2025-05-30T09:08:28,892 Created temporary directory: /tmp/pip-build-tracker-6q4y61fe 2025-05-30T09:08:28,893 Initialized build tracking at /tmp/pip-build-tracker-6q4y61fe 2025-05-30T09:08:28,894 Created build tracker: /tmp/pip-build-tracker-6q4y61fe 2025-05-30T09:08:28,894 Entered build tracker: /tmp/pip-build-tracker-6q4y61fe 2025-05-30T09:08:28,895 Created temporary directory: /tmp/pip-wheel-s8r2r3hw 2025-05-30T09:08:28,899 Created temporary directory: /tmp/pip-ephem-wheel-cache-alethd2k 2025-05-30T09:08:28,945 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-05-30T09:08:28,947 2 location(s) to search for versions of biobb-model: 2025-05-30T09:08:28,947 * https://pypi.org/simple/biobb-model/ 2025-05-30T09:08:28,947 * https://www.piwheels.org/simple/biobb-model/ 2025-05-30T09:08:28,948 Fetching project page and analyzing links: https://pypi.org/simple/biobb-model/ 2025-05-30T09:08:28,949 Getting page https://pypi.org/simple/biobb-model/ 2025-05-30T09:08:28,951 Found index url https://pypi.org/simple/ 2025-05-30T09:08:29,171 Fetched page https://pypi.org/simple/biobb-model/ as application/vnd.pypi.simple.v1+json 2025-05-30T09:08:29,180 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/04/2c/db35c91a4ada259196299d52a8b6498b7dc40ff4b8003fcdeaacff9ac70c/biobb_model-0.0.1-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.5) 2025-05-30T09:08:29,181 Found link https://files.pythonhosted.org/packages/85/0f/6f47a258873c63f50fb841242ad190a07519d6f427d8064daaa44c21f4a4/biobb_model-0.0.1.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.5), version: 0.0.1 2025-05-30T09:08:29,182 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/6b/ba/b37f10f6878f068ccac4a3c198ba67c9aeb0c1f327ec7d4cbbbd582ab81e/biobb_model-0.0.2-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) 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https://files.pythonhosted.org/packages/77/5b/f55357800936d6787957ab98cbf862693438a39a77e0023ece75c79a95c9/biobb_model-3.7.0.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:==3.7.*) 2025-05-30T09:08:29,223 Skipping link: 3.7.0 Requires-Python ==3.7.*: https://files.pythonhosted.org/packages/77/5b/f55357800936d6787957ab98cbf862693438a39a77e0023ece75c79a95c9/biobb_model-3.7.0.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:==3.7.*) 2025-05-30T09:08:29,223 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/b7/02/0c3182234b591de1f6e7e76a1fed4bc97ecf2a19336cef1e11b05c7daa22/biobb_model-3.8.0-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7) 2025-05-30T09:08:29,224 Found link https://files.pythonhosted.org/packages/91/dd/63a11050517b68ed1587b9b5c756a35695617d3872e3aae99cc655572df0/biobb_model-3.8.0.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7), version: 3.8.0 2025-05-30T09:08:29,225 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/d9/b0/1aaa1a92dfc4cc6ca38e7f474c37623643fb9defeb7c66e273b004e16f47/biobb_model-3.8.1-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7) 2025-05-30T09:08:29,226 Found link https://files.pythonhosted.org/packages/85/a1/b09abb60ba99a4ff93bd32677cf11c9ad85bfd1db7e85bbd77de012fa324/biobb_model-3.8.1.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7), version: 3.8.1 2025-05-30T09:08:29,226 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/db/27/dc83ee08ba09e59ecad1c324530d798b310a2176e8447634811c73593c17/biobb_model-3.9.0-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7) 2025-05-30T09:08:29,227 Found link https://files.pythonhosted.org/packages/37/ed/31c343af01e92fbabed1276f809ad71393ea78b8e6b94cf827b0168c29fa/biobb_model-3.9.0.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7), version: 3.9.0 2025-05-30T09:08:29,227 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/43/18/68c2d00c077d3214e88f4a0a30d2ecf7ff74ed1ae93c787c091b5ecc03e5/biobb_model-4.0.0-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7,<=3.10) 2025-05-30T09:08:29,228 Link requires a different Python (3.11.2 not in: '>=3.7,<=3.10'): https://files.pythonhosted.org/packages/cf/41/19c8dbde6c911741543189e5e83f21acbab2c5948599bc855d894c8c54e3/biobb_model-4.0.0.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7,<=3.10) 2025-05-30T09:08:29,229 Skipping link: 4.0.0 Requires-Python >=3.7,<=3.10: https://files.pythonhosted.org/packages/cf/41/19c8dbde6c911741543189e5e83f21acbab2c5948599bc855d894c8c54e3/biobb_model-4.0.0.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7,<=3.10) 2025-05-30T09:08:29,230 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/c8/31/5ede143ee42d0ed6d4b45cc5524030c7cff73dd0e16f8441cf322af7b789/biobb_model-4.0.1-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7,<3.10) 2025-05-30T09:08:29,231 Link requires a different Python (3.11.2 not in: '>=3.7,<3.10'): https://files.pythonhosted.org/packages/f4/41/12d836ceb095cf08320542be4385d0671f14ade3f487f78cc8c7ffb8ba08/biobb_model-4.0.1.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7,<3.10) 2025-05-30T09:08:29,232 Skipping link: 4.0.1 Requires-Python >=3.7,<3.10: https://files.pythonhosted.org/packages/f4/41/12d836ceb095cf08320542be4385d0671f14ade3f487f78cc8c7ffb8ba08/biobb_model-4.0.1.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.7,<3.10) 2025-05-30T09:08:29,233 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/63/7d/2b2c20c9cd4471851136d030489aacab158a4c5985c43cccb927e5ab10c6/biobb_model-4.1.0-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.8) 2025-05-30T09:08:29,234 Found link https://files.pythonhosted.org/packages/be/06/bfe5c27765c1b9ba82f2852f018907188c19dd8ab353b7d4788f6f6dea17/biobb_model-4.1.0.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.8), version: 4.1.0 2025-05-30T09:08:29,234 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/b4/1d/3070faa671b77f5123263da91b7e47c985cc78b8316f8d401fb613a8616c/biobb_model-4.2.0-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.8) 2025-05-30T09:08:29,235 Found link https://files.pythonhosted.org/packages/36/fe/8cca4e03ced327460d5bb8e42b1a3fedc56665c8fab8728d967916029b48/biobb_model-4.2.0.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.8), version: 4.2.0 2025-05-30T09:08:29,235 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/ab/45/c59c1f5f234ba1a506e7b901d6374f46626d3057b98a5fca8eb6f3117fd9/biobb_model-4.2.1-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.8) 2025-05-30T09:08:29,236 Found link https://files.pythonhosted.org/packages/74/e7/c35bc8c34d7c7beb100b2c06931597f64d44c10f1b5a152ae350845cc051/biobb_model-4.2.1.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.8), version: 4.2.1 2025-05-30T09:08:29,237 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/7a/13/9de94ae15ba8cd44aa2c4f434f41e1d3ef8df6e882b0b71d5d3a7bdea79f/biobb_model-4.2.2-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.8) 2025-05-30T09:08:29,237 Found link https://files.pythonhosted.org/packages/bb/51/0a6fd8e867d854bf8841d7940840dec11c59e9f824b6a4daeee62575c48e/biobb_model-4.2.2.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.8), version: 4.2.2 2025-05-30T09:08:29,238 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/ca/7b/6f54efdfc0a4944614341f57dff221a0cd0a6b1442cfef25d3592d5c6b9e/biobb_model-4.2.3-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.8) 2025-05-30T09:08:29,238 Found link https://files.pythonhosted.org/packages/9b/92/a6e1a33ed1b534f4ea839727fbaf2b18b7cbd3a8b31c676b302914a72784/biobb_model-4.2.3.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.8), version: 4.2.3 2025-05-30T09:08:29,239 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/13/41/ca6697d6cbf3e47c55b742802203f045daef8176d904bace45cea41d5bb3/biobb_model-5.0.0-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.9) 2025-05-30T09:08:29,240 Found link https://files.pythonhosted.org/packages/ad/36/95658483802c38dc20a85e0f129d2867c5e09d96f16868c44f58cdd39a94/biobb_model-5.0.0.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.9), version: 5.0.0 2025-05-30T09:08:29,240 Skipping link: No binaries permitted for biobb-model: https://files.pythonhosted.org/packages/a1/c7/0c2e63decb331be3a39787229ebb2ff313b46d2727319e583f2b284fdbc8/biobb_model-5.1.0-py3-none-any.whl (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.9) 2025-05-30T09:08:29,241 Found link https://files.pythonhosted.org/packages/92/22/a6630144d78d353d3d14b8f60a93d29d3d32f44d957873d26f39c66768e9/biobb_model-5.1.0.tar.gz (from https://pypi.org/simple/biobb-model/) (requires-python:>=3.9), version: 5.1.0 2025-05-30T09:08:29,242 Fetching project page and analyzing links: https://www.piwheels.org/simple/biobb-model/ 2025-05-30T09:08:29,243 Getting page https://www.piwheels.org/simple/biobb-model/ 2025-05-30T09:08:29,244 Found index url https://www.piwheels.org/simple/ 2025-05-30T09:08:29,391 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biobb-model/ 2025-05-30T09:08:30,043 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biobb-model/ 2025-05-30T09:08:31,244 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biobb-model/ 2025-05-30T09:08:33,455 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biobb-model/ 2025-05-30T09:08:37,668 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biobb-model/ 2025-05-30T09:08:37,863 Could not fetch URL https://www.piwheels.org/simple/biobb-model/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/biobb-model/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-05-30T09:08:37,865 Skipping link: not a file: https://www.piwheels.org/simple/biobb-model/ 2025-05-30T09:08:37,865 Skipping link: not a file: https://pypi.org/simple/biobb-model/ 2025-05-30T09:08:37,886 Given no hashes to check 1 links for project 'biobb-model': discarding no candidates 2025-05-30T09:08:37,888 Collecting biobb-model==5.1.0 2025-05-30T09:08:37,890 Created temporary directory: /tmp/pip-unpack-e0wtr_pf 2025-05-30T09:08:38,110 Downloading biobb_model-5.1.0.tar.gz (28 kB) 2025-05-30T09:08:38,186 Added biobb-model==5.1.0 from https://files.pythonhosted.org/packages/92/22/a6630144d78d353d3d14b8f60a93d29d3d32f44d957873d26f39c66768e9/biobb_model-5.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-6q4y61fe' 2025-05-30T09:08:38,188 Running setup.py (path:/tmp/pip-wheel-s8r2r3hw/biobb-model_e15ab6647bc140a7b98c0d292fbee97a/setup.py) egg_info for package biobb-model 2025-05-30T09:08:38,189 Created temporary directory: /tmp/pip-pip-egg-info-4dvisihv 2025-05-30T09:08:38,189 Preparing metadata (setup.py): started 2025-05-30T09:08:38,190 Running command python setup.py egg_info 2025-05-30T09:08:39,050 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-05-30T09:08:39,050 !! 2025-05-30T09:08:39,051 ******************************************************************************** 2025-05-30T09:08:39,052 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-05-30T09:08:39,053 License :: OSI Approved :: Apache Software License 2025-05-30T09:08:39,054 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-05-30T09:08:39,055 ******************************************************************************** 2025-05-30T09:08:39,056 !! 2025-05-30T09:08:39,056 self._finalize_license_expression() 2025-05-30T09:08:39,079 running egg_info 2025-05-30T09:08:39,106 creating /tmp/pip-pip-egg-info-4dvisihv/biobb_model.egg-info 2025-05-30T09:08:39,107 writing /tmp/pip-pip-egg-info-4dvisihv/biobb_model.egg-info/PKG-INFO 2025-05-30T09:08:39,111 writing dependency_links to /tmp/pip-pip-egg-info-4dvisihv/biobb_model.egg-info/dependency_links.txt 2025-05-30T09:08:39,112 writing entry points to /tmp/pip-pip-egg-info-4dvisihv/biobb_model.egg-info/entry_points.txt 2025-05-30T09:08:39,114 writing requirements to /tmp/pip-pip-egg-info-4dvisihv/biobb_model.egg-info/requires.txt 2025-05-30T09:08:39,115 writing top-level names to /tmp/pip-pip-egg-info-4dvisihv/biobb_model.egg-info/top_level.txt 2025-05-30T09:08:39,116 writing manifest file '/tmp/pip-pip-egg-info-4dvisihv/biobb_model.egg-info/SOURCES.txt' 2025-05-30T09:08:39,205 reading manifest file '/tmp/pip-pip-egg-info-4dvisihv/biobb_model.egg-info/SOURCES.txt' 2025-05-30T09:08:39,211 adding license file 'LICENSE' 2025-05-30T09:08:39,214 writing manifest file '/tmp/pip-pip-egg-info-4dvisihv/biobb_model.egg-info/SOURCES.txt' 2025-05-30T09:08:39,319 Preparing metadata (setup.py): finished with status 'done' 2025-05-30T09:08:39,323 Source in /tmp/pip-wheel-s8r2r3hw/biobb-model_e15ab6647bc140a7b98c0d292fbee97a has version 5.1.0, which satisfies requirement biobb-model==5.1.0 from https://files.pythonhosted.org/packages/92/22/a6630144d78d353d3d14b8f60a93d29d3d32f44d957873d26f39c66768e9/biobb_model-5.1.0.tar.gz 2025-05-30T09:08:39,324 Removed biobb-model==5.1.0 from https://files.pythonhosted.org/packages/92/22/a6630144d78d353d3d14b8f60a93d29d3d32f44d957873d26f39c66768e9/biobb_model-5.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-6q4y61fe' 2025-05-30T09:08:39,331 Created temporary directory: /tmp/pip-unpack-9bn__v48 2025-05-30T09:08:39,332 Created temporary directory: /tmp/pip-unpack-lv705mya 2025-05-30T09:08:39,333 Building wheels for collected packages: biobb-model 2025-05-30T09:08:39,337 Created temporary directory: /tmp/pip-wheel-cu3u7laa 2025-05-30T09:08:39,337 DEPRECATION: Building 'biobb-model' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'biobb-model'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-05-30T09:08:39,339 Building wheel for biobb-model (setup.py): started 2025-05-30T09:08:39,340 Destination directory: /tmp/pip-wheel-cu3u7laa 2025-05-30T09:08:39,340 Running command python setup.py bdist_wheel 2025-05-30T09:08:40,145 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-05-30T09:08:40,146 !! 2025-05-30T09:08:40,147 ******************************************************************************** 2025-05-30T09:08:40,147 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-05-30T09:08:40,149 License :: OSI Approved :: Apache Software License 2025-05-30T09:08:40,150 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-05-30T09:08:40,150 ******************************************************************************** 2025-05-30T09:08:40,152 !! 2025-05-30T09:08:40,152 self._finalize_license_expression() 2025-05-30T09:08:40,153 running bdist_wheel 2025-05-30T09:08:40,281 running build 2025-05-30T09:08:40,282 running build_py 2025-05-30T09:08:40,312 creating build/lib/biobb_model 2025-05-30T09:08:40,314 copying biobb_model/__init__.py -> build/lib/biobb_model 2025-05-30T09:08:40,317 creating build/lib/biobb_model/model 2025-05-30T09:08:40,318 copying biobb_model/model/fix_amides.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,321 copying biobb_model/model/fix_pdb_utils.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,324 copying biobb_model/model/__init__.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,326 copying biobb_model/model/checking_log.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,328 copying biobb_model/model/fix_chirality.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,330 copying biobb_model/model/fix_altlocs.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,333 copying biobb_model/model/mutate.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,335 copying biobb_model/model/fix_side_chain.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,337 copying biobb_model/model/common.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,339 copying biobb_model/model/fix_ssbonds.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,342 copying biobb_model/model/fix_pdb.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,344 copying biobb_model/model/fix_backbone.py -> build/lib/biobb_model/model 2025-05-30T09:08:40,347 creating build/lib/biobb_model/test 2025-05-30T09:08:40,348 copying biobb_model/test/__init__.py -> build/lib/biobb_model/test 2025-05-30T09:08:40,351 copying biobb_model/py.typed -> build/lib/biobb_model 2025-05-30T09:08:40,382 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-05-30T09:08:40,382 !! 2025-05-30T09:08:40,384 ******************************************************************************** 2025-05-30T09:08:40,384 Please avoid running ``setup.py`` directly. 2025-05-30T09:08:40,385 Instead, use pypa/build, pypa/installer or other 2025-05-30T09:08:40,385 standards-based tools. 2025-05-30T09:08:40,386 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-05-30T09:08:40,386 or your builds will no longer be supported. 2025-05-30T09:08:40,387 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-05-30T09:08:40,388 ******************************************************************************** 2025-05-30T09:08:40,389 !! 2025-05-30T09:08:40,389 self.initialize_options() 2025-05-30T09:08:40,409 installing to build/bdist.linux-armv7l/wheel 2025-05-30T09:08:40,410 running install 2025-05-30T09:08:40,434 running install_lib 2025-05-30T09:08:40,460 creating build/bdist.linux-armv7l/wheel 2025-05-30T09:08:40,462 creating build/bdist.linux-armv7l/wheel/biobb_model 2025-05-30T09:08:40,464 copying build/lib/biobb_model/__init__.py -> build/bdist.linux-armv7l/wheel/./biobb_model 2025-05-30T09:08:40,465 copying build/lib/biobb_model/py.typed -> build/bdist.linux-armv7l/wheel/./biobb_model 2025-05-30T09:08:40,468 creating build/bdist.linux-armv7l/wheel/biobb_model/model 2025-05-30T09:08:40,469 copying build/lib/biobb_model/model/fix_amides.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,471 copying build/lib/biobb_model/model/fix_pdb_utils.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,475 copying build/lib/biobb_model/model/__init__.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,477 copying build/lib/biobb_model/model/checking_log.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,479 copying build/lib/biobb_model/model/fix_chirality.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,481 copying build/lib/biobb_model/model/fix_altlocs.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,484 copying build/lib/biobb_model/model/mutate.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,486 copying build/lib/biobb_model/model/fix_side_chain.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,488 copying build/lib/biobb_model/model/common.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,491 copying build/lib/biobb_model/model/fix_ssbonds.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,493 copying build/lib/biobb_model/model/fix_pdb.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,496 copying build/lib/biobb_model/model/fix_backbone.py -> build/bdist.linux-armv7l/wheel/./biobb_model/model 2025-05-30T09:08:40,498 creating build/bdist.linux-armv7l/wheel/biobb_model/test 2025-05-30T09:08:40,500 copying build/lib/biobb_model/test/__init__.py -> build/bdist.linux-armv7l/wheel/./biobb_model/test 2025-05-30T09:08:40,502 running install_egg_info 2025-05-30T09:08:40,535 running egg_info 2025-05-30T09:08:40,562 writing biobb_model.egg-info/PKG-INFO 2025-05-30T09:08:40,565 writing dependency_links to biobb_model.egg-info/dependency_links.txt 2025-05-30T09:08:40,567 writing entry points to biobb_model.egg-info/entry_points.txt 2025-05-30T09:08:40,569 writing requirements to biobb_model.egg-info/requires.txt 2025-05-30T09:08:40,570 writing top-level names to biobb_model.egg-info/top_level.txt 2025-05-30T09:08:40,602 reading manifest file 'biobb_model.egg-info/SOURCES.txt' 2025-05-30T09:08:40,605 adding license file 'LICENSE' 2025-05-30T09:08:40,609 writing manifest file 'biobb_model.egg-info/SOURCES.txt' 2025-05-30T09:08:40,611 Copying biobb_model.egg-info to build/bdist.linux-armv7l/wheel/./biobb_model-5.1.0-py3.11.egg-info 2025-05-30T09:08:40,622 running install_scripts 2025-05-30T09:08:40,636 creating build/bdist.linux-armv7l/wheel/biobb_model-5.1.0.dist-info/WHEEL 2025-05-30T09:08:40,638 creating '/tmp/pip-wheel-cu3u7laa/biobb_model-5.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-05-30T09:08:40,641 adding 'biobb_model/__init__.py' 2025-05-30T09:08:40,642 adding 'biobb_model/py.typed' 2025-05-30T09:08:40,644 adding 'biobb_model/model/__init__.py' 2025-05-30T09:08:40,646 adding 'biobb_model/model/checking_log.py' 2025-05-30T09:08:40,648 adding 'biobb_model/model/common.py' 2025-05-30T09:08:40,650 adding 'biobb_model/model/fix_altlocs.py' 2025-05-30T09:08:40,652 adding 'biobb_model/model/fix_amides.py' 2025-05-30T09:08:40,655 adding 'biobb_model/model/fix_backbone.py' 2025-05-30T09:08:40,656 adding 'biobb_model/model/fix_chirality.py' 2025-05-30T09:08:40,659 adding 'biobb_model/model/fix_pdb.py' 2025-05-30T09:08:40,665 adding 'biobb_model/model/fix_pdb_utils.py' 2025-05-30T09:08:40,668 adding 'biobb_model/model/fix_side_chain.py' 2025-05-30T09:08:40,670 adding 'biobb_model/model/fix_ssbonds.py' 2025-05-30T09:08:40,672 adding 'biobb_model/model/mutate.py' 2025-05-30T09:08:40,674 adding 'biobb_model/test/__init__.py' 2025-05-30T09:08:40,678 adding 'biobb_model-5.1.0.dist-info/licenses/LICENSE' 2025-05-30T09:08:40,680 adding 'biobb_model-5.1.0.dist-info/METADATA' 2025-05-30T09:08:40,681 adding 'biobb_model-5.1.0.dist-info/WHEEL' 2025-05-30T09:08:40,682 adding 'biobb_model-5.1.0.dist-info/entry_points.txt' 2025-05-30T09:08:40,684 adding 'biobb_model-5.1.0.dist-info/top_level.txt' 2025-05-30T09:08:40,685 adding 'biobb_model-5.1.0.dist-info/RECORD' 2025-05-30T09:08:40,687 removing build/bdist.linux-armv7l/wheel 2025-05-30T09:08:40,800 Building wheel for biobb-model (setup.py): finished with status 'done' 2025-05-30T09:08:40,803 Created wheel for biobb-model: filename=biobb_model-5.1.0-py3-none-any.whl size=40936 sha256=1d0fdd364c02038e3ccc3fffc0e103d280886cf2fcc778e7a79f4607e0a2fb7f 2025-05-30T09:08:40,804 Stored in directory: /tmp/pip-ephem-wheel-cache-alethd2k/wheels/b8/b4/fb/db8d0d0f4f42e18ad174d77901a5c128a0f58fb229ae6d3825 2025-05-30T09:08:40,815 Successfully built biobb-model 2025-05-30T09:08:40,820 Removed build tracker: '/tmp/pip-build-tracker-6q4y61fe'