2025-06-10T17:06:18,108 Created temporary directory: /tmp/pip-build-tracker-a1x75tl9
2025-06-10T17:06:18,110 Initialized build tracking at /tmp/pip-build-tracker-a1x75tl9
2025-06-10T17:06:18,110 Created build tracker: /tmp/pip-build-tracker-a1x75tl9
2025-06-10T17:06:18,111 Entered build tracker: /tmp/pip-build-tracker-a1x75tl9
2025-06-10T17:06:18,112 Created temporary directory: /tmp/pip-wheel-11e7ansu
2025-06-10T17:06:18,116 Created temporary directory: /tmp/pip-ephem-wheel-cache-kzuk3da5
2025-06-10T17:06:18,165 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-06-10T17:06:18,168 2 location(s) to search for versions of td2:
2025-06-10T17:06:18,168 * https://pypi.org/simple/td2/
2025-06-10T17:06:18,168 * https://www.piwheels.org/simple/td2/
2025-06-10T17:06:18,169 Fetching project page and analyzing links: https://pypi.org/simple/td2/
2025-06-10T17:06:18,170 Getting page https://pypi.org/simple/td2/
2025-06-10T17:06:18,171 Found index url https://pypi.org/simple/
2025-06-10T17:06:18,324 Fetched page https://pypi.org/simple/td2/ as application/vnd.pypi.simple.v1+json
2025-06-10T17:06:18,327   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/43/52/258b0d913bfa795951cd68eb8f202e56bb686e2ac215bd537f5e5d8523a9/TD2-0.1.0-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:>=3.8)
2025-06-10T17:06:18,328   Found link https://files.pythonhosted.org/packages/ad/37/151603746c26b5ef38676339bbf67afdb530888937fbb8e1e775f27208ac/td2-0.1.0.tar.gz (from https://pypi.org/simple/td2/) (requires-python:>=3.8), version: 0.1.0
2025-06-10T17:06:18,329   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/f6/f9/c52c232ea9f0677a8dcc8372c808f2db059730d017e5081a1c0ce151398c/TD2-1.0.0-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-10T17:06:18,330   Found link https://files.pythonhosted.org/packages/42/df/2123f303f9668376b0783d67b0dc1d77ab320fcd7cd6499b54d2bbdf24ee/td2-1.0.0.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.0
2025-06-10T17:06:18,331   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/ff/a4/ab6be14acf5c1f585afc4881d8fc05f1aa2ba8985326d9af761acf9feaa4/td2-1.0.1-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-10T17:06:18,332   Found link https://files.pythonhosted.org/packages/27/76/0de889e7ac948b0a6c8de999fac74484afebb986c22a31f1541ed61cf3a9/td2-1.0.1.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.1
2025-06-10T17:06:18,332   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/0b/85/7fa6d4c7d930f86d60ad89ece226cabe83198b2f640b4936c9b826934d8e/TD2-1.0.2-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-10T17:06:18,333   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/59/7f/c557088b575b11b930a810c4b08d7947c231bfbd6083e23691ab6d4f35d7/td2-1.0.2-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-10T17:06:18,334   Found link https://files.pythonhosted.org/packages/03/86/7cacd5aebbaf6de14d05cd2c46ab4d8214bd5674713e018237f19510054f/td2-1.0.2.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.2
2025-06-10T17:06:18,334   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/9c/12/08401c017e913b8fd32b212039af4a257aad486f53600624d391560eb554/TD2-1.0.3-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-10T17:06:18,335   Found link https://files.pythonhosted.org/packages/f1/d4/7572f90f0da85e70bd129c15ed61ae301c5897b5e65d3156c602cf62fa1a/td2-1.0.3.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.3
2025-06-10T17:06:18,336   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/c3/e0/adcb22d02f8881bdfce4a3c89003203115487946a2015cb5350d7c8884f3/TD2-1.0.5-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-10T17:06:18,336   Found link https://files.pythonhosted.org/packages/d6/33/ef87f351e48b90f3fe892c982e721592fdbbf7b40d9bf34faf0a3a13198b/td2-1.0.5.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.5
2025-06-10T17:06:18,337   Skipping link: No binaries permitted for td2: https://files.pythonhosted.org/packages/ab/bc/6cb935774ae1b624faff92638a3422f0f12aeaf5f61ff820adbbd36464fc/td2-1.0.6-py3-none-any.whl (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9)
2025-06-10T17:06:18,338   Found link https://files.pythonhosted.org/packages/ef/4f/51dd7d1bd195d6e58d3efca71051ccd24219e3ad7c50098ecd63d9d83970/td2-1.0.6.tar.gz (from https://pypi.org/simple/td2/) (requires-python:<3.13,>=3.9), version: 1.0.6
2025-06-10T17:06:18,338 Fetching project page and analyzing links: https://www.piwheels.org/simple/td2/
2025-06-10T17:06:18,339 Getting page https://www.piwheels.org/simple/td2/
2025-06-10T17:06:18,340 Found index url https://www.piwheels.org/simple/
2025-06-10T17:06:18,505 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/td2/
2025-06-10T17:06:19,161 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/td2/
2025-06-10T17:06:20,319 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/td2/
2025-06-10T17:06:22,480 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/td2/
2025-06-10T17:06:26,640 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/td2/
2025-06-10T17:06:26,799 Could not fetch URL https://www.piwheels.org/simple/td2/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/td2/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping
2025-06-10T17:06:26,801 Skipping link: not a file: https://www.piwheels.org/simple/td2/
2025-06-10T17:06:26,801 Skipping link: not a file: https://pypi.org/simple/td2/
2025-06-10T17:06:26,821 Given no hashes to check 1 links for project 'td2': discarding no candidates
2025-06-10T17:06:26,823 Collecting td2==1.0.5
2025-06-10T17:06:26,825   Created temporary directory: /tmp/pip-unpack-bug0rxaa
2025-06-10T17:06:27,049   Downloading td2-1.0.5.tar.gz (38 kB)
2025-06-10T17:06:27,219   Added td2==1.0.5 from https://files.pythonhosted.org/packages/d6/33/ef87f351e48b90f3fe892c982e721592fdbbf7b40d9bf34faf0a3a13198b/td2-1.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-a1x75tl9'
2025-06-10T17:06:27,221   Running setup.py (path:/tmp/pip-wheel-11e7ansu/td2_030cafb0b33944e9a26af4b36f9a14ff/setup.py) egg_info for package td2
2025-06-10T17:06:27,222   Created temporary directory: /tmp/pip-pip-egg-info-p02qck34
2025-06-10T17:06:27,223   Preparing metadata (setup.py): started
2025-06-10T17:06:27,224   Running command python setup.py egg_info
2025-06-10T17:06:28,179   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-10T17:06:28,179   !!

2025-06-10T17:06:28,181           ********************************************************************************
2025-06-10T17:06:28,181           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-10T17:06:28,182           License :: OSI Approved :: MIT License

2025-06-10T17:06:28,183           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-10T17:06:28,184           ********************************************************************************

2025-06-10T17:06:28,185   !!
2025-06-10T17:06:28,185     self._finalize_license_expression()
2025-06-10T17:06:28,209   running egg_info
2025-06-10T17:06:28,237   creating /tmp/pip-pip-egg-info-p02qck34/TD2.egg-info
2025-06-10T17:06:28,238   writing /tmp/pip-pip-egg-info-p02qck34/TD2.egg-info/PKG-INFO
2025-06-10T17:06:28,244   writing dependency_links to /tmp/pip-pip-egg-info-p02qck34/TD2.egg-info/dependency_links.txt
2025-06-10T17:06:28,245   writing entry points to /tmp/pip-pip-egg-info-p02qck34/TD2.egg-info/entry_points.txt
2025-06-10T17:06:28,248   writing requirements to /tmp/pip-pip-egg-info-p02qck34/TD2.egg-info/requires.txt
2025-06-10T17:06:28,249   writing top-level names to /tmp/pip-pip-egg-info-p02qck34/TD2.egg-info/top_level.txt
2025-06-10T17:06:28,250   writing manifest file '/tmp/pip-pip-egg-info-p02qck34/TD2.egg-info/SOURCES.txt'
2025-06-10T17:06:28,358   reading manifest file '/tmp/pip-pip-egg-info-p02qck34/TD2.egg-info/SOURCES.txt'
2025-06-10T17:06:28,359   reading manifest template 'MANIFEST.in'
2025-06-10T17:06:28,360   warning: no files found matching 'tables/table_*.json'
2025-06-10T17:06:28,361   adding license file 'LICENSE.txt'
2025-06-10T17:06:28,365   writing manifest file '/tmp/pip-pip-egg-info-p02qck34/TD2.egg-info/SOURCES.txt'
2025-06-10T17:06:28,474   Preparing metadata (setup.py): finished with status 'done'
2025-06-10T17:06:28,478   Source in /tmp/pip-wheel-11e7ansu/td2_030cafb0b33944e9a26af4b36f9a14ff has version 1.0.5, which satisfies requirement td2==1.0.5 from https://files.pythonhosted.org/packages/d6/33/ef87f351e48b90f3fe892c982e721592fdbbf7b40d9bf34faf0a3a13198b/td2-1.0.5.tar.gz
2025-06-10T17:06:28,479   Removed td2==1.0.5 from https://files.pythonhosted.org/packages/d6/33/ef87f351e48b90f3fe892c982e721592fdbbf7b40d9bf34faf0a3a13198b/td2-1.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-a1x75tl9'
2025-06-10T17:06:28,489 Created temporary directory: /tmp/pip-unpack-ggwwzkvz
2025-06-10T17:06:28,490 Created temporary directory: /tmp/pip-unpack-7opu0kaf
2025-06-10T17:06:28,491 Building wheels for collected packages: td2
2025-06-10T17:06:28,495   Created temporary directory: /tmp/pip-wheel-crbv4ws_
2025-06-10T17:06:28,496   DEPRECATION: Building 'td2' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'td2'. Discussion can be found at https://github.com/pypa/pip/issues/6334
2025-06-10T17:06:28,497   Building wheel for td2 (setup.py): started
2025-06-10T17:06:28,499   Destination directory: /tmp/pip-wheel-crbv4ws_
2025-06-10T17:06:28,499   Running command python setup.py bdist_wheel
2025-06-10T17:06:29,360   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-10T17:06:29,361   !!

2025-06-10T17:06:29,362           ********************************************************************************
2025-06-10T17:06:29,363           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-10T17:06:29,364           License :: OSI Approved :: MIT License

2025-06-10T17:06:29,365           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-10T17:06:29,366           ********************************************************************************

2025-06-10T17:06:29,367   !!
2025-06-10T17:06:29,368     self._finalize_license_expression()
2025-06-10T17:06:29,368   running bdist_wheel
2025-06-10T17:06:29,503   running build
2025-06-10T17:06:29,504   running build_py
2025-06-10T17:06:29,536   creating build/lib/api
2025-06-10T17:06:29,539   copying api/__init__.py -> build/lib/api
2025-06-10T17:06:29,541   creating build/lib/TD2
2025-06-10T17:06:29,542   copying TD2/__init__.py -> build/lib/TD2
2025-06-10T17:06:29,544   copying TD2/translator.py -> build/lib/TD2
2025-06-10T17:06:29,547   copying TD2/LongOrfs.py -> build/lib/TD2
2025-06-10T17:06:29,549   copying TD2/Predict.py -> build/lib/TD2
2025-06-10T17:06:29,552   copying TD2/help.py -> build/lib/TD2
2025-06-10T17:06:29,554   copying TD2/get_tables.py -> build/lib/TD2
2025-06-10T17:06:29,557   creating build/lib/tests
2025-06-10T17:06:29,559   copying tests/__init__.py -> build/lib/tests
2025-06-10T17:06:29,560   copying tests/visualize_mane_composition.py -> build/lib/tests
2025-06-10T17:06:29,562   copying tests/visualize_benchmark.py -> build/lib/tests
2025-06-10T17:06:29,564   copying tests/compare_peps.py -> build/lib/tests
2025-06-10T17:06:29,567   copying tests/test_translate.py -> build/lib/tests
2025-06-10T17:06:29,569   copying tests/test_find_orfs_real.py -> build/lib/tests
2025-06-10T17:06:29,571   copying tests/partition_mane.py -> build/lib/tests
2025-06-10T17:06:29,573   copying tests/longorfs_low_memory.py -> build/lib/tests
2025-06-10T17:06:29,576   copying tests/ambiguous_codon_test.py -> build/lib/tests
2025-06-10T17:06:29,578   copying tests/visualize_chess.py -> build/lib/tests
2025-06-10T17:06:29,580   copying tests/test_find_orfs.py -> build/lib/tests
2025-06-10T17:06:29,582   copying tests/test_reverse_complement.py -> build/lib/tests
2025-06-10T17:06:29,584   creating build/lib/TD2/tables
2025-06-10T17:06:29,585   copying TD2/tables/__init__.py -> build/lib/TD2/tables
2025-06-10T17:06:29,588   creating build/lib/tests/data
2025-06-10T17:06:29,589   copying tests/data/__init__.py -> build/lib/tests/data
2025-06-10T17:06:29,590   running egg_info
2025-06-10T17:06:29,619   writing TD2.egg-info/PKG-INFO
2025-06-10T17:06:29,624   writing dependency_links to TD2.egg-info/dependency_links.txt
2025-06-10T17:06:29,626   writing entry points to TD2.egg-info/entry_points.txt
2025-06-10T17:06:29,629   writing requirements to TD2.egg-info/requires.txt
2025-06-10T17:06:29,630   writing top-level names to TD2.egg-info/top_level.txt
2025-06-10T17:06:29,676   reading manifest file 'TD2.egg-info/SOURCES.txt'
2025-06-10T17:06:29,681   reading manifest template 'MANIFEST.in'
2025-06-10T17:06:29,681   warning: no files found matching 'tables/table_*.json'
2025-06-10T17:06:29,682   adding license file 'LICENSE.txt'
2025-06-10T17:06:29,686   writing manifest file 'TD2.egg-info/SOURCES.txt'
2025-06-10T17:06:29,702   copying TD2/tables/table_1.json -> build/lib/TD2/tables
2025-06-10T17:06:29,704   copying TD2/tables/table_2.json -> build/lib/TD2/tables
2025-06-10T17:06:29,707   copying TD2/tables/table_3.json -> build/lib/TD2/tables
2025-06-10T17:06:29,709   copying TD2/tables/table_4.json -> build/lib/TD2/tables
2025-06-10T17:06:29,712   copying TD2/tables/table_5.json -> build/lib/TD2/tables
2025-06-10T17:06:29,714   copying TD2/tables/table_6.json -> build/lib/TD2/tables
2025-06-10T17:06:29,717   copying TD2/tables/table_9.json -> build/lib/TD2/tables
2025-06-10T17:06:29,720   copying TD2/tables/table_10.json -> build/lib/TD2/tables
2025-06-10T17:06:29,722   copying TD2/tables/table_11.json -> build/lib/TD2/tables
2025-06-10T17:06:29,725   copying TD2/tables/table_12.json -> build/lib/TD2/tables
2025-06-10T17:06:29,727   copying TD2/tables/table_13.json -> build/lib/TD2/tables
2025-06-10T17:06:29,730   copying TD2/tables/table_14.json -> build/lib/TD2/tables
2025-06-10T17:06:29,732   copying TD2/tables/table_15.json -> build/lib/TD2/tables
2025-06-10T17:06:29,735   copying TD2/tables/table_16.json -> build/lib/TD2/tables
2025-06-10T17:06:29,737   copying TD2/tables/table_21.json -> build/lib/TD2/tables
2025-06-10T17:06:29,740   copying TD2/tables/table_22.json -> build/lib/TD2/tables
2025-06-10T17:06:29,742   copying TD2/tables/table_23.json -> build/lib/TD2/tables
2025-06-10T17:06:29,744   copying TD2/tables/table_24.json -> build/lib/TD2/tables
2025-06-10T17:06:29,747   copying TD2/tables/table_25.json -> build/lib/TD2/tables
2025-06-10T17:06:29,749   copying TD2/tables/table_26.json -> build/lib/TD2/tables
2025-06-10T17:06:29,752   copying TD2/tables/table_27.json -> build/lib/TD2/tables
2025-06-10T17:06:29,754   copying TD2/tables/table_28.json -> build/lib/TD2/tables
2025-06-10T17:06:29,756   copying TD2/tables/table_29.json -> build/lib/TD2/tables
2025-06-10T17:06:29,759   copying TD2/tables/table_30.json -> build/lib/TD2/tables
2025-06-10T17:06:29,761   copying TD2/tables/table_31.json -> build/lib/TD2/tables
2025-06-10T17:06:29,763   copying TD2/tables/table_33.json -> build/lib/TD2/tables
2025-06-10T17:06:29,809   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2025-06-10T17:06:29,810   !!

2025-06-10T17:06:29,811           ********************************************************************************
2025-06-10T17:06:29,811           Please avoid running ``setup.py`` directly.
2025-06-10T17:06:29,812           Instead, use pypa/build, pypa/installer or other
2025-06-10T17:06:29,812           standards-based tools.

2025-06-10T17:06:29,813           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-06-10T17:06:29,814           or your builds will no longer be supported.

2025-06-10T17:06:29,815           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2025-06-10T17:06:29,816           ********************************************************************************

2025-06-10T17:06:29,817   !!
2025-06-10T17:06:29,818     self.initialize_options()
2025-06-10T17:06:29,840   installing to build/bdist.linux-armv7l/wheel
2025-06-10T17:06:29,841   running install
2025-06-10T17:06:29,865   running install_lib
2025-06-10T17:06:29,895   creating build/bdist.linux-armv7l/wheel
2025-06-10T17:06:29,897   creating build/bdist.linux-armv7l/wheel/api
2025-06-10T17:06:29,898   copying build/lib/api/__init__.py -> build/bdist.linux-armv7l/wheel/./api
2025-06-10T17:06:29,901   creating build/bdist.linux-armv7l/wheel/TD2
2025-06-10T17:06:29,902   copying build/lib/TD2/__init__.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-10T17:06:29,904   copying build/lib/TD2/translator.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-10T17:06:29,906   copying build/lib/TD2/LongOrfs.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-10T17:06:29,909   copying build/lib/TD2/Predict.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-10T17:06:29,913   creating build/bdist.linux-armv7l/wheel/TD2/tables
2025-06-10T17:06:29,914   copying build/lib/TD2/tables/table_3.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,917   copying build/lib/TD2/tables/__init__.py -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,918   copying build/lib/TD2/tables/table_29.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,920   copying build/lib/TD2/tables/table_31.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,922   copying build/lib/TD2/tables/table_15.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,925   copying build/lib/TD2/tables/table_16.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,927   copying build/lib/TD2/tables/table_21.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,929   copying build/lib/TD2/tables/table_6.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,931   copying build/lib/TD2/tables/table_25.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,933   copying build/lib/TD2/tables/table_11.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,935   copying build/lib/TD2/tables/table_26.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,937   copying build/lib/TD2/tables/table_2.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,939   copying build/lib/TD2/tables/table_1.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,942   copying build/lib/TD2/tables/table_10.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,944   copying build/lib/TD2/tables/table_22.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,946   copying build/lib/TD2/tables/table_24.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,948   copying build/lib/TD2/tables/table_28.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,950   copying build/lib/TD2/tables/table_33.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,952   copying build/lib/TD2/tables/table_5.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,954   copying build/lib/TD2/tables/table_27.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,956   copying build/lib/TD2/tables/table_23.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,958   copying build/lib/TD2/tables/table_4.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,961   copying build/lib/TD2/tables/table_30.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,962   copying build/lib/TD2/tables/table_9.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,964   copying build/lib/TD2/tables/table_13.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,966   copying build/lib/TD2/tables/table_12.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,968   copying build/lib/TD2/tables/table_14.json -> build/bdist.linux-armv7l/wheel/./TD2/tables
2025-06-10T17:06:29,970   copying build/lib/TD2/help.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-10T17:06:29,973   copying build/lib/TD2/get_tables.py -> build/bdist.linux-armv7l/wheel/./TD2
2025-06-10T17:06:29,976   creating build/bdist.linux-armv7l/wheel/tests
2025-06-10T17:06:29,977   copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:29,979   copying build/lib/tests/visualize_mane_composition.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:29,981   copying build/lib/tests/visualize_benchmark.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:29,983   copying build/lib/tests/compare_peps.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:29,986   copying build/lib/tests/test_translate.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:29,988   copying build/lib/tests/test_find_orfs_real.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:29,990   copying build/lib/tests/partition_mane.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:29,993   copying build/lib/tests/longorfs_low_memory.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:29,996   copying build/lib/tests/ambiguous_codon_test.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:29,998   copying build/lib/tests/visualize_chess.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:30,001   creating build/bdist.linux-armv7l/wheel/tests/data
2025-06-10T17:06:30,002   copying build/lib/tests/data/__init__.py -> build/bdist.linux-armv7l/wheel/./tests/data
2025-06-10T17:06:30,004   copying build/lib/tests/test_find_orfs.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:30,006   copying build/lib/tests/test_reverse_complement.py -> build/bdist.linux-armv7l/wheel/./tests
2025-06-10T17:06:30,009   running install_egg_info
2025-06-10T17:06:30,048   Copying TD2.egg-info to build/bdist.linux-armv7l/wheel/./TD2-1.0.5-py3.11.egg-info
2025-06-10T17:06:30,063   running install_scripts
2025-06-10T17:06:30,077   creating build/bdist.linux-armv7l/wheel/td2-1.0.5.dist-info/WHEEL
2025-06-10T17:06:30,079   creating '/tmp/pip-wheel-crbv4ws_/td2-1.0.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-06-10T17:06:30,084   adding 'TD2/LongOrfs.py'
2025-06-10T17:06:30,088   adding 'TD2/Predict.py'
2025-06-10T17:06:30,089   adding 'TD2/__init__.py'
2025-06-10T17:06:30,091   adding 'TD2/get_tables.py'
2025-06-10T17:06:30,092   adding 'TD2/help.py'
2025-06-10T17:06:30,094   adding 'TD2/translator.py'
2025-06-10T17:06:30,096   adding 'TD2/tables/__init__.py'
2025-06-10T17:06:30,098   adding 'TD2/tables/table_1.json'
2025-06-10T17:06:30,099   adding 'TD2/tables/table_10.json'
2025-06-10T17:06:30,101   adding 'TD2/tables/table_11.json'
2025-06-10T17:06:30,102   adding 'TD2/tables/table_12.json'
2025-06-10T17:06:30,103   adding 'TD2/tables/table_13.json'
2025-06-10T17:06:30,105   adding 'TD2/tables/table_14.json'
2025-06-10T17:06:30,106   adding 'TD2/tables/table_15.json'
2025-06-10T17:06:30,108   adding 'TD2/tables/table_16.json'
2025-06-10T17:06:30,109   adding 'TD2/tables/table_2.json'
2025-06-10T17:06:30,111   adding 'TD2/tables/table_21.json'
2025-06-10T17:06:30,112   adding 'TD2/tables/table_22.json'
2025-06-10T17:06:30,114   adding 'TD2/tables/table_23.json'
2025-06-10T17:06:30,115   adding 'TD2/tables/table_24.json'
2025-06-10T17:06:30,117   adding 'TD2/tables/table_25.json'
2025-06-10T17:06:30,118   adding 'TD2/tables/table_26.json'
2025-06-10T17:06:30,119   adding 'TD2/tables/table_27.json'
2025-06-10T17:06:30,121   adding 'TD2/tables/table_28.json'
2025-06-10T17:06:30,122   adding 'TD2/tables/table_29.json'
2025-06-10T17:06:30,124   adding 'TD2/tables/table_3.json'
2025-06-10T17:06:30,125   adding 'TD2/tables/table_30.json'
2025-06-10T17:06:30,126   adding 'TD2/tables/table_31.json'
2025-06-10T17:06:30,128   adding 'TD2/tables/table_33.json'
2025-06-10T17:06:30,129   adding 'TD2/tables/table_4.json'
2025-06-10T17:06:30,131   adding 'TD2/tables/table_5.json'
2025-06-10T17:06:30,132   adding 'TD2/tables/table_6.json'
2025-06-10T17:06:30,134   adding 'TD2/tables/table_9.json'
2025-06-10T17:06:30,135   adding 'api/__init__.py'
2025-06-10T17:06:30,138   adding 'td2-1.0.5.dist-info/licenses/LICENSE.txt'
2025-06-10T17:06:30,140   adding 'tests/__init__.py'
2025-06-10T17:06:30,142   adding 'tests/ambiguous_codon_test.py'
2025-06-10T17:06:30,143   adding 'tests/compare_peps.py'
2025-06-10T17:06:30,146   adding 'tests/longorfs_low_memory.py'
2025-06-10T17:06:30,147   adding 'tests/partition_mane.py'
2025-06-10T17:06:30,149   adding 'tests/test_find_orfs.py'
2025-06-10T17:06:30,151   adding 'tests/test_find_orfs_real.py'
2025-06-10T17:06:30,152   adding 'tests/test_reverse_complement.py'
2025-06-10T17:06:30,153   adding 'tests/test_translate.py'
2025-06-10T17:06:30,155   adding 'tests/visualize_benchmark.py'
2025-06-10T17:06:30,156   adding 'tests/visualize_chess.py'
2025-06-10T17:06:30,158   adding 'tests/visualize_mane_composition.py'
2025-06-10T17:06:30,159   adding 'tests/data/__init__.py'
2025-06-10T17:06:30,161   adding 'td2-1.0.5.dist-info/METADATA'
2025-06-10T17:06:30,162   adding 'td2-1.0.5.dist-info/WHEEL'
2025-06-10T17:06:30,163   adding 'td2-1.0.5.dist-info/entry_points.txt'
2025-06-10T17:06:30,164   adding 'td2-1.0.5.dist-info/top_level.txt'
2025-06-10T17:06:30,165   adding 'td2-1.0.5.dist-info/RECORD'
2025-06-10T17:06:30,168   removing build/bdist.linux-armv7l/wheel
2025-06-10T17:06:30,295   Building wheel for td2 (setup.py): finished with status 'done'
2025-06-10T17:06:30,298   Created wheel for td2: filename=td2-1.0.5-py3-none-any.whl size=55375 sha256=09e084f02acf615c53f50a29b00bf08971b806a3ab1eb60d1019227f7e92eb7c
2025-06-10T17:06:30,300   Stored in directory: /tmp/pip-ephem-wheel-cache-kzuk3da5/wheels/d6/e5/dd/04298deb6c5ed2691a0af0f303f3d102188e27a2c424908469
2025-06-10T17:06:30,313 Successfully built td2
2025-06-10T17:06:30,318 Removed build tracker: '/tmp/pip-build-tracker-a1x75tl9'