2025-05-30T19:12:48,952 Created temporary directory: /tmp/pip-build-tracker-wnf4zddw 2025-05-30T19:12:48,953 Initialized build tracking at /tmp/pip-build-tracker-wnf4zddw 2025-05-30T19:12:48,954 Created build tracker: /tmp/pip-build-tracker-wnf4zddw 2025-05-30T19:12:48,954 Entered build tracker: /tmp/pip-build-tracker-wnf4zddw 2025-05-30T19:12:48,955 Created temporary directory: /tmp/pip-wheel-ij37_p95 2025-05-30T19:12:48,959 Created temporary directory: /tmp/pip-ephem-wheel-cache-6h5xjr4l 2025-05-30T19:12:49,015 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-05-30T19:12:49,017 2 location(s) to search for versions of biorefineries: 2025-05-30T19:12:49,017 * https://pypi.org/simple/biorefineries/ 2025-05-30T19:12:49,017 * https://www.piwheels.org/simple/biorefineries/ 2025-05-30T19:12:49,018 Fetching project page and analyzing links: https://pypi.org/simple/biorefineries/ 2025-05-30T19:12:49,019 Getting page https://pypi.org/simple/biorefineries/ 2025-05-30T19:12:49,020 Found index url https://pypi.org/simple/ 2025-05-30T19:12:49,185 Fetched page https://pypi.org/simple/biorefineries/ as application/vnd.pypi.simple.v1+json 2025-05-30T19:12:49,213 Found link https://files.pythonhosted.org/packages/93/5f/2130954ba2b19d157fe9844c04529b7defcb175decaab57c971a85230003/biorefineries-0.1.tar.gz (from https://pypi.org/simple/biorefineries/), version: 0.1 2025-05-30T19:12:49,214 Found link https://files.pythonhosted.org/packages/67/d4/6293c959a1e87b21ad94960a3b0c90f77b865b32ec0f9efa995021bc52c0/biorefineries-0.1.1.tar.gz (from https://pypi.org/simple/biorefineries/), version: 0.1.1 2025-05-30T19:12:49,216 Found link https://files.pythonhosted.org/packages/7d/f6/4e0d65dbfc51726c8d40609899ed77c0a237a4f33ca07c1fec66f9ea033f/biorefineries-0.1.2.tar.gz (from https://pypi.org/simple/biorefineries/), version: 0.1.2 2025-05-30T19:12:49,216 Found link 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https://files.pythonhosted.org/packages/54/ad/b1d223661c615f621ccf9d96d56e2cac4aff237ab7b67df89de87e97856a/biorefineries-2.24.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.24.0 2025-05-30T19:12:49,307 Found link https://files.pythonhosted.org/packages/cb/cd/2c6590a3707b128e2e18f88e5e8bafc11f66c696b13cd48a8d3904c1a7e9/biorefineries-2.25.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.25.0 2025-05-30T19:12:49,308 Found link https://files.pythonhosted.org/packages/0a/fb/ab19a7d509067bd1a3e6b5a3206353f76a20d0560a993bcc54f3834271d1/biorefineries-2.26.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.26.0 2025-05-30T19:12:49,309 Found link https://files.pythonhosted.org/packages/aa/11/6b1b4699e6f73e913ad9aba24dcc47b4bf71326f89560a9991da01d2ce2a/biorefineries-2.26.1.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.26.1 2025-05-30T19:12:49,310 Found link https://files.pythonhosted.org/packages/bd/27/da932b8ccd134a8cf91e3255a895f0e7b4ca5be730f4f647aaaf5707b129/biorefineries-2.26.2.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.26.2 2025-05-30T19:12:49,310 Found link https://files.pythonhosted.org/packages/a1/be/361e29090e4c191970a776e0825984963b7af2af3b3e187478dfa7fd1aeb/biorefineries-2.26.3.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.26.3 2025-05-30T19:12:49,311 Found link https://files.pythonhosted.org/packages/8c/93/3f84da15e7cae7dc3ea52b9aecbc04ec3c0a94a38a1dd37fb5ee19db62d5/biorefineries-2.27.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.27.0 2025-05-30T19:12:49,311 Found link https://files.pythonhosted.org/packages/fc/5b/dfbd1b69f7a3973cab60cb6b5956beea3b592f4dc52dfd5e22debaaa1eb4/biorefineries-2.28.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.28.0 2025-05-30T19:12:49,312 Found link https://files.pythonhosted.org/packages/a0/61/1dc078b2a9edb2aa6bbb811ef0284a2ce28ede5c47e4cdfa2a91e2af8602/biorefineries-2.29.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.29.0 2025-05-30T19:12:49,313 Found link https://files.pythonhosted.org/packages/43/d5/88b9e32b0aca0f72eeaa244a249a3506e535fac5aad149d9f07095eaf234/biorefineries-2.30.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.30.0 2025-05-30T19:12:49,313 Found link https://files.pythonhosted.org/packages/98/98/25db2013c0782c05b56be59643001bb6eb957774aab20bcde13c565dd393/biorefineries-2.31.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.31.0 2025-05-30T19:12:49,314 Found link https://files.pythonhosted.org/packages/e0/73/94787709c74a6024177a42f16af9934dec2d00a01fd8248e2c0783e5c4eb/biorefineries-2.32.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.32.0 2025-05-30T19:12:49,315 Found link https://files.pythonhosted.org/packages/00/b3/a660dd043e4da0555f31eb963f6db57871d72ea292e21ac069e07e08261a/biorefineries-2.32.1.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.32.1 2025-05-30T19:12:49,315 Found link https://files.pythonhosted.org/packages/f5/df/e2806eb3a5d1cc2fce1d47b9eee568041b7ba168e5f79a254e40bc31d567/biorefineries-2.32.2.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.32.2 2025-05-30T19:12:49,316 Found link https://files.pythonhosted.org/packages/1a/01/a509b9fa25b473c4946e5d0e473ac9e8487155fcde435faf732381059ed3/biorefineries-2.34.0.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.0 2025-05-30T19:12:49,317 Found link https://files.pythonhosted.org/packages/88/99/a281c21d0fa3f18a3f0b1305ef0d8f37af2007be26cfaa2fdbd18f0e38c4/biorefineries-2.34.1.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.1 2025-05-30T19:12:49,318 Found link https://files.pythonhosted.org/packages/a5/7c/75c89a881b44fd613e1a726018ff2e990c7cd004b99c373e001b22d3e7da/biorefineries-2.34.2.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.2 2025-05-30T19:12:49,318 Found link https://files.pythonhosted.org/packages/d0/18/21936150b0aaced289ca0ce66b8c1849aea0e6b697c37c30366c4544bc3c/biorefineries-2.34.3.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.3 2025-05-30T19:12:49,319 Found link https://files.pythonhosted.org/packages/eb/30/282559d3858fee72e9ac2f0243c9a6e2d6107c452cc0a2a81c800c08f0da/biorefineries-2.34.4.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.4 2025-05-30T19:12:49,320 Found link https://files.pythonhosted.org/packages/7f/a2/965957e84893d444df2ac691b41796b08a90c5135226d76b2199f6cac473/biorefineries-2.34.5.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.5 2025-05-30T19:12:49,321 Found link https://files.pythonhosted.org/packages/de/e5/75d96878c9156b59227c4b9587466d58b879f91b48ae509ed2d44a604f58/biorefineries-2.34.6.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.6 2025-05-30T19:12:49,321 Found link https://files.pythonhosted.org/packages/dc/f0/7645088da65009a981a08e0d0c7e21342e4fa9e7a1ab0392ed25e88c63a7/biorefineries-2.34.7.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.7 2025-05-30T19:12:49,322 Found link https://files.pythonhosted.org/packages/24/6f/2fbd894ecce9381baa00fa7d057bbc742b1665d759149b70b6a41ca8b045/biorefineries-2.34.8.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.8 2025-05-30T19:12:49,323 Found link https://files.pythonhosted.org/packages/e0/fb/df23010230202a6caf5a966342497ab01795297ce3ee4212b15143e8c5ce/biorefineries-2.34.9.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.9 2025-05-30T19:12:49,323 Found link https://files.pythonhosted.org/packages/90/35/ed933b7d09f1f4b9de3c0f16e1092516022744ca6240c828e86d15988fc4/biorefineries-2.34.10.tar.gz (from https://pypi.org/simple/biorefineries/) (requires-python:>=3.9), version: 2.34.10 2025-05-30T19:12:49,324 Fetching project page and analyzing links: https://www.piwheels.org/simple/biorefineries/ 2025-05-30T19:12:49,325 Getting page https://www.piwheels.org/simple/biorefineries/ 2025-05-30T19:12:49,326 Found index url https://www.piwheels.org/simple/ 2025-05-30T19:12:49,492 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biorefineries/ 2025-05-30T19:12:50,157 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biorefineries/ 2025-05-30T19:12:51,331 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biorefineries/ 2025-05-30T19:12:53,503 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biorefineries/ 2025-05-30T19:12:57,679 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/biorefineries/ 2025-05-30T19:12:57,851 Could not fetch URL https://www.piwheels.org/simple/biorefineries/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/biorefineries/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-05-30T19:12:57,852 Skipping link: not a file: https://www.piwheels.org/simple/biorefineries/ 2025-05-30T19:12:57,853 Skipping link: not a file: https://pypi.org/simple/biorefineries/ 2025-05-30T19:12:57,892 Given no hashes to check 1 links for project 'biorefineries': discarding no candidates 2025-05-30T19:12:57,895 Collecting biorefineries==2.34.9 2025-05-30T19:12:57,897 Created temporary directory: /tmp/pip-unpack-4tmm_x17 2025-05-30T19:12:58,136 Downloading biorefineries-2.34.9.tar.gz (22.1 MB) 2025-05-30T19:13:03,332 Added biorefineries==2.34.9 from https://files.pythonhosted.org/packages/e0/fb/df23010230202a6caf5a966342497ab01795297ce3ee4212b15143e8c5ce/biorefineries-2.34.9.tar.gz to build tracker '/tmp/pip-build-tracker-wnf4zddw' 2025-05-30T19:13:03,335 Running setup.py (path:/tmp/pip-wheel-ij37_p95/biorefineries_8442e8a655a4477bbfe03b4f53cf4ae9/setup.py) egg_info for package biorefineries 2025-05-30T19:13:03,337 Created temporary directory: /tmp/pip-pip-egg-info-wxamro8f 2025-05-30T19:13:03,338 Preparing metadata (setup.py): started 2025-05-30T19:13:03,339 Running command python setup.py egg_info 2025-05-30T19:13:04,235 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-05-30T19:13:04,235 !! 2025-05-30T19:13:04,236 ******************************************************************************** 2025-05-30T19:13:04,237 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-05-30T19:13:04,238 License :: OSI Approved :: MIT License 2025-05-30T19:13:04,239 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-05-30T19:13:04,239 ******************************************************************************** 2025-05-30T19:13:04,240 !! 2025-05-30T19:13:04,241 self._finalize_license_expression() 2025-05-30T19:13:04,267 running egg_info 2025-05-30T19:13:04,296 creating /tmp/pip-pip-egg-info-wxamro8f/biorefineries.egg-info 2025-05-30T19:13:04,297 writing /tmp/pip-pip-egg-info-wxamro8f/biorefineries.egg-info/PKG-INFO 2025-05-30T19:13:04,300 writing dependency_links to /tmp/pip-pip-egg-info-wxamro8f/biorefineries.egg-info/dependency_links.txt 2025-05-30T19:13:04,302 writing requirements to /tmp/pip-pip-egg-info-wxamro8f/biorefineries.egg-info/requires.txt 2025-05-30T19:13:04,303 writing top-level names to /tmp/pip-pip-egg-info-wxamro8f/biorefineries.egg-info/top_level.txt 2025-05-30T19:13:04,305 writing manifest file '/tmp/pip-pip-egg-info-wxamro8f/biorefineries.egg-info/SOURCES.txt' 2025-05-30T19:13:04,561 reading manifest file '/tmp/pip-pip-egg-info-wxamro8f/biorefineries.egg-info/SOURCES.txt' 2025-05-30T19:13:04,563 adding license file 'LICENSE.txt' 2025-05-30T19:13:04,575 writing manifest file '/tmp/pip-pip-egg-info-wxamro8f/biorefineries.egg-info/SOURCES.txt' 2025-05-30T19:13:04,679 Preparing metadata (setup.py): finished with status 'done' 2025-05-30T19:13:04,684 Source in /tmp/pip-wheel-ij37_p95/biorefineries_8442e8a655a4477bbfe03b4f53cf4ae9 has version 2.34.9, which satisfies requirement biorefineries==2.34.9 from https://files.pythonhosted.org/packages/e0/fb/df23010230202a6caf5a966342497ab01795297ce3ee4212b15143e8c5ce/biorefineries-2.34.9.tar.gz 2025-05-30T19:13:04,684 Removed biorefineries==2.34.9 from https://files.pythonhosted.org/packages/e0/fb/df23010230202a6caf5a966342497ab01795297ce3ee4212b15143e8c5ce/biorefineries-2.34.9.tar.gz from build tracker '/tmp/pip-build-tracker-wnf4zddw' 2025-05-30T19:13:04,691 Created temporary directory: /tmp/pip-unpack-no8_skqc 2025-05-30T19:13:04,692 Created temporary directory: /tmp/pip-unpack-mzfeg4mx 2025-05-30T19:13:04,692 Building wheels for collected packages: biorefineries 2025-05-30T19:13:04,696 Created temporary directory: /tmp/pip-wheel-yfw6iqiw 2025-05-30T19:13:04,697 DEPRECATION: Building 'biorefineries' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'biorefineries'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-05-30T19:13:04,699 Building wheel for biorefineries (setup.py): started 2025-05-30T19:13:04,700 Destination directory: /tmp/pip-wheel-yfw6iqiw 2025-05-30T19:13:04,700 Running command python setup.py bdist_wheel 2025-05-30T19:13:05,531 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-05-30T19:13:05,532 !! 2025-05-30T19:13:05,533 ******************************************************************************** 2025-05-30T19:13:05,533 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-05-30T19:13:05,534 License :: OSI Approved :: MIT License 2025-05-30T19:13:05,535 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-05-30T19:13:05,535 ******************************************************************************** 2025-05-30T19:13:05,537 !! 2025-05-30T19:13:05,537 self._finalize_license_expression() 2025-05-30T19:13:05,538 running bdist_wheel 2025-05-30T19:13:05,676 running build 2025-05-30T19:13:05,677 running build_py 2025-05-30T19:13:05,709 creating build/lib/biorefineries 2025-05-30T19:13:05,711 copying biorefineries/__init__.py -> build/lib/biorefineries 2025-05-30T19:13:05,744 creating build/lib/biorefineries/cane 2025-05-30T19:13:05,745 copying biorefineries/cane/evaluation.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,749 copying biorefineries/cane/composition.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,752 copying biorefineries/cane/contour_plots.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,755 copying biorefineries/cane/results.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,758 copying biorefineries/cane/feature_mockups.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,761 copying biorefineries/cane/configurations_biomass_yield_analysis.npy -> build/lib/biorefineries/cane 2025-05-30T19:13:05,765 copying biorefineries/cane/streams.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,767 copying biorefineries/cane/__init__.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,769 copying biorefineries/cane/parse_configuration.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,771 copying biorefineries/cane/oil_extraction.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,774 copying biorefineries/cane/rename_soon.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,777 copying biorefineries/cane/process_settings.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,779 copying biorefineries/cane/chemicals.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,782 copying biorefineries/cane/uncertainty_plots.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,786 copying biorefineries/cane/units.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,789 copying biorefineries/cane/tables.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,792 copying biorefineries/cane/README.md -> build/lib/biorefineries/cane 2025-05-30T19:13:05,795 copying biorefineries/cane/biorefinery.py -> build/lib/biorefineries/cane 2025-05-30T19:13:05,800 creating build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,801 copying biorefineries/cane/systems/cellulosic_biodiesel_actag.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,804 copying biorefineries/cane/systems/biodiesel.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,807 copying biorefineries/cane/systems/biodiesel_actag.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,810 copying biorefineries/cane/systems/fermentation.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,813 copying biorefineries/cane/systems/sugar.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,816 copying biorefineries/cane/systems/__init__.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,819 copying biorefineries/cane/systems/juicing.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,821 copying biorefineries/cane/systems/lipidcane.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,824 copying biorefineries/cane/systems/bagasse.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,826 copying biorefineries/cane/systems/lipid_extraction.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,829 copying biorefineries/cane/systems/cellulosic_biodiesel.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,832 copying biorefineries/cane/systems/pretreatment.py -> build/lib/biorefineries/cane/systems 2025-05-30T19:13:05,834 creating build/lib/biorefineries/cane/systems/oilcane 2025-05-30T19:13:05,835 copying biorefineries/cane/systems/oilcane/crude_oil_ethanol.py -> build/lib/biorefineries/cane/systems/oilcane 2025-05-30T19:13:05,838 copying biorefineries/cane/systems/oilcane/__init__.py -> build/lib/biorefineries/cane/systems/oilcane 2025-05-30T19:13:05,840 copying biorefineries/cane/systems/oilcane/cellulosic_crude_oil_ethanol.py -> build/lib/biorefineries/cane/systems/oilcane 2025-05-30T19:13:05,843 copying biorefineries/cane/systems/oilcane/cellulosic_biodiesel_ethanol.py -> build/lib/biorefineries/cane/systems/oilcane 2025-05-30T19:13:05,846 copying biorefineries/cane/systems/oilcane/biodiesel_ethanol.py -> build/lib/biorefineries/cane/systems/oilcane 2025-05-30T19:13:05,848 creating build/lib/biorefineries/cane/systems/sugarcane 2025-05-30T19:13:05,850 copying biorefineries/cane/systems/sugarcane/sugar_ethanol.py -> build/lib/biorefineries/cane/systems/sugarcane 2025-05-30T19:13:05,853 copying biorefineries/cane/systems/sugarcane/__init__.py -> build/lib/biorefineries/cane/systems/sugarcane 2025-05-30T19:13:05,855 copying biorefineries/cane/systems/sugarcane/ethanol.py -> build/lib/biorefineries/cane/systems/sugarcane 2025-05-30T19:13:05,858 copying biorefineries/cane/systems/sugarcane/cellulosic_ethanol.py -> build/lib/biorefineries/cane/systems/sugarcane 2025-05-30T19:13:05,860 creating build/lib/biorefineries/milk 2025-05-30T19:13:05,861 copying biorefineries/milk/GalactoOligoSaccharideProcess.xlsx -> build/lib/biorefineries/milk 2025-05-30T19:13:05,905 copying biorefineries/milk/systems.py -> build/lib/biorefineries/milk 2025-05-30T19:13:05,907 copying biorefineries/milk/__init__.py -> build/lib/biorefineries/milk 2025-05-30T19:13:05,909 copying biorefineries/milk/data.py -> build/lib/biorefineries/milk 2025-05-30T19:13:05,912 copying biorefineries/milk/uncertainty.py -> build/lib/biorefineries/milk 2025-05-30T19:13:05,915 copying biorefineries/milk/process_settings.py -> build/lib/biorefineries/milk 2025-05-30T19:13:05,917 copying biorefineries/milk/chemicals.py -> build/lib/biorefineries/milk 2025-05-30T19:13:05,920 copying biorefineries/milk/units.py -> build/lib/biorefineries/milk 2025-05-30T19:13:05,922 copying biorefineries/milk/README.md -> build/lib/biorefineries/milk 2025-05-30T19:13:05,925 copying biorefineries/milk/plots.py -> build/lib/biorefineries/milk 2025-05-30T19:13:05,927 copying biorefineries/milk/tests.py -> build/lib/biorefineries/milk 2025-05-30T19:13:05,930 copying biorefineries/milk/biorefinery.py -> build/lib/biorefineries/milk 2025-05-30T19:13:05,933 creating build/lib/biorefineries/milk/images 2025-05-30T19:13:05,934 copying biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.png -> build/lib/biorefineries/milk/images 2025-05-30T19:13:05,946 copying biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.svg -> build/lib/biorefineries/milk/images 2025-05-30T19:13:05,951 copying biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.svg -> build/lib/biorefineries/milk/images 2025-05-30T19:13:05,957 copying biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.svg -> build/lib/biorefineries/milk/images 2025-05-30T19:13:05,962 copying biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.png -> build/lib/biorefineries/milk/images 2025-05-30T19:13:05,972 copying biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.png -> build/lib/biorefineries/milk/images 2025-05-30T19:13:05,982 creating build/lib/biorefineries/milk/results 2025-05-30T19:13:05,983 copying biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate_GlucoseMedia.npy -> build/lib/biorefineries/milk/results 2025-05-30T19:13:05,986 copying biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_GlucoseMedia.npy -> build/lib/biorefineries/milk/results 2025-05-30T19:13:05,989 copying biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate.npy -> build/lib/biorefineries/milk/results 2025-05-30T19:13:05,992 creating build/lib/biorefineries/cane/data 2025-05-30T19:13:05,993 copying biorefineries/cane/data/microbial_oil_baseline.py -> build/lib/biorefineries/cane/data 2025-05-30T19:13:05,995 copying biorefineries/cane/data/price_distributions_2022.py -> build/lib/biorefineries/cane/data 2025-05-30T19:13:05,998 copying biorefineries/cane/data/RIN_prices_2022.csv -> build/lib/biorefineries/cane/data 2025-05-30T19:13:06,007 copying biorefineries/cane/data/price_distributions_2023.py -> build/lib/biorefineries/cane/data 2025-05-30T19:13:06,010 copying biorefineries/cane/data/lca_characterization_factors.py -> build/lib/biorefineries/cane/data 2025-05-30T19:13:06,012 copying biorefineries/cane/data/cane_composition_data.xlsx -> build/lib/biorefineries/cane/data 2025-05-30T19:13:06,015 copying biorefineries/cane/data/cane_composition_data_full.xlsx -> build/lib/biorefineries/cane/data 2025-05-30T19:13:06,018 copying biorefineries/cane/data/RIN_prices_2023.csv -> build/lib/biorefineries/cane/data 2025-05-30T19:13:06,025 creating build/lib/biorefineries/cellulosic 2025-05-30T19:13:06,026 copying biorefineries/cellulosic/streams.py -> build/lib/biorefineries/cellulosic 2025-05-30T19:13:06,029 copying biorefineries/cellulosic/__init__.py -> build/lib/biorefineries/cellulosic 2025-05-30T19:13:06,032 copying biorefineries/cellulosic/process_settings.py -> build/lib/biorefineries/cellulosic 2025-05-30T19:13:06,035 copying biorefineries/cellulosic/chemicals.py -> build/lib/biorefineries/cellulosic 2025-05-30T19:13:06,038 copying biorefineries/cellulosic/units.py -> build/lib/biorefineries/cellulosic 2025-05-30T19:13:06,042 copying biorefineries/cellulosic/biorefinery.py -> build/lib/biorefineries/cellulosic 2025-05-30T19:13:06,044 creating build/lib/biorefineries/cellulosic/systems 2025-05-30T19:13:06,045 copying biorefineries/cellulosic/systems/__init__.py -> build/lib/biorefineries/cellulosic/systems 2025-05-30T19:13:06,048 copying biorefineries/cellulosic/systems/cellulosic_ethanol.py -> build/lib/biorefineries/cellulosic/systems 2025-05-30T19:13:06,051 creating build/lib/biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:06,052 copying biorefineries/cellulosic/systems/fermentation/integrated_bioprocess.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:06,055 copying biorefineries/cellulosic/systems/fermentation/cofermentation.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:06,057 copying biorefineries/cellulosic/systems/fermentation/general_interface.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:06,061 copying biorefineries/cellulosic/systems/fermentation/saccharification.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:06,063 copying biorefineries/cellulosic/systems/fermentation/simultaneous_saccharification_cofermentation.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:06,066 copying biorefineries/cellulosic/systems/fermentation/__init__.py -> build/lib/biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:06,069 creating build/lib/biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:06,070 copying biorefineries/cellulosic/systems/pretreatment/dilute_acid.py -> build/lib/biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:06,073 copying biorefineries/cellulosic/systems/pretreatment/__init__.py -> build/lib/biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:06,076 copying biorefineries/cellulosic/systems/pretreatment/alkaline.py -> build/lib/biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:06,078 copying biorefineries/cellulosic/systems/pretreatment/hot_water.py -> build/lib/biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:06,081 copying biorefineries/cellulosic/systems/pretreatment/ammonia_fiber_expansion.py -> build/lib/biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:06,084 creating build/lib/biorefineries/ethanol 2025-05-30T19:13:06,085 copying biorefineries/ethanol/systems.py -> build/lib/biorefineries/ethanol 2025-05-30T19:13:06,088 copying biorefineries/ethanol/streams.py -> build/lib/biorefineries/ethanol 2025-05-30T19:13:06,090 copying biorefineries/ethanol/__init__.py -> build/lib/biorefineries/ethanol 2025-05-30T19:13:06,092 creating build/lib/biorefineries/biodiesel 2025-05-30T19:13:06,094 copying biorefineries/biodiesel/systems.py -> build/lib/biorefineries/biodiesel 2025-05-30T19:13:06,097 copying biorefineries/biodiesel/streams.py -> build/lib/biorefineries/biodiesel 2025-05-30T19:13:06,099 copying biorefineries/biodiesel/__init__.py -> build/lib/biorefineries/biodiesel 2025-05-30T19:13:06,101 creating build/lib/biorefineries/biodiesel/units 2025-05-30T19:13:06,102 copying biorefineries/biodiesel/units/__init__.py -> build/lib/biorefineries/biodiesel/units 2025-05-30T19:13:06,105 copying biorefineries/biodiesel/units/transesterification.py -> build/lib/biorefineries/biodiesel/units 2025-05-30T19:13:06,108 copying biorefineries/biodiesel/units/glycerolysis_reactor.py -> build/lib/biorefineries/biodiesel/units 2025-05-30T19:13:06,110 copying biorefineries/biodiesel/units/skimming_tank.py -> build/lib/biorefineries/biodiesel/units 2025-05-30T19:13:06,113 creating build/lib/biorefineries/tea 2025-05-30T19:13:06,114 copying biorefineries/tea/conventional_ethanol_tea.py -> build/lib/biorefineries/tea 2025-05-30T19:13:06,117 copying biorefineries/tea/cellulosic_ethanol_tea.py -> build/lib/biorefineries/tea 2025-05-30T19:13:06,120 copying biorefineries/tea/__init__.py -> build/lib/biorefineries/tea 2025-05-30T19:13:06,123 creating build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,124 copying biorefineries/lipidcane/README.rst -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,127 copying biorefineries/lipidcane/_webapp_model.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,130 copying biorefineries/lipidcane/_tea.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,133 copying biorefineries/lipidcane/_plot_spearman.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,136 copying biorefineries/lipidcane/sankey_plot.ipynb -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,198 copying biorefineries/lipidcane/_plot_uncertainty.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,201 copying biorefineries/lipidcane/__init__.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,203 copying biorefineries/lipidcane/_feedstock_analysis.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,206 copying biorefineries/lipidcane/_chemicals.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,208 copying biorefineries/lipidcane/_system.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,211 copying biorefineries/lipidcane/_analysis.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,213 copying biorefineries/lipidcane/_process_settings.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,216 copying biorefineries/lipidcane/model.py -> build/lib/biorefineries/lipidcane 2025-05-30T19:13:06,219 creating build/lib/biorefineries/oilcane 2025-05-30T19:13:06,220 copying biorefineries/oilcane/_evaluation.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,223 copying biorefineries/oilcane/_tea.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,226 copying biorefineries/oilcane/_uncertainty_plots.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,231 copying biorefineries/oilcane/sankey_energy.ipynb -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,309 copying biorefineries/oilcane/sankey_plot.ipynb -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,313 copying biorefineries/oilcane/_contour_plots.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,316 copying biorefineries/oilcane/_tables.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,318 copying biorefineries/oilcane/_parse_configuration.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,321 copying biorefineries/oilcane/_feature_mockups.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,323 copying biorefineries/oilcane/systems.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,325 copying biorefineries/oilcane/__init__.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,328 copying biorefineries/oilcane/_line_plots.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,330 copying biorefineries/oilcane/_chemicals.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,332 copying biorefineries/oilcane/units.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,335 copying biorefineries/oilcane/_load_data.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,338 copying biorefineries/oilcane/utils.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,341 copying biorefineries/oilcane/README.md -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,344 copying biorefineries/oilcane/lca_benchmarks.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,347 copying biorefineries/oilcane/webapp_model.py -> build/lib/biorefineries/oilcane 2025-05-30T19:13:06,350 creating build/lib/biorefineries/cornstover 2025-05-30T19:13:06,351 copying biorefineries/cornstover/README.rst -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,354 copying biorefineries/cornstover/_switchgrass.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,357 copying biorefineries/cornstover/_tea.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,359 copying biorefineries/cornstover/_plot_single_point.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,362 copying biorefineries/cornstover/_legacy_code.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,365 copying biorefineries/cornstover/_plot_spearman.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,368 copying biorefineries/cornstover/_plot_uncertainty.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,371 copying biorefineries/cornstover/systems.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,373 copying biorefineries/cornstover/__init__.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,376 copying biorefineries/cornstover/_chemicals.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,379 copying biorefineries/cornstover/_analysis.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,381 copying biorefineries/cornstover/units.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,383 copying biorefineries/cornstover/_sankey.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,386 copying biorefineries/cornstover/_process_settings.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,388 copying biorefineries/cornstover/model.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,391 copying biorefineries/cornstover/webapp_model.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,393 copying biorefineries/cornstover/_plot_bars.py -> build/lib/biorefineries/cornstover 2025-05-30T19:13:06,396 creating build/lib/biorefineries/corn 2025-05-30T19:13:06,397 copying biorefineries/corn/tea.py -> build/lib/biorefineries/corn 2025-05-30T19:13:06,400 copying biorefineries/corn/systems.py -> build/lib/biorefineries/corn 2025-05-30T19:13:06,403 copying biorefineries/corn/__init__.py -> build/lib/biorefineries/corn 2025-05-30T19:13:06,405 copying biorefineries/corn/process_settings.py -> build/lib/biorefineries/corn 2025-05-30T19:13:06,408 copying biorefineries/corn/chemicals.py -> build/lib/biorefineries/corn 2025-05-30T19:13:06,410 copying biorefineries/corn/units.py -> build/lib/biorefineries/corn 2025-05-30T19:13:06,413 copying biorefineries/corn/utils.py -> build/lib/biorefineries/corn 2025-05-30T19:13:06,415 copying biorefineries/corn/README.md -> build/lib/biorefineries/corn 2025-05-30T19:13:06,418 copying biorefineries/corn/biorefinery.py -> build/lib/biorefineries/corn 2025-05-30T19:13:06,421 creating build/lib/biorefineries/lactic 2025-05-30T19:13:06,422 copying biorefineries/lactic/README.rst -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,425 copying biorefineries/lactic/_tea.py -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,428 copying biorefineries/lactic/systems.py -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,431 copying biorefineries/lactic/__init__.py -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,434 copying biorefineries/lactic/_chemicals.py -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,437 copying biorefineries/lactic/_process_settings.py -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,440 copying biorefineries/lactic/utils.py -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,443 copying biorefineries/lactic/_profile.py -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,445 copying biorefineries/lactic/_processes.py -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,449 copying biorefineries/lactic/models.py -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,452 copying biorefineries/lactic/_units.py -> build/lib/biorefineries/lactic 2025-05-30T19:13:06,458 creating build/lib/biorefineries/lactic/analyses 2025-05-30T19:13:06,459 copying biorefineries/lactic/analyses/2_fermentation_TRY.py -> build/lib/biorefineries/lactic/analyses 2025-05-30T19:13:06,462 copying biorefineries/lactic/analyses/1_uncertainties.py -> build/lib/biorefineries/lactic/analyses 2025-05-30T19:13:06,465 copying biorefineries/lactic/analyses/3_feedstock_carb-price.py -> build/lib/biorefineries/lactic/analyses 2025-05-30T19:13:06,468 creating build/lib/biorefineries/sugarcane 2025-05-30T19:13:06,469 copying biorefineries/sugarcane/README.rst -> build/lib/biorefineries/sugarcane 2025-05-30T19:13:06,472 copying biorefineries/sugarcane/_tea.py -> build/lib/biorefineries/sugarcane 2025-05-30T19:13:06,474 copying biorefineries/sugarcane/systems.py -> build/lib/biorefineries/sugarcane 2025-05-30T19:13:06,477 copying biorefineries/sugarcane/__init__.py -> build/lib/biorefineries/sugarcane 2025-05-30T19:13:06,479 copying biorefineries/sugarcane/_chemicals.py -> build/lib/biorefineries/sugarcane 2025-05-30T19:13:06,481 copying biorefineries/sugarcane/_process_settings.py -> build/lib/biorefineries/sugarcane 2025-05-30T19:13:06,484 copying biorefineries/sugarcane/model.py -> build/lib/biorefineries/sugarcane 2025-05-30T19:13:06,486 creating build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,487 copying biorefineries/fattyalcohols/README.rst -> build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,491 copying biorefineries/fattyalcohols/_tea.py -> build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,493 copying biorefineries/fattyalcohols/__init__.py -> build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,496 copying biorefineries/fattyalcohols/_fattyalcohol_production.py -> build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,499 copying biorefineries/fattyalcohols/_chemicals.py -> build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,502 copying biorefineries/fattyalcohols/_system.py -> build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,504 copying biorefineries/fattyalcohols/utils.py -> build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,507 copying biorefineries/fattyalcohols/_process_specifications.py -> build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,510 copying biorefineries/fattyalcohols/streams.yaml -> build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,512 copying biorefineries/fattyalcohols/chemicals.yaml -> build/lib/biorefineries/fattyalcohols 2025-05-30T19:13:06,515 creating build/lib/biorefineries/fattyalcohols/units 2025-05-30T19:13:06,516 copying biorefineries/fattyalcohols/units/slle_centrifuge.py -> build/lib/biorefineries/fattyalcohols/units 2025-05-30T19:13:06,519 copying biorefineries/fattyalcohols/units/__init__.py -> build/lib/biorefineries/fattyalcohols/units 2025-05-30T19:13:06,521 copying biorefineries/fattyalcohols/units/fatty_alcohol_bioreactor.py -> build/lib/biorefineries/fattyalcohols/units 2025-05-30T19:13:06,523 creating build/lib/biorefineries/LAOs 2025-05-30T19:13:06,525 copying biorefineries/LAOs/README.rst -> build/lib/biorefineries/LAOs 2025-05-30T19:13:06,527 copying biorefineries/LAOs/analysis.ipynb -> build/lib/biorefineries/LAOs 2025-05-30T19:13:06,594 copying biorefineries/LAOs/_tea.py -> build/lib/biorefineries/LAOs 2025-05-30T19:13:06,596 copying biorefineries/LAOs/__init__.py -> build/lib/biorefineries/LAOs 2025-05-30T19:13:06,598 copying biorefineries/LAOs/_chemicals.py -> build/lib/biorefineries/LAOs 2025-05-30T19:13:06,600 copying biorefineries/LAOs/_system.py -> build/lib/biorefineries/LAOs 2025-05-30T19:13:06,603 copying biorefineries/LAOs/utils.py -> build/lib/biorefineries/LAOs 2025-05-30T19:13:06,605 copying biorefineries/LAOs/_process_specifications.py -> build/lib/biorefineries/LAOs 2025-05-30T19:13:06,608 copying biorefineries/LAOs/streams.yaml -> build/lib/biorefineries/LAOs 2025-05-30T19:13:06,611 copying biorefineries/LAOs/chemicals.yaml -> build/lib/biorefineries/LAOs 2025-05-30T19:13:06,613 creating build/lib/biorefineries/LAOs/units 2025-05-30T19:13:06,614 copying biorefineries/LAOs/units/__init__.py -> build/lib/biorefineries/LAOs/units 2025-05-30T19:13:06,617 copying biorefineries/LAOs/units/nitrogen_generation_package.py -> build/lib/biorefineries/LAOs/units 2025-05-30T19:13:06,620 copying biorefineries/LAOs/units/adiabatic_fixedbed_gas_reactor.py -> build/lib/biorefineries/LAOs/units 2025-05-30T19:13:06,622 copying biorefineries/LAOs/units/surge_tank.py -> build/lib/biorefineries/LAOs/units 2025-05-30T19:13:06,625 creating build/lib/biorefineries/abm 2025-05-30T19:13:06,626 copying biorefineries/abm/breakdown.py -> build/lib/biorefineries/abm 2025-05-30T19:13:06,629 copying biorefineries/abm/cornstover.py -> build/lib/biorefineries/abm 2025-05-30T19:13:06,632 copying biorefineries/abm/abm_yield_example.py -> build/lib/biorefineries/abm 2025-05-30T19:13:06,635 copying biorefineries/abm/corn.py -> build/lib/biorefineries/abm 2025-05-30T19:13:06,637 creating build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,639 copying biorefineries/gas_fermentation/systems.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,642 copying biorefineries/gas_fermentation/__init__.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,645 copying biorefineries/gas_fermentation/data.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,647 copying biorefineries/gas_fermentation/uncertainty.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,651 copying biorefineries/gas_fermentation/process_settings.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,654 copying biorefineries/gas_fermentation/property_package.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,657 copying biorefineries/gas_fermentation/units.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,660 copying biorefineries/gas_fermentation/tables.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,662 copying biorefineries/gas_fermentation/README.md -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,665 copying biorefineries/gas_fermentation/plots.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,668 copying biorefineries/gas_fermentation/back_of_the_envelope_calculations.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,671 copying biorefineries/gas_fermentation/tests.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,674 copying biorefineries/gas_fermentation/biorefinery.py -> build/lib/biorefineries/gas_fermentation 2025-05-30T19:13:06,677 creating build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,678 copying biorefineries/gas_fermentation/images/impact_of_length_to_diameter.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,691 copying biorefineries/gas_fermentation/images/oleochemical_yield_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,696 copying biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,705 copying biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,708 copying biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,721 copying biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,728 copying biorefineries/gas_fermentation/images/oleochemical_yield_price_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,732 copying biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,736 copying biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,745 copying biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,748 copying biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,758 copying biorefineries/gas_fermentation/images/oleochemical_yield_titer_substrate_contours.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,778 copying biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,789 copying biorefineries/gas_fermentation/images/uncertainty.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,793 copying biorefineries/gas_fermentation/images/impact.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,797 copying biorefineries/gas_fermentation/images/spearman.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,808 copying biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,814 copying biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,818 copying biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,832 copying biorefineries/gas_fermentation/images/configuration_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,848 copying biorefineries/gas_fermentation/images/impact.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,852 copying biorefineries/gas_fermentation/images/preliminary_flowsheet.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,856 copying biorefineries/gas_fermentation/images/MSP_CI_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,912 copying biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,921 copying biorefineries/gas_fermentation/images/preliminary_contour.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,924 copying biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,935 copying biorefineries/gas_fermentation/images/oleochemical_yield_contours.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,955 copying biorefineries/gas_fermentation/images/impact_of_length_to_diameter.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,960 copying biorefineries/gas_fermentation/images/montecarlo_absolute.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,966 copying biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,974 copying biorefineries/gas_fermentation/images/kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,982 copying biorefineries/gas_fermentation/images/AcOH_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,985 copying biorefineries/gas_fermentation/images/preliminary_flowsheet_with_auxiliaries.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,989 copying biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,993 copying biorefineries/gas_fermentation/images/oleochemical_yield_titer_substrate_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:06,999 copying biorefineries/gas_fermentation/images/sensitivity.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,003 copying biorefineries/gas_fermentation/images/kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,012 copying biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,017 copying biorefineries/gas_fermentation/images/H2_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,021 copying biorefineries/gas_fermentation/images/montecarlo_absolute.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,028 copying biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,037 copying biorefineries/gas_fermentation/images/MSP_CI_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,048 copying biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,061 copying biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,072 copying biorefineries/gas_fermentation/images/AcEster_contours.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,077 copying biorefineries/gas_fermentation/images/sensitivity.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,081 copying biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,091 copying biorefineries/gas_fermentation/images/spearman.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,095 copying biorefineries/gas_fermentation/images/oleochemical_yield_price_contours.png -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,111 copying biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,115 copying biorefineries/gas_fermentation/images/configuration_kde.svg -> build/lib/biorefineries/gas_fermentation/images 2025-05-30T19:13:07,125 creating build/lib/biorefineries/gas_fermentation/results 2025-05-30T19:13:07,126 copying biorefineries/gas_fermentation/results/all-acetate growth_spearman.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-05-30T19:13:07,129 copying biorefineries/gas_fermentation/results/all-glucose growth_monte_carlo.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-05-30T19:13:07,185 copying biorefineries/gas_fermentation/results/all-glucose growth_10000 -> build/lib/biorefineries/gas_fermentation/results 2025-05-30T19:13:07,217 copying biorefineries/gas_fermentation/results/all-glucose growth_spearman.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-05-30T19:13:07,219 copying biorefineries/gas_fermentation/results/all-acetate growth_10000 -> build/lib/biorefineries/gas_fermentation/results 2025-05-30T19:13:07,254 copying biorefineries/gas_fermentation/results/all-acetate growth_monte_carlo.xlsx -> build/lib/biorefineries/gas_fermentation/results 2025-05-30T19:13:07,310 creating build/lib/biorefineries/gas_fermentation/notebooks 2025-05-30T19:13:07,311 copying biorefineries/gas_fermentation/notebooks/arpa_e_project.py -> build/lib/biorefineries/gas_fermentation/notebooks 2025-05-30T19:13:07,314 creating build/lib/biorefineries/tests 2025-05-30T19:13:07,315 copying biorefineries/tests/test_biorefineries.py -> build/lib/biorefineries/tests 2025-05-30T19:13:07,319 copying biorefineries/tests/__init__.py -> build/lib/biorefineries/tests 2025-05-30T19:13:07,321 copying biorefineries/tests/run_readmes.py -> build/lib/biorefineries/tests 2025-05-30T19:13:07,355 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-05-30T19:13:07,356 !! 2025-05-30T19:13:07,357 ******************************************************************************** 2025-05-30T19:13:07,358 Please avoid running ``setup.py`` directly. 2025-05-30T19:13:07,358 Instead, use pypa/build, pypa/installer or other 2025-05-30T19:13:07,359 standards-based tools. 2025-05-30T19:13:07,360 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-05-30T19:13:07,361 or your builds will no longer be supported. 2025-05-30T19:13:07,362 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-05-30T19:13:07,362 ******************************************************************************** 2025-05-30T19:13:07,363 !! 2025-05-30T19:13:07,364 self.initialize_options() 2025-05-30T19:13:07,385 installing to build/bdist.linux-armv7l/wheel 2025-05-30T19:13:07,386 running install 2025-05-30T19:13:07,410 running install_lib 2025-05-30T19:13:07,438 creating build/bdist.linux-armv7l/wheel 2025-05-30T19:13:07,441 creating build/bdist.linux-armv7l/wheel/biorefineries 2025-05-30T19:13:07,442 creating build/bdist.linux-armv7l/wheel/biorefineries/corn 2025-05-30T19:13:07,444 copying build/lib/biorefineries/corn/tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-05-30T19:13:07,446 copying build/lib/biorefineries/corn/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-05-30T19:13:07,449 copying build/lib/biorefineries/corn/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-05-30T19:13:07,451 copying build/lib/biorefineries/corn/process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-05-30T19:13:07,453 copying build/lib/biorefineries/corn/chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-05-30T19:13:07,455 copying build/lib/biorefineries/corn/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-05-30T19:13:07,457 copying build/lib/biorefineries/corn/utils.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-05-30T19:13:07,459 copying build/lib/biorefineries/corn/README.md -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-05-30T19:13:07,462 copying build/lib/biorefineries/corn/biorefinery.py -> build/bdist.linux-armv7l/wheel/./biorefineries/corn 2025-05-30T19:13:07,465 creating build/bdist.linux-armv7l/wheel/biorefineries/milk 2025-05-30T19:13:07,466 creating build/bdist.linux-armv7l/wheel/biorefineries/milk/results 2025-05-30T19:13:07,468 copying build/lib/biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate_GlucoseMedia.npy -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/results 2025-05-30T19:13:07,470 copying build/lib/biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_GlucoseMedia.npy -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/results 2025-05-30T19:13:07,473 copying build/lib/biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate.npy -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/results 2025-05-30T19:13:07,476 copying build/lib/biorefineries/milk/GalactoOligoSaccharideProcess.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,545 copying build/lib/biorefineries/milk/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,547 copying build/lib/biorefineries/milk/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,549 copying build/lib/biorefineries/milk/data.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,551 copying build/lib/biorefineries/milk/uncertainty.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,553 copying build/lib/biorefineries/milk/process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,555 copying build/lib/biorefineries/milk/chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,559 creating build/bdist.linux-armv7l/wheel/biorefineries/milk/images 2025-05-30T19:13:07,560 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.png -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-05-30T19:13:07,569 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-05-30T19:13:07,574 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-05-30T19:13:07,580 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-05-30T19:13:07,586 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.png -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-05-30T19:13:07,597 copying build/lib/biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.png -> build/bdist.linux-armv7l/wheel/./biorefineries/milk/images 2025-05-30T19:13:07,608 copying build/lib/biorefineries/milk/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,610 copying build/lib/biorefineries/milk/README.md -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,611 copying build/lib/biorefineries/milk/plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,613 copying build/lib/biorefineries/milk/tests.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,615 copying build/lib/biorefineries/milk/biorefinery.py -> build/bdist.linux-armv7l/wheel/./biorefineries/milk 2025-05-30T19:13:07,618 creating build/bdist.linux-armv7l/wheel/biorefineries/tests 2025-05-30T19:13:07,620 copying build/lib/biorefineries/tests/test_biorefineries.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tests 2025-05-30T19:13:07,622 copying build/lib/biorefineries/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tests 2025-05-30T19:13:07,624 copying build/lib/biorefineries/tests/run_readmes.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tests 2025-05-30T19:13:07,626 creating build/bdist.linux-armv7l/wheel/biorefineries/ethanol 2025-05-30T19:13:07,627 copying build/lib/biorefineries/ethanol/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/ethanol 2025-05-30T19:13:07,630 copying build/lib/biorefineries/ethanol/streams.py -> build/bdist.linux-armv7l/wheel/./biorefineries/ethanol 2025-05-30T19:13:07,632 copying build/lib/biorefineries/ethanol/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/ethanol 2025-05-30T19:13:07,635 creating build/bdist.linux-armv7l/wheel/biorefineries/oilcane 2025-05-30T19:13:07,636 copying build/lib/biorefineries/oilcane/_evaluation.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,639 copying build/lib/biorefineries/oilcane/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,641 copying build/lib/biorefineries/oilcane/_uncertainty_plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,645 copying build/lib/biorefineries/oilcane/sankey_energy.ipynb -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,818 copying build/lib/biorefineries/oilcane/sankey_plot.ipynb -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,822 copying build/lib/biorefineries/oilcane/_contour_plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,825 copying build/lib/biorefineries/oilcane/_tables.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,828 copying build/lib/biorefineries/oilcane/_parse_configuration.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,830 copying build/lib/biorefineries/oilcane/_feature_mockups.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,832 copying build/lib/biorefineries/oilcane/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,834 copying build/lib/biorefineries/oilcane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,836 copying build/lib/biorefineries/oilcane/_line_plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,838 copying build/lib/biorefineries/oilcane/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,841 copying build/lib/biorefineries/oilcane/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,843 copying build/lib/biorefineries/oilcane/_load_data.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,846 copying build/lib/biorefineries/oilcane/utils.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,849 copying build/lib/biorefineries/oilcane/README.md -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,851 copying build/lib/biorefineries/oilcane/lca_benchmarks.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,854 copying build/lib/biorefineries/oilcane/webapp_model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/oilcane 2025-05-30T19:13:07,857 creating build/bdist.linux-armv7l/wheel/biorefineries/lactic 2025-05-30T19:13:07,858 copying build/lib/biorefineries/lactic/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,862 copying build/lib/biorefineries/lactic/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,865 creating build/bdist.linux-armv7l/wheel/biorefineries/lactic/analyses 2025-05-30T19:13:07,867 copying build/lib/biorefineries/lactic/analyses/2_fermentation_TRY.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic/analyses 2025-05-30T19:13:07,870 copying build/lib/biorefineries/lactic/analyses/1_uncertainties.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic/analyses 2025-05-30T19:13:07,873 copying build/lib/biorefineries/lactic/analyses/3_feedstock_carb-price.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic/analyses 2025-05-30T19:13:07,877 copying build/lib/biorefineries/lactic/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,880 copying build/lib/biorefineries/lactic/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,883 copying build/lib/biorefineries/lactic/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,886 copying build/lib/biorefineries/lactic/_process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,889 copying build/lib/biorefineries/lactic/utils.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,891 copying build/lib/biorefineries/lactic/_profile.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,894 copying build/lib/biorefineries/lactic/_processes.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,897 copying build/lib/biorefineries/lactic/models.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,901 copying build/lib/biorefineries/lactic/_units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lactic 2025-05-30T19:13:07,905 copying build/lib/biorefineries/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries 2025-05-30T19:13:07,909 creating build/bdist.linux-armv7l/wheel/biorefineries/cornstover 2025-05-30T19:13:07,910 copying build/lib/biorefineries/cornstover/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,913 copying build/lib/biorefineries/cornstover/_switchgrass.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,916 copying build/lib/biorefineries/cornstover/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,918 copying build/lib/biorefineries/cornstover/_plot_single_point.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,921 copying build/lib/biorefineries/cornstover/_legacy_code.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,924 copying build/lib/biorefineries/cornstover/_plot_spearman.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,926 copying build/lib/biorefineries/cornstover/_plot_uncertainty.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,929 copying build/lib/biorefineries/cornstover/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,931 copying build/lib/biorefineries/cornstover/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,934 copying build/lib/biorefineries/cornstover/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,936 copying build/lib/biorefineries/cornstover/_analysis.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,938 copying build/lib/biorefineries/cornstover/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,940 copying build/lib/biorefineries/cornstover/_sankey.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,942 copying build/lib/biorefineries/cornstover/_process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,945 copying build/lib/biorefineries/cornstover/model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,947 copying build/lib/biorefineries/cornstover/webapp_model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,949 copying build/lib/biorefineries/cornstover/_plot_bars.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cornstover 2025-05-30T19:13:07,952 creating build/bdist.linux-armv7l/wheel/biorefineries/biodiesel 2025-05-30T19:13:07,954 creating build/bdist.linux-armv7l/wheel/biorefineries/biodiesel/units 2025-05-30T19:13:07,955 copying build/lib/biorefineries/biodiesel/units/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel/units 2025-05-30T19:13:07,958 copying build/lib/biorefineries/biodiesel/units/transesterification.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel/units 2025-05-30T19:13:07,961 copying build/lib/biorefineries/biodiesel/units/glycerolysis_reactor.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel/units 2025-05-30T19:13:07,963 copying build/lib/biorefineries/biodiesel/units/skimming_tank.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel/units 2025-05-30T19:13:07,965 copying build/lib/biorefineries/biodiesel/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel 2025-05-30T19:13:07,968 copying build/lib/biorefineries/biodiesel/streams.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel 2025-05-30T19:13:07,971 copying build/lib/biorefineries/biodiesel/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/biodiesel 2025-05-30T19:13:07,974 creating build/bdist.linux-armv7l/wheel/biorefineries/fattyalcohols 2025-05-30T19:13:07,975 copying build/lib/biorefineries/fattyalcohols/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-05-30T19:13:07,978 copying build/lib/biorefineries/fattyalcohols/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-05-30T19:13:07,981 creating build/bdist.linux-armv7l/wheel/biorefineries/fattyalcohols/units 2025-05-30T19:13:07,982 copying build/lib/biorefineries/fattyalcohols/units/slle_centrifuge.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols/units 2025-05-30T19:13:07,985 copying build/lib/biorefineries/fattyalcohols/units/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols/units 2025-05-30T19:13:07,987 copying build/lib/biorefineries/fattyalcohols/units/fatty_alcohol_bioreactor.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols/units 2025-05-30T19:13:07,989 copying build/lib/biorefineries/fattyalcohols/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-05-30T19:13:07,992 copying build/lib/biorefineries/fattyalcohols/_fattyalcohol_production.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-05-30T19:13:07,994 copying build/lib/biorefineries/fattyalcohols/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-05-30T19:13:07,997 copying build/lib/biorefineries/fattyalcohols/_system.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-05-30T19:13:07,999 copying build/lib/biorefineries/fattyalcohols/utils.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-05-30T19:13:08,001 copying build/lib/biorefineries/fattyalcohols/_process_specifications.py -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-05-30T19:13:08,004 copying build/lib/biorefineries/fattyalcohols/streams.yaml -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-05-30T19:13:08,006 copying build/lib/biorefineries/fattyalcohols/chemicals.yaml -> build/bdist.linux-armv7l/wheel/./biorefineries/fattyalcohols 2025-05-30T19:13:08,009 creating build/bdist.linux-armv7l/wheel/biorefineries/cellulosic 2025-05-30T19:13:08,011 creating build/bdist.linux-armv7l/wheel/biorefineries/cellulosic/systems 2025-05-30T19:13:08,012 copying build/lib/biorefineries/cellulosic/systems/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems 2025-05-30T19:13:08,015 creating build/bdist.linux-armv7l/wheel/biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:08,016 copying build/lib/biorefineries/cellulosic/systems/pretreatment/dilute_acid.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:08,019 copying build/lib/biorefineries/cellulosic/systems/pretreatment/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:08,021 copying build/lib/biorefineries/cellulosic/systems/pretreatment/alkaline.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:08,023 copying build/lib/biorefineries/cellulosic/systems/pretreatment/hot_water.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:08,025 copying build/lib/biorefineries/cellulosic/systems/pretreatment/ammonia_fiber_expansion.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/pretreatment 2025-05-30T19:13:08,027 copying build/lib/biorefineries/cellulosic/systems/cellulosic_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems 2025-05-30T19:13:08,030 creating build/bdist.linux-armv7l/wheel/biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:08,031 copying build/lib/biorefineries/cellulosic/systems/fermentation/integrated_bioprocess.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:08,034 copying build/lib/biorefineries/cellulosic/systems/fermentation/cofermentation.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:08,036 copying build/lib/biorefineries/cellulosic/systems/fermentation/general_interface.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:08,039 copying build/lib/biorefineries/cellulosic/systems/fermentation/saccharification.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:08,042 copying build/lib/biorefineries/cellulosic/systems/fermentation/simultaneous_saccharification_cofermentation.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:08,044 copying build/lib/biorefineries/cellulosic/systems/fermentation/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic/systems/fermentation 2025-05-30T19:13:08,046 copying build/lib/biorefineries/cellulosic/streams.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-05-30T19:13:08,048 copying build/lib/biorefineries/cellulosic/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-05-30T19:13:08,050 copying build/lib/biorefineries/cellulosic/process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-05-30T19:13:08,053 copying build/lib/biorefineries/cellulosic/chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-05-30T19:13:08,055 copying build/lib/biorefineries/cellulosic/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-05-30T19:13:08,058 copying build/lib/biorefineries/cellulosic/biorefinery.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cellulosic 2025-05-30T19:13:08,062 creating build/bdist.linux-armv7l/wheel/biorefineries/LAOs 2025-05-30T19:13:08,063 copying build/lib/biorefineries/LAOs/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-05-30T19:13:08,065 copying build/lib/biorefineries/LAOs/analysis.ipynb -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-05-30T19:13:08,129 copying build/lib/biorefineries/LAOs/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-05-30T19:13:08,131 creating build/bdist.linux-armv7l/wheel/biorefineries/LAOs/units 2025-05-30T19:13:08,133 copying build/lib/biorefineries/LAOs/units/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs/units 2025-05-30T19:13:08,135 copying build/lib/biorefineries/LAOs/units/nitrogen_generation_package.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs/units 2025-05-30T19:13:08,138 copying build/lib/biorefineries/LAOs/units/adiabatic_fixedbed_gas_reactor.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs/units 2025-05-30T19:13:08,140 copying build/lib/biorefineries/LAOs/units/surge_tank.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs/units 2025-05-30T19:13:08,143 copying build/lib/biorefineries/LAOs/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-05-30T19:13:08,146 copying build/lib/biorefineries/LAOs/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-05-30T19:13:08,148 copying build/lib/biorefineries/LAOs/_system.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-05-30T19:13:08,152 copying build/lib/biorefineries/LAOs/utils.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-05-30T19:13:08,154 copying build/lib/biorefineries/LAOs/_process_specifications.py -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-05-30T19:13:08,157 copying build/lib/biorefineries/LAOs/streams.yaml -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-05-30T19:13:08,160 copying build/lib/biorefineries/LAOs/chemicals.yaml -> build/bdist.linux-armv7l/wheel/./biorefineries/LAOs 2025-05-30T19:13:08,164 creating build/bdist.linux-armv7l/wheel/biorefineries/sugarcane 2025-05-30T19:13:08,166 copying build/lib/biorefineries/sugarcane/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-05-30T19:13:08,168 copying build/lib/biorefineries/sugarcane/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-05-30T19:13:08,171 copying build/lib/biorefineries/sugarcane/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-05-30T19:13:08,173 copying build/lib/biorefineries/sugarcane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-05-30T19:13:08,175 copying build/lib/biorefineries/sugarcane/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-05-30T19:13:08,177 copying build/lib/biorefineries/sugarcane/_process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-05-30T19:13:08,180 copying build/lib/biorefineries/sugarcane/model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/sugarcane 2025-05-30T19:13:08,183 creating build/bdist.linux-armv7l/wheel/biorefineries/lipidcane 2025-05-30T19:13:08,185 copying build/lib/biorefineries/lipidcane/README.rst -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,188 copying build/lib/biorefineries/lipidcane/_webapp_model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,190 copying build/lib/biorefineries/lipidcane/_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,193 copying build/lib/biorefineries/lipidcane/_plot_spearman.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,196 copying build/lib/biorefineries/lipidcane/sankey_plot.ipynb -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,259 copying build/lib/biorefineries/lipidcane/_plot_uncertainty.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,262 copying build/lib/biorefineries/lipidcane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,264 copying build/lib/biorefineries/lipidcane/_feedstock_analysis.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,266 copying build/lib/biorefineries/lipidcane/_chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,268 copying build/lib/biorefineries/lipidcane/_system.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,270 copying build/lib/biorefineries/lipidcane/_analysis.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,272 copying build/lib/biorefineries/lipidcane/_process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,274 copying build/lib/biorefineries/lipidcane/model.py -> build/bdist.linux-armv7l/wheel/./biorefineries/lipidcane 2025-05-30T19:13:08,277 creating build/bdist.linux-armv7l/wheel/biorefineries/abm 2025-05-30T19:13:08,278 copying build/lib/biorefineries/abm/breakdown.py -> build/bdist.linux-armv7l/wheel/./biorefineries/abm 2025-05-30T19:13:08,280 copying build/lib/biorefineries/abm/cornstover.py -> build/bdist.linux-armv7l/wheel/./biorefineries/abm 2025-05-30T19:13:08,283 copying build/lib/biorefineries/abm/abm_yield_example.py -> build/bdist.linux-armv7l/wheel/./biorefineries/abm 2025-05-30T19:13:08,285 copying build/lib/biorefineries/abm/corn.py -> build/bdist.linux-armv7l/wheel/./biorefineries/abm 2025-05-30T19:13:08,288 creating build/bdist.linux-armv7l/wheel/biorefineries/tea 2025-05-30T19:13:08,289 copying build/lib/biorefineries/tea/conventional_ethanol_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tea 2025-05-30T19:13:08,291 copying build/lib/biorefineries/tea/cellulosic_ethanol_tea.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tea 2025-05-30T19:13:08,294 copying build/lib/biorefineries/tea/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/tea 2025-05-30T19:13:08,297 creating build/bdist.linux-armv7l/wheel/biorefineries/cane 2025-05-30T19:13:08,298 copying build/lib/biorefineries/cane/evaluation.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,302 copying build/lib/biorefineries/cane/composition.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,304 copying build/lib/biorefineries/cane/contour_plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,309 creating build/bdist.linux-armv7l/wheel/biorefineries/cane/systems 2025-05-30T19:13:08,310 copying build/lib/biorefineries/cane/systems/cellulosic_biodiesel_actag.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,313 copying build/lib/biorefineries/cane/systems/biodiesel.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,315 copying build/lib/biorefineries/cane/systems/biodiesel_actag.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,318 copying build/lib/biorefineries/cane/systems/fermentation.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,321 creating build/bdist.linux-armv7l/wheel/biorefineries/cane/systems/oilcane 2025-05-30T19:13:08,323 copying build/lib/biorefineries/cane/systems/oilcane/crude_oil_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/oilcane 2025-05-30T19:13:08,325 copying build/lib/biorefineries/cane/systems/oilcane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/oilcane 2025-05-30T19:13:08,328 copying build/lib/biorefineries/cane/systems/oilcane/cellulosic_crude_oil_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/oilcane 2025-05-30T19:13:08,330 copying build/lib/biorefineries/cane/systems/oilcane/cellulosic_biodiesel_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/oilcane 2025-05-30T19:13:08,332 copying build/lib/biorefineries/cane/systems/oilcane/biodiesel_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/oilcane 2025-05-30T19:13:08,335 copying build/lib/biorefineries/cane/systems/sugar.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,337 copying build/lib/biorefineries/cane/systems/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,339 copying build/lib/biorefineries/cane/systems/juicing.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,343 creating build/bdist.linux-armv7l/wheel/biorefineries/cane/systems/sugarcane 2025-05-30T19:13:08,344 copying build/lib/biorefineries/cane/systems/sugarcane/sugar_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/sugarcane 2025-05-30T19:13:08,347 copying build/lib/biorefineries/cane/systems/sugarcane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/sugarcane 2025-05-30T19:13:08,349 copying build/lib/biorefineries/cane/systems/sugarcane/ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/sugarcane 2025-05-30T19:13:08,352 copying build/lib/biorefineries/cane/systems/sugarcane/cellulosic_ethanol.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems/sugarcane 2025-05-30T19:13:08,354 copying build/lib/biorefineries/cane/systems/lipidcane.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,356 copying build/lib/biorefineries/cane/systems/bagasse.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,358 copying build/lib/biorefineries/cane/systems/lipid_extraction.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,361 copying build/lib/biorefineries/cane/systems/cellulosic_biodiesel.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,363 copying build/lib/biorefineries/cane/systems/pretreatment.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/systems 2025-05-30T19:13:08,365 copying build/lib/biorefineries/cane/results.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,368 copying build/lib/biorefineries/cane/feature_mockups.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,371 copying build/lib/biorefineries/cane/configurations_biomass_yield_analysis.npy -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,375 copying build/lib/biorefineries/cane/streams.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,377 copying build/lib/biorefineries/cane/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,380 creating build/bdist.linux-armv7l/wheel/biorefineries/cane/data 2025-05-30T19:13:08,381 copying build/lib/biorefineries/cane/data/microbial_oil_baseline.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-05-30T19:13:08,383 copying build/lib/biorefineries/cane/data/price_distributions_2022.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-05-30T19:13:08,386 copying build/lib/biorefineries/cane/data/RIN_prices_2022.csv -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-05-30T19:13:08,395 copying build/lib/biorefineries/cane/data/price_distributions_2023.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-05-30T19:13:08,397 copying build/lib/biorefineries/cane/data/lca_characterization_factors.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-05-30T19:13:08,400 copying build/lib/biorefineries/cane/data/cane_composition_data.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-05-30T19:13:08,403 copying build/lib/biorefineries/cane/data/cane_composition_data_full.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-05-30T19:13:08,406 copying build/lib/biorefineries/cane/data/RIN_prices_2023.csv -> build/bdist.linux-armv7l/wheel/./biorefineries/cane/data 2025-05-30T19:13:08,415 copying build/lib/biorefineries/cane/parse_configuration.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,419 copying build/lib/biorefineries/cane/oil_extraction.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,421 copying build/lib/biorefineries/cane/rename_soon.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,423 copying build/lib/biorefineries/cane/process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,425 copying build/lib/biorefineries/cane/chemicals.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,428 copying build/lib/biorefineries/cane/uncertainty_plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,433 copying build/lib/biorefineries/cane/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,436 copying build/lib/biorefineries/cane/tables.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,440 copying build/lib/biorefineries/cane/README.md -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,443 copying build/lib/biorefineries/cane/biorefinery.py -> build/bdist.linux-armv7l/wheel/./biorefineries/cane 2025-05-30T19:13:08,450 creating build/bdist.linux-armv7l/wheel/biorefineries/gas_fermentation 2025-05-30T19:13:08,452 creating build/bdist.linux-armv7l/wheel/biorefineries/gas_fermentation/results 2025-05-30T19:13:08,453 copying build/lib/biorefineries/gas_fermentation/results/all-acetate growth_spearman.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-05-30T19:13:08,456 copying build/lib/biorefineries/gas_fermentation/results/all-glucose growth_monte_carlo.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-05-30T19:13:08,599 copying build/lib/biorefineries/gas_fermentation/results/all-glucose growth_10000 -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-05-30T19:13:08,663 copying build/lib/biorefineries/gas_fermentation/results/all-glucose growth_spearman.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-05-30T19:13:08,666 copying build/lib/biorefineries/gas_fermentation/results/all-acetate growth_10000 -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-05-30T19:13:08,801 copying build/lib/biorefineries/gas_fermentation/results/all-acetate growth_monte_carlo.xlsx -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/results 2025-05-30T19:13:08,986 copying build/lib/biorefineries/gas_fermentation/systems.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:08,991 copying build/lib/biorefineries/gas_fermentation/__init__.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:08,993 copying build/lib/biorefineries/gas_fermentation/data.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:08,995 copying build/lib/biorefineries/gas_fermentation/uncertainty.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:08,999 copying build/lib/biorefineries/gas_fermentation/process_settings.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:09,001 copying build/lib/biorefineries/gas_fermentation/property_package.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:09,005 creating build/bdist.linux-armv7l/wheel/biorefineries/gas_fermentation/images 2025-05-30T19:13:09,006 copying build/lib/biorefineries/gas_fermentation/images/impact_of_length_to_diameter.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,031 copying build/lib/biorefineries/gas_fermentation/images/oleochemical_yield_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,035 copying build/lib/biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,060 copying build/lib/biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,063 copying build/lib/biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,073 copying build/lib/biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,121 copying build/lib/biorefineries/gas_fermentation/images/oleochemical_yield_price_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,133 copying build/lib/biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,140 copying build/lib/biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,160 copying build/lib/biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,165 copying build/lib/biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,190 copying build/lib/biorefineries/gas_fermentation/images/oleochemical_yield_titer_substrate_contours.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,213 copying build/lib/biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,236 copying build/lib/biorefineries/gas_fermentation/images/uncertainty.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,238 copying build/lib/biorefineries/gas_fermentation/images/impact.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,242 copying build/lib/biorefineries/gas_fermentation/images/spearman.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,250 copying build/lib/biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,255 copying build/lib/biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,258 copying build/lib/biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,265 copying build/lib/biorefineries/gas_fermentation/images/configuration_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,276 copying build/lib/biorefineries/gas_fermentation/images/impact.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,279 copying build/lib/biorefineries/gas_fermentation/images/preliminary_flowsheet.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,283 copying build/lib/biorefineries/gas_fermentation/images/MSP_CI_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,336 copying build/lib/biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,343 copying build/lib/biorefineries/gas_fermentation/images/preliminary_contour.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,346 copying build/lib/biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,356 copying build/lib/biorefineries/gas_fermentation/images/oleochemical_yield_contours.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,374 copying build/lib/biorefineries/gas_fermentation/images/impact_of_length_to_diameter.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,379 copying build/lib/biorefineries/gas_fermentation/images/montecarlo_absolute.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,385 copying build/lib/biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,395 copying build/lib/biorefineries/gas_fermentation/images/kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,403 copying build/lib/biorefineries/gas_fermentation/images/AcOH_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,408 copying build/lib/biorefineries/gas_fermentation/images/preliminary_flowsheet_with_auxiliaries.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,411 copying build/lib/biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,416 copying build/lib/biorefineries/gas_fermentation/images/oleochemical_yield_titer_substrate_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,422 copying build/lib/biorefineries/gas_fermentation/images/sensitivity.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,427 copying build/lib/biorefineries/gas_fermentation/images/kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,438 copying build/lib/biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,444 copying build/lib/biorefineries/gas_fermentation/images/H2_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,448 copying build/lib/biorefineries/gas_fermentation/images/montecarlo_absolute.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,455 copying build/lib/biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,463 copying build/lib/biorefineries/gas_fermentation/images/MSP_CI_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,478 copying build/lib/biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,491 copying build/lib/biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,502 copying build/lib/biorefineries/gas_fermentation/images/AcEster_contours.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,506 copying build/lib/biorefineries/gas_fermentation/images/sensitivity.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,510 copying build/lib/biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,521 copying build/lib/biorefineries/gas_fermentation/images/spearman.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,525 copying build/lib/biorefineries/gas_fermentation/images/oleochemical_yield_price_contours.png -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,541 copying build/lib/biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,545 copying build/lib/biorefineries/gas_fermentation/images/configuration_kde.svg -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/images 2025-05-30T19:13:09,553 copying build/lib/biorefineries/gas_fermentation/units.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:09,556 copying build/lib/biorefineries/gas_fermentation/tables.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:09,558 copying build/lib/biorefineries/gas_fermentation/README.md -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:09,560 copying build/lib/biorefineries/gas_fermentation/plots.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:09,562 copying build/lib/biorefineries/gas_fermentation/back_of_the_envelope_calculations.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:09,565 creating build/bdist.linux-armv7l/wheel/biorefineries/gas_fermentation/notebooks 2025-05-30T19:13:09,566 copying build/lib/biorefineries/gas_fermentation/notebooks/arpa_e_project.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation/notebooks 2025-05-30T19:13:09,569 copying build/lib/biorefineries/gas_fermentation/tests.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:09,571 copying build/lib/biorefineries/gas_fermentation/biorefinery.py -> build/bdist.linux-armv7l/wheel/./biorefineries/gas_fermentation 2025-05-30T19:13:09,574 running install_egg_info 2025-05-30T19:13:09,615 running egg_info 2025-05-30T19:13:09,642 writing biorefineries.egg-info/PKG-INFO 2025-05-30T19:13:09,645 writing dependency_links to biorefineries.egg-info/dependency_links.txt 2025-05-30T19:13:09,647 writing requirements to biorefineries.egg-info/requires.txt 2025-05-30T19:13:09,648 writing top-level names to biorefineries.egg-info/top_level.txt 2025-05-30T19:13:09,748 reading manifest file 'biorefineries.egg-info/SOURCES.txt' 2025-05-30T19:13:09,766 adding license file 'LICENSE.txt' 2025-05-30T19:13:09,782 writing manifest file 'biorefineries.egg-info/SOURCES.txt' 2025-05-30T19:13:09,784 Copying biorefineries.egg-info to build/bdist.linux-armv7l/wheel/./biorefineries-2.34.9-py3.11.egg-info 2025-05-30T19:13:09,794 running install_scripts 2025-05-30T19:13:09,805 creating build/bdist.linux-armv7l/wheel/biorefineries-2.34.9.dist-info/WHEEL 2025-05-30T19:13:09,808 creating '/tmp/pip-wheel-yfw6iqiw/biorefineries-2.34.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-05-30T19:13:09,810 adding 'biorefineries/__init__.py' 2025-05-30T19:13:09,813 adding 'biorefineries/LAOs/README.rst' 2025-05-30T19:13:09,815 adding 'biorefineries/LAOs/__init__.py' 2025-05-30T19:13:09,816 adding 'biorefineries/LAOs/_chemicals.py' 2025-05-30T19:13:09,819 adding 'biorefineries/LAOs/_process_specifications.py' 2025-05-30T19:13:09,821 adding 'biorefineries/LAOs/_system.py' 2025-05-30T19:13:09,822 adding 'biorefineries/LAOs/_tea.py' 2025-05-30T19:13:10,251 adding 'biorefineries/LAOs/analysis.ipynb' 2025-05-30T19:13:10,275 adding 'biorefineries/LAOs/chemicals.yaml' 2025-05-30T19:13:10,276 adding 'biorefineries/LAOs/streams.yaml' 2025-05-30T19:13:10,277 adding 'biorefineries/LAOs/utils.py' 2025-05-30T19:13:10,279 adding 'biorefineries/LAOs/units/__init__.py' 2025-05-30T19:13:10,281 adding 'biorefineries/LAOs/units/adiabatic_fixedbed_gas_reactor.py' 2025-05-30T19:13:10,282 adding 'biorefineries/LAOs/units/nitrogen_generation_package.py' 2025-05-30T19:13:10,283 adding 'biorefineries/LAOs/units/surge_tank.py' 2025-05-30T19:13:10,285 adding 'biorefineries/abm/abm_yield_example.py' 2025-05-30T19:13:10,286 adding 'biorefineries/abm/breakdown.py' 2025-05-30T19:13:10,288 adding 'biorefineries/abm/corn.py' 2025-05-30T19:13:10,289 adding 'biorefineries/abm/cornstover.py' 2025-05-30T19:13:10,291 adding 'biorefineries/biodiesel/__init__.py' 2025-05-30T19:13:10,292 adding 'biorefineries/biodiesel/streams.py' 2025-05-30T19:13:10,295 adding 'biorefineries/biodiesel/systems.py' 2025-05-30T19:13:10,297 adding 'biorefineries/biodiesel/units/__init__.py' 2025-05-30T19:13:10,298 adding 'biorefineries/biodiesel/units/glycerolysis_reactor.py' 2025-05-30T19:13:10,299 adding 'biorefineries/biodiesel/units/skimming_tank.py' 2025-05-30T19:13:10,301 adding 'biorefineries/biodiesel/units/transesterification.py' 2025-05-30T19:13:10,304 adding 'biorefineries/cane/README.md' 2025-05-30T19:13:10,305 adding 'biorefineries/cane/__init__.py' 2025-05-30T19:13:10,314 adding 'biorefineries/cane/biorefinery.py' 2025-05-30T19:13:10,316 adding 'biorefineries/cane/chemicals.py' 2025-05-30T19:13:10,319 adding 'biorefineries/cane/composition.py' 2025-05-30T19:13:10,324 adding 'biorefineries/cane/configurations_biomass_yield_analysis.npy' 2025-05-30T19:13:10,328 adding 'biorefineries/cane/contour_plots.py' 2025-05-30T19:13:10,331 adding 'biorefineries/cane/evaluation.py' 2025-05-30T19:13:10,333 adding 'biorefineries/cane/feature_mockups.py' 2025-05-30T19:13:10,335 adding 'biorefineries/cane/oil_extraction.py' 2025-05-30T19:13:10,336 adding 'biorefineries/cane/parse_configuration.py' 2025-05-30T19:13:10,337 adding 'biorefineries/cane/process_settings.py' 2025-05-30T19:13:10,338 adding 'biorefineries/cane/rename_soon.py' 2025-05-30T19:13:10,340 adding 'biorefineries/cane/results.py' 2025-05-30T19:13:10,342 adding 'biorefineries/cane/streams.py' 2025-05-30T19:13:10,343 adding 'biorefineries/cane/tables.py' 2025-05-30T19:13:10,351 adding 'biorefineries/cane/uncertainty_plots.py' 2025-05-30T19:13:10,353 adding 'biorefineries/cane/units.py' 2025-05-30T19:13:10,383 adding 'biorefineries/cane/data/RIN_prices_2022.csv' 2025-05-30T19:13:10,402 adding 'biorefineries/cane/data/RIN_prices_2023.csv' 2025-05-30T19:13:10,405 adding 'biorefineries/cane/data/cane_composition_data.xlsx' 2025-05-30T19:13:10,407 adding 'biorefineries/cane/data/cane_composition_data_full.xlsx' 2025-05-30T19:13:10,409 adding 'biorefineries/cane/data/lca_characterization_factors.py' 2025-05-30T19:13:10,410 adding 'biorefineries/cane/data/microbial_oil_baseline.py' 2025-05-30T19:13:10,412 adding 'biorefineries/cane/data/price_distributions_2022.py' 2025-05-30T19:13:10,414 adding 'biorefineries/cane/data/price_distributions_2023.py' 2025-05-30T19:13:10,416 adding 'biorefineries/cane/systems/__init__.py' 2025-05-30T19:13:10,417 adding 'biorefineries/cane/systems/bagasse.py' 2025-05-30T19:13:10,418 adding 'biorefineries/cane/systems/biodiesel.py' 2025-05-30T19:13:10,420 adding 'biorefineries/cane/systems/biodiesel_actag.py' 2025-05-30T19:13:10,422 adding 'biorefineries/cane/systems/cellulosic_biodiesel.py' 2025-05-30T19:13:10,423 adding 'biorefineries/cane/systems/cellulosic_biodiesel_actag.py' 2025-05-30T19:13:10,426 adding 'biorefineries/cane/systems/fermentation.py' 2025-05-30T19:13:10,428 adding 'biorefineries/cane/systems/juicing.py' 2025-05-30T19:13:10,430 adding 'biorefineries/cane/systems/lipid_extraction.py' 2025-05-30T19:13:10,432 adding 'biorefineries/cane/systems/lipidcane.py' 2025-05-30T19:13:10,433 adding 'biorefineries/cane/systems/pretreatment.py' 2025-05-30T19:13:10,435 adding 'biorefineries/cane/systems/sugar.py' 2025-05-30T19:13:10,437 adding 'biorefineries/cane/systems/oilcane/__init__.py' 2025-05-30T19:13:10,438 adding 'biorefineries/cane/systems/oilcane/biodiesel_ethanol.py' 2025-05-30T19:13:10,440 adding 'biorefineries/cane/systems/oilcane/cellulosic_biodiesel_ethanol.py' 2025-05-30T19:13:10,441 adding 'biorefineries/cane/systems/oilcane/cellulosic_crude_oil_ethanol.py' 2025-05-30T19:13:10,443 adding 'biorefineries/cane/systems/oilcane/crude_oil_ethanol.py' 2025-05-30T19:13:10,445 adding 'biorefineries/cane/systems/sugarcane/__init__.py' 2025-05-30T19:13:10,446 adding 'biorefineries/cane/systems/sugarcane/cellulosic_ethanol.py' 2025-05-30T19:13:10,448 adding 'biorefineries/cane/systems/sugarcane/ethanol.py' 2025-05-30T19:13:10,449 adding 'biorefineries/cane/systems/sugarcane/sugar_ethanol.py' 2025-05-30T19:13:10,451 adding 'biorefineries/cellulosic/__init__.py' 2025-05-30T19:13:10,453 adding 'biorefineries/cellulosic/biorefinery.py' 2025-05-30T19:13:10,455 adding 'biorefineries/cellulosic/chemicals.py' 2025-05-30T19:13:10,457 adding 'biorefineries/cellulosic/process_settings.py' 2025-05-30T19:13:10,458 adding 'biorefineries/cellulosic/streams.py' 2025-05-30T19:13:10,462 adding 'biorefineries/cellulosic/units.py' 2025-05-30T19:13:10,464 adding 'biorefineries/cellulosic/systems/__init__.py' 2025-05-30T19:13:10,466 adding 'biorefineries/cellulosic/systems/cellulosic_ethanol.py' 2025-05-30T19:13:10,468 adding 'biorefineries/cellulosic/systems/fermentation/__init__.py' 2025-05-30T19:13:10,469 adding 'biorefineries/cellulosic/systems/fermentation/cofermentation.py' 2025-05-30T19:13:10,472 adding 'biorefineries/cellulosic/systems/fermentation/general_interface.py' 2025-05-30T19:13:10,473 adding 'biorefineries/cellulosic/systems/fermentation/integrated_bioprocess.py' 2025-05-30T19:13:10,475 adding 'biorefineries/cellulosic/systems/fermentation/saccharification.py' 2025-05-30T19:13:10,477 adding 'biorefineries/cellulosic/systems/fermentation/simultaneous_saccharification_cofermentation.py' 2025-05-30T19:13:10,479 adding 'biorefineries/cellulosic/systems/pretreatment/__init__.py' 2025-05-30T19:13:10,480 adding 'biorefineries/cellulosic/systems/pretreatment/alkaline.py' 2025-05-30T19:13:10,482 adding 'biorefineries/cellulosic/systems/pretreatment/ammonia_fiber_expansion.py' 2025-05-30T19:13:10,483 adding 'biorefineries/cellulosic/systems/pretreatment/dilute_acid.py' 2025-05-30T19:13:10,485 adding 'biorefineries/cellulosic/systems/pretreatment/hot_water.py' 2025-05-30T19:13:10,487 adding 'biorefineries/corn/README.md' 2025-05-30T19:13:10,488 adding 'biorefineries/corn/__init__.py' 2025-05-30T19:13:10,490 adding 'biorefineries/corn/biorefinery.py' 2025-05-30T19:13:10,491 adding 'biorefineries/corn/chemicals.py' 2025-05-30T19:13:10,492 adding 'biorefineries/corn/process_settings.py' 2025-05-30T19:13:10,494 adding 'biorefineries/corn/systems.py' 2025-05-30T19:13:10,496 adding 'biorefineries/corn/tea.py' 2025-05-30T19:13:10,498 adding 'biorefineries/corn/units.py' 2025-05-30T19:13:10,499 adding 'biorefineries/corn/utils.py' 2025-05-30T19:13:10,502 adding 'biorefineries/cornstover/README.rst' 2025-05-30T19:13:10,503 adding 'biorefineries/cornstover/__init__.py' 2025-05-30T19:13:10,505 adding 'biorefineries/cornstover/_analysis.py' 2025-05-30T19:13:10,506 adding 'biorefineries/cornstover/_chemicals.py' 2025-05-30T19:13:10,508 adding 'biorefineries/cornstover/_legacy_code.py' 2025-05-30T19:13:10,509 adding 'biorefineries/cornstover/_plot_bars.py' 2025-05-30T19:13:10,511 adding 'biorefineries/cornstover/_plot_single_point.py' 2025-05-30T19:13:10,513 adding 'biorefineries/cornstover/_plot_spearman.py' 2025-05-30T19:13:10,515 adding 'biorefineries/cornstover/_plot_uncertainty.py' 2025-05-30T19:13:10,516 adding 'biorefineries/cornstover/_process_settings.py' 2025-05-30T19:13:10,517 adding 'biorefineries/cornstover/_sankey.py' 2025-05-30T19:13:10,519 adding 'biorefineries/cornstover/_switchgrass.py' 2025-05-30T19:13:10,520 adding 'biorefineries/cornstover/_tea.py' 2025-05-30T19:13:10,521 adding 'biorefineries/cornstover/model.py' 2025-05-30T19:13:10,523 adding 'biorefineries/cornstover/systems.py' 2025-05-30T19:13:10,524 adding 'biorefineries/cornstover/units.py' 2025-05-30T19:13:10,526 adding 'biorefineries/cornstover/webapp_model.py' 2025-05-30T19:13:10,528 adding 'biorefineries/ethanol/__init__.py' 2025-05-30T19:13:10,529 adding 'biorefineries/ethanol/streams.py' 2025-05-30T19:13:10,530 adding 'biorefineries/ethanol/systems.py' 2025-05-30T19:13:10,533 adding 'biorefineries/fattyalcohols/README.rst' 2025-05-30T19:13:10,534 adding 'biorefineries/fattyalcohols/__init__.py' 2025-05-30T19:13:10,535 adding 'biorefineries/fattyalcohols/_chemicals.py' 2025-05-30T19:13:10,537 adding 'biorefineries/fattyalcohols/_fattyalcohol_production.py' 2025-05-30T19:13:10,538 adding 'biorefineries/fattyalcohols/_process_specifications.py' 2025-05-30T19:13:10,540 adding 'biorefineries/fattyalcohols/_system.py' 2025-05-30T19:13:10,541 adding 'biorefineries/fattyalcohols/_tea.py' 2025-05-30T19:13:10,542 adding 'biorefineries/fattyalcohols/chemicals.yaml' 2025-05-30T19:13:10,544 adding 'biorefineries/fattyalcohols/streams.yaml' 2025-05-30T19:13:10,545 adding 'biorefineries/fattyalcohols/utils.py' 2025-05-30T19:13:10,547 adding 'biorefineries/fattyalcohols/units/__init__.py' 2025-05-30T19:13:10,548 adding 'biorefineries/fattyalcohols/units/fatty_alcohol_bioreactor.py' 2025-05-30T19:13:10,550 adding 'biorefineries/fattyalcohols/units/slle_centrifuge.py' 2025-05-30T19:13:10,552 adding 'biorefineries/gas_fermentation/README.md' 2025-05-30T19:13:10,553 adding 'biorefineries/gas_fermentation/__init__.py' 2025-05-30T19:13:10,554 adding 'biorefineries/gas_fermentation/back_of_the_envelope_calculations.py' 2025-05-30T19:13:10,558 adding 'biorefineries/gas_fermentation/biorefinery.py' 2025-05-30T19:13:10,559 adding 'biorefineries/gas_fermentation/data.py' 2025-05-30T19:13:10,562 adding 'biorefineries/gas_fermentation/plots.py' 2025-05-30T19:13:10,563 adding 'biorefineries/gas_fermentation/process_settings.py' 2025-05-30T19:13:10,565 adding 'biorefineries/gas_fermentation/property_package.py' 2025-05-30T19:13:10,569 adding 'biorefineries/gas_fermentation/systems.py' 2025-05-30T19:13:10,571 adding 'biorefineries/gas_fermentation/tables.py' 2025-05-30T19:13:10,572 adding 'biorefineries/gas_fermentation/tests.py' 2025-05-30T19:13:10,577 adding 'biorefineries/gas_fermentation/uncertainty.py' 2025-05-30T19:13:10,579 adding 'biorefineries/gas_fermentation/units.py' 2025-05-30T19:13:10,588 adding 'biorefineries/gas_fermentation/images/AcEster_contours.svg' 2025-05-30T19:13:10,596 adding 'biorefineries/gas_fermentation/images/AcOH_contours.svg' 2025-05-30T19:13:10,664 adding 'biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.png' 2025-05-30T19:13:10,676 adding 'biorefineries/gas_fermentation/images/AcOH_titer_AcEster_yield_contours.svg' 2025-05-30T19:13:10,681 adding 'biorefineries/gas_fermentation/images/H2_contours.svg' 2025-05-30T19:13:10,750 adding 'biorefineries/gas_fermentation/images/MSP_CI_kde.png' 2025-05-30T19:13:10,893 adding 'biorefineries/gas_fermentation/images/MSP_CI_kde.svg' 2025-05-30T19:13:10,944 adding 'biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.png' 2025-05-30T19:13:10,952 adding 'biorefineries/gas_fermentation/images/all fermentation-glucose growth_kde.svg' 2025-05-30T19:13:10,997 adding 'biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.png' 2025-05-30T19:13:11,019 adding 'biorefineries/gas_fermentation/images/carbon_capture_comparison_dewatering_kde.svg' 2025-05-30T19:13:11,067 adding 'biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.png' 2025-05-30T19:13:11,090 adding 'biorefineries/gas_fermentation/images/carbon_capture_comparison_no_dewatering_kde.svg' 2025-05-30T19:13:11,157 adding 'biorefineries/gas_fermentation/images/configuration_kde.png' 2025-05-30T19:13:11,178 adding 'biorefineries/gas_fermentation/images/configuration_kde.svg' 2025-05-30T19:13:11,233 adding 'biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.png' 2025-05-30T19:13:11,260 adding 'biorefineries/gas_fermentation/images/dewatering_comparison_cc_kde.svg' 2025-05-30T19:13:11,337 adding 'biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.png' 2025-05-30T19:13:11,361 adding 'biorefineries/gas_fermentation/images/dewatering_comparison_no_cc_kde.svg' 2025-05-30T19:13:11,370 adding 'biorefineries/gas_fermentation/images/impact.png' 2025-05-30T19:13:11,378 adding 'biorefineries/gas_fermentation/images/impact.svg' 2025-05-30T19:13:11,452 adding 'biorefineries/gas_fermentation/images/impact_of_length_to_diameter.png' 2025-05-30T19:13:11,465 adding 'biorefineries/gas_fermentation/images/impact_of_length_to_diameter.svg' 2025-05-30T19:13:11,502 adding 'biorefineries/gas_fermentation/images/kde.png' 2025-05-30T19:13:11,522 adding 'biorefineries/gas_fermentation/images/kde.svg' 2025-05-30T19:13:11,545 adding 'biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.png' 2025-05-30T19:13:11,549 adding 'biorefineries/gas_fermentation/images/monte_carlo_across_H2_price.svg' 2025-05-30T19:13:11,595 adding 'biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.png' 2025-05-30T19:13:11,601 adding 'biorefineries/gas_fermentation/images/monte_carlo_across_bioreactor_yield.svg' 2025-05-30T19:13:11,627 adding 'biorefineries/gas_fermentation/images/montecarlo_absolute.png' 2025-05-30T19:13:11,645 adding 'biorefineries/gas_fermentation/images/montecarlo_absolute.svg' 2025-05-30T19:13:11,755 adding 'biorefineries/gas_fermentation/images/oleochemical_yield_contours.png' 2025-05-30T19:13:11,769 adding 'biorefineries/gas_fermentation/images/oleochemical_yield_contours.svg' 2025-05-30T19:13:11,868 adding 'biorefineries/gas_fermentation/images/oleochemical_yield_price_contours.png' 2025-05-30T19:13:11,881 adding 'biorefineries/gas_fermentation/images/oleochemical_yield_price_contours.svg' 2025-05-30T19:13:11,968 adding 'biorefineries/gas_fermentation/images/oleochemical_yield_titer_substrate_contours.png' 2025-05-30T19:13:11,983 adding 'biorefineries/gas_fermentation/images/oleochemical_yield_titer_substrate_contours.svg' 2025-05-30T19:13:11,989 adding 'biorefineries/gas_fermentation/images/preliminary_contour.png' 2025-05-30T19:13:11,992 adding 'biorefineries/gas_fermentation/images/preliminary_flowsheet.svg' 2025-05-30T19:13:11,996 adding 'biorefineries/gas_fermentation/images/preliminary_flowsheet_with_auxiliaries.svg' 2025-05-30T19:13:12,003 adding 'biorefineries/gas_fermentation/images/sensitivity.png' 2025-05-30T19:13:12,012 adding 'biorefineries/gas_fermentation/images/sensitivity.svg' 2025-05-30T19:13:12,050 adding 'biorefineries/gas_fermentation/images/spearman.png' 2025-05-30T19:13:12,059 adding 'biorefineries/gas_fermentation/images/spearman.svg' 2025-05-30T19:13:12,105 adding 'biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.png' 2025-05-30T19:13:12,114 adding 'biorefineries/gas_fermentation/images/spearman_all fermentation-acetate growth.svg' 2025-05-30T19:13:12,144 adding 'biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.png' 2025-05-30T19:13:12,153 adding 'biorefineries/gas_fermentation/images/spearman_all_scenarios_LCA.svg' 2025-05-30T19:13:12,190 adding 'biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.png' 2025-05-30T19:13:12,199 adding 'biorefineries/gas_fermentation/images/spearman_all_scenarios_TEA.svg' 2025-05-30T19:13:12,203 adding 'biorefineries/gas_fermentation/images/uncertainty.png' 2025-05-30T19:13:12,206 adding 'biorefineries/gas_fermentation/notebooks/arpa_e_project.py' 2025-05-30T19:13:12,389 adding 'biorefineries/gas_fermentation/results/all-acetate growth_10000' 2025-05-30T19:13:12,805 adding 'biorefineries/gas_fermentation/results/all-acetate growth_monte_carlo.xlsx' 2025-05-30T19:13:12,827 adding 'biorefineries/gas_fermentation/results/all-acetate growth_spearman.xlsx' 2025-05-30T19:13:12,999 adding 'biorefineries/gas_fermentation/results/all-glucose growth_10000' 2025-05-30T19:13:13,463 adding 'biorefineries/gas_fermentation/results/all-glucose growth_monte_carlo.xlsx' 2025-05-30T19:13:13,484 adding 'biorefineries/gas_fermentation/results/all-glucose growth_spearman.xlsx' 2025-05-30T19:13:13,487 adding 'biorefineries/lactic/README.rst' 2025-05-30T19:13:13,489 adding 'biorefineries/lactic/__init__.py' 2025-05-30T19:13:13,492 adding 'biorefineries/lactic/_chemicals.py' 2025-05-30T19:13:13,494 adding 'biorefineries/lactic/_process_settings.py' 2025-05-30T19:13:13,498 adding 'biorefineries/lactic/_processes.py' 2025-05-30T19:13:13,500 adding 'biorefineries/lactic/_profile.py' 2025-05-30T19:13:13,501 adding 'biorefineries/lactic/_tea.py' 2025-05-30T19:13:13,508 adding 'biorefineries/lactic/_units.py' 2025-05-30T19:13:13,511 adding 'biorefineries/lactic/models.py' 2025-05-30T19:13:13,513 adding 'biorefineries/lactic/systems.py' 2025-05-30T19:13:13,515 adding 'biorefineries/lactic/utils.py' 2025-05-30T19:13:13,517 adding 'biorefineries/lactic/analyses/1_uncertainties.py' 2025-05-30T19:13:13,519 adding 'biorefineries/lactic/analyses/2_fermentation_TRY.py' 2025-05-30T19:13:13,521 adding 'biorefineries/lactic/analyses/3_feedstock_carb-price.py' 2025-05-30T19:13:13,523 adding 'biorefineries/lipidcane/README.rst' 2025-05-30T19:13:13,524 adding 'biorefineries/lipidcane/__init__.py' 2025-05-30T19:13:13,526 adding 'biorefineries/lipidcane/_analysis.py' 2025-05-30T19:13:13,527 adding 'biorefineries/lipidcane/_chemicals.py' 2025-05-30T19:13:13,528 adding 'biorefineries/lipidcane/_feedstock_analysis.py' 2025-05-30T19:13:13,529 adding 'biorefineries/lipidcane/_plot_spearman.py' 2025-05-30T19:13:13,531 adding 'biorefineries/lipidcane/_plot_uncertainty.py' 2025-05-30T19:13:13,532 adding 'biorefineries/lipidcane/_process_settings.py' 2025-05-30T19:13:13,533 adding 'biorefineries/lipidcane/_system.py' 2025-05-30T19:13:13,535 adding 'biorefineries/lipidcane/_tea.py' 2025-05-30T19:13:13,536 adding 'biorefineries/lipidcane/_webapp_model.py' 2025-05-30T19:13:13,538 adding 'biorefineries/lipidcane/model.py' 2025-05-30T19:13:13,963 adding 'biorefineries/lipidcane/sankey_plot.ipynb' 2025-05-30T19:13:14,163 adding 'biorefineries/milk/GalactoOligoSaccharideProcess.xlsx' 2025-05-30T19:13:14,174 adding 'biorefineries/milk/README.md' 2025-05-30T19:13:14,175 adding 'biorefineries/milk/__init__.py' 2025-05-30T19:13:14,177 adding 'biorefineries/milk/biorefinery.py' 2025-05-30T19:13:14,179 adding 'biorefineries/milk/chemicals.py' 2025-05-30T19:13:14,180 adding 'biorefineries/milk/data.py' 2025-05-30T19:13:14,181 adding 'biorefineries/milk/plots.py' 2025-05-30T19:13:14,182 adding 'biorefineries/milk/process_settings.py' 2025-05-30T19:13:14,184 adding 'biorefineries/milk/systems.py' 2025-05-30T19:13:14,185 adding 'biorefineries/milk/tests.py' 2025-05-30T19:13:14,189 adding 'biorefineries/milk/uncertainty.py' 2025-05-30T19:13:14,190 adding 'biorefineries/milk/units.py' 2025-05-30T19:13:14,238 adding 'biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.png' 2025-05-30T19:13:14,247 adding 'biorefineries/milk/images/MSP_across_yield_productivity_GlucoseMedia.svg' 2025-05-30T19:13:14,291 adding 'biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.png' 2025-05-30T19:13:14,300 adding 'biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate.svg' 2025-05-30T19:13:14,362 adding 'biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.png' 2025-05-30T19:13:14,373 adding 'biorefineries/milk/images/MSP_across_yield_productivity_UFPermeate_GlucoseMedia.svg' 2025-05-30T19:13:14,376 adding 'biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_GlucoseMedia.npy' 2025-05-30T19:13:14,377 adding 'biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate.npy' 2025-05-30T19:13:14,379 adding 'biorefineries/milk/results/MSP_GWP_titer_productivity_AcEster_UFPermeate_GlucoseMedia.npy' 2025-05-30T19:13:14,382 adding 'biorefineries/oilcane/README.md' 2025-05-30T19:13:14,383 adding 'biorefineries/oilcane/__init__.py' 2025-05-30T19:13:14,384 adding 'biorefineries/oilcane/_chemicals.py' 2025-05-30T19:13:14,387 adding 'biorefineries/oilcane/_contour_plots.py' 2025-05-30T19:13:14,389 adding 'biorefineries/oilcane/_evaluation.py' 2025-05-30T19:13:14,390 adding 'biorefineries/oilcane/_feature_mockups.py' 2025-05-30T19:13:14,391 adding 'biorefineries/oilcane/_line_plots.py' 2025-05-30T19:13:14,393 adding 'biorefineries/oilcane/_load_data.py' 2025-05-30T19:13:14,395 adding 'biorefineries/oilcane/_parse_configuration.py' 2025-05-30T19:13:14,396 adding 'biorefineries/oilcane/_tables.py' 2025-05-30T19:13:14,398 adding 'biorefineries/oilcane/_tea.py' 2025-05-30T19:13:14,404 adding 'biorefineries/oilcane/_uncertainty_plots.py' 2025-05-30T19:13:14,406 adding 'biorefineries/oilcane/lca_benchmarks.py' 2025-05-30T19:13:14,871 adding 'biorefineries/oilcane/sankey_energy.ipynb' 2025-05-30T19:13:14,899 adding 'biorefineries/oilcane/sankey_plot.ipynb' 2025-05-30T19:13:14,901 adding 'biorefineries/oilcane/systems.py' 2025-05-30T19:13:14,903 adding 'biorefineries/oilcane/units.py' 2025-05-30T19:13:14,905 adding 'biorefineries/oilcane/utils.py' 2025-05-30T19:13:14,907 adding 'biorefineries/oilcane/webapp_model.py' 2025-05-30T19:13:14,909 adding 'biorefineries/sugarcane/README.rst' 2025-05-30T19:13:14,910 adding 'biorefineries/sugarcane/__init__.py' 2025-05-30T19:13:14,912 adding 'biorefineries/sugarcane/_chemicals.py' 2025-05-30T19:13:14,913 adding 'biorefineries/sugarcane/_process_settings.py' 2025-05-30T19:13:14,915 adding 'biorefineries/sugarcane/_tea.py' 2025-05-30T19:13:14,916 adding 'biorefineries/sugarcane/model.py' 2025-05-30T19:13:14,918 adding 'biorefineries/sugarcane/systems.py' 2025-05-30T19:13:14,920 adding 'biorefineries/tea/__init__.py' 2025-05-30T19:13:14,922 adding 'biorefineries/tea/cellulosic_ethanol_tea.py' 2025-05-30T19:13:14,924 adding 'biorefineries/tea/conventional_ethanol_tea.py' 2025-05-30T19:13:14,926 adding 'biorefineries/tests/__init__.py' 2025-05-30T19:13:14,928 adding 'biorefineries/tests/run_readmes.py' 2025-05-30T19:13:14,931 adding 'biorefineries/tests/test_biorefineries.py' 2025-05-30T19:13:14,934 adding 'biorefineries-2.34.9.dist-info/licenses/LICENSE.txt' 2025-05-30T19:13:14,936 adding 'biorefineries-2.34.9.dist-info/METADATA' 2025-05-30T19:13:14,937 adding 'biorefineries-2.34.9.dist-info/WHEEL' 2025-05-30T19:13:14,938 adding 'biorefineries-2.34.9.dist-info/top_level.txt' 2025-05-30T19:13:14,944 adding 'biorefineries-2.34.9.dist-info/RECORD' 2025-05-30T19:13:15,175 removing build/bdist.linux-armv7l/wheel 2025-05-30T19:13:15,384 Building wheel for biorefineries (setup.py): finished with status 'done' 2025-05-30T19:13:15,937 Created wheel for biorefineries: filename=biorefineries-2.34.9-py3-none-any.whl size=22230708 sha256=d2fd4183e844c96d738c08c6ad817d1a3cc689c9dbb776e8d69b119887692188 2025-05-30T19:13:15,939 Stored in directory: /tmp/pip-ephem-wheel-cache-6h5xjr4l/wheels/00/90/e5/65e26c78c8241ad586cd4ab70a29b3f9378a923df680477d5b 2025-05-30T19:13:15,970 Successfully built biorefineries 2025-05-30T19:13:16,508 Removed build tracker: '/tmp/pip-build-tracker-wnf4zddw'