIN_prices_2023.csv' 2025-06-10T10:36:12,263 adding 'biorefineries/cane/data/cane_composition_data.xlsx' 2025-06-10T10:36:12,266 adding 'biorefineries/cane/data/cane_composition_data_full.xlsx' 2025-06-10T10:36:12,267 adding 'biorefineries/cane/data/lca_characterization_factors.py' 2025-06-10T10:36:12,269 adding 'biorefineries/cane/data/microbial_oil_baseline.py' 2025-06-10T10:36:12,271 adding 'biorefineries/cane/data/price_distributions_2022.py' 2025-06-10T10:36:12,273 adding 'biorefineries/cane/data/price_distributions_2023.py' 2025-06-10T10:36:12,275 adding 'biorefineries/cane/systems/__init__.py' 2025-06-10T10:36:12,276 adding 'biorefineries/cane/systems/bagasse.py' 2025-06-10T10:36:12,278 adding 'biorefineries/cane/systems/biodiesel.py' 2025-06-10T10:36:12,279 adding 'biorefineries/cane/systems/biodiesel_actag.py' 2025-06-10T10:36:12,281 adding 'biorefineries/cane/systems/cellulosic_biodiesel.py' 2025-06-10T10:36:12,283 adding 'biorefineries/cane/systems/cellulosic_biodiesel_actag.py' 2025-06-10T10:36:12,285 adding 'biorefineries/cane/systems/fermentation.py' 2025-06-10T10:36:12,287 adding 'biorefineries/cane/systems/juicing.py' 2025-06-10T10:36:12,289 adding 'biorefineries/cane/systems/lipid_extraction.py' 2025-06-10T10:36:12,290 adding 'biorefineries/cane/systems/lipidcane.py' 2025-06-10T10:36:12,292 adding 'biorefineries/cane/systems/pretreatment.py' 2025-06-10T10:36:12,293 adding 'biorefineries/cane/systems/sugar.py' 2025-06-10T10:36:12,295 adding 'biorefineries/cane/systems/oilcane/__init__.py' 2025-06-10T10:36:12,297 adding 'biorefineries/cane/systems/oilcane/biodiesel_ethanol.py' 2025-06-10T10:36:12,298 adding 'biorefineries/cane/systems/oilcane/cellulosic_biodiesel_ethanol.py' 2025-06-10T10:36:12,299 adding 'biorefineries/cane/systems/oilcane/cellulosic_crude_oil_ethanol.py' 2025-06-10T10:36:12,301 adding 'biorefineries/cane/systems/oilcane/crude_oil_ethanol.py' 2025-06-10T10:36:12,303 adding 'biorefineries/cane/systems/sugarcane/__init__.py' 2025-06-10T10:36:12,304 adding 'biorefineries/cane/systems/sugarcane/cellulosic_ethanol.py' 2025-06-10T10:36:12,305 adding 'biorefineries/cane/systems/sugarcane/ethanol.py' 2025-06-10T10:36:12,307 adding 'biorefineries/cane/systems/sugarcane/sugar_ethanol.py' 2025-06-10T10:36:12,309 adding 'biorefineries/cellulosic/__init__.py' 2025-06-10T10:36:12,311 adding 'biorefineries/cellulosic/biorefinery.py' 2025-06-10T10:36:12,312 adding 'biorefineries/cellulosic/chemicals.py' 2025-06-10T10:36:12,314 adding 'biorefineries/cellulosic/process_settings.py' 2025-06-10T10:36:12,315 adding 'biorefineries/cellulosic/streams.py' 2025-06-10T10:36:12,319 adding 'biorefineries/cellulosic/units.py' 2025-06-10T10:36:12,321 adding 'biorefineries/cellulosic/systems/__init__.py' 2025-06-10T10:36:12,322 adding 'biorefineries/cellulosic/systems/cellulosic_ethanol.py' 2025-06-10T10:36:12,324 adding 'biorefineries/cellulosic/systems/fermentation/__init__.py' 2025-06-10T10:36:12,326 adding 'biorefineries/cellulosic/systems/fermentation/cofermentation.py' 2025-06-10T10:36:12,328 adding 'biorefineries/cellulosic/systems/fermentation/general_interface.py' 2025-06-10T10:36:12,330 adding 'biorefineries/cellulosic/systems/fermentation/integrated_bioprocess.py' 2025-06-10T10:36:12,331 adding 'biorefineries/cellulosic/systems/fermentation/saccharification.py' 2025-06-10T10:36:12,333 adding 'biorefineries/cellulosic/systems/fermentation/simultaneous_saccharification_cofermentation.py' 2025-06-10T10:36:12,335 adding 'biorefineries/cellulosic/systems/pretreatment/__init__.py' 2025-06-10T10:36:12,336 adding 'biorefineries/cellulosic/systems/pretreatment/alkaline.py' 2025-06-10T10:36:12,338 adding 'biorefineries/cellulosic/systems/pretreatment/ammonia_fiber_expansion.py' 2025-06-10T10:36:12,339 adding 'biorefineries/cellulosic/systems/pretreatment/dilute_acid.py' 2025-06-10T10:36:12,341 adding 'biorefineries/cellulosic/systems/pretreatment/hot_water.py' 2025-06-10T10:36:12,343 adding 'biorefineries/corn/README.md' 2025-06-10T10:36:12,344 adding 'biorefineries/corn/__init__.py' 2025-06-10T10:36:12,346 adding 'biorefineries/corn/biorefinery.py' 2025-06-10T10:36:12,347 adding 'biorefineries/corn/chemicals.py' 2025-06-10T10:36:12,349 adding 'biorefineries/corn/process_settings.py' 2025-06-10T10:36:12,351 adding 'biorefineries/corn/systems.py' 2025-06-10T10:36:12,352 adding 'biorefineries/corn/tea.py' 2025-06-10T10:36:12,354 adding 'biorefineries/corn/units.py' 2025-06-10T10:36:12,356 adding 'biorefineries/corn/utils.py' 2025-06-10T10:36:12,358 adding 'biorefineries/cornstover/README.rst' 2025-06-10T10:36:12,360 adding 'biorefineries/cornstover/__init__.py' 2025-06-10T10:36:12,361 adding 'biorefineries/cornstover/_analysis.py' 2025-06-10T10:36:12,362 adding 'biorefineries/cornstover/_chemicals.py' 2025-06-10T10:36:12,364 adding 'biorefineries/cornstover/_legacy_code.py' 2025-06-10T10:36:12,365 adding 'biorefineries/cornstover/_plot_bars.py' 2025-06-10T10:36:12,367 adding 'biorefineries/cornstover/_plot_single_point.py' 2025-06-10T10:36:12,369 adding 'biorefineries/cornstover/_plot_spearman.py' 2025-06-10T10:36:12,370 adding 'biorefineries/cornstover/_plot_uncertainty.py' 2025-06-10T10:36:12,372 adding 'biorefineries/cornstover/_process_settings.py' 2025-06-10T10:36:12,373 adding 'biorefineries/cornstover/_sankey.py' 2025-06-10T10:36:12,374 adding 'biorefineries/cornstover/_switchgrass.py' 2025-06-10T10:36:12,376 adding 'biorefineries/cornstover/_tea.py' 2025-06-10T10:36:12,377 adding 'biorefineries/cornstover/model.py' 2025-06-10T10:36:12,378 adding 'biorefineries/cornstover/systems.py' 2025-06-10T10:36:12,380 adding 'biorefineries/cornstover/units.py' 2025-06-10T10:36:12,381 adding 'biorefineries/cornstover/webapp_model.py' 2025-06-10T10:36:12,383 adding 'biorefineries/ethanol/__init__.py' 2025-06-10T10:36:12,384 adding 'biorefineries/ethanol/streams.py' 2025-06-10T10:36:12,386 adding 'biorefineries/ethanol/systems.py' 2025-06-10T10:36:12,388 adding 'biorefineries/fattyalcohols/README.rst' 2025-06-10T10:36:12,389 adding 'biorefineries/fattyalcohols/__init__.py' 2025-06-10T10:36:12,390 adding 'biorefineries/fattyalcohols/_chemicals.py' 2025-06-10T10:36:12,392 adding 'biorefineries/fattyalcohols/_fattyalcohol_production.py' 2025-06-10T10:36:12,393 adding 'biorefineries/fattyalcohols/_process_specifications.py' 2025-06-10T10:36:12,395 adding 'biorefineries/fattyalcohols/_system.py' 2025-06-10T10:36:12,396 adding 'biorefineries/fattyalcohols/_tea.py' 2025-06-10T10:36:12,397 adding 'biorefineries/fattyalcohols/chemicals.yaml' 2025-06-10T10:36:12,398 adding 'biorefineries/fattyalcohols/streams.yaml' 2025-06-10T10:36:12,399 adding 'biorefineries/fattyalcohols/utils.py' 2025-06-10T10:36:12,401 adding 'biorefineries/fattyalcohols/units/__init__.py' 2025-06-10T10:36:12,403 adding 'biorefineries/fattyalcohols/units/fatty_alcohol_bioreactor.py' 2025-06-10T10:36:12,404 adding 'biorefineries/fattyalcohols/units/slle_centrifuge.py' 2025-06-10T10:36:12,406 adding 'biorefineries/gas_fermentation/README.md' 2025-06-10T10:36:12,407 adding 'biorefineries/gas_fermentation/__init__.py' 2025-06-10T10:36:12,409 adding 'biorefineries/gas_fermentation/back_of_the_envelope_calculations.py' 2025-06-10T10:36:12,412 adding 'biorefineries/gas_fermentation/biorefinery.py' 2025-06-10T10:36:12,413 adding 'biorefineries/gas_fermentation/data.py' 2025-06-10T10:36:12,415 adding 'biorefineries/gas_fermentation/plots.py' 2025-06-10T10:36:12,417 adding 'biorefineries/gas_fermentation/process_settings.py' 2025-06-10T10:36:12,418 adding 'biorefineries/gas_fermentation/property_package.py' 2025-06-10T10:36:12,423 adding 'biorefineries/gas_fermentation/systems.py' 2025-06-10T10:36:12,424 adding 'biorefineries/gas_fermentation/tables.py' 2025-06-10T10:36:12,426 adding 'biorefineries/gas_fermentation/tests.py' 2025-06-10T10:36:12,431 adding 'biorefineries/gas_fermentation/uncertainty.py' 2025-06-10T10:36:12,433 adding 'biorefineries/gas_fermentation/units.py' 2025-06-10T10:36:12,441 adding 'biorefineries/gas_fermentation/images/AcEster_contours.svg' 2025-06-10T10:36:12,448 adding 'biorefineries/gas_fermentation/images/AcOH_contours.svg' 2025-06-10T10:36:12,518 adding 'biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.png' 2025-06-10T10:36:12,530 adding 'biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.svg' 2025-06-10T10:36:12,535 adding 'biorefineries/gas_fermentation/images/H2_contours.svg' 2025-06-10T10:36:12,612 adding 'biorefineries/gas_fermentation/images/MSP_CI_kde.png' 2025-06-10T10:36:12,692 adding 'biorefineries/gas_fermentation/images/MSP_CI_kde.svg' 2025-06-10T10:36:12,734 adding 'biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.png' 2025-06-10T10:36:12,743 adding 'biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.svg' 2025-06-10T10:36:12,788 adding 'biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.png' 2025-06-10T10:36:12,810 adding 'biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.svg' 2025-06-10T10:36:12,860 adding 'biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.png' 2025-06-10T10:36:12,884 adding 'biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.svg' 2025-06-10T10:36:12,952 adding 'biorefineries/gas_fermentation/images/configuration_kde.png' 2025-06-10T10:36:12,973 adding 'biorefineries/gas_fermentation/images/configuration_kde.svg' 2025-06-10T10:36:13,029 adding 'biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.png' 2025-06-10T10:36:13,053 adding 'biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.svg' 2025-06-10T10:36:13,131 adding 'biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.png' 2025-06-10T10:36:13,156 adding 'biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.svg' 2025-06-10T10:36:13,165 adding 'biorefineries/gas_fermentation/images/impact.png' 2025-06-10T10:36:13,172 adding 'biorefineries/gas_fermentation/images/impact.svg' 2025-06-10T10:36:13,247 adding 'biorefineries/gas_fermentation/images/impact_of_length_to_diameter.png' 2025-06-10T10:36:13,260 adding 'biorefineries/gas_fermentation/images/impact_of_length_to_diameter.svg' 2025-06-10T10:36:13,298 adding 'biorefineries/gas_fermentation/images/kde.png' 2025-06-10T10:36:13,325 adding 'biorefineries/gas_fermentation/images/kde.svg' 2025-06-10T10:36:13,348 adding 'biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.png' 2025-06-10T10:36:13,352 adding 'biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.svg' 2025-06-10T10:36:13,393 adding 'biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.png' 2025-06-10T10:36:13,401 adding 'biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.svg' 2025-06-10T10:36:13,429 adding 'biorefineries/gas_fermentation/images/montecarlo_absolute.png' 2025-06-10T10:36:13,448 adding 'biorefineries/gas_fermentation/images/montecarlo_absolute.svg' 2025-06-10T10:36:13,555 adding 'biorefineries/gas_fermentation/images/oleochemical_yield_contours.png' 2025-06-10T10:36:13,570 adding 'biorefineries/gas_fermentation/images/oleochemical_yield_contours.svg' 2025-06-10T10:36:13,576 adding 'biorefineries/gas_fermentation/images/preliminary_contour.png' 2025-06-10T10:36:13,579 adding 'biorefineries/gas_fermentation/images/preliminary_flowsheet.svg' 2025-06-10T10:36:13,582 adding 'biorefineries/gas_fermentation/images/preliminary_flowsheet_with_auxiliaries.svg' 2025-06-10T10:36:13,589 adding 'biorefineries/gas_fermentation/images/sensitivity.png' 2025-06-10T10:36:13,598 adding 'biorefineries/gas_fermentation/images/sensitivity.svg' 2025-06-10T10:36:13,637 adding 'biorefineries/gas_fermentation/images/spearman.png' 2025-06-10T10:36:13,646 adding 'biorefineries/gas_fermentation/images/spearman.svg' 2025-06-10T10:36:13,685 adding 'biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.png' 2025-06-10T10:36:13,694 adding 'biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.svg' 2025-06-10T10:36:13,727 adding 'biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.png' 2025-06-10T10:36:13,735 adding 'biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.svg' 2025-06-10T10:36:13,779 adding 'biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.png' 2025-06-10T10:36:13,789 adding 'biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.svg' 2025-06-10T10:36:13,794 adding 'biorefineries/gas_fermentation/images/uncertainty.png' 2025-06-10T10:36:13,796 adding 'biorefineries/gas_fermentation/notebooks/arpa_e_project.py' 2025-06-10T10:36:13,799 adding 'biorefineries/gas_fermentation/results/MSP_GWP_oleochemical_yield.npy' 2025-06-10T10:36:13,800 adding 'biorefineries/gas_fermentation/results/MSP_GWP_oleochemical_yield_and_price.npy' 2025-06-10T10:36:13,819 adding 'biorefineries/gas_fermentation/results/all fermentation-acetate growth_1000' 2025-06-10T10:36:13,910 adding 'biorefineries/gas_fermentation/results/all fermentation-acetate growth_5000' 2025-06-10T10:36:14,283 adding 'biorefineries/gas_fermentation/results/all fermentation-acetate growth_detailed_report.xlsx' 2025-06-10T10:36:14,482 adding 'biorefineries/gas_fermentation/results/all fermentation-acetate growth_monte_carlo.xlsx' 2025-06-10T10:36:14,493 adding 'biorefineries/gas_fermentation/results/all fermentation-acetate growth_spearman.xlsx' 2025-06-10T10:36:14,511 adding 'biorefineries/gas_fermentation/results/all fermentation-glucose growth_1000' 2025-06-10T10:36:14,602 adding 'biorefineries/gas_fermentation/results/all fermentation-glucose growth_5000' 2025-06-10T10:36:15,036 adding 'biorefineries/gas_fermentation/results/all fermentation-glucose growth_detailed_report.xlsx' 2025-06-10T10:36:15,238 adding 'biorefineries/gas_fermentation/results/all fermentation-glucose growth_monte_carlo.xlsx' 2025-06-10T10:36:15,253 adding 'biorefineries/gas_fermentation/results/all fermentation-glucose growth_monte_carlo_across_H2_price.xlsx' 2025-06-10T10:36:15,269 adding 'biorefineries/gas_fermentation/results/all fermentation-glucose growth_monte_carlo_across_bioreactor_yield.xlsx' 2025-06-10T10:36:15,271 adding 'biorefineries/gas_fermentation/results/all fermentation-glucose growth_spearman.xlsx' 2025-06-10T10:36:15,363 adding 'biorefineries/gas_fermentation/results/all-acetate growth_5000' 2025-06-10T10:36:15,547 adding 'biorefineries/gas_fermentation/results/all-acetate growth_monte_carlo.xlsx' 2025-06-10T10:36:15,558 adding 'biorefineries/gas_fermentation/results/all-acetate growth_spearman.xlsx' 2025-06-10T10:36:15,649 adding 'biorefineries/gas_fermentation/results/all-glucose growth_5000' 2025-06-10T10:36:15,831 adding 'biorefineries/gas_fermentation/results/all-glucose growth_monte_carlo.xlsx' 2025-06-10T10:36:15,842 adding 'biorefineries/gas_fermentation/results/all-glucose growth_spearman.xlsx' 2025-06-10T10:36:15,848 adding 'biorefineries/gas_fermentation/results/baseline yield-glucose growth_monte_carlo_across_H2_price.xlsx' 2025-06-10T10:36:15,850 adding 'biorefineries/gas_fermentation/results/distributions.xlsx' 2025-06-10T10:36:15,852 adding 'biorefineries/gas_fermentation/results/expenditures.xlsx' 2025-06-10T10:36:15,854 adding 'biorefineries/gas_fermentation/results/life_cycle.xlsx' 2025-06-10T10:36:15,860 adding 'biorefineries/gas_fermentation/results/potential yield-glucose growth_monte_carlo_across_H2_price.xlsx' 2025-06-10T10:36:15,863 adding 'biorefineries/lactic/README.rst' 2025-06-10T10:36:15,865 adding 'biorefineries/lactic/__init__.py' 2025-06-10T10:36:15,867 adding 'biorefineries/lactic/_chemicals.py' 2025-06-10T10:36:15,869 adding 'biorefineries/lactic/_process_settings.py' 2025-06-10T10:36:15,874 adding 'biorefineries/lactic/_processes.py' 2025-06-10T10:36:15,875 adding 'biorefineries/lactic/_profile.py' 2025-06-10T10:36:15,877 adding 'biorefineries/lactic/_tea.py' 2025-06-10T10:36:15,884 adding 'biorefineries/lactic/_units.py' 2025-06-10T10:36:15,886 adding 'biorefineries/lactic/models.py' 2025-06-10T10:36:15,888 adding 'biorefineries/lactic/systems.py' 2025-06-10T10:36:15,890 adding 'biorefineries/lactic/utils.py' 2025-06-10T10:36:15,893 adding 'biorefineries/lactic/analyses/1_uncertainties.py' 2025-06-10T10:36:15,894 adding 'biorefineries/lactic/analyses/2_fermentation_TRY.py' 2025-06-10T10:36:15,896 adding 'biorefineries/lactic/analyses/3_feedstock_carb-price.py' 2025-06-10T10:36:15,898 adding 'biorefineries/lipidcane/README.rst' 2025-06-10T10:36:15,900 adding 'biorefineries/lipidcane/__init__.py' 2025-06-10T10:36:15,901 adding 'biorefineries/lipidcane/_analysis.py' 2025-06-10T10:36:15,902 adding 'biorefineries/lipidcane/_chemicals.py' 2025-06-10T10:36:15,904 adding 'biorefineries/lipidcane/_feedstock_analysis.py' 2025-06-10T10:36:15,905 adding 'biorefineries/lipidcane/_plot_spearman.py' 2025-06-10T10:36:15,907 adding 'biorefineries/lipidcane/_plot_uncertainty.py' 2025-06-10T10:36:15,908 adding 'biorefineries/lipidcane/_process_settings.py' 2025-06-10T10:36:15,909 adding 'biorefineries/lipidcane/_system.py' 2025-06-10T10:36:15,910 adding 'biorefineries/lipidcane/_tea.py' 2025-06-10T10:36:15,912 adding 'biorefineries/lipidcane/_webapp_model.py' 2025-06-10T10:36:15,913 adding 'biorefineries/lipidcane/model.py' 2025-06-10T10:36:16,352 adding 'biorefineries/lipidcane/sankey_plot.ipynb' 2025-06-10T10:36:16,555 adding 'biorefineries/milk/GalactoOligoSaccharideProcess.xlsx' 2025-06-10T10:36:16,566 adding 'biorefineries/milk/README.md' 2025-06-10T10:36:16,567 adding 'biorefineries/milk/__init__.py' 2025-06-10T10:36:16,569 adding 'biorefineries/milk/biorefinery.py' 2025-06-10T10:36:16,571 adding 'biorefineries/milk/chemicals.py' 2025-06-10T10:36:16,572 adding 'biorefineries/milk/data.py' 2025-06-10T10:36:16,574 adding 'biorefineries/milk/plots.py' 2025-06-10T10:36:16,575 adding 'biorefineries/milk/process_settings.py' 2025-06-10T10:36:16,577 adding 'biorefineries/milk/systems.py' 2025-06-10T10:36:16,578 adding 'biorefineries/milk/tests.py' 2025-06-10T10:36:16,582 adding 'biorefineries/milk/uncertainty.py' 2025-06-10T10:36:16,583 adding 'biorefineries/milk/units.py' 2025-06-10T10:36:16,629 adding 'biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.png' 2025-06-10T10:36:16,638 adding 'biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.svg' 2025-06-10T10:36:16,684 adding 'biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.png' 2025-06-10T10:36:16,694 adding 'biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.svg' 2025-06-10T10:36:16,759 adding 'biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.png' 2025-06-10T10:36:16,770 adding 'biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.svg' 2025-06-10T10:36:16,773 adding 'biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_GlucoseMedia.npy' 2025-06-10T10:36:16,774 adding 'biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate.npy' 2025-06-10T10:36:16,777 adding 'biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate_GlucoseMedia.npy' 2025-06-10T10:36:16,779 adding 'biorefineries/oilcane/README.md' 2025-06-10T10:36:16,781 adding 'biorefineries/oilcane/__init__.py' 2025-06-10T10:36:16,782 adding 'biorefineries/oilcane/_chemicals.py' 2025-06-10T10:36:16,784 adding 'biorefineries/oilcane/_contour_plots.py' 2025-06-10T10:36:16,786 adding 'biorefineries/oilcane/_evaluation.py' 2025-06-10T10:36:16,787 adding 'biorefineries/oilcane/_feature_mockups.py' 2025-06-10T10:36:16,789 adding 'biorefineries/oilcane/_line_plots.py' 2025-06-10T10:36:16,791 adding 'biorefineries/oilcane/_load_data.py' 2025-06-10T10:36:16,793 adding 'biorefineries/oilcane/_parse_configuration.py' 2025-06-10T10:36:16,794 adding 'biorefineries/oilcane/_tables.py' 2025-06-10T10:36:16,796 adding 'biorefineries/oilcane/_tea.py' 2025-06-10T10:36:16,802 adding 'biorefineries/oilcane/_uncertainty_plots.py' 2025-06-10T10:36:16,803 adding 'biorefineries/oilcane/lca_benchmarks.py' 2025-06-10T10:36:17,270 adding 'biorefineries/oilcane/sankey_energy.ipynb' 2025-06-10T10:36:17,298 adding 'biorefineries/oilcane/sankey_plot.ipynb' 2025-06-10T10:36:17,300 adding 'biorefineries/oilcane/systems.py' 2025-06-10T10:36:17,301 adding 'biorefineries/oilcane/units.py' 2025-06-10T10:36:17,303 adding 'biorefineries/oilcane/utils.py' 2025-06-10T10:36:17,305 adding 'biorefineries/oilcane/webapp_model.py' 2025-06-10T10:36:17,307 adding 'biorefineries/sugarcane/README.rst' 2025-06-10T10:36:17,308 adding 'biorefineries/sugarcane/__init__.py' 2025-06-10T10:36:17,309 adding 'biorefineries/sugarcane/_chemicals.py' 2025-06-10T10:36:17,311 adding 'biorefineries/sugarcane/_process_settings.py' 2025-06-10T10:36:17,312 adding 'biorefineries/sugarcane/_tea.py' 2025-06-10T10:36:17,314 adding 'biorefineries/sugarcane/model.py' 2025-06-10T10:36:17,315 adding 'biorefineries/sugarcane/systems.py' 2025-06-10T10:36:17,316 adding 'biorefineries/tea/__init__.py' 2025-06-10T10:36:17,318 adding 'biorefineries/tea/cellulosic_ethanol_tea.py' 2025-06-10T10:36:17,320 adding 'biorefineries/tea/conventional_ethanol_tea.py' 2025-06-10T10:36:17,322 adding 'biorefineries/tests/__init__.py' 2025-06-10T10:36:17,323 adding 'biorefineries/tests/run_readmes.py' 2025-06-10T10:36:17,325 adding 'biorefineries/tests/test_biorefineries.py' 2025-06-10T10:36:17,328 adding 'biorefineries-2.34.7.dist-info/licenses/LICENSE.txt' 2025-06-10T10:36:17,329 adding 'biorefineries-2.34.7.dist-info/METADATA' 2025-06-10T10:36:17,330 adding 'biorefineries-2.34.7.dist-info/WHEEL' 2025-06-10T10:36:17,331 adding 'biorefineries-2.34.7.dist-info/top_level.txt' 2025-06-10T10:36:17,336 adding 'biorefineries-2.34.7.dist-info/RECORD' 2025-06-10T10:36:17,627 removing build/bdist.linux-armv7l/wheel 2025-06-10T10:36:17,833 Building wheel for biorefineries (setup.py): finished with status 'done' 2025-06-10T10:36:18,117 Created wheel for biorefineries: filename=biorefineries-2.34.7-py3-none-any.whl size=28274795 sha256=1bb2dd8eb91dbb2085d82e24a98c0ed5f16a58523fb53d13f57895848398d1d8 2025-06-10T10:36:18,118 Stored in directory: /tmp/pip-ephem-wheel-cache-wnevlm9h/wheels/22/6e/e5/6c1be63c17b2cb7a47d6033a23e2a655e5ee2c2c17408ba09c 2025-06-10T10:36:18,148 Successfully built biorefineries 2025-06-10T10:36:18,940 Removed build tracker: '/tmp/pip-build-tracker-dcwdthsz'