2025-06-10T18:46:46,989 Created temporary directory: /tmp/pip-build-tracker-vtiwqyt7 2025-06-10T18:46:46,990 Initialized build tracking at /tmp/pip-build-tracker-vtiwqyt7 2025-06-10T18:46:46,991 Created build tracker: /tmp/pip-build-tracker-vtiwqyt7 2025-06-10T18:46:46,991 Entered build tracker: /tmp/pip-build-tracker-vtiwqyt7 2025-06-10T18:46:46,992 Created temporary directory: /tmp/pip-wheel-r6l9yeoa 2025-06-10T18:46:46,996 Created temporary directory: /tmp/pip-ephem-wheel-cache-mdx5vsbp 2025-06-10T18:46:47,045 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-06-10T18:46:47,048 2 location(s) to search for versions of dendropy: 2025-06-10T18:46:47,048 * https://pypi.org/simple/dendropy/ 2025-06-10T18:46:47,048 * https://www.piwheels.org/simple/dendropy/ 2025-06-10T18:46:47,049 Fetching project page and analyzing links: https://pypi.org/simple/dendropy/ 2025-06-10T18:46:47,049 Getting page https://pypi.org/simple/dendropy/ 2025-06-10T18:46:47,051 Found index url https://pypi.org/simple/ 2025-06-10T18:46:47,279 Fetched page https://pypi.org/simple/dendropy/ as application/vnd.pypi.simple.v1+json 2025-06-10T18:46:47,284 Found link https://files.pythonhosted.org/packages/03/48/8379b3e170d60052da7ccf3387549af17d46808a39062fbb234df3038fa0/DendroPy-3.7.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.7.0 2025-06-10T18:46:47,285 Found link https://files.pythonhosted.org/packages/17/0a/914df0e24dc378acdd9cb1705c1fcfcf15dd1da8992de567a4cce85bc31e/DendroPy-3.7.1.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.7.1 2025-06-10T18:46:47,285 Found link https://files.pythonhosted.org/packages/a2/f5/5c4fb1cde35799eeacb35ac289c271371a0c0fd3197548fab7e184900cc7/DendroPy-3.8.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.8.0 2025-06-10T18:46:47,286 Found link https://files.pythonhosted.org/packages/95/73/7b1084d03e025b27c79342d6935810969edb86677ef3e5eb1f9e5aec1e6f/DendroPy-3.8.1.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.8.1 2025-06-10T18:46:47,287 Found link https://files.pythonhosted.org/packages/18/2e/141c0d6a99905b9be3256aae6a87504f14853b20e40a6d89c7c4c465769d/DendroPy-3.9.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.9.0 2025-06-10T18:46:47,288 Found link https://files.pythonhosted.org/packages/7e/08/a968b51274c8476084521f97af4e8fadd09a6b42a727141f502cc33767c5/DendroPy-3.10.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.10.0 2025-06-10T18:46:47,288 Found link https://files.pythonhosted.org/packages/3a/26/552efe612d37cff025f1dd1350eb643edd6dda1cb628d7cbe572e343a049/DendroPy-3.10.1.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.10.1 2025-06-10T18:46:47,289 Found link https://files.pythonhosted.org/packages/0f/3e/5549b668d04241c77c8f5b26f0c94a87ad93b6b9089fc6bcd510eba5d5f4/DendroPy-3.11.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.11.0 2025-06-10T18:46:47,290 Found link https://files.pythonhosted.org/packages/43/22/69b7713b094697f8a432abe96c44a155519ef67b3c31221de32f4c3d5fa5/DendroPy-3.12.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.12.0 2025-06-10T18:46:47,290 Found link https://files.pythonhosted.org/packages/5f/ae/14c92b087632944149cca61ec8daf41eee0083d0fad30c9248edb7e227d2/DendroPy-3.12.2.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.12.2 2025-06-10T18:46:47,291 Found link https://files.pythonhosted.org/packages/3d/c0/e0a20d1cf4b268757842a03f36452095fccb8eae5ebd541548e29c6ca1e3/DendroPy-3.12.3.tar.gz (from https://pypi.org/simple/dendropy/), version: 3.12.3 2025-06-10T18:46:47,292 Found link https://files.pythonhosted.org/packages/f0/d3/e0180bf1a8d599b8f847ab7a1b19fe4d7a95b3613c57b57108e2a48bb59f/DendroPy-4.0.0.rc1.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.0.0.rc1 2025-06-10T18:46:47,292 Found link https://files.pythonhosted.org/packages/55/dd/0d59b7bde4b230fadb999bc84cc45668a53733cb63e4aacf7e6ab4a9e175/DendroPy-4.0.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.0.0 2025-06-10T18:46:47,293 Found link https://files.pythonhosted.org/packages/52/ba/02652626ed0d56afadc990e6540d998217831d856170ff0c68c3afbef866/DendroPy-4.0.1.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.0.1 2025-06-10T18:46:47,294 Found link https://files.pythonhosted.org/packages/62/10/117c87b76f5f84d4559bd7ad25af04f11369ef8267f3c8e7d62769efc85d/DendroPy-4.0.2.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.0.2 2025-06-10T18:46:47,295 Found link https://files.pythonhosted.org/packages/66/0b/72ca62a6e87ddb9b70cac2cf1fc199ca00127fc168c52bcbcbf30cfb5947/DendroPy-4.0.3.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.0.3 2025-06-10T18:46:47,295 Found link https://files.pythonhosted.org/packages/65/3a/19556a58c560de488dffbf3c7fe7c9ed34c1a6223f0dfe971224a42aaf39/DendroPy-4.1.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.1.0 2025-06-10T18:46:47,296 Found link https://files.pythonhosted.org/packages/e6/5a/d48c8d3f8100efd5eb6e6142f28bf1c13200e08882e59596369035ebc138/DendroPy-4.2.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.2.0 2025-06-10T18:46:47,296 Found link https://files.pythonhosted.org/packages/58/14/d4559893d72675b322c1d60229ef3490bc5c2f5b28c5cc339956aaf8f507/DendroPy-4.3.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.3.0 2025-06-10T18:46:47,297 Found link https://files.pythonhosted.org/packages/f5/21/17e4fbb1c2a68421eec43930b1e118660c7483229f1b28ba4402e8856884/DendroPy-4.4.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.4.0 2025-06-10T18:46:47,298 Found link https://files.pythonhosted.org/packages/e0/f3/222e939e250e71234031d182e58704fff1c3296140f91f70d7ef8b3e17a6/DendroPy-4.5.1.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.5.1 2025-06-10T18:46:47,299 Found link https://files.pythonhosted.org/packages/f9/10/125c181b1d97ffc4661a60ec897cfe058dc46cb53900d807819464c3510f/DendroPy-4.5.2.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.5.2 2025-06-10T18:46:47,299 Skipping link: No binaries permitted for dendropy: https://files.pythonhosted.org/packages/b0/c0/841e46da39a4dae07a5cd4e7a1c9472acbdd623f820b125b5995dd342c9a/DendroPy-4.6.0-py3-none-any.whl (from https://pypi.org/simple/dendropy/) 2025-06-10T18:46:47,300 Found link https://files.pythonhosted.org/packages/8a/88/864aa93d31dd210e5b9bd79cfb3c9ddaf0bfab9b70dd212fb8247ab72f46/DendroPy-4.6.0.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.6.0 2025-06-10T18:46:47,301 Skipping link: No binaries permitted for dendropy: https://files.pythonhosted.org/packages/7c/3b/f880fd07cb79a46ca838e46ba021fcdaa464bb21e2a9264a7afe77046a88/DendroPy-4.6.1-py3-none-any.whl (from https://pypi.org/simple/dendropy/) 2025-06-10T18:46:47,301 Found link https://files.pythonhosted.org/packages/35/fc/0ff301d0f2484b61f2cc46cfd7649c530cad6313c7f7a695f8cabff8a061/DendroPy-4.6.1.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.6.1 2025-06-10T18:46:47,302 Skipping link: No binaries permitted for dendropy: https://files.pythonhosted.org/packages/a9/70/c715b8467b7cd08a847ad303ce8a2d236e001a526f37179fe77e503602cb/DendroPy-4.6.3-py3-none-any.whl (from https://pypi.org/simple/dendropy/) 2025-06-10T18:46:47,303 Found link https://files.pythonhosted.org/packages/52/f2/c8524894d8bbd5cfb4eca7c350e4407137bd11a752a152c62617ce6f6b76/DendroPy-4.6.3.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.6.3 2025-06-10T18:46:47,303 Skipping link: No binaries permitted for dendropy: https://files.pythonhosted.org/packages/f1/f5/fb4483829a7a9b08c974281d2519d110b69284a43dec7ae320e9971fe4f5/DendroPy-4.6.4-py3-none-any.whl (from https://pypi.org/simple/dendropy/) 2025-06-10T18:46:47,304 Found link https://files.pythonhosted.org/packages/29/7a/0e09e052a746c9e97e45d6e0803e705e13426aa01a13ab845f6108ea4fd5/DendroPy-4.6.4.tar.gz (from https://pypi.org/simple/dendropy/), version: 4.6.4 2025-06-10T18:46:47,305 Skipping link: No binaries permitted for dendropy: https://files.pythonhosted.org/packages/54/2a/e95f42bcc16806f5f5ed49ed8b613830c3831e8a1ecea845756b882672e1/DendroPy-5.0.0-py3-none-any.whl (from https://pypi.org/simple/dendropy/) (requires-python:>=3.6) 2025-06-10T18:46:47,306 Found link https://files.pythonhosted.org/packages/96/33/c3a06df7aec829e8b79b91503708d750d9c4842cfc4377ae215c1e61d97d/DendroPy-5.0.0.tar.gz (from https://pypi.org/simple/dendropy/) (requires-python:>=3.6), version: 5.0.0 2025-06-10T18:46:47,306 Skipping link: No binaries permitted for dendropy: https://files.pythonhosted.org/packages/16/96/7dcfffa89fc659669e697bcbdf01e7eac37ab0676aa242323a23366132a2/DendroPy-5.0.1-py3-none-any.whl (from https://pypi.org/simple/dendropy/) (requires-python:>=3.6) 2025-06-10T18:46:47,307 Found link https://files.pythonhosted.org/packages/42/4b/6b300d145575ac7445e3b79b5c0c3a4ea441937278528b8dbd5b0aab42fc/DendroPy-5.0.1.tar.gz (from https://pypi.org/simple/dendropy/) (requires-python:>=3.6), version: 5.0.1 2025-06-10T18:46:47,308 Skipping link: No binaries permitted for dendropy: https://files.pythonhosted.org/packages/f9/20/95c487820aac183b540c1d9d26d5778c9975015c3505137c5c5cd230a7ee/DendroPy-5.0.7-py3-none-any.whl (from https://pypi.org/simple/dendropy/) (requires-python:>=3.7) 2025-06-10T18:46:47,309 Found link https://files.pythonhosted.org/packages/63/35/150e49455d787ce95487b2f9fa1d9766054ac5df304eae3fc2d24eabf1f4/DendroPy-5.0.7.tar.gz (from https://pypi.org/simple/dendropy/) (requires-python:>=3.7), version: 5.0.7 2025-06-10T18:46:47,309 Skipping link: No binaries permitted for dendropy: https://files.pythonhosted.org/packages/29/3d/d93dfd44e8615b39fab0b939bc7d8030021c092bffb3cc3c50580e75fc8f/DendroPy-5.0.8-py3-none-any.whl (from https://pypi.org/simple/dendropy/) (requires-python:>=3.7) 2025-06-10T18:46:47,310 Found link https://files.pythonhosted.org/packages/76/e4/ea83865a284c81e58d55936578dbfaa012afd7a791a75e1105c46e928f1d/DendroPy-5.0.8.tar.gz (from https://pypi.org/simple/dendropy/) (requires-python:>=3.7), version: 5.0.8 2025-06-10T18:46:47,311 Fetching project page and analyzing links: https://www.piwheels.org/simple/dendropy/ 2025-06-10T18:46:47,311 Getting page https://www.piwheels.org/simple/dendropy/ 2025-06-10T18:46:47,313 Found index url https://www.piwheels.org/simple/ 2025-06-10T18:46:47,469 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/dendropy/ 2025-06-10T18:46:48,126 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/dendropy/ 2025-06-10T18:46:49,294 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/dendropy/ 2025-06-10T18:46:51,457 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/dendropy/ 2025-06-10T18:46:55,619 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/dendropy/ 2025-06-10T18:46:56,822 Could not fetch URL https://www.piwheels.org/simple/dendropy/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/dendropy/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-06-10T18:46:56,824 Skipping link: not a file: https://www.piwheels.org/simple/dendropy/ 2025-06-10T18:46:56,825 Skipping link: not a file: https://pypi.org/simple/dendropy/ 2025-06-10T18:46:56,846 Given no hashes to check 1 links for project 'dendropy': discarding no candidates 2025-06-10T18:46:56,848 Collecting dendropy==5.0.8 2025-06-10T18:46:56,850 Created temporary directory: /tmp/pip-unpack-oagd9vrw 2025-06-10T18:46:57,080 Downloading DendroPy-5.0.8.tar.gz (398 kB) 2025-06-10T18:46:57,522 Added dendropy==5.0.8 from https://files.pythonhosted.org/packages/76/e4/ea83865a284c81e58d55936578dbfaa012afd7a791a75e1105c46e928f1d/DendroPy-5.0.8.tar.gz to build tracker '/tmp/pip-build-tracker-vtiwqyt7' 2025-06-10T18:46:57,524 Running setup.py (path:/tmp/pip-wheel-r6l9yeoa/dendropy_ee320927c6304b3f900c28e99217e403/setup.py) egg_info for package dendropy 2025-06-10T18:46:57,525 Created temporary directory: /tmp/pip-pip-egg-info-tbbr6_7r 2025-06-10T18:46:57,525 Preparing metadata (setup.py): started 2025-06-10T18:46:57,526 Running command python setup.py egg_info 2025-06-10T18:46:58,094 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-06-10T18:46:58,094 !! 2025-06-10T18:46:58,096 ******************************************************************************** 2025-06-10T18:46:58,096 Requirements should be satisfied by a PEP 517 installer. 2025-06-10T18:46:58,097 If you are using pip, you can try `pip install --use-pep517`. 2025-06-10T18:46:58,098 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-10T18:46:58,099 or your builds will no longer be supported. 2025-06-10T18:46:58,100 ******************************************************************************** 2025-06-10T18:46:58,102 !! 2025-06-10T18:46:58,102 dist.fetch_build_eggs(dist.setup_requires) 2025-06-10T18:47:01,015 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-06-10T18:47:01,015 warnings.warn(msg) 2025-06-10T18:47:01,016 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' 2025-06-10T18:47:01,016 warnings.warn(msg) 2025-06-10T18:47:01,077 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-06-10T18:47:01,078 !! 2025-06-10T18:47:01,079 ******************************************************************************** 2025-06-10T18:47:01,080 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-06-10T18:47:01,081 License :: OSI Approved :: BSD License 2025-06-10T18:47:01,083 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-06-10T18:47:01,083 ******************************************************************************** 2025-06-10T18:47:01,084 !! 2025-06-10T18:47:01,085 self._finalize_license_expression() 2025-06-10T18:47:01,110 running egg_info 2025-06-10T18:47:01,140 creating /tmp/pip-pip-egg-info-tbbr6_7r/DendroPy.egg-info 2025-06-10T18:47:01,141 writing /tmp/pip-pip-egg-info-tbbr6_7r/DendroPy.egg-info/PKG-INFO 2025-06-10T18:47:01,145 writing dependency_links to /tmp/pip-pip-egg-info-tbbr6_7r/DendroPy.egg-info/dependency_links.txt 2025-06-10T18:47:01,147 writing entry points to /tmp/pip-pip-egg-info-tbbr6_7r/DendroPy.egg-info/entry_points.txt 2025-06-10T18:47:01,149 writing requirements to /tmp/pip-pip-egg-info-tbbr6_7r/DendroPy.egg-info/requires.txt 2025-06-10T18:47:01,150 writing top-level names to /tmp/pip-pip-egg-info-tbbr6_7r/DendroPy.egg-info/top_level.txt 2025-06-10T18:47:01,152 writing manifest file '/tmp/pip-pip-egg-info-tbbr6_7r/DendroPy.egg-info/SOURCES.txt' 2025-06-10T18:47:01,295 reading manifest file '/tmp/pip-pip-egg-info-tbbr6_7r/DendroPy.egg-info/SOURCES.txt' 2025-06-10T18:47:01,297 reading manifest template 'MANIFEST.in' 2025-06-10T18:47:01,298 warning: no files found matching 'README.rst' 2025-06-10T18:47:01,299 warning: no files found matching 'doc/Makefile' 2025-06-10T18:47:01,300 warning: no files found matching '*' under directory 'doc/source' 2025-06-10T18:47:01,300 warning: no files found matching '*' under directory 'tests/data' 2025-06-10T18:47:01,301 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2025-06-10T18:47:01,302 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2025-06-10T18:47:01,302 warning: no previously-included files matching '.gitignore' found anywhere in distribution 2025-06-10T18:47:01,303 warning: no previously-included files matching '.gitattributes' found anywhere in distribution 2025-06-10T18:47:01,304 warning: no previously-included files matching '.idea' found anywhere in distribution 2025-06-10T18:47:01,305 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2025-06-10T18:47:01,305 adding license file 'LICENSE.rst' 2025-06-10T18:47:01,306 adding license file 'NOTICES.rst' 2025-06-10T18:47:01,306 adding license file 'AUTHORS.rst' 2025-06-10T18:47:01,311 writing manifest file '/tmp/pip-pip-egg-info-tbbr6_7r/DendroPy.egg-info/SOURCES.txt' 2025-06-10T18:47:01,426 Preparing metadata (setup.py): finished with status 'done' 2025-06-10T18:47:01,431 Source in /tmp/pip-wheel-r6l9yeoa/dendropy_ee320927c6304b3f900c28e99217e403 has version 5.0.8, which satisfies requirement dendropy==5.0.8 from https://files.pythonhosted.org/packages/76/e4/ea83865a284c81e58d55936578dbfaa012afd7a791a75e1105c46e928f1d/DendroPy-5.0.8.tar.gz 2025-06-10T18:47:01,432 Removed dendropy==5.0.8 from https://files.pythonhosted.org/packages/76/e4/ea83865a284c81e58d55936578dbfaa012afd7a791a75e1105c46e928f1d/DendroPy-5.0.8.tar.gz from build tracker '/tmp/pip-build-tracker-vtiwqyt7' 2025-06-10T18:47:01,439 Created temporary directory: /tmp/pip-unpack-t1jm7dne 2025-06-10T18:47:01,440 Created temporary directory: /tmp/pip-unpack-d7erb3iw 2025-06-10T18:47:01,441 Building wheels for collected packages: dendropy 2025-06-10T18:47:01,445 Created temporary directory: /tmp/pip-wheel-ny8kkie0 2025-06-10T18:47:01,446 DEPRECATION: Building 'dendropy' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'dendropy'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-06-10T18:47:01,448 Building wheel for dendropy (setup.py): started 2025-06-10T18:47:01,449 Destination directory: /tmp/pip-wheel-ny8kkie0 2025-06-10T18:47:01,449 Running command python setup.py bdist_wheel 2025-06-10T18:47:02,012 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-06-10T18:47:02,012 !! 2025-06-10T18:47:02,014 ******************************************************************************** 2025-06-10T18:47:02,014 Requirements should be satisfied by a PEP 517 installer. 2025-06-10T18:47:02,015 If you are using pip, you can try `pip install --use-pep517`. 2025-06-10T18:47:02,016 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-10T18:47:02,017 or your builds will no longer be supported. 2025-06-10T18:47:02,018 ******************************************************************************** 2025-06-10T18:47:02,019 !! 2025-06-10T18:47:02,019 dist.fetch_build_eggs(dist.setup_requires) 2025-06-10T18:47:02,234 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-06-10T18:47:02,235 warnings.warn(msg) 2025-06-10T18:47:02,236 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' 2025-06-10T18:47:02,236 warnings.warn(msg) 2025-06-10T18:47:02,524 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-06-10T18:47:02,524 !! 2025-06-10T18:47:02,526 ******************************************************************************** 2025-06-10T18:47:02,526 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-06-10T18:47:02,527 License :: OSI Approved :: BSD License 2025-06-10T18:47:02,528 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-06-10T18:47:02,529 ******************************************************************************** 2025-06-10T18:47:02,530 !! 2025-06-10T18:47:02,530 self._finalize_license_expression() 2025-06-10T18:47:02,531 running bdist_wheel 2025-06-10T18:47:02,677 running build 2025-06-10T18:47:02,677 running build_py 2025-06-10T18:47:02,710 creating build/lib/dendropy 2025-06-10T18:47:02,713 copying src/dendropy/__init__.py -> build/lib/dendropy 2025-06-10T18:47:02,716 copying src/dendropy/__main__.py -> build/lib/dendropy 2025-06-10T18:47:02,719 creating build/lib/dendropy/interop 2025-06-10T18:47:02,720 copying src/dendropy/interop/ape.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,722 copying src/dendropy/interop/ete.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,725 copying src/dendropy/interop/itol.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,728 copying src/dendropy/interop/rspr.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,730 copying src/dendropy/interop/__init__.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,732 copying src/dendropy/interop/raxml.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,735 copying src/dendropy/interop/genbank.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,739 copying src/dendropy/interop/muscle.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,741 copying src/dendropy/interop/gbif.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,744 copying src/dendropy/interop/biopython.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,746 copying src/dendropy/interop/paup.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,750 copying src/dendropy/interop/entrez.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,752 copying src/dendropy/interop/seqgen.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,755 copying src/dendropy/interop/rstats.py -> build/lib/dendropy/interop 2025-06-10T18:47:02,758 creating build/lib/dendropy/application 2025-06-10T18:47:02,759 copying src/dendropy/application/dendropy_format.py -> build/lib/dendropy/application 2025-06-10T18:47:02,762 copying src/dendropy/application/sumtrees.py -> build/lib/dendropy/application 2025-06-10T18:47:02,767 copying src/dendropy/application/__init__.py -> build/lib/dendropy/application 2025-06-10T18:47:02,768 copying src/dendropy/application/sumlabels.py -> build/lib/dendropy/application 2025-06-10T18:47:02,772 creating build/lib/dendropy/model 2025-06-10T18:47:02,773 copying src/dendropy/model/__init__.py -> build/lib/dendropy/model 2025-06-10T18:47:02,775 copying src/dendropy/model/coalescent.py -> build/lib/dendropy/model 2025-06-10T18:47:02,778 copying src/dendropy/model/protractedspeciation.py -> build/lib/dendropy/model 2025-06-10T18:47:02,782 copying src/dendropy/model/reconcile.py -> build/lib/dendropy/model 2025-06-10T18:47:02,785 copying src/dendropy/model/parsimony.py -> build/lib/dendropy/model 2025-06-10T18:47:02,788 copying src/dendropy/model/continuous.py -> build/lib/dendropy/model 2025-06-10T18:47:02,791 copying src/dendropy/model/treeshape.py -> build/lib/dendropy/model 2025-06-10T18:47:02,794 copying src/dendropy/model/discrete.py -> build/lib/dendropy/model 2025-06-10T18:47:02,796 copying src/dendropy/model/birthdeath.py -> build/lib/dendropy/model 2025-06-10T18:47:02,801 copying src/dendropy/model/multispeciescoalescent.py -> build/lib/dendropy/model 2025-06-10T18:47:02,804 creating build/lib/dendropy/dataio 2025-06-10T18:47:02,805 copying src/dendropy/dataio/newickwriter.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,808 copying src/dendropy/dataio/nexuswriter.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,811 copying src/dendropy/dataio/xmlprocessing.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,813 copying src/dendropy/dataio/multiphylipreader.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,815 copying src/dendropy/dataio/__init__.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,818 copying src/dendropy/dataio/nexusyielder.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,820 copying src/dendropy/dataio/nexmlwriter.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,823 copying src/dendropy/dataio/phylipwriter.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,825 copying src/dendropy/dataio/newickyielder.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,827 copying src/dendropy/dataio/tokenizer.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,830 copying src/dendropy/dataio/newick.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,832 copying src/dendropy/dataio/nexmlreader.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,835 copying src/dendropy/dataio/phylipreader.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,838 copying src/dendropy/dataio/nexmlyielder.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,840 copying src/dendropy/dataio/fastareader.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,842 copying src/dendropy/dataio/nexusreader.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,847 copying src/dendropy/dataio/nexusprocessing.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,849 copying src/dendropy/dataio/newickreader.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,853 copying src/dendropy/dataio/ioservice.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,855 copying src/dendropy/dataio/fastawriter.py -> build/lib/dendropy/dataio 2025-06-10T18:47:02,858 creating build/lib/dendropy/legacy 2025-06-10T18:47:02,859 copying src/dendropy/legacy/treesum.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,861 copying src/dendropy/legacy/ncbi.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,864 copying src/dendropy/legacy/popgenstat.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,867 copying src/dendropy/legacy/treesplit.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,869 copying src/dendropy/legacy/__init__.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,871 copying src/dendropy/legacy/seqsim.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,873 copying src/dendropy/legacy/coalescent.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,876 copying src/dendropy/legacy/treesim.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,878 copying src/dendropy/legacy/treemanip.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,880 copying src/dendropy/legacy/popgensim.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,882 copying src/dendropy/legacy/reconcile.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,884 copying src/dendropy/legacy/seqmodel.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,886 copying src/dendropy/legacy/continuous.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,888 copying src/dendropy/legacy/treecalc.py -> build/lib/dendropy/legacy 2025-06-10T18:47:02,891 creating build/lib/dendropy/mathlib 2025-06-10T18:47:02,892 copying src/dendropy/mathlib/__init__.py -> build/lib/dendropy/mathlib 2025-06-10T18:47:02,894 copying src/dendropy/mathlib/probability.py -> build/lib/dendropy/mathlib 2025-06-10T18:47:02,897 copying src/dendropy/mathlib/statistics.py -> build/lib/dendropy/mathlib 2025-06-10T18:47:02,899 copying src/dendropy/mathlib/mathfn.py -> build/lib/dendropy/mathlib 2025-06-10T18:47:02,901 creating build/lib/dendropy/utility 2025-06-10T18:47:02,903 copying src/dendropy/utility/timeprocessing.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,905 copying src/dendropy/utility/messaging.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,907 copying src/dendropy/utility/container.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,911 copying src/dendropy/utility/bibtex.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,913 copying src/dendropy/utility/__init__.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,915 copying src/dendropy/utility/metavar.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,917 copying src/dendropy/utility/cli.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,920 copying src/dendropy/utility/deprecate.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,922 copying src/dendropy/utility/vcsinfo.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,924 copying src/dendropy/utility/debug.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,926 copying src/dendropy/utility/filesys.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,929 copying src/dendropy/utility/textprocessing.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,931 copying src/dendropy/utility/processio.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,934 copying src/dendropy/utility/bitprocessing.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,936 copying src/dendropy/utility/terminal.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,938 copying src/dendropy/utility/error.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,940 copying src/dendropy/utility/constants.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,942 copying src/dendropy/utility/urlio.py -> build/lib/dendropy/utility 2025-06-10T18:47:02,944 creating build/lib/dendropy/datamodel 2025-06-10T18:47:02,945 copying src/dendropy/datamodel/__init__.py -> build/lib/dendropy/datamodel 2025-06-10T18:47:02,948 copying src/dendropy/datamodel/basemodel.py -> build/lib/dendropy/datamodel 2025-06-10T18:47:02,951 copying src/dendropy/datamodel/treecollectionmodel.py -> build/lib/dendropy/datamodel 2025-06-10T18:47:02,957 copying src/dendropy/datamodel/charstatemodel.py -> build/lib/dendropy/datamodel 2025-06-10T18:47:02,960 copying src/dendropy/datamodel/taxonmodel.py -> build/lib/dendropy/datamodel 2025-06-10T18:47:02,964 copying src/dendropy/datamodel/charmatrixmodel.py -> build/lib/dendropy/datamodel 2025-06-10T18:47:02,969 copying src/dendropy/datamodel/datasetmodel.py -> build/lib/dendropy/datamodel 2025-06-10T18:47:02,972 creating build/lib/dendropy/simulate 2025-06-10T18:47:02,973 copying src/dendropy/simulate/__init__.py -> build/lib/dendropy/simulate 2025-06-10T18:47:02,975 copying src/dendropy/simulate/charsim.py -> build/lib/dendropy/simulate 2025-06-10T18:47:02,977 copying src/dendropy/simulate/treesim.py -> build/lib/dendropy/simulate 2025-06-10T18:47:02,980 copying src/dendropy/simulate/popgensim.py -> build/lib/dendropy/simulate 2025-06-10T18:47:02,983 creating build/lib/dendropy/calculate 2025-06-10T18:47:02,984 copying src/dendropy/calculate/treesum.py -> build/lib/dendropy/calculate 2025-06-10T18:47:02,987 copying src/dendropy/calculate/popgenstat.py -> build/lib/dendropy/calculate 2025-06-10T18:47:02,989 copying src/dendropy/calculate/__init__.py -> build/lib/dendropy/calculate 2025-06-10T18:47:02,991 copying src/dendropy/calculate/profiledistance.py -> build/lib/dendropy/calculate 2025-06-10T18:47:02,994 copying src/dendropy/calculate/combinatorics.py -> build/lib/dendropy/calculate 2025-06-10T18:47:02,996 copying src/dendropy/calculate/probability.py -> build/lib/dendropy/calculate 2025-06-10T18:47:02,999 copying src/dendropy/calculate/treescore.py -> build/lib/dendropy/calculate 2025-06-10T18:47:03,001 copying src/dendropy/calculate/treemeasure.py -> build/lib/dendropy/calculate 2025-06-10T18:47:03,003 copying src/dendropy/calculate/treecompare.py -> build/lib/dendropy/calculate 2025-06-10T18:47:03,006 copying src/dendropy/calculate/statistics.py -> build/lib/dendropy/calculate 2025-06-10T18:47:03,009 copying src/dendropy/calculate/mathfn.py -> build/lib/dendropy/calculate 2025-06-10T18:47:03,011 copying src/dendropy/calculate/phylogeneticdistance.py -> build/lib/dendropy/calculate 2025-06-10T18:47:03,016 creating build/lib/dendropy/plot 2025-06-10T18:47:03,017 copying src/dendropy/plot/tikzplot.py -> build/lib/dendropy/plot 2025-06-10T18:47:03,020 copying src/dendropy/plot/__init__.py -> build/lib/dendropy/plot 2025-06-10T18:47:03,021 copying src/dendropy/plot/asciiplot.py -> build/lib/dendropy/plot 2025-06-10T18:47:03,025 creating build/lib/dendropy/utility/libexec 2025-06-10T18:47:03,026 copying src/dendropy/utility/libexec/__init__.py -> build/lib/dendropy/utility/libexec 2025-06-10T18:47:03,029 creating build/lib/dendropy/datamodel/treemodel 2025-06-10T18:47:03,030 copying src/dendropy/datamodel/treemodel/_bipartition.py -> build/lib/dendropy/datamodel/treemodel 2025-06-10T18:47:03,033 copying src/dendropy/datamodel/treemodel/__init__.py -> build/lib/dendropy/datamodel/treemodel 2025-06-10T18:47:03,035 copying src/dendropy/datamodel/treemodel/_node.py -> build/lib/dendropy/datamodel/treemodel 2025-06-10T18:47:03,039 copying src/dendropy/datamodel/treemodel/_tree.py -> build/lib/dendropy/datamodel/treemodel 2025-06-10T18:47:03,046 copying src/dendropy/datamodel/treemodel/_edge.py -> build/lib/dendropy/datamodel/treemodel 2025-06-10T18:47:03,048 running egg_info 2025-06-10T18:47:03,080 writing src/DendroPy.egg-info/PKG-INFO 2025-06-10T18:47:03,083 writing dependency_links to src/DendroPy.egg-info/dependency_links.txt 2025-06-10T18:47:03,085 writing entry points to src/DendroPy.egg-info/entry_points.txt 2025-06-10T18:47:03,087 writing requirements to src/DendroPy.egg-info/requires.txt 2025-06-10T18:47:03,088 writing top-level names to src/DendroPy.egg-info/top_level.txt 2025-06-10T18:47:03,149 reading manifest file 'src/DendroPy.egg-info/SOURCES.txt' 2025-06-10T18:47:03,158 reading manifest template 'MANIFEST.in' 2025-06-10T18:47:03,159 warning: no files found matching 'README.rst' 2025-06-10T18:47:03,160 warning: no files found matching 'doc/Makefile' 2025-06-10T18:47:03,160 warning: no files found matching '*' under directory 'doc/source' 2025-06-10T18:47:03,161 warning: no files found matching '*' under directory 'tests/data' 2025-06-10T18:47:03,162 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2025-06-10T18:47:03,163 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2025-06-10T18:47:03,164 warning: no previously-included files matching '.gitignore' found anywhere in distribution 2025-06-10T18:47:03,166 warning: no previously-included files matching '.gitattributes' found anywhere in distribution 2025-06-10T18:47:03,167 warning: no previously-included files matching '.idea' found anywhere in distribution 2025-06-10T18:47:03,168 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2025-06-10T18:47:03,169 adding license file 'LICENSE.rst' 2025-06-10T18:47:03,169 adding license file 'NOTICES.rst' 2025-06-10T18:47:03,170 adding license file 'AUTHORS.rst' 2025-06-10T18:47:03,177 writing manifest file 'src/DendroPy.egg-info/SOURCES.txt' 2025-06-10T18:47:03,236 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-06-10T18:47:03,237 !! 2025-06-10T18:47:03,238 ******************************************************************************** 2025-06-10T18:47:03,239 Please avoid running ``setup.py`` directly. 2025-06-10T18:47:03,239 Instead, use pypa/build, pypa/installer or other 2025-06-10T18:47:03,240 standards-based tools. 2025-06-10T18:47:03,242 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-10T18:47:03,242 or your builds will no longer be supported. 2025-06-10T18:47:03,244 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-06-10T18:47:03,244 ******************************************************************************** 2025-06-10T18:47:03,245 !! 2025-06-10T18:47:03,245 self.initialize_options() 2025-06-10T18:47:03,268 installing to build/bdist.linux-armv7l/wheel 2025-06-10T18:47:03,269 running install 2025-06-10T18:47:03,293 running install_lib 2025-06-10T18:47:03,323 creating build/bdist.linux-armv7l/wheel 2025-06-10T18:47:03,325 creating build/bdist.linux-armv7l/wheel/dendropy 2025-06-10T18:47:03,327 creating build/bdist.linux-armv7l/wheel/dendropy/interop 2025-06-10T18:47:03,328 copying build/lib/dendropy/interop/ape.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,331 copying build/lib/dendropy/interop/ete.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,333 copying build/lib/dendropy/interop/itol.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,336 copying build/lib/dendropy/interop/rspr.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,338 copying build/lib/dendropy/interop/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,340 copying build/lib/dendropy/interop/raxml.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,343 copying build/lib/dendropy/interop/genbank.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,347 copying build/lib/dendropy/interop/muscle.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,349 copying build/lib/dendropy/interop/gbif.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,351 copying build/lib/dendropy/interop/biopython.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,353 copying build/lib/dendropy/interop/paup.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,356 copying build/lib/dendropy/interop/entrez.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,358 copying build/lib/dendropy/interop/seqgen.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,361 copying build/lib/dendropy/interop/rstats.py -> build/bdist.linux-armv7l/wheel/./dendropy/interop 2025-06-10T18:47:03,363 copying build/lib/dendropy/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy 2025-06-10T18:47:03,366 creating build/bdist.linux-armv7l/wheel/dendropy/application 2025-06-10T18:47:03,367 copying build/lib/dendropy/application/dendropy_format.py -> build/bdist.linux-armv7l/wheel/./dendropy/application 2025-06-10T18:47:03,370 copying build/lib/dendropy/application/sumtrees.py -> build/bdist.linux-armv7l/wheel/./dendropy/application 2025-06-10T18:47:03,374 copying build/lib/dendropy/application/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/application 2025-06-10T18:47:03,376 copying build/lib/dendropy/application/sumlabels.py -> build/bdist.linux-armv7l/wheel/./dendropy/application 2025-06-10T18:47:03,379 creating build/bdist.linux-armv7l/wheel/dendropy/model 2025-06-10T18:47:03,380 copying build/lib/dendropy/model/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/model 2025-06-10T18:47:03,382 copying build/lib/dendropy/model/coalescent.py -> build/bdist.linux-armv7l/wheel/./dendropy/model 2025-06-10T18:47:03,385 copying build/lib/dendropy/model/protractedspeciation.py -> build/bdist.linux-armv7l/wheel/./dendropy/model 2025-06-10T18:47:03,389 copying build/lib/dendropy/model/reconcile.py -> build/bdist.linux-armv7l/wheel/./dendropy/model 2025-06-10T18:47:03,392 copying build/lib/dendropy/model/parsimony.py -> build/bdist.linux-armv7l/wheel/./dendropy/model 2025-06-10T18:47:03,394 copying build/lib/dendropy/model/continuous.py -> build/bdist.linux-armv7l/wheel/./dendropy/model 2025-06-10T18:47:03,397 copying build/lib/dendropy/model/treeshape.py -> build/bdist.linux-armv7l/wheel/./dendropy/model 2025-06-10T18:47:03,399 copying build/lib/dendropy/model/discrete.py -> build/bdist.linux-armv7l/wheel/./dendropy/model 2025-06-10T18:47:03,402 copying build/lib/dendropy/model/birthdeath.py -> build/bdist.linux-armv7l/wheel/./dendropy/model 2025-06-10T18:47:03,407 copying build/lib/dendropy/model/multispeciescoalescent.py -> build/bdist.linux-armv7l/wheel/./dendropy/model 2025-06-10T18:47:03,409 copying build/lib/dendropy/__main__.py -> build/bdist.linux-armv7l/wheel/./dendropy 2025-06-10T18:47:03,412 creating build/bdist.linux-armv7l/wheel/dendropy/dataio 2025-06-10T18:47:03,413 copying build/lib/dendropy/dataio/newickwriter.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,416 copying build/lib/dendropy/dataio/nexuswriter.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,419 copying build/lib/dendropy/dataio/xmlprocessing.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,421 copying build/lib/dendropy/dataio/multiphylipreader.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,423 copying build/lib/dendropy/dataio/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,425 copying build/lib/dendropy/dataio/nexusyielder.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,427 copying build/lib/dendropy/dataio/nexmlwriter.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,430 copying build/lib/dendropy/dataio/phylipwriter.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,432 copying build/lib/dendropy/dataio/newickyielder.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,434 copying build/lib/dendropy/dataio/tokenizer.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,437 copying build/lib/dendropy/dataio/newick.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,439 copying build/lib/dendropy/dataio/nexmlreader.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,443 copying build/lib/dendropy/dataio/phylipreader.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,445 copying build/lib/dendropy/dataio/nexmlyielder.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,447 copying build/lib/dendropy/dataio/fastareader.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,449 copying build/lib/dendropy/dataio/nexusreader.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,453 copying build/lib/dendropy/dataio/nexusprocessing.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,456 copying build/lib/dendropy/dataio/newickreader.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,459 copying build/lib/dendropy/dataio/ioservice.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,462 copying build/lib/dendropy/dataio/fastawriter.py -> build/bdist.linux-armv7l/wheel/./dendropy/dataio 2025-06-10T18:47:03,465 creating build/bdist.linux-armv7l/wheel/dendropy/legacy 2025-06-10T18:47:03,466 copying build/lib/dendropy/legacy/treesum.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,468 copying build/lib/dendropy/legacy/ncbi.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,470 copying build/lib/dendropy/legacy/popgenstat.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,473 copying build/lib/dendropy/legacy/treesplit.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,475 copying build/lib/dendropy/legacy/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,477 copying build/lib/dendropy/legacy/seqsim.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,479 copying build/lib/dendropy/legacy/coalescent.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,482 copying build/lib/dendropy/legacy/treesim.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,484 copying build/lib/dendropy/legacy/treemanip.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,486 copying build/lib/dendropy/legacy/popgensim.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,488 copying build/lib/dendropy/legacy/reconcile.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,489 copying build/lib/dendropy/legacy/seqmodel.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,491 copying build/lib/dendropy/legacy/continuous.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,493 copying build/lib/dendropy/legacy/treecalc.py -> build/bdist.linux-armv7l/wheel/./dendropy/legacy 2025-06-10T18:47:03,496 creating build/bdist.linux-armv7l/wheel/dendropy/mathlib 2025-06-10T18:47:03,497 copying build/lib/dendropy/mathlib/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/mathlib 2025-06-10T18:47:03,499 copying build/lib/dendropy/mathlib/probability.py -> build/bdist.linux-armv7l/wheel/./dendropy/mathlib 2025-06-10T18:47:03,501 copying build/lib/dendropy/mathlib/statistics.py -> build/bdist.linux-armv7l/wheel/./dendropy/mathlib 2025-06-10T18:47:03,503 copying build/lib/dendropy/mathlib/mathfn.py -> build/bdist.linux-armv7l/wheel/./dendropy/mathlib 2025-06-10T18:47:03,505 creating build/bdist.linux-armv7l/wheel/dendropy/utility 2025-06-10T18:47:03,506 copying build/lib/dendropy/utility/timeprocessing.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,508 copying build/lib/dendropy/utility/messaging.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,511 copying build/lib/dendropy/utility/container.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,514 creating build/bdist.linux-armv7l/wheel/dendropy/utility/libexec 2025-06-10T18:47:03,515 copying build/lib/dendropy/utility/libexec/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility/libexec 2025-06-10T18:47:03,518 copying build/lib/dendropy/utility/bibtex.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,520 copying build/lib/dendropy/utility/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,522 copying build/lib/dendropy/utility/metavar.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,524 copying build/lib/dendropy/utility/cli.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,526 copying build/lib/dendropy/utility/deprecate.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,528 copying build/lib/dendropy/utility/vcsinfo.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,530 copying build/lib/dendropy/utility/debug.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,532 copying build/lib/dendropy/utility/filesys.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,535 copying build/lib/dendropy/utility/textprocessing.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,537 copying build/lib/dendropy/utility/processio.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,539 copying build/lib/dendropy/utility/bitprocessing.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,541 copying build/lib/dendropy/utility/terminal.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,543 copying build/lib/dendropy/utility/error.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,545 copying build/lib/dendropy/utility/constants.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,547 copying build/lib/dendropy/utility/urlio.py -> build/bdist.linux-armv7l/wheel/./dendropy/utility 2025-06-10T18:47:03,550 creating build/bdist.linux-armv7l/wheel/dendropy/datamodel 2025-06-10T18:47:03,551 creating build/bdist.linux-armv7l/wheel/dendropy/datamodel/treemodel 2025-06-10T18:47:03,552 copying build/lib/dendropy/datamodel/treemodel/_bipartition.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel/treemodel 2025-06-10T18:47:03,555 copying build/lib/dendropy/datamodel/treemodel/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel/treemodel 2025-06-10T18:47:03,557 copying build/lib/dendropy/datamodel/treemodel/_node.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel/treemodel 2025-06-10T18:47:03,561 copying build/lib/dendropy/datamodel/treemodel/_tree.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel/treemodel 2025-06-10T18:47:03,567 copying build/lib/dendropy/datamodel/treemodel/_edge.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel/treemodel 2025-06-10T18:47:03,570 copying build/lib/dendropy/datamodel/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel 2025-06-10T18:47:03,572 copying build/lib/dendropy/datamodel/basemodel.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel 2025-06-10T18:47:03,575 copying build/lib/dendropy/datamodel/treecollectionmodel.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel 2025-06-10T18:47:03,580 copying build/lib/dendropy/datamodel/charstatemodel.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel 2025-06-10T18:47:03,584 copying build/lib/dendropy/datamodel/taxonmodel.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel 2025-06-10T18:47:03,588 copying build/lib/dendropy/datamodel/charmatrixmodel.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel 2025-06-10T18:47:03,592 copying build/lib/dendropy/datamodel/datasetmodel.py -> build/bdist.linux-armv7l/wheel/./dendropy/datamodel 2025-06-10T18:47:03,596 creating build/bdist.linux-armv7l/wheel/dendropy/simulate 2025-06-10T18:47:03,597 copying build/lib/dendropy/simulate/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/simulate 2025-06-10T18:47:03,599 copying build/lib/dendropy/simulate/charsim.py -> build/bdist.linux-armv7l/wheel/./dendropy/simulate 2025-06-10T18:47:03,601 copying build/lib/dendropy/simulate/treesim.py -> build/bdist.linux-armv7l/wheel/./dendropy/simulate 2025-06-10T18:47:03,603 copying build/lib/dendropy/simulate/popgensim.py -> build/bdist.linux-armv7l/wheel/./dendropy/simulate 2025-06-10T18:47:03,606 creating build/bdist.linux-armv7l/wheel/dendropy/calculate 2025-06-10T18:47:03,607 copying build/lib/dendropy/calculate/treesum.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,610 copying build/lib/dendropy/calculate/popgenstat.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,612 copying build/lib/dendropy/calculate/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,614 copying build/lib/dendropy/calculate/profiledistance.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,617 copying build/lib/dendropy/calculate/combinatorics.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,619 copying build/lib/dendropy/calculate/probability.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,621 copying build/lib/dendropy/calculate/treescore.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,623 copying build/lib/dendropy/calculate/treemeasure.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,626 copying build/lib/dendropy/calculate/treecompare.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,629 copying build/lib/dendropy/calculate/statistics.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,632 copying build/lib/dendropy/calculate/mathfn.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,634 copying build/lib/dendropy/calculate/phylogeneticdistance.py -> build/bdist.linux-armv7l/wheel/./dendropy/calculate 2025-06-10T18:47:03,638 creating build/bdist.linux-armv7l/wheel/dendropy/plot 2025-06-10T18:47:03,639 copying build/lib/dendropy/plot/tikzplot.py -> build/bdist.linux-armv7l/wheel/./dendropy/plot 2025-06-10T18:47:03,642 copying build/lib/dendropy/plot/__init__.py -> build/bdist.linux-armv7l/wheel/./dendropy/plot 2025-06-10T18:47:03,644 copying build/lib/dendropy/plot/asciiplot.py -> build/bdist.linux-armv7l/wheel/./dendropy/plot 2025-06-10T18:47:03,646 running install_egg_info 2025-06-10T18:47:03,678 Copying src/DendroPy.egg-info to build/bdist.linux-armv7l/wheel/./DendroPy-5.0.8-py3.11.egg-info 2025-06-10T18:47:03,692 running install_scripts 2025-06-10T18:47:03,711 creating build/bdist.linux-armv7l/wheel/dendropy-5.0.8.dist-info/WHEEL 2025-06-10T18:47:03,713 creating '/tmp/pip-wheel-ny8kkie0/dendropy-5.0.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-06-10T18:47:03,717 adding 'dendropy/__init__.py' 2025-06-10T18:47:03,718 adding 'dendropy/__main__.py' 2025-06-10T18:47:03,720 adding 'dendropy/application/__init__.py' 2025-06-10T18:47:03,721 adding 'dendropy/application/dendropy_format.py' 2025-06-10T18:47:03,723 adding 'dendropy/application/sumlabels.py' 2025-06-10T18:47:03,734 adding 'dendropy/application/sumtrees.py' 2025-06-10T18:47:03,737 adding 'dendropy/calculate/__init__.py' 2025-06-10T18:47:03,738 adding 'dendropy/calculate/combinatorics.py' 2025-06-10T18:47:03,740 adding 'dendropy/calculate/mathfn.py' 2025-06-10T18:47:03,746 adding 'dendropy/calculate/phylogeneticdistance.py' 2025-06-10T18:47:03,749 adding 'dendropy/calculate/popgenstat.py' 2025-06-10T18:47:03,751 adding 'dendropy/calculate/probability.py' 2025-06-10T18:47:03,753 adding 'dendropy/calculate/profiledistance.py' 2025-06-10T18:47:03,756 adding 'dendropy/calculate/statistics.py' 2025-06-10T18:47:03,760 adding 'dendropy/calculate/treecompare.py' 2025-06-10T18:47:03,762 adding 'dendropy/calculate/treemeasure.py' 2025-06-10T18:47:03,764 adding 'dendropy/calculate/treescore.py' 2025-06-10T18:47:03,766 adding 'dendropy/calculate/treesum.py' 2025-06-10T18:47:03,768 adding 'dendropy/dataio/__init__.py' 2025-06-10T18:47:03,770 adding 'dendropy/dataio/fastareader.py' 2025-06-10T18:47:03,771 adding 'dendropy/dataio/fastawriter.py' 2025-06-10T18:47:03,774 adding 'dendropy/dataio/ioservice.py' 2025-06-10T18:47:03,775 adding 'dendropy/dataio/multiphylipreader.py' 2025-06-10T18:47:03,777 adding 'dendropy/dataio/newick.py' 2025-06-10T18:47:03,781 adding 'dendropy/dataio/newickreader.py' 2025-06-10T18:47:03,783 adding 'dendropy/dataio/newickwriter.py' 2025-06-10T18:47:03,785 adding 'dendropy/dataio/newickyielder.py' 2025-06-10T18:47:03,790 adding 'dendropy/dataio/nexmlreader.py' 2025-06-10T18:47:03,793 adding 'dendropy/dataio/nexmlwriter.py' 2025-06-10T18:47:03,795 adding 'dendropy/dataio/nexmlyielder.py' 2025-06-10T18:47:03,798 adding 'dendropy/dataio/nexusprocessing.py' 2025-06-10T18:47:03,805 adding 'dendropy/dataio/nexusreader.py' 2025-06-10T18:47:03,808 adding 'dendropy/dataio/nexuswriter.py' 2025-06-10T18:47:03,810 adding 'dendropy/dataio/nexusyielder.py' 2025-06-10T18:47:03,813 adding 'dendropy/dataio/phylipreader.py' 2025-06-10T18:47:03,814 adding 'dendropy/dataio/phylipwriter.py' 2025-06-10T18:47:03,816 adding 'dendropy/dataio/tokenizer.py' 2025-06-10T18:47:03,818 adding 'dendropy/dataio/xmlprocessing.py' 2025-06-10T18:47:03,820 adding 'dendropy/datamodel/__init__.py' 2025-06-10T18:47:03,826 adding 'dendropy/datamodel/basemodel.py' 2025-06-10T18:47:03,836 adding 'dendropy/datamodel/charmatrixmodel.py' 2025-06-10T18:47:03,842 adding 'dendropy/datamodel/charstatemodel.py' 2025-06-10T18:47:03,845 adding 'dendropy/datamodel/datasetmodel.py' 2025-06-10T18:47:03,854 adding 'dendropy/datamodel/taxonmodel.py' 2025-06-10T18:47:03,868 adding 'dendropy/datamodel/treecollectionmodel.py' 2025-06-10T18:47:03,870 adding 'dendropy/datamodel/treemodel/__init__.py' 2025-06-10T18:47:03,874 adding 'dendropy/datamodel/treemodel/_bipartition.py' 2025-06-10T18:47:03,876 adding 'dendropy/datamodel/treemodel/_edge.py' 2025-06-10T18:47:03,883 adding 'dendropy/datamodel/treemodel/_node.py' 2025-06-10T18:47:03,901 adding 'dendropy/datamodel/treemodel/_tree.py' 2025-06-10T18:47:03,904 adding 'dendropy/interop/__init__.py' 2025-06-10T18:47:03,907 adding 'dendropy/interop/ape.py' 2025-06-10T18:47:03,908 adding 'dendropy/interop/biopython.py' 2025-06-10T18:47:03,909 adding 'dendropy/interop/entrez.py' 2025-06-10T18:47:03,910 adding 'dendropy/interop/ete.py' 2025-06-10T18:47:03,913 adding 'dendropy/interop/gbif.py' 2025-06-10T18:47:03,917 adding 'dendropy/interop/genbank.py' 2025-06-10T18:47:03,919 adding 'dendropy/interop/itol.py' 2025-06-10T18:47:03,920 adding 'dendropy/interop/muscle.py' 2025-06-10T18:47:03,925 adding 'dendropy/interop/paup.py' 2025-06-10T18:47:03,929 adding 'dendropy/interop/raxml.py' 2025-06-10T18:47:03,931 adding 'dendropy/interop/rspr.py' 2025-06-10T18:47:03,933 adding 'dendropy/interop/rstats.py' 2025-06-10T18:47:03,934 adding 'dendropy/interop/seqgen.py' 2025-06-10T18:47:03,936 adding 'dendropy/legacy/__init__.py' 2025-06-10T18:47:03,938 adding 'dendropy/legacy/coalescent.py' 2025-06-10T18:47:03,939 adding 'dendropy/legacy/continuous.py' 2025-06-10T18:47:03,941 adding 'dendropy/legacy/ncbi.py' 2025-06-10T18:47:03,942 adding 'dendropy/legacy/popgensim.py' 2025-06-10T18:47:03,944 adding 'dendropy/legacy/popgenstat.py' 2025-06-10T18:47:03,945 adding 'dendropy/legacy/reconcile.py' 2025-06-10T18:47:03,946 adding 'dendropy/legacy/seqmodel.py' 2025-06-10T18:47:03,948 adding 'dendropy/legacy/seqsim.py' 2025-06-10T18:47:03,949 adding 'dendropy/legacy/treecalc.py' 2025-06-10T18:47:03,950 adding 'dendropy/legacy/treemanip.py' 2025-06-10T18:47:03,952 adding 'dendropy/legacy/treesim.py' 2025-06-10T18:47:03,953 adding 'dendropy/legacy/treesplit.py' 2025-06-10T18:47:03,955 adding 'dendropy/legacy/treesum.py' 2025-06-10T18:47:03,956 adding 'dendropy/mathlib/__init__.py' 2025-06-10T18:47:03,958 adding 'dendropy/mathlib/mathfn.py' 2025-06-10T18:47:03,959 adding 'dendropy/mathlib/probability.py' 2025-06-10T18:47:03,960 adding 'dendropy/mathlib/statistics.py' 2025-06-10T18:47:03,962 adding 'dendropy/model/__init__.py' 2025-06-10T18:47:03,970 adding 'dendropy/model/birthdeath.py' 2025-06-10T18:47:03,975 adding 'dendropy/model/coalescent.py' 2025-06-10T18:47:03,978 adding 'dendropy/model/continuous.py' 2025-06-10T18:47:03,980 adding 'dendropy/model/discrete.py' 2025-06-10T18:47:03,983 adding 'dendropy/model/multispeciescoalescent.py' 2025-06-10T18:47:03,985 adding 'dendropy/model/parsimony.py' 2025-06-10T18:47:03,990 adding 'dendropy/model/protractedspeciation.py' 2025-06-10T18:47:03,993 adding 'dendropy/model/reconcile.py' 2025-06-10T18:47:03,995 adding 'dendropy/model/treeshape.py' 2025-06-10T18:47:03,996 adding 'dendropy/plot/__init__.py' 2025-06-10T18:47:03,998 adding 'dendropy/plot/asciiplot.py' 2025-06-10T18:47:04,000 adding 'dendropy/plot/tikzplot.py' 2025-06-10T18:47:04,002 adding 'dendropy/simulate/__init__.py' 2025-06-10T18:47:04,003 adding 'dendropy/simulate/charsim.py' 2025-06-10T18:47:04,005 adding 'dendropy/simulate/popgensim.py' 2025-06-10T18:47:04,007 adding 'dendropy/simulate/treesim.py' 2025-06-10T18:47:04,009 adding 'dendropy/utility/__init__.py' 2025-06-10T18:47:04,011 adding 'dendropy/utility/bibtex.py' 2025-06-10T18:47:04,012 adding 'dendropy/utility/bitprocessing.py' 2025-06-10T18:47:04,014 adding 'dendropy/utility/cli.py' 2025-06-10T18:47:04,015 adding 'dendropy/utility/constants.py' 2025-06-10T18:47:04,021 adding 'dendropy/utility/container.py' 2025-06-10T18:47:04,022 adding 'dendropy/utility/debug.py' 2025-06-10T18:47:04,023 adding 'dendropy/utility/deprecate.py' 2025-06-10T18:47:04,025 adding 'dendropy/utility/error.py' 2025-06-10T18:47:04,027 adding 'dendropy/utility/filesys.py' 2025-06-10T18:47:04,029 adding 'dendropy/utility/messaging.py' 2025-06-10T18:47:04,030 adding 'dendropy/utility/metavar.py' 2025-06-10T18:47:04,031 adding 'dendropy/utility/processio.py' 2025-06-10T18:47:04,033 adding 'dendropy/utility/terminal.py' 2025-06-10T18:47:04,034 adding 'dendropy/utility/textprocessing.py' 2025-06-10T18:47:04,036 adding 'dendropy/utility/timeprocessing.py' 2025-06-10T18:47:04,037 adding 'dendropy/utility/urlio.py' 2025-06-10T18:47:04,038 adding 'dendropy/utility/vcsinfo.py' 2025-06-10T18:47:04,040 adding 'dendropy/utility/libexec/__init__.py' 2025-06-10T18:47:04,042 adding 'dendropy-5.0.8.dist-info/licenses/AUTHORS.rst' 2025-06-10T18:47:04,044 adding 'dendropy-5.0.8.dist-info/licenses/LICENSE.rst' 2025-06-10T18:47:04,045 adding 'dendropy-5.0.8.dist-info/licenses/NOTICES.rst' 2025-06-10T18:47:04,046 adding 'dendropy-5.0.8.dist-info/METADATA' 2025-06-10T18:47:04,047 adding 'dendropy-5.0.8.dist-info/WHEEL' 2025-06-10T18:47:04,048 adding 'dendropy-5.0.8.dist-info/entry_points.txt' 2025-06-10T18:47:04,049 adding 'dendropy-5.0.8.dist-info/top_level.txt' 2025-06-10T18:47:04,050 adding 'dendropy-5.0.8.dist-info/zip-safe' 2025-06-10T18:47:04,052 adding 'dendropy-5.0.8.dist-info/RECORD' 2025-06-10T18:47:04,062 removing build/bdist.linux-armv7l/wheel 2025-06-10T18:47:04,208 Building wheel for dendropy (setup.py): finished with status 'done' 2025-06-10T18:47:04,215 Created wheel for dendropy: filename=dendropy-5.0.8-py3-none-any.whl size=465221 sha256=4b2177e7efdd852842ddc447290d9cd660ef9de7a55e58f91a671dd2e554c546 2025-06-10T18:47:04,216 Stored in directory: /tmp/pip-ephem-wheel-cache-mdx5vsbp/wheels/78/6b/12/e939736a0935ab1245fdb5e6a5b31074f8b3daa27593470998 2025-06-10T18:47:04,233 Successfully built dendropy 2025-06-10T18:47:04,255 Removed build tracker: '/tmp/pip-build-tracker-vtiwqyt7'