2025-06-01T20:36:19,465 Created temporary directory: /tmp/pip-build-tracker-5opj5q7n 2025-06-01T20:36:19,466 Initialized build tracking at /tmp/pip-build-tracker-5opj5q7n 2025-06-01T20:36:19,467 Created build tracker: /tmp/pip-build-tracker-5opj5q7n 2025-06-01T20:36:19,467 Entered build tracker: /tmp/pip-build-tracker-5opj5q7n 2025-06-01T20:36:19,468 Created temporary directory: /tmp/pip-wheel-7b1ijq_n 2025-06-01T20:36:19,472 Created temporary directory: /tmp/pip-ephem-wheel-cache-cb6s_1xd 2025-06-01T20:36:19,529 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-06-01T20:36:19,531 2 location(s) to search for versions of morphomatics: 2025-06-01T20:36:19,531 * https://pypi.org/simple/morphomatics/ 2025-06-01T20:36:19,531 * https://www.piwheels.org/simple/morphomatics/ 2025-06-01T20:36:19,532 Fetching project page and analyzing links: https://pypi.org/simple/morphomatics/ 2025-06-01T20:36:19,533 Getting page https://pypi.org/simple/morphomatics/ 2025-06-01T20:36:19,535 Found index url https://pypi.org/simple/ 2025-06-01T20:36:19,761 Fetched page https://pypi.org/simple/morphomatics/ as application/vnd.pypi.simple.v1+json 2025-06-01T20:36:19,765 Skipping link: No binaries permitted for morphomatics: https://files.pythonhosted.org/packages/68/e3/69076bb3465281e4a84027b73a4b6f243cf2e26ed1637d40536a976b2836/morphomatics-4.0-py3-none-any.whl (from https://pypi.org/simple/morphomatics/) 2025-06-01T20:36:19,766 Found link https://files.pythonhosted.org/packages/66/48/d07ab63086ebd0a2654de1b4d746b650f3041443f6f276768c3cc74c7403/morphomatics-4.0.tar.gz (from https://pypi.org/simple/morphomatics/), version: 4.0 2025-06-01T20:36:19,767 Skipping link: No binaries permitted for morphomatics: https://files.pythonhosted.org/packages/07/b9/9c2a0f675c5928fefd2f6344532858c2518b2a52c10a0cf01459f79c9f16/morphomatics-4.1.1-py3-none-any.whl (from https://pypi.org/simple/morphomatics/) 2025-06-01T20:36:19,768 Found link https://files.pythonhosted.org/packages/4e/3f/a253c08a0927615df880e8aeac6b9f2b11a0fc817772537e03f24861cfe0/morphomatics-4.1.1.tar.gz (from https://pypi.org/simple/morphomatics/), version: 4.1.1 2025-06-01T20:36:19,769 Skipping link: No binaries permitted for morphomatics: https://files.pythonhosted.org/packages/dc/00/403f59a3f4624a65ab2c894da463e739c4fbd39b2bd2e4d630a3d0486e2e/morphomatics-4.1.2-py3-none-any.whl (from https://pypi.org/simple/morphomatics/) 2025-06-01T20:36:19,771 Found link https://files.pythonhosted.org/packages/78/ce/1dbdae368f6c3af689e9537438153303cbc3b1f45c6e1cce9417af77cb13/morphomatics-4.1.2.tar.gz (from https://pypi.org/simple/morphomatics/), version: 4.1.2 2025-06-01T20:36:19,772 Fetching project page and analyzing links: https://www.piwheels.org/simple/morphomatics/ 2025-06-01T20:36:19,774 Getting page https://www.piwheels.org/simple/morphomatics/ 2025-06-01T20:36:19,776 Found index url https://www.piwheels.org/simple/ 2025-06-01T20:36:19,946 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/morphomatics/ 2025-06-01T20:36:20,605 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/morphomatics/ 2025-06-01T20:36:21,789 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/morphomatics/ 2025-06-01T20:36:23,965 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/morphomatics/ 2025-06-01T20:36:28,136 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/morphomatics/ 2025-06-01T20:36:28,314 Could not fetch URL https://www.piwheels.org/simple/morphomatics/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/morphomatics/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-06-01T20:36:28,316 Skipping link: not a file: https://www.piwheels.org/simple/morphomatics/ 2025-06-01T20:36:28,316 Skipping link: not a file: https://pypi.org/simple/morphomatics/ 2025-06-01T20:36:28,337 Given no hashes to check 1 links for project 'morphomatics': discarding no candidates 2025-06-01T20:36:28,339 Collecting morphomatics==4.1.1 2025-06-01T20:36:28,341 Created temporary directory: /tmp/pip-unpack-5ii2zq89 2025-06-01T20:36:28,566 Downloading morphomatics-4.1.1.tar.gz (86 kB) 2025-06-01T20:36:28,788 Added morphomatics==4.1.1 from https://files.pythonhosted.org/packages/4e/3f/a253c08a0927615df880e8aeac6b9f2b11a0fc817772537e03f24861cfe0/morphomatics-4.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-5opj5q7n' 2025-06-01T20:36:28,791 Running setup.py (path:/tmp/pip-wheel-7b1ijq_n/morphomatics_ed54e83615fe4ffcadbf1d932c1718bd/setup.py) egg_info for package morphomatics 2025-06-01T20:36:28,792 Created temporary directory: /tmp/pip-pip-egg-info-b33mkboj 2025-06-01T20:36:28,792 Preparing metadata (setup.py): started 2025-06-01T20:36:28,794 Running command python setup.py egg_info 2025-06-01T20:36:29,369 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'version_name' 2025-06-01T20:36:29,369 warnings.warn(msg) 2025-06-01T20:36:29,676 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-06-01T20:36:29,676 !! 2025-06-01T20:36:29,677 ******************************************************************************** 2025-06-01T20:36:29,678 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-06-01T20:36:29,679 License :: OSI Approved :: MIT License 2025-06-01T20:36:29,681 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-06-01T20:36:29,681 ******************************************************************************** 2025-06-01T20:36:29,682 !! 2025-06-01T20:36:29,683 self._finalize_license_expression() 2025-06-01T20:36:29,704 running egg_info 2025-06-01T20:36:29,732 creating /tmp/pip-pip-egg-info-b33mkboj/morphomatics.egg-info 2025-06-01T20:36:29,733 writing /tmp/pip-pip-egg-info-b33mkboj/morphomatics.egg-info/PKG-INFO 2025-06-01T20:36:29,737 writing dependency_links to /tmp/pip-pip-egg-info-b33mkboj/morphomatics.egg-info/dependency_links.txt 2025-06-01T20:36:29,740 writing requirements to /tmp/pip-pip-egg-info-b33mkboj/morphomatics.egg-info/requires.txt 2025-06-01T20:36:29,741 writing top-level names to /tmp/pip-pip-egg-info-b33mkboj/morphomatics.egg-info/top_level.txt 2025-06-01T20:36:29,742 writing manifest file '/tmp/pip-pip-egg-info-b33mkboj/morphomatics.egg-info/SOURCES.txt' 2025-06-01T20:36:29,845 reading manifest file '/tmp/pip-pip-egg-info-b33mkboj/morphomatics.egg-info/SOURCES.txt' 2025-06-01T20:36:29,847 adding license file 'LICENSE' 2025-06-01T20:36:29,851 writing manifest file '/tmp/pip-pip-egg-info-b33mkboj/morphomatics.egg-info/SOURCES.txt' 2025-06-01T20:36:29,959 Preparing metadata (setup.py): finished with status 'done' 2025-06-01T20:36:29,962 Source in /tmp/pip-wheel-7b1ijq_n/morphomatics_ed54e83615fe4ffcadbf1d932c1718bd has version 4.1.1, which satisfies requirement morphomatics==4.1.1 from https://files.pythonhosted.org/packages/4e/3f/a253c08a0927615df880e8aeac6b9f2b11a0fc817772537e03f24861cfe0/morphomatics-4.1.1.tar.gz 2025-06-01T20:36:29,963 Removed morphomatics==4.1.1 from https://files.pythonhosted.org/packages/4e/3f/a253c08a0927615df880e8aeac6b9f2b11a0fc817772537e03f24861cfe0/morphomatics-4.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-5opj5q7n' 2025-06-01T20:36:29,969 Created temporary directory: /tmp/pip-unpack-ud6qyhlo 2025-06-01T20:36:29,970 Created temporary directory: /tmp/pip-unpack-l9wogcc2 2025-06-01T20:36:29,971 Building wheels for collected packages: morphomatics 2025-06-01T20:36:29,974 Created temporary directory: /tmp/pip-wheel-u3kdv6f2 2025-06-01T20:36:29,975 DEPRECATION: Building 'morphomatics' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'morphomatics'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-06-01T20:36:29,976 Building wheel for morphomatics (setup.py): started 2025-06-01T20:36:29,977 Destination directory: /tmp/pip-wheel-u3kdv6f2 2025-06-01T20:36:29,978 Running command python setup.py bdist_wheel 2025-06-01T20:36:30,510 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'version_name' 2025-06-01T20:36:30,511 warnings.warn(msg) 2025-06-01T20:36:30,807 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-06-01T20:36:30,807 !! 2025-06-01T20:36:30,808 ******************************************************************************** 2025-06-01T20:36:30,809 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-06-01T20:36:30,810 License :: OSI Approved :: MIT License 2025-06-01T20:36:30,811 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-06-01T20:36:30,812 ******************************************************************************** 2025-06-01T20:36:30,813 !! 2025-06-01T20:36:30,814 self._finalize_license_expression() 2025-06-01T20:36:30,814 running bdist_wheel 2025-06-01T20:36:30,943 running build 2025-06-01T20:36:30,944 running build_py 2025-06-01T20:36:30,975 creating build/lib/morphomatics 2025-06-01T20:36:30,977 copying morphomatics/__init__.py -> build/lib/morphomatics 2025-06-01T20:36:30,979 creating build/lib/morphomatics/correspondence 2025-06-01T20:36:30,980 copying morphomatics/correspondence/refine.py -> build/lib/morphomatics/correspondence 2025-06-01T20:36:30,983 copying morphomatics/correspondence/convert.py -> build/lib/morphomatics/correspondence 2025-06-01T20:36:30,985 copying morphomatics/correspondence/__init__.py -> build/lib/morphomatics/correspondence 2025-06-01T20:36:30,986 copying morphomatics/correspondence/util.py -> build/lib/morphomatics/correspondence 2025-06-01T20:36:30,989 copying morphomatics/correspondence/laplacian.py -> build/lib/morphomatics/correspondence 2025-06-01T20:36:30,992 creating build/lib/morphomatics/geom 2025-06-01T20:36:30,993 copying morphomatics/geom/surface.py -> build/lib/morphomatics/geom 2025-06-01T20:36:30,995 copying morphomatics/geom/__init__.py -> build/lib/morphomatics/geom 2025-06-01T20:36:30,997 copying morphomatics/geom/bezier_spline.py -> build/lib/morphomatics/geom 2025-06-01T20:36:31,000 copying morphomatics/geom/misc.py -> build/lib/morphomatics/geom 2025-06-01T20:36:31,003 creating build/lib/morphomatics/graph 2025-06-01T20:36:31,004 copying morphomatics/graph/__init__.py -> build/lib/morphomatics/graph 2025-06-01T20:36:31,006 copying morphomatics/graph/operators.py -> build/lib/morphomatics/graph 2025-06-01T20:36:31,010 creating build/lib/morphomatics/manifold 2025-06-01T20:36:31,012 copying morphomatics/manifold/so_3.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,014 copying morphomatics/manifold/bezierfold.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,017 copying morphomatics/manifold/manifold.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,019 copying morphomatics/manifold/diffeomorphism.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,022 copying morphomatics/manifold/fundamental_coords.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,024 copying morphomatics/manifold/se_3.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,027 copying morphomatics/manifold/__init__.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,029 copying morphomatics/manifold/simplex.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,031 copying morphomatics/manifold/metric.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,034 copying morphomatics/manifold/hyperbolic_space.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,036 copying morphomatics/manifold/cubic_bezierfold.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,039 copying morphomatics/manifold/tangent_bundle.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,042 copying morphomatics/manifold/spd.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,045 copying morphomatics/manifold/point_distribution_model.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,047 copying morphomatics/manifold/manopt_wrapper.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,049 copying morphomatics/manifold/lie_group.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,051 copying morphomatics/manifold/sphere.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,054 copying morphomatics/manifold/power_manifold.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,056 copying morphomatics/manifold/gl_p_n.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,059 copying morphomatics/manifold/euclidean.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,061 copying morphomatics/manifold/util.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,064 copying morphomatics/manifold/discrete_ops.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,066 copying morphomatics/manifold/product_manifold.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,068 copying morphomatics/manifold/shape_space.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,070 copying morphomatics/manifold/differential_coords.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,073 copying morphomatics/manifold/kendall.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,075 copying morphomatics/manifold/gl_p_coords.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,078 copying morphomatics/manifold/size_and_shape.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,080 copying morphomatics/manifold/connection.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,083 copying morphomatics/manifold/grassmann.py -> build/lib/morphomatics/manifold 2025-06-01T20:36:31,086 creating build/lib/morphomatics/nn 2025-06-01T20:36:31,087 copying morphomatics/nn/__init__.py -> build/lib/morphomatics/nn 2025-06-01T20:36:31,089 copying morphomatics/nn/wFM_layers.py -> build/lib/morphomatics/nn 2025-06-01T20:36:31,092 copying morphomatics/nn/train.py -> build/lib/morphomatics/nn 2025-06-01T20:36:31,095 copying morphomatics/nn/tangent_layers.py -> build/lib/morphomatics/nn 2025-06-01T20:36:31,097 copying morphomatics/nn/euclidean_layers.py -> build/lib/morphomatics/nn 2025-06-01T20:36:31,099 copying morphomatics/nn/flow_layers.py -> build/lib/morphomatics/nn 2025-06-01T20:36:31,102 creating build/lib/morphomatics/opt 2025-06-01T20:36:31,103 copying morphomatics/opt/riemannian_newton_raphson.py -> build/lib/morphomatics/opt 2025-06-01T20:36:31,106 copying morphomatics/opt/__init__.py -> build/lib/morphomatics/opt 2025-06-01T20:36:31,108 copying morphomatics/opt/riemannian_steepest_descent.py -> build/lib/morphomatics/opt 2025-06-01T20:36:31,110 creating build/lib/morphomatics/stats 2025-06-01T20:36:31,111 copying morphomatics/stats/geometric_median.py -> build/lib/morphomatics/stats 2025-06-01T20:36:31,113 copying morphomatics/stats/biinvariant_regression.py -> build/lib/morphomatics/stats 2025-06-01T20:36:31,116 copying morphomatics/stats/__init__.py -> build/lib/morphomatics/stats 2025-06-01T20:36:31,118 copying morphomatics/stats/exponential_barycenter.py -> build/lib/morphomatics/stats 2025-06-01T20:36:31,119 copying morphomatics/stats/riemannian_regression.py -> build/lib/morphomatics/stats 2025-06-01T20:36:31,122 copying morphomatics/stats/biinvariant_dissimilarity_measures.py -> build/lib/morphomatics/stats 2025-06-01T20:36:31,124 copying morphomatics/stats/principal_geodesic_analysis.py -> build/lib/morphomatics/stats 2025-06-01T20:36:31,127 copying morphomatics/stats/statistical_shape_model.py -> build/lib/morphomatics/stats 2025-06-01T20:36:31,167 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-06-01T20:36:31,167 !! 2025-06-01T20:36:31,168 ******************************************************************************** 2025-06-01T20:36:31,169 Please avoid running ``setup.py`` directly. 2025-06-01T20:36:31,169 Instead, use pypa/build, pypa/installer or other 2025-06-01T20:36:31,170 standards-based tools. 2025-06-01T20:36:31,171 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-01T20:36:31,172 or your builds will no longer be supported. 2025-06-01T20:36:31,173 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-06-01T20:36:31,173 ******************************************************************************** 2025-06-01T20:36:31,174 !! 2025-06-01T20:36:31,175 self.initialize_options() 2025-06-01T20:36:31,194 installing to build/bdist.linux-armv7l/wheel 2025-06-01T20:36:31,195 running install 2025-06-01T20:36:31,221 running install_lib 2025-06-01T20:36:31,247 creating build/bdist.linux-armv7l/wheel 2025-06-01T20:36:31,249 creating build/bdist.linux-armv7l/wheel/morphomatics 2025-06-01T20:36:31,251 creating build/bdist.linux-armv7l/wheel/morphomatics/opt 2025-06-01T20:36:31,252 copying build/lib/morphomatics/opt/riemannian_newton_raphson.py -> build/bdist.linux-armv7l/wheel/./morphomatics/opt 2025-06-01T20:36:31,254 copying build/lib/morphomatics/opt/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/opt 2025-06-01T20:36:31,255 copying build/lib/morphomatics/opt/riemannian_steepest_descent.py -> build/bdist.linux-armv7l/wheel/./morphomatics/opt 2025-06-01T20:36:31,258 creating build/bdist.linux-armv7l/wheel/morphomatics/stats 2025-06-01T20:36:31,259 copying build/lib/morphomatics/stats/geometric_median.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-01T20:36:31,261 copying build/lib/morphomatics/stats/biinvariant_regression.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-01T20:36:31,263 copying build/lib/morphomatics/stats/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-01T20:36:31,265 copying build/lib/morphomatics/stats/exponential_barycenter.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-01T20:36:31,267 copying build/lib/morphomatics/stats/riemannian_regression.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-01T20:36:31,270 copying build/lib/morphomatics/stats/biinvariant_dissimilarity_measures.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-01T20:36:31,272 copying build/lib/morphomatics/stats/principal_geodesic_analysis.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-01T20:36:31,275 copying build/lib/morphomatics/stats/statistical_shape_model.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-01T20:36:31,277 creating build/bdist.linux-armv7l/wheel/morphomatics/graph 2025-06-01T20:36:31,279 copying build/lib/morphomatics/graph/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/graph 2025-06-01T20:36:31,281 copying build/lib/morphomatics/graph/operators.py -> build/bdist.linux-armv7l/wheel/./morphomatics/graph 2025-06-01T20:36:31,283 copying build/lib/morphomatics/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics 2025-06-01T20:36:31,286 creating build/bdist.linux-armv7l/wheel/morphomatics/geom 2025-06-01T20:36:31,287 copying build/lib/morphomatics/geom/surface.py -> build/bdist.linux-armv7l/wheel/./morphomatics/geom 2025-06-01T20:36:31,289 copying build/lib/morphomatics/geom/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/geom 2025-06-01T20:36:31,291 copying build/lib/morphomatics/geom/bezier_spline.py -> build/bdist.linux-armv7l/wheel/./morphomatics/geom 2025-06-01T20:36:31,294 copying build/lib/morphomatics/geom/misc.py -> build/bdist.linux-armv7l/wheel/./morphomatics/geom 2025-06-01T20:36:31,297 creating build/bdist.linux-armv7l/wheel/morphomatics/nn 2025-06-01T20:36:31,298 copying build/lib/morphomatics/nn/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-01T20:36:31,300 copying build/lib/morphomatics/nn/wFM_layers.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-01T20:36:31,303 copying build/lib/morphomatics/nn/train.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-01T20:36:31,305 copying build/lib/morphomatics/nn/tangent_layers.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-01T20:36:31,307 copying build/lib/morphomatics/nn/euclidean_layers.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-01T20:36:31,309 copying build/lib/morphomatics/nn/flow_layers.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-01T20:36:31,312 creating build/bdist.linux-armv7l/wheel/morphomatics/correspondence 2025-06-01T20:36:31,313 copying build/lib/morphomatics/correspondence/refine.py -> build/bdist.linux-armv7l/wheel/./morphomatics/correspondence 2025-06-01T20:36:31,315 copying build/lib/morphomatics/correspondence/convert.py -> build/bdist.linux-armv7l/wheel/./morphomatics/correspondence 2025-06-01T20:36:31,318 copying build/lib/morphomatics/correspondence/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/correspondence 2025-06-01T20:36:31,319 copying build/lib/morphomatics/correspondence/util.py -> build/bdist.linux-armv7l/wheel/./morphomatics/correspondence 2025-06-01T20:36:31,322 copying build/lib/morphomatics/correspondence/laplacian.py -> build/bdist.linux-armv7l/wheel/./morphomatics/correspondence 2025-06-01T20:36:31,325 creating build/bdist.linux-armv7l/wheel/morphomatics/manifold 2025-06-01T20:36:31,326 copying build/lib/morphomatics/manifold/so_3.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,329 copying build/lib/morphomatics/manifold/bezierfold.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,332 copying build/lib/morphomatics/manifold/manifold.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,335 copying build/lib/morphomatics/manifold/diffeomorphism.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,337 copying build/lib/morphomatics/manifold/fundamental_coords.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,340 copying build/lib/morphomatics/manifold/se_3.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,342 copying build/lib/morphomatics/manifold/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,345 copying build/lib/morphomatics/manifold/simplex.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,347 copying build/lib/morphomatics/manifold/metric.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,350 copying build/lib/morphomatics/manifold/hyperbolic_space.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,353 copying build/lib/morphomatics/manifold/cubic_bezierfold.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,355 copying build/lib/morphomatics/manifold/tangent_bundle.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,358 copying build/lib/morphomatics/manifold/spd.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,360 copying build/lib/morphomatics/manifold/point_distribution_model.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,362 copying build/lib/morphomatics/manifold/manopt_wrapper.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,365 copying build/lib/morphomatics/manifold/lie_group.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,366 copying build/lib/morphomatics/manifold/sphere.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,369 copying build/lib/morphomatics/manifold/power_manifold.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,372 copying build/lib/morphomatics/manifold/gl_p_n.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,374 copying build/lib/morphomatics/manifold/euclidean.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,376 copying build/lib/morphomatics/manifold/util.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,379 copying build/lib/morphomatics/manifold/discrete_ops.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,381 copying build/lib/morphomatics/manifold/product_manifold.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,384 copying build/lib/morphomatics/manifold/shape_space.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,386 copying build/lib/morphomatics/manifold/differential_coords.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,388 copying build/lib/morphomatics/manifold/kendall.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,391 copying build/lib/morphomatics/manifold/gl_p_coords.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,393 copying build/lib/morphomatics/manifold/size_and_shape.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,395 copying build/lib/morphomatics/manifold/connection.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,398 copying build/lib/morphomatics/manifold/grassmann.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-01T20:36:31,400 running install_egg_info 2025-06-01T20:36:31,438 running egg_info 2025-06-01T20:36:31,465 writing morphomatics.egg-info/PKG-INFO 2025-06-01T20:36:31,469 writing dependency_links to morphomatics.egg-info/dependency_links.txt 2025-06-01T20:36:31,471 writing requirements to morphomatics.egg-info/requires.txt 2025-06-01T20:36:31,472 writing top-level names to morphomatics.egg-info/top_level.txt 2025-06-01T20:36:31,511 reading manifest file 'morphomatics.egg-info/SOURCES.txt' 2025-06-01T20:36:31,517 adding license file 'LICENSE' 2025-06-01T20:36:31,522 writing manifest file 'morphomatics.egg-info/SOURCES.txt' 2025-06-01T20:36:31,523 Copying morphomatics.egg-info to build/bdist.linux-armv7l/wheel/./morphomatics-4.1.1-py3.11.egg-info 2025-06-01T20:36:31,533 running install_scripts 2025-06-01T20:36:31,543 creating build/bdist.linux-armv7l/wheel/morphomatics-4.1.1.dist-info/WHEEL 2025-06-01T20:36:31,545 creating '/tmp/pip-wheel-u3kdv6f2/morphomatics-4.1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-06-01T20:36:31,548 adding 'morphomatics/__init__.py' 2025-06-01T20:36:31,551 adding 'morphomatics/correspondence/__init__.py' 2025-06-01T20:36:31,552 adding 'morphomatics/correspondence/convert.py' 2025-06-01T20:36:31,554 adding 'morphomatics/correspondence/laplacian.py' 2025-06-01T20:36:31,555 adding 'morphomatics/correspondence/refine.py' 2025-06-01T20:36:31,558 adding 'morphomatics/correspondence/util.py' 2025-06-01T20:36:31,560 adding 'morphomatics/geom/__init__.py' 2025-06-01T20:36:31,563 adding 'morphomatics/geom/bezier_spline.py' 2025-06-01T20:36:31,565 adding 'morphomatics/geom/misc.py' 2025-06-01T20:36:31,567 adding 'morphomatics/geom/surface.py' 2025-06-01T20:36:31,568 adding 'morphomatics/graph/__init__.py' 2025-06-01T20:36:31,570 adding 'morphomatics/graph/operators.py' 2025-06-01T20:36:31,572 adding 'morphomatics/manifold/__init__.py' 2025-06-01T20:36:31,575 adding 'morphomatics/manifold/bezierfold.py' 2025-06-01T20:36:31,576 adding 'morphomatics/manifold/connection.py' 2025-06-01T20:36:31,578 adding 'morphomatics/manifold/cubic_bezierfold.py' 2025-06-01T20:36:31,580 adding 'morphomatics/manifold/diffeomorphism.py' 2025-06-01T20:36:31,582 adding 'morphomatics/manifold/differential_coords.py' 2025-06-01T20:36:31,583 adding 'morphomatics/manifold/discrete_ops.py' 2025-06-01T20:36:31,584 adding 'morphomatics/manifold/euclidean.py' 2025-06-01T20:36:31,587 adding 'morphomatics/manifold/fundamental_coords.py' 2025-06-01T20:36:31,589 adding 'morphomatics/manifold/gl_p_coords.py' 2025-06-01T20:36:31,591 adding 'morphomatics/manifold/gl_p_n.py' 2025-06-01T20:36:31,592 adding 'morphomatics/manifold/grassmann.py' 2025-06-01T20:36:31,594 adding 'morphomatics/manifold/hyperbolic_space.py' 2025-06-01T20:36:31,596 adding 'morphomatics/manifold/kendall.py' 2025-06-01T20:36:31,598 adding 'morphomatics/manifold/lie_group.py' 2025-06-01T20:36:31,599 adding 'morphomatics/manifold/manifold.py' 2025-06-01T20:36:31,601 adding 'morphomatics/manifold/manopt_wrapper.py' 2025-06-01T20:36:31,603 adding 'morphomatics/manifold/metric.py' 2025-06-01T20:36:31,604 adding 'morphomatics/manifold/point_distribution_model.py' 2025-06-01T20:36:31,606 adding 'morphomatics/manifold/power_manifold.py' 2025-06-01T20:36:31,608 adding 'morphomatics/manifold/product_manifold.py' 2025-06-01T20:36:31,611 adding 'morphomatics/manifold/se_3.py' 2025-06-01T20:36:31,612 adding 'morphomatics/manifold/shape_space.py' 2025-06-01T20:36:31,614 adding 'morphomatics/manifold/simplex.py' 2025-06-01T20:36:31,616 adding 'morphomatics/manifold/size_and_shape.py' 2025-06-01T20:36:31,618 adding 'morphomatics/manifold/so_3.py' 2025-06-01T20:36:31,621 adding 'morphomatics/manifold/spd.py' 2025-06-01T20:36:31,623 adding 'morphomatics/manifold/sphere.py' 2025-06-01T20:36:31,625 adding 'morphomatics/manifold/tangent_bundle.py' 2025-06-01T20:36:31,627 adding 'morphomatics/manifold/util.py' 2025-06-01T20:36:31,629 adding 'morphomatics/nn/__init__.py' 2025-06-01T20:36:31,631 adding 'morphomatics/nn/euclidean_layers.py' 2025-06-01T20:36:31,633 adding 'morphomatics/nn/flow_layers.py' 2025-06-01T20:36:31,635 adding 'morphomatics/nn/tangent_layers.py' 2025-06-01T20:36:31,636 adding 'morphomatics/nn/train.py' 2025-06-01T20:36:31,638 adding 'morphomatics/nn/wFM_layers.py' 2025-06-01T20:36:31,640 adding 'morphomatics/opt/__init__.py' 2025-06-01T20:36:31,642 adding 'morphomatics/opt/riemannian_newton_raphson.py' 2025-06-01T20:36:31,643 adding 'morphomatics/opt/riemannian_steepest_descent.py' 2025-06-01T20:36:31,645 adding 'morphomatics/stats/__init__.py' 2025-06-01T20:36:31,647 adding 'morphomatics/stats/biinvariant_dissimilarity_measures.py' 2025-06-01T20:36:31,649 adding 'morphomatics/stats/biinvariant_regression.py' 2025-06-01T20:36:31,651 adding 'morphomatics/stats/exponential_barycenter.py' 2025-06-01T20:36:31,653 adding 'morphomatics/stats/geometric_median.py' 2025-06-01T20:36:31,654 adding 'morphomatics/stats/principal_geodesic_analysis.py' 2025-06-01T20:36:31,657 adding 'morphomatics/stats/riemannian_regression.py' 2025-06-01T20:36:31,659 adding 'morphomatics/stats/statistical_shape_model.py' 2025-06-01T20:36:31,661 adding 'morphomatics-4.1.1.dist-info/licenses/LICENSE' 2025-06-01T20:36:31,663 adding 'morphomatics-4.1.1.dist-info/METADATA' 2025-06-01T20:36:31,664 adding 'morphomatics-4.1.1.dist-info/WHEEL' 2025-06-01T20:36:31,665 adding 'morphomatics-4.1.1.dist-info/top_level.txt' 2025-06-01T20:36:31,666 adding 'morphomatics-4.1.1.dist-info/RECORD' 2025-06-01T20:36:31,669 removing build/bdist.linux-armv7l/wheel 2025-06-01T20:36:31,795 Building wheel for morphomatics (setup.py): finished with status 'done' 2025-06-01T20:36:31,799 Created wheel for morphomatics: filename=morphomatics-4.1.1-py3-none-any.whl size=129618 sha256=c15ca6d6e055d759f213c5719a14cd11c3b68c4722ea586070bc2de8611e2186 2025-06-01T20:36:31,800 Stored in directory: /tmp/pip-ephem-wheel-cache-cb6s_1xd/wheels/43/31/81/88f70f2da5f7f74769e320dca2ce054bd473b497ac1b01e69a 2025-06-01T20:36:31,812 Successfully built morphomatics 2025-06-01T20:36:31,820 Removed build tracker: '/tmp/pip-build-tracker-5opj5q7n'