2025-06-02T08:19:43,907 Created temporary directory: /tmp/pip-build-tracker-gjmct8rb 2025-06-02T08:19:43,908 Initialized build tracking at /tmp/pip-build-tracker-gjmct8rb 2025-06-02T08:19:43,909 Created build tracker: /tmp/pip-build-tracker-gjmct8rb 2025-06-02T08:19:43,909 Entered build tracker: /tmp/pip-build-tracker-gjmct8rb 2025-06-02T08:19:43,910 Created temporary directory: /tmp/pip-wheel-vc9_upox 2025-06-02T08:19:43,914 Created temporary directory: /tmp/pip-ephem-wheel-cache-zkb0z58w 2025-06-02T08:19:43,961 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-06-02T08:19:43,964 2 location(s) to search for versions of emannotationschemas: 2025-06-02T08:19:43,964 * https://pypi.org/simple/emannotationschemas/ 2025-06-02T08:19:43,964 * https://www.piwheels.org/simple/emannotationschemas/ 2025-06-02T08:19:43,965 Fetching project page and analyzing links: https://pypi.org/simple/emannotationschemas/ 2025-06-02T08:19:43,965 Getting page 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https://files.pythonhosted.org/packages/c1/b5/26636e146ee0f0a52fd9ca1deab0434b15c919f2c887fdc17d1dee971c72/emannotationschemas-5.8.0.tar.gz (from https://pypi.org/simple/emannotationschemas/), version: 5.8.0 2025-06-02T08:19:44,298 Skipping link: No binaries permitted for emannotationschemas: https://files.pythonhosted.org/packages/ef/f7/46341d67829bce77ef7369f234323f5e0b92ec30a1557c6ad49d8fbcfac7/emannotationschemas-5.10.4-py3-none-any.whl (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8) 2025-06-02T08:19:44,299 Found link https://files.pythonhosted.org/packages/94/17/7749ef8d9241bdfe08c372b0559652dc30cf238f7b29ad6a16438a5ce72a/emannotationschemas-5.10.4.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.10.4 2025-06-02T08:19:44,300 Skipping link: No binaries permitted for emannotationschemas: https://files.pythonhosted.org/packages/e1/6e/e9a771ef0d72c3d25a0cd4fe54530af88942996bd67fa144b279ce396b48/emannotationschemas-5.11.0-py3-none-any.whl (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8) 2025-06-02T08:19:44,301 Found link https://files.pythonhosted.org/packages/45/c7/99feefb70285bffa2960ce8622489f01cb756294578260329a457216709f/emannotationschemas-5.11.0.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.11.0 2025-06-02T08:19:44,301 Skipping link: No binaries permitted for emannotationschemas: https://files.pythonhosted.org/packages/2b/57/c40d18baa098c3b461a9fa833420aa62325a25c4a1c7dbed0f09c54297dc/emannotationschemas-5.12.0-py3-none-any.whl (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8) 2025-06-02T08:19:44,302 Found link https://files.pythonhosted.org/packages/ac/13/81111b66484be106a42cebca48e8e3001e05b06b0ee4929993f92b8b17db/emannotationschemas-5.12.0.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.12.0 2025-06-02T08:19:44,303 Skipping link: No binaries permitted for emannotationschemas: https://files.pythonhosted.org/packages/7d/04/7f78340a13cda0c1d53093c7fc12f23af151d885c14c5cbfb40a0a6d7796/emannotationschemas-5.13.0-py3-none-any.whl (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8) 2025-06-02T08:19:44,303 Found link https://files.pythonhosted.org/packages/99/c3/a4b647616b879b803cb6d19b54f4a4193370af8b5aae63e247624d0e00d5/emannotationschemas-5.13.0.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.13.0 2025-06-02T08:19:44,304 Found link https://files.pythonhosted.org/packages/63/5b/7c19b0a837fef96a6d265531acf90aa9ad65026614fa3e2c5c2f21496ae5/emannotationschemas-5.14.0.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.14.0 2025-06-02T08:19:44,304 Found link https://files.pythonhosted.org/packages/08/12/250c033e935829528ed75ae2023c474b4f4a2028143e0b827690d3b1b99c/emannotationschemas-5.15.0.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.15.0 2025-06-02T08:19:44,305 Found link https://files.pythonhosted.org/packages/94/6f/d5574ce9feebb02523a3b67d61697642d96bd476b0b156ce8b15cac12940/emannotationschemas-5.16.0.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.16.0 2025-06-02T08:19:44,305 Found link https://files.pythonhosted.org/packages/1a/2f/47d26af12efc76c1b77d87a369b81c2da56ec17170f2f50a95f3850054af/emannotationschemas-5.17.0.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.17.0 2025-06-02T08:19:44,306 Found link https://files.pythonhosted.org/packages/ef/8a/c85b0dab2d66b899db4aced9ca8c072e7a6b15f41b2bb59ec173d47142d3/emannotationschemas-5.19.0.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.19.0 2025-06-02T08:19:44,307 Found link https://files.pythonhosted.org/packages/5d/c9/1f1aebce1913b8c064c7d7b0460272f9a3cc454bf31b6efb164776720072/emannotationschemas-5.23.0.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.23.0 2025-06-02T08:19:44,307 Found link https://files.pythonhosted.org/packages/76/bb/8b6918c228d7568ddd0488981b3a11556b99dc1d134bfdd5151f276a8716/emannotationschemas-5.24.0.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.0 2025-06-02T08:19:44,308 Found link https://files.pythonhosted.org/packages/94/0f/2546b85382e1d49b88eb030a21c8a9e516eef54e11cb9973eb54f0f3356a/emannotationschemas-5.24.1.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.1 2025-06-02T08:19:44,308 Found link https://files.pythonhosted.org/packages/c2/91/e9983d40b365151e8f4038d52bed234ff37328c77b7f6b24071d134d243c/emannotationschemas-5.24.2.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.2 2025-06-02T08:19:44,309 Found link https://files.pythonhosted.org/packages/08/21/3372eea6e979167f5a1954ceb5bc3c19096ebf29d61ad5fcb8eff34e7d38/emannotationschemas-5.24.3.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.3 2025-06-02T08:19:44,310 Found link https://files.pythonhosted.org/packages/9e/f9/f86a47fd8c357006f298e581d8f5d64ccc82e6f94c20aa2ba3f0befe3e0d/emannotationschemas-5.24.4.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.4 2025-06-02T08:19:44,310 Found link https://files.pythonhosted.org/packages/15/4c/31f088ce0836c8449518e4df05853283867d40903fec036ae1bd07b9aabe/emannotationschemas-5.24.5.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.5 2025-06-02T08:19:44,311 Found link https://files.pythonhosted.org/packages/af/76/c4410f2d99532333a903e0b33e5952aaf0cc9fe10b8a9e7f3370fd8b8b3f/emannotationschemas-5.24.6.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.6 2025-06-02T08:19:44,312 Found link https://files.pythonhosted.org/packages/dd/56/6b44bda3e434a63191ad8621f8936c6fb296e06386f70a311f68f90d0ded/emannotationschemas-5.24.7.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.7 2025-06-02T08:19:44,312 Found link https://files.pythonhosted.org/packages/0f/b6/913e441b416fb455e45f410493d82f05eadbb95c53c544598583b389b88d/emannotationschemas-5.24.8.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.8 2025-06-02T08:19:44,313 Found link https://files.pythonhosted.org/packages/4f/ec/c17d0ff00a41ea8b318d5227f06b28a15308c45126cacbce481ec4d2b022/emannotationschemas-5.24.9.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.9 2025-06-02T08:19:44,313 Found link https://files.pythonhosted.org/packages/ce/8f/fed594480a20c70082a34bec2e07376877374094cbbec5c0059e33b0166a/emannotationschemas-5.24.10.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.10 2025-06-02T08:19:44,314 Found link https://files.pythonhosted.org/packages/85/3a/6b4395b783cf33e7d36de5710241d0a438f801c841e9dd5bcf3956880365/emannotationschemas-5.24.11.tar.gz (from https://pypi.org/simple/emannotationschemas/) (requires-python:>=3.8), version: 5.24.11 2025-06-02T08:19:44,315 Fetching project page and analyzing links: https://www.piwheels.org/simple/emannotationschemas/ 2025-06-02T08:19:44,315 Getting page https://www.piwheels.org/simple/emannotationschemas/ 2025-06-02T08:19:44,317 Found index url https://www.piwheels.org/simple/ 2025-06-02T08:19:44,465 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/emannotationschemas/ 2025-06-02T08:19:45,116 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/emannotationschemas/ 2025-06-02T08:19:46,265 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/emannotationschemas/ 2025-06-02T08:19:48,471 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/emannotationschemas/ 2025-06-02T08:19:52,684 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/emannotationschemas/ 2025-06-02T08:19:52,901 Could not fetch URL https://www.piwheels.org/simple/emannotationschemas/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/emannotationschemas/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-06-02T08:19:52,902 Skipping link: not a file: https://www.piwheels.org/simple/emannotationschemas/ 2025-06-02T08:19:52,903 Skipping link: not a file: https://pypi.org/simple/emannotationschemas/ 2025-06-02T08:19:52,934 Given no hashes to check 1 links for project 'emannotationschemas': discarding no candidates 2025-06-02T08:19:52,936 Collecting emannotationschemas==5.23.0 2025-06-02T08:19:52,938 Created temporary directory: /tmp/pip-unpack-a66fttrx 2025-06-02T08:19:53,158 Downloading emannotationschemas-5.23.0.tar.gz (37 kB) 2025-06-02T08:19:53,315 Added emannotationschemas==5.23.0 from https://files.pythonhosted.org/packages/5d/c9/1f1aebce1913b8c064c7d7b0460272f9a3cc454bf31b6efb164776720072/emannotationschemas-5.23.0.tar.gz to build tracker '/tmp/pip-build-tracker-gjmct8rb' 2025-06-02T08:19:53,318 Running setup.py (path:/tmp/pip-wheel-vc9_upox/emannotationschemas_4163ced0de4f4db199d466b698c76f5d/setup.py) egg_info for package emannotationschemas 2025-06-02T08:19:53,318 Created temporary directory: /tmp/pip-pip-egg-info-w5ahf6zg 2025-06-02T08:19:53,319 Preparing metadata (setup.py): started 2025-06-02T08:19:53,320 Running command python setup.py egg_info 2025-06-02T08:19:53,866 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-06-02T08:19:53,866 !! 2025-06-02T08:19:53,867 ******************************************************************************** 2025-06-02T08:19:53,868 Requirements should be satisfied by a PEP 517 installer. 2025-06-02T08:19:53,868 If you are using pip, you can try `pip install --use-pep517`. 2025-06-02T08:19:53,869 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-02T08:19:53,870 or your builds will no longer be supported. 2025-06-02T08:19:53,870 ******************************************************************************** 2025-06-02T08:19:53,872 !! 2025-06-02T08:19:53,872 dist.fetch_build_eggs(dist.setup_requires) 2025-06-02T08:19:56,440 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' 2025-06-02T08:19:56,441 warnings.warn(msg) 2025-06-02T08:19:56,529 running egg_info 2025-06-02T08:19:56,557 creating /tmp/pip-pip-egg-info-w5ahf6zg/emannotationschemas.egg-info 2025-06-02T08:19:56,558 writing /tmp/pip-pip-egg-info-w5ahf6zg/emannotationschemas.egg-info/PKG-INFO 2025-06-02T08:19:56,565 writing dependency_links to /tmp/pip-pip-egg-info-w5ahf6zg/emannotationschemas.egg-info/dependency_links.txt 2025-06-02T08:19:56,569 writing requirements to /tmp/pip-pip-egg-info-w5ahf6zg/emannotationschemas.egg-info/requires.txt 2025-06-02T08:19:56,570 writing top-level names to /tmp/pip-pip-egg-info-w5ahf6zg/emannotationschemas.egg-info/top_level.txt 2025-06-02T08:19:56,571 writing manifest file '/tmp/pip-pip-egg-info-w5ahf6zg/emannotationschemas.egg-info/SOURCES.txt' 2025-06-02T08:19:56,667 reading manifest file '/tmp/pip-pip-egg-info-w5ahf6zg/emannotationschemas.egg-info/SOURCES.txt' 2025-06-02T08:19:56,668 reading manifest template 'MANIFEST.in' 2025-06-02T08:19:56,670 adding license file 'LICENSE' 2025-06-02T08:19:56,674 writing manifest file '/tmp/pip-pip-egg-info-w5ahf6zg/emannotationschemas.egg-info/SOURCES.txt' 2025-06-02T08:19:56,782 Preparing metadata (setup.py): finished with status 'done' 2025-06-02T08:19:56,786 Source in /tmp/pip-wheel-vc9_upox/emannotationschemas_4163ced0de4f4db199d466b698c76f5d has version 5.23.0, which satisfies requirement emannotationschemas==5.23.0 from https://files.pythonhosted.org/packages/5d/c9/1f1aebce1913b8c064c7d7b0460272f9a3cc454bf31b6efb164776720072/emannotationschemas-5.23.0.tar.gz 2025-06-02T08:19:56,787 Removed emannotationschemas==5.23.0 from https://files.pythonhosted.org/packages/5d/c9/1f1aebce1913b8c064c7d7b0460272f9a3cc454bf31b6efb164776720072/emannotationschemas-5.23.0.tar.gz from build tracker '/tmp/pip-build-tracker-gjmct8rb' 2025-06-02T08:19:56,798 Created temporary directory: /tmp/pip-unpack-9lyn36bh 2025-06-02T08:19:56,799 Created temporary directory: /tmp/pip-unpack-e9_o3tjy 2025-06-02T08:19:56,799 Building wheels for collected packages: emannotationschemas 2025-06-02T08:19:56,803 Created temporary directory: /tmp/pip-wheel-y5_nkqcr 2025-06-02T08:19:56,804 DEPRECATION: Building 'emannotationschemas' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'emannotationschemas'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-06-02T08:19:56,805 Building wheel for emannotationschemas (setup.py): started 2025-06-02T08:19:56,806 Destination directory: /tmp/pip-wheel-y5_nkqcr 2025-06-02T08:19:56,807 Running command python setup.py bdist_wheel 2025-06-02T08:19:57,330 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-06-02T08:19:57,331 !! 2025-06-02T08:19:57,332 ******************************************************************************** 2025-06-02T08:19:57,332 Requirements should be satisfied by a PEP 517 installer. 2025-06-02T08:19:57,333 If you are using pip, you can try `pip install --use-pep517`. 2025-06-02T08:19:57,334 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-02T08:19:57,334 or your builds will no longer be supported. 2025-06-02T08:19:57,335 ******************************************************************************** 2025-06-02T08:19:57,336 !! 2025-06-02T08:19:57,336 dist.fetch_build_eggs(dist.setup_requires) 2025-06-02T08:19:57,537 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' 2025-06-02T08:19:57,537 warnings.warn(msg) 2025-06-02T08:19:57,815 running bdist_wheel 2025-06-02T08:19:57,949 running build 2025-06-02T08:19:57,950 running build_py 2025-06-02T08:19:57,980 creating build/lib/tests 2025-06-02T08:19:57,983 copying tests/test_schema_blueprint.py -> build/lib/tests 2025-06-02T08:19:57,985 copying tests/test_flatten.py -> build/lib/tests 2025-06-02T08:19:57,987 copying tests/__init__.py -> build/lib/tests 2025-06-02T08:19:57,989 copying tests/test_extended_classical_cell_type.py -> build/lib/tests 2025-06-02T08:19:57,991 copying tests/test_synapse_reference_schema.py -> build/lib/tests 2025-06-02T08:19:57,993 copying tests/test_derived_spatial_point.py -> build/lib/tests 2025-06-02T08:19:57,995 copying tests/test_contact.py -> build/lib/tests 2025-06-02T08:19:57,997 copying tests/test_synapse_schema.py -> build/lib/tests 2025-06-02T08:19:57,999 copying tests/test_glia_contact.py -> build/lib/tests 2025-06-02T08:19:58,001 copying tests/test_neuropil.py -> build/lib/tests 2025-06-02T08:19:58,003 copying tests/conftest.py -> build/lib/tests 2025-06-02T08:19:58,005 copying tests/test_bouton_shape.py -> build/lib/tests 2025-06-02T08:19:58,007 copying tests/test_nested.py -> build/lib/tests 2025-06-02T08:19:58,009 copying tests/test_cell_types.py -> build/lib/tests 2025-06-02T08:19:58,011 copying tests/test_proofreading_schema.py -> build/lib/tests 2025-06-02T08:19:58,013 copying tests/test_schema_module.py -> build/lib/tests 2025-06-02T08:19:58,015 copying tests/test_nucleus_detection.py -> build/lib/tests 2025-06-02T08:19:58,017 copying tests/test_models.py -> build/lib/tests 2025-06-02T08:19:58,019 copying tests/test_fly_cell_types.py -> build/lib/tests 2025-06-02T08:19:58,022 creating build/lib/emannotationschemas 2025-06-02T08:19:58,023 copying emannotationschemas/flatten.py -> build/lib/emannotationschemas 2025-06-02T08:19:58,025 copying emannotationschemas/__init__.py -> build/lib/emannotationschemas 2025-06-02T08:19:58,027 copying emannotationschemas/models.py -> build/lib/emannotationschemas 2025-06-02T08:19:58,030 copying emannotationschemas/errors.py -> build/lib/emannotationschemas 2025-06-02T08:19:58,031 copying emannotationschemas/config.py -> build/lib/emannotationschemas 2025-06-02T08:19:58,033 copying emannotationschemas/blueprint_app.py -> build/lib/emannotationschemas 2025-06-02T08:19:58,035 copying emannotationschemas/utils.py -> build/lib/emannotationschemas 2025-06-02T08:19:58,037 copying emannotationschemas/views.py -> build/lib/emannotationschemas 2025-06-02T08:19:58,039 copying emannotationschemas/app.py -> build/lib/emannotationschemas 2025-06-02T08:19:58,042 creating build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,043 copying emannotationschemas/schemas/cell_type_local.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,045 copying emannotationschemas/schemas/bouton_shape.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,047 copying emannotationschemas/schemas/bound_text_tag.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,049 copying emannotationschemas/schemas/functional_props.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,051 copying emannotationschemas/schemas/__init__.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,052 copying emannotationschemas/schemas/braincircuits.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,054 copying emannotationschemas/schemas/reference_text_float.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,056 copying emannotationschemas/schemas/derived_spatial_point.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,058 copying emannotationschemas/schemas/glia_contact.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,060 copying emannotationschemas/schemas/presynaptic_bouton_type.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,062 copying emannotationschemas/schemas/bound_bool_tag.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,064 copying emannotationschemas/schemas/neuropil.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,066 copying emannotationschemas/schemas/contact.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,068 copying emannotationschemas/schemas/postsynaptic_compartment.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,070 copying emannotationschemas/schemas/synapse.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,072 copying emannotationschemas/schemas/extended_classical_cell_type.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,074 copying emannotationschemas/schemas/groups.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,076 copying emannotationschemas/schemas/nucleus_detection.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,078 copying emannotationschemas/schemas/base.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,080 copying emannotationschemas/schemas/proofreading.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,082 copying emannotationschemas/schemas/fly_cell_types.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,084 copying emannotationschemas/schemas/functional_coregistration.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,086 copying emannotationschemas/schemas/categorical_factories.py -> build/lib/emannotationschemas/schemas 2025-06-02T08:19:58,089 creating build/lib/emannotationschemas/migrations 2025-06-02T08:19:58,090 copying emannotationschemas/migrations/env.py -> build/lib/emannotationschemas/migrations 2025-06-02T08:19:58,092 copying emannotationschemas/migrations/__init__.py -> build/lib/emannotationschemas/migrations 2025-06-02T08:19:58,094 copying emannotationschemas/migrations/run.py -> build/lib/emannotationschemas/migrations 2025-06-02T08:19:58,096 creating build/lib/emannotationschemas/migrations/versions 2025-06-02T08:19:58,097 copying emannotationschemas/migrations/versions/__init__.py -> build/lib/emannotationschemas/migrations/versions 2025-06-02T08:19:58,099 copying emannotationschemas/migrations/versions/ad07b1b72351_add_additional_schemas.py -> build/lib/emannotationschemas/migrations/versions 2025-06-02T08:19:58,101 copying emannotationschemas/migrations/versions/bc42c1e4cc1a_base_schemas.py -> build/lib/emannotationschemas/migrations/versions 2025-06-02T08:19:58,104 copying emannotationschemas/migrations/versions/13dffb003203_add_delete_cascade_to_fkeys.py -> build/lib/emannotationschemas/migrations/versions 2025-06-02T08:19:58,107 copying emannotationschemas/migrations/versions/34476f534ca9_add_new_schemas.py -> build/lib/emannotationschemas/migrations/versions 2025-06-02T08:19:58,109 running egg_info 2025-06-02T08:19:58,138 writing emannotationschemas.egg-info/PKG-INFO 2025-06-02T08:19:58,144 writing dependency_links to emannotationschemas.egg-info/dependency_links.txt 2025-06-02T08:19:58,148 writing requirements to emannotationschemas.egg-info/requires.txt 2025-06-02T08:19:58,150 writing top-level names to emannotationschemas.egg-info/top_level.txt 2025-06-02T08:19:58,186 reading manifest file 'emannotationschemas.egg-info/SOURCES.txt' 2025-06-02T08:19:58,191 reading manifest template 'MANIFEST.in' 2025-06-02T08:19:58,192 adding license file 'LICENSE' 2025-06-02T08:19:58,198 writing manifest file 'emannotationschemas.egg-info/SOURCES.txt' 2025-06-02T08:19:58,203 copying emannotationschemas/migrations/alembic.ini -> build/lib/emannotationschemas/migrations 2025-06-02T08:19:58,236 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-06-02T08:19:58,237 !! 2025-06-02T08:19:58,238 ******************************************************************************** 2025-06-02T08:19:58,238 Please avoid running ``setup.py`` directly. 2025-06-02T08:19:58,239 Instead, use pypa/build, pypa/installer or other 2025-06-02T08:19:58,239 standards-based tools. 2025-06-02T08:19:58,240 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-02T08:19:58,241 or your builds will no longer be supported. 2025-06-02T08:19:58,242 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-06-02T08:19:58,243 ******************************************************************************** 2025-06-02T08:19:58,244 !! 2025-06-02T08:19:58,244 self.initialize_options() 2025-06-02T08:19:58,265 installing to build/bdist.linux-armv7l/wheel 2025-06-02T08:19:58,266 running install 2025-06-02T08:19:58,289 running install_lib 2025-06-02T08:19:58,316 creating build/bdist.linux-armv7l/wheel 2025-06-02T08:19:58,319 creating build/bdist.linux-armv7l/wheel/tests 2025-06-02T08:19:58,320 copying build/lib/tests/test_schema_blueprint.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,322 copying build/lib/tests/test_flatten.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,324 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,325 copying build/lib/tests/test_extended_classical_cell_type.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,327 copying build/lib/tests/test_synapse_reference_schema.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,329 copying build/lib/tests/test_derived_spatial_point.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,331 copying build/lib/tests/test_contact.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,333 copying build/lib/tests/test_synapse_schema.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,335 copying build/lib/tests/test_glia_contact.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,337 copying build/lib/tests/test_neuropil.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,338 copying build/lib/tests/conftest.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,340 copying build/lib/tests/test_bouton_shape.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,342 copying build/lib/tests/test_nested.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,344 copying build/lib/tests/test_cell_types.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,345 copying build/lib/tests/test_proofreading_schema.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,347 copying build/lib/tests/test_schema_module.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,349 copying build/lib/tests/test_nucleus_detection.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,350 copying build/lib/tests/test_models.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,352 copying build/lib/tests/test_fly_cell_types.py -> build/bdist.linux-armv7l/wheel/./tests 2025-06-02T08:19:58,355 creating build/bdist.linux-armv7l/wheel/emannotationschemas 2025-06-02T08:19:58,356 copying build/lib/emannotationschemas/flatten.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas 2025-06-02T08:19:58,358 copying build/lib/emannotationschemas/__init__.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas 2025-06-02T08:19:58,360 copying build/lib/emannotationschemas/models.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas 2025-06-02T08:19:58,363 copying build/lib/emannotationschemas/errors.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas 2025-06-02T08:19:58,364 copying build/lib/emannotationschemas/config.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas 2025-06-02T08:19:58,367 creating build/bdist.linux-armv7l/wheel/emannotationschemas/schemas 2025-06-02T08:19:58,368 copying build/lib/emannotationschemas/schemas/cell_type_local.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,370 copying build/lib/emannotationschemas/schemas/bouton_shape.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,372 copying build/lib/emannotationschemas/schemas/bound_text_tag.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,373 copying build/lib/emannotationschemas/schemas/functional_props.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,375 copying build/lib/emannotationschemas/schemas/__init__.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,376 copying build/lib/emannotationschemas/schemas/braincircuits.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,378 copying build/lib/emannotationschemas/schemas/reference_text_float.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,380 copying build/lib/emannotationschemas/schemas/derived_spatial_point.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,382 copying build/lib/emannotationschemas/schemas/glia_contact.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,383 copying build/lib/emannotationschemas/schemas/presynaptic_bouton_type.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,385 copying build/lib/emannotationschemas/schemas/bound_bool_tag.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,387 copying build/lib/emannotationschemas/schemas/neuropil.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,389 copying build/lib/emannotationschemas/schemas/contact.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,390 copying build/lib/emannotationschemas/schemas/postsynaptic_compartment.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,392 copying build/lib/emannotationschemas/schemas/synapse.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,394 copying build/lib/emannotationschemas/schemas/extended_classical_cell_type.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,396 copying build/lib/emannotationschemas/schemas/groups.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,398 copying build/lib/emannotationschemas/schemas/nucleus_detection.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,399 copying build/lib/emannotationschemas/schemas/base.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,402 copying build/lib/emannotationschemas/schemas/proofreading.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,403 copying build/lib/emannotationschemas/schemas/fly_cell_types.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,405 copying build/lib/emannotationschemas/schemas/functional_coregistration.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,407 copying build/lib/emannotationschemas/schemas/categorical_factories.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/schemas 2025-06-02T08:19:58,409 copying build/lib/emannotationschemas/blueprint_app.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas 2025-06-02T08:19:58,411 creating build/bdist.linux-armv7l/wheel/emannotationschemas/migrations 2025-06-02T08:19:58,412 copying build/lib/emannotationschemas/migrations/env.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/migrations 2025-06-02T08:19:58,414 copying build/lib/emannotationschemas/migrations/__init__.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/migrations 2025-06-02T08:19:58,416 creating build/bdist.linux-armv7l/wheel/emannotationschemas/migrations/versions 2025-06-02T08:19:58,417 copying build/lib/emannotationschemas/migrations/versions/__init__.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/migrations/versions 2025-06-02T08:19:58,419 copying build/lib/emannotationschemas/migrations/versions/ad07b1b72351_add_additional_schemas.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/migrations/versions 2025-06-02T08:19:58,421 copying build/lib/emannotationschemas/migrations/versions/bc42c1e4cc1a_base_schemas.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/migrations/versions 2025-06-02T08:19:58,425 copying build/lib/emannotationschemas/migrations/versions/13dffb003203_add_delete_cascade_to_fkeys.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/migrations/versions 2025-06-02T08:19:58,427 copying build/lib/emannotationschemas/migrations/versions/34476f534ca9_add_new_schemas.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/migrations/versions 2025-06-02T08:19:58,429 copying build/lib/emannotationschemas/migrations/run.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas/migrations 2025-06-02T08:19:58,431 copying build/lib/emannotationschemas/migrations/alembic.ini -> build/bdist.linux-armv7l/wheel/./emannotationschemas/migrations 2025-06-02T08:19:58,433 copying build/lib/emannotationschemas/utils.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas 2025-06-02T08:19:58,435 copying build/lib/emannotationschemas/views.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas 2025-06-02T08:19:58,437 copying build/lib/emannotationschemas/app.py -> build/bdist.linux-armv7l/wheel/./emannotationschemas 2025-06-02T08:19:58,439 running install_egg_info 2025-06-02T08:19:58,469 Copying emannotationschemas.egg-info to build/bdist.linux-armv7l/wheel/./emannotationschemas-5.23.0-py3.11.egg-info 2025-06-02T08:19:58,479 running install_scripts 2025-06-02T08:19:58,491 creating build/bdist.linux-armv7l/wheel/emannotationschemas-5.23.0.dist-info/WHEEL 2025-06-02T08:19:58,493 creating '/tmp/pip-wheel-y5_nkqcr/emannotationschemas-5.23.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-06-02T08:19:58,496 adding 'emannotationschemas/__init__.py' 2025-06-02T08:19:58,498 adding 'emannotationschemas/app.py' 2025-06-02T08:19:58,499 adding 'emannotationschemas/blueprint_app.py' 2025-06-02T08:19:58,500 adding 'emannotationschemas/config.py' 2025-06-02T08:19:58,501 adding 'emannotationschemas/errors.py' 2025-06-02T08:19:58,502 adding 'emannotationschemas/flatten.py' 2025-06-02T08:19:58,505 adding 'emannotationschemas/models.py' 2025-06-02T08:19:58,506 adding 'emannotationschemas/utils.py' 2025-06-02T08:19:58,508 adding 'emannotationschemas/views.py' 2025-06-02T08:19:58,509 adding 'emannotationschemas/migrations/__init__.py' 2025-06-02T08:19:58,511 adding 'emannotationschemas/migrations/alembic.ini' 2025-06-02T08:19:58,512 adding 'emannotationschemas/migrations/env.py' 2025-06-02T08:19:58,513 adding 'emannotationschemas/migrations/run.py' 2025-06-02T08:19:58,516 adding 'emannotationschemas/migrations/versions/13dffb003203_add_delete_cascade_to_fkeys.py' 2025-06-02T08:19:58,517 adding 'emannotationschemas/migrations/versions/34476f534ca9_add_new_schemas.py' 2025-06-02T08:19:58,519 adding 'emannotationschemas/migrations/versions/__init__.py' 2025-06-02T08:19:58,520 adding 'emannotationschemas/migrations/versions/ad07b1b72351_add_additional_schemas.py' 2025-06-02T08:19:58,523 adding 'emannotationschemas/migrations/versions/bc42c1e4cc1a_base_schemas.py' 2025-06-02T08:19:58,526 adding 'emannotationschemas/schemas/__init__.py' 2025-06-02T08:19:58,527 adding 'emannotationschemas/schemas/base.py' 2025-06-02T08:19:58,529 adding 'emannotationschemas/schemas/bound_bool_tag.py' 2025-06-02T08:19:58,530 adding 'emannotationschemas/schemas/bound_text_tag.py' 2025-06-02T08:19:58,531 adding 'emannotationschemas/schemas/bouton_shape.py' 2025-06-02T08:19:58,533 adding 'emannotationschemas/schemas/braincircuits.py' 2025-06-02T08:19:58,534 adding 'emannotationschemas/schemas/categorical_factories.py' 2025-06-02T08:19:58,535 adding 'emannotationschemas/schemas/cell_type_local.py' 2025-06-02T08:19:58,537 adding 'emannotationschemas/schemas/contact.py' 2025-06-02T08:19:58,538 adding 'emannotationschemas/schemas/derived_spatial_point.py' 2025-06-02T08:19:58,539 adding 'emannotationschemas/schemas/extended_classical_cell_type.py' 2025-06-02T08:19:58,541 adding 'emannotationschemas/schemas/fly_cell_types.py' 2025-06-02T08:19:58,542 adding 'emannotationschemas/schemas/functional_coregistration.py' 2025-06-02T08:19:58,543 adding 'emannotationschemas/schemas/functional_props.py' 2025-06-02T08:19:58,544 adding 'emannotationschemas/schemas/glia_contact.py' 2025-06-02T08:19:58,545 adding 'emannotationschemas/schemas/groups.py' 2025-06-02T08:19:58,547 adding 'emannotationschemas/schemas/neuropil.py' 2025-06-02T08:19:58,548 adding 'emannotationschemas/schemas/nucleus_detection.py' 2025-06-02T08:19:58,549 adding 'emannotationschemas/schemas/postsynaptic_compartment.py' 2025-06-02T08:19:58,550 adding 'emannotationschemas/schemas/presynaptic_bouton_type.py' 2025-06-02T08:19:58,552 adding 'emannotationschemas/schemas/proofreading.py' 2025-06-02T08:19:58,553 adding 'emannotationschemas/schemas/reference_text_float.py' 2025-06-02T08:19:58,554 adding 'emannotationschemas/schemas/synapse.py' 2025-06-02T08:19:58,557 adding 'emannotationschemas-5.23.0.dist-info/licenses/LICENSE' 2025-06-02T08:19:58,559 adding 'tests/__init__.py' 2025-06-02T08:19:58,560 adding 'tests/conftest.py' 2025-06-02T08:19:58,561 adding 'tests/test_bouton_shape.py' 2025-06-02T08:19:58,562 adding 'tests/test_cell_types.py' 2025-06-02T08:19:58,564 adding 'tests/test_contact.py' 2025-06-02T08:19:58,565 adding 'tests/test_derived_spatial_point.py' 2025-06-02T08:19:58,566 adding 'tests/test_extended_classical_cell_type.py' 2025-06-02T08:19:58,567 adding 'tests/test_flatten.py' 2025-06-02T08:19:58,569 adding 'tests/test_fly_cell_types.py' 2025-06-02T08:19:58,570 adding 'tests/test_glia_contact.py' 2025-06-02T08:19:58,572 adding 'tests/test_models.py' 2025-06-02T08:19:58,573 adding 'tests/test_nested.py' 2025-06-02T08:19:58,574 adding 'tests/test_neuropil.py' 2025-06-02T08:19:58,575 adding 'tests/test_nucleus_detection.py' 2025-06-02T08:19:58,577 adding 'tests/test_proofreading_schema.py' 2025-06-02T08:19:58,578 adding 'tests/test_schema_blueprint.py' 2025-06-02T08:19:58,579 adding 'tests/test_schema_module.py' 2025-06-02T08:19:58,581 adding 'tests/test_synapse_reference_schema.py' 2025-06-02T08:19:58,582 adding 'tests/test_synapse_schema.py' 2025-06-02T08:19:58,583 adding 'emannotationschemas-5.23.0.dist-info/METADATA' 2025-06-02T08:19:58,585 adding 'emannotationschemas-5.23.0.dist-info/WHEEL' 2025-06-02T08:19:58,585 adding 'emannotationschemas-5.23.0.dist-info/top_level.txt' 2025-06-02T08:19:58,587 adding 'emannotationschemas-5.23.0.dist-info/RECORD' 2025-06-02T08:19:58,589 removing build/bdist.linux-armv7l/wheel 2025-06-02T08:19:58,712 Building wheel for emannotationschemas (setup.py): finished with status 'done' 2025-06-02T08:19:58,715 Created wheel for emannotationschemas: filename=emannotationschemas-5.23.0-py3-none-any.whl size=53751 sha256=6de6dabb58b4a6de30b1ff403735fd1311259306e8853e675d18f2ad963ad404 2025-06-02T08:19:58,716 Stored in directory: /tmp/pip-ephem-wheel-cache-zkb0z58w/wheels/e1/10/79/f776494d30be0cd9f3f1622c4f0e9dcc37edc57015dcb24499 2025-06-02T08:19:58,729 Successfully built emannotationschemas 2025-06-02T08:19:58,734 Removed build tracker: '/tmp/pip-build-tracker-gjmct8rb'