2025-06-02T18:08:59,008 Created temporary directory: /tmp/pip-build-tracker-j5kmkclm 2025-06-02T18:08:59,009 Initialized build tracking at /tmp/pip-build-tracker-j5kmkclm 2025-06-02T18:08:59,010 Created build tracker: /tmp/pip-build-tracker-j5kmkclm 2025-06-02T18:08:59,010 Entered build tracker: /tmp/pip-build-tracker-j5kmkclm 2025-06-02T18:08:59,011 Created temporary directory: /tmp/pip-wheel-fml5itqw 2025-06-02T18:08:59,015 Created temporary directory: /tmp/pip-ephem-wheel-cache-s23_hoz9 2025-06-02T18:08:59,064 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-06-02T18:08:59,066 2 location(s) to search for versions of morphomatics: 2025-06-02T18:08:59,066 * https://pypi.org/simple/morphomatics/ 2025-06-02T18:08:59,066 * https://www.piwheels.org/simple/morphomatics/ 2025-06-02T18:08:59,067 Fetching project page and analyzing links: https://pypi.org/simple/morphomatics/ 2025-06-02T18:08:59,068 Getting page https://pypi.org/simple/morphomatics/ 2025-06-02T18:08:59,069 Found index url https://pypi.org/simple/ 2025-06-02T18:08:59,215 Fetched page https://pypi.org/simple/morphomatics/ as application/vnd.pypi.simple.v1+json 2025-06-02T18:08:59,217 Skipping link: No binaries permitted for morphomatics: https://files.pythonhosted.org/packages/68/e3/69076bb3465281e4a84027b73a4b6f243cf2e26ed1637d40536a976b2836/morphomatics-4.0-py3-none-any.whl (from https://pypi.org/simple/morphomatics/) 2025-06-02T18:08:59,217 Found link https://files.pythonhosted.org/packages/66/48/d07ab63086ebd0a2654de1b4d746b650f3041443f6f276768c3cc74c7403/morphomatics-4.0.tar.gz (from https://pypi.org/simple/morphomatics/), version: 4.0 2025-06-02T18:08:59,218 Skipping link: No binaries permitted for morphomatics: https://files.pythonhosted.org/packages/07/b9/9c2a0f675c5928fefd2f6344532858c2518b2a52c10a0cf01459f79c9f16/morphomatics-4.1.1-py3-none-any.whl (from https://pypi.org/simple/morphomatics/) 2025-06-02T18:08:59,218 Found link https://files.pythonhosted.org/packages/4e/3f/a253c08a0927615df880e8aeac6b9f2b11a0fc817772537e03f24861cfe0/morphomatics-4.1.1.tar.gz (from https://pypi.org/simple/morphomatics/), version: 4.1.1 2025-06-02T18:08:59,219 Skipping link: No binaries permitted for morphomatics: https://files.pythonhosted.org/packages/dc/00/403f59a3f4624a65ab2c894da463e739c4fbd39b2bd2e4d630a3d0486e2e/morphomatics-4.1.2-py3-none-any.whl (from https://pypi.org/simple/morphomatics/) 2025-06-02T18:08:59,220 Found link https://files.pythonhosted.org/packages/78/ce/1dbdae368f6c3af689e9537438153303cbc3b1f45c6e1cce9417af77cb13/morphomatics-4.1.2.tar.gz (from https://pypi.org/simple/morphomatics/), version: 4.1.2 2025-06-02T18:08:59,220 Fetching project page and analyzing links: https://www.piwheels.org/simple/morphomatics/ 2025-06-02T18:08:59,221 Getting page https://www.piwheels.org/simple/morphomatics/ 2025-06-02T18:08:59,223 Found index url https://www.piwheels.org/simple/ 2025-06-02T18:08:59,379 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/morphomatics/ 2025-06-02T18:09:00,038 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/morphomatics/ 2025-06-02T18:09:01,205 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/morphomatics/ 2025-06-02T18:09:03,380 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/morphomatics/ 2025-06-02T18:09:07,547 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/morphomatics/ 2025-06-02T18:09:07,721 Could not fetch URL https://www.piwheels.org/simple/morphomatics/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/morphomatics/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-06-02T18:09:07,723 Skipping link: not a file: https://www.piwheels.org/simple/morphomatics/ 2025-06-02T18:09:07,723 Skipping link: not a file: https://pypi.org/simple/morphomatics/ 2025-06-02T18:09:07,744 Given no hashes to check 1 links for project 'morphomatics': discarding no candidates 2025-06-02T18:09:07,745 Collecting morphomatics==4.1.2 2025-06-02T18:09:07,747 Created temporary directory: /tmp/pip-unpack-4u6xa1m3 2025-06-02T18:09:07,970 Downloading morphomatics-4.1.2.tar.gz (86 kB) 2025-06-02T18:09:08,189 Added morphomatics==4.1.2 from https://files.pythonhosted.org/packages/78/ce/1dbdae368f6c3af689e9537438153303cbc3b1f45c6e1cce9417af77cb13/morphomatics-4.1.2.tar.gz to build tracker '/tmp/pip-build-tracker-j5kmkclm' 2025-06-02T18:09:08,192 Running setup.py (path:/tmp/pip-wheel-fml5itqw/morphomatics_941db53ca8e14abbab5d1c0f2dd1c9ee/setup.py) egg_info for package morphomatics 2025-06-02T18:09:08,193 Created temporary directory: /tmp/pip-pip-egg-info-zsdw9fox 2025-06-02T18:09:08,194 Preparing metadata (setup.py): started 2025-06-02T18:09:08,195 Running command python setup.py egg_info 2025-06-02T18:09:08,759 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'version_name' 2025-06-02T18:09:08,759 warnings.warn(msg) 2025-06-02T18:09:09,067 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-06-02T18:09:09,068 !! 2025-06-02T18:09:09,069 ******************************************************************************** 2025-06-02T18:09:09,069 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-06-02T18:09:09,071 License :: OSI Approved :: MIT License 2025-06-02T18:09:09,072 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-06-02T18:09:09,072 ******************************************************************************** 2025-06-02T18:09:09,074 !! 2025-06-02T18:09:09,074 self._finalize_license_expression() 2025-06-02T18:09:09,097 running egg_info 2025-06-02T18:09:09,125 creating /tmp/pip-pip-egg-info-zsdw9fox/morphomatics.egg-info 2025-06-02T18:09:09,126 writing /tmp/pip-pip-egg-info-zsdw9fox/morphomatics.egg-info/PKG-INFO 2025-06-02T18:09:09,130 writing dependency_links to /tmp/pip-pip-egg-info-zsdw9fox/morphomatics.egg-info/dependency_links.txt 2025-06-02T18:09:09,133 writing requirements to /tmp/pip-pip-egg-info-zsdw9fox/morphomatics.egg-info/requires.txt 2025-06-02T18:09:09,134 writing top-level names to /tmp/pip-pip-egg-info-zsdw9fox/morphomatics.egg-info/top_level.txt 2025-06-02T18:09:09,135 writing manifest file '/tmp/pip-pip-egg-info-zsdw9fox/morphomatics.egg-info/SOURCES.txt' 2025-06-02T18:09:09,270 reading manifest file '/tmp/pip-pip-egg-info-zsdw9fox/morphomatics.egg-info/SOURCES.txt' 2025-06-02T18:09:09,272 adding license file 'LICENSE' 2025-06-02T18:09:09,276 writing manifest file '/tmp/pip-pip-egg-info-zsdw9fox/morphomatics.egg-info/SOURCES.txt' 2025-06-02T18:09:09,382 Preparing metadata (setup.py): finished with status 'done' 2025-06-02T18:09:09,385 Source in /tmp/pip-wheel-fml5itqw/morphomatics_941db53ca8e14abbab5d1c0f2dd1c9ee has version 4.1.2, which satisfies requirement morphomatics==4.1.2 from https://files.pythonhosted.org/packages/78/ce/1dbdae368f6c3af689e9537438153303cbc3b1f45c6e1cce9417af77cb13/morphomatics-4.1.2.tar.gz 2025-06-02T18:09:09,386 Removed morphomatics==4.1.2 from https://files.pythonhosted.org/packages/78/ce/1dbdae368f6c3af689e9537438153303cbc3b1f45c6e1cce9417af77cb13/morphomatics-4.1.2.tar.gz from build tracker '/tmp/pip-build-tracker-j5kmkclm' 2025-06-02T18:09:09,392 Created temporary directory: /tmp/pip-unpack-nyht7tki 2025-06-02T18:09:09,393 Created temporary directory: /tmp/pip-unpack-img9qzpc 2025-06-02T18:09:09,394 Building wheels for collected packages: morphomatics 2025-06-02T18:09:09,398 Created temporary directory: /tmp/pip-wheel-pg_row02 2025-06-02T18:09:09,398 DEPRECATION: Building 'morphomatics' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'morphomatics'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-06-02T18:09:09,400 Building wheel for morphomatics (setup.py): started 2025-06-02T18:09:09,401 Destination directory: /tmp/pip-wheel-pg_row02 2025-06-02T18:09:09,401 Running command python setup.py bdist_wheel 2025-06-02T18:09:09,934 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'version_name' 2025-06-02T18:09:09,935 warnings.warn(msg) 2025-06-02T18:09:10,230 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-06-02T18:09:10,230 !! 2025-06-02T18:09:10,231 ******************************************************************************** 2025-06-02T18:09:10,232 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-06-02T18:09:10,233 License :: OSI Approved :: MIT License 2025-06-02T18:09:10,234 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-06-02T18:09:10,235 ******************************************************************************** 2025-06-02T18:09:10,236 !! 2025-06-02T18:09:10,236 self._finalize_license_expression() 2025-06-02T18:09:10,237 running bdist_wheel 2025-06-02T18:09:10,366 running build 2025-06-02T18:09:10,367 running build_py 2025-06-02T18:09:10,397 creating build/lib/morphomatics 2025-06-02T18:09:10,399 copying morphomatics/__init__.py -> build/lib/morphomatics 2025-06-02T18:09:10,402 creating build/lib/morphomatics/correspondence 2025-06-02T18:09:10,403 copying morphomatics/correspondence/laplacian.py -> build/lib/morphomatics/correspondence 2025-06-02T18:09:10,405 copying morphomatics/correspondence/util.py -> build/lib/morphomatics/correspondence 2025-06-02T18:09:10,408 copying morphomatics/correspondence/refine.py -> build/lib/morphomatics/correspondence 2025-06-02T18:09:10,410 copying morphomatics/correspondence/__init__.py -> build/lib/morphomatics/correspondence 2025-06-02T18:09:10,412 copying morphomatics/correspondence/convert.py -> build/lib/morphomatics/correspondence 2025-06-02T18:09:10,414 creating build/lib/morphomatics/geom 2025-06-02T18:09:10,415 copying morphomatics/geom/surface.py -> build/lib/morphomatics/geom 2025-06-02T18:09:10,418 copying morphomatics/geom/misc.py -> build/lib/morphomatics/geom 2025-06-02T18:09:10,420 copying morphomatics/geom/__init__.py -> build/lib/morphomatics/geom 2025-06-02T18:09:10,422 copying morphomatics/geom/bezier_spline.py -> build/lib/morphomatics/geom 2025-06-02T18:09:10,425 creating build/lib/morphomatics/graph 2025-06-02T18:09:10,426 copying morphomatics/graph/operators.py -> build/lib/morphomatics/graph 2025-06-02T18:09:10,429 copying morphomatics/graph/__init__.py -> build/lib/morphomatics/graph 2025-06-02T18:09:10,433 creating build/lib/morphomatics/manifold 2025-06-02T18:09:10,434 copying morphomatics/manifold/tangent_bundle.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,437 copying morphomatics/manifold/differential_coords.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,439 copying morphomatics/manifold/fundamental_coords.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,442 copying morphomatics/manifold/sphere.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,444 copying morphomatics/manifold/connection.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,446 copying morphomatics/manifold/util.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,449 copying morphomatics/manifold/shape_space.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,451 copying morphomatics/manifold/manopt_wrapper.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,453 copying morphomatics/manifold/__init__.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,455 copying morphomatics/manifold/hyperbolic_space.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,458 copying morphomatics/manifold/simplex.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,461 copying morphomatics/manifold/metric.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,463 copying morphomatics/manifold/grassmann.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,465 copying morphomatics/manifold/product_manifold.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,468 copying morphomatics/manifold/cubic_bezierfold.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,471 copying morphomatics/manifold/se_3.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,474 copying morphomatics/manifold/gl_p_coords.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,476 copying morphomatics/manifold/point_distribution_model.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,478 copying morphomatics/manifold/spd.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,481 copying morphomatics/manifold/bezierfold.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,484 copying morphomatics/manifold/euclidean.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,486 copying morphomatics/manifold/gl_p_n.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,489 copying morphomatics/manifold/size_and_shape.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,491 copying morphomatics/manifold/discrete_ops.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,494 copying morphomatics/manifold/kendall.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,496 copying morphomatics/manifold/power_manifold.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,499 copying morphomatics/manifold/so_3.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,502 copying morphomatics/manifold/diffeomorphism.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,504 copying morphomatics/manifold/lie_group.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,507 copying morphomatics/manifold/manifold.py -> build/lib/morphomatics/manifold 2025-06-02T18:09:10,510 creating build/lib/morphomatics/nn 2025-06-02T18:09:10,511 copying morphomatics/nn/train.py -> build/lib/morphomatics/nn 2025-06-02T18:09:10,514 copying morphomatics/nn/euclidean_layers.py -> build/lib/morphomatics/nn 2025-06-02T18:09:10,516 copying morphomatics/nn/wFM_layers.py -> build/lib/morphomatics/nn 2025-06-02T18:09:10,518 copying morphomatics/nn/__init__.py -> build/lib/morphomatics/nn 2025-06-02T18:09:10,520 copying morphomatics/nn/tangent_layers.py -> build/lib/morphomatics/nn 2025-06-02T18:09:10,523 copying morphomatics/nn/flow_layers.py -> build/lib/morphomatics/nn 2025-06-02T18:09:10,526 creating build/lib/morphomatics/opt 2025-06-02T18:09:10,527 copying morphomatics/opt/__init__.py -> build/lib/morphomatics/opt 2025-06-02T18:09:10,530 copying morphomatics/opt/riemannian_newton_raphson.py -> build/lib/morphomatics/opt 2025-06-02T18:09:10,532 copying morphomatics/opt/riemannian_steepest_descent.py -> build/lib/morphomatics/opt 2025-06-02T18:09:10,535 creating build/lib/morphomatics/stats 2025-06-02T18:09:10,536 copying morphomatics/stats/__init__.py -> build/lib/morphomatics/stats 2025-06-02T18:09:10,538 copying morphomatics/stats/principal_geodesic_analysis.py -> build/lib/morphomatics/stats 2025-06-02T18:09:10,540 copying morphomatics/stats/riemannian_regression.py -> build/lib/morphomatics/stats 2025-06-02T18:09:10,543 copying morphomatics/stats/biinvariant_regression.py -> build/lib/morphomatics/stats 2025-06-02T18:09:10,545 copying morphomatics/stats/geometric_median.py -> build/lib/morphomatics/stats 2025-06-02T18:09:10,548 copying morphomatics/stats/biinvariant_dissimilarity_measures.py -> build/lib/morphomatics/stats 2025-06-02T18:09:10,550 copying morphomatics/stats/exponential_barycenter.py -> build/lib/morphomatics/stats 2025-06-02T18:09:10,552 copying morphomatics/stats/statistical_shape_model.py -> build/lib/morphomatics/stats 2025-06-02T18:09:10,593 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-06-02T18:09:10,593 !! 2025-06-02T18:09:10,594 ******************************************************************************** 2025-06-02T18:09:10,595 Please avoid running ``setup.py`` directly. 2025-06-02T18:09:10,595 Instead, use pypa/build, pypa/installer or other 2025-06-02T18:09:10,596 standards-based tools. 2025-06-02T18:09:10,597 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-02T18:09:10,597 or your builds will no longer be supported. 2025-06-02T18:09:10,598 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-06-02T18:09:10,599 ******************************************************************************** 2025-06-02T18:09:10,600 !! 2025-06-02T18:09:10,601 self.initialize_options() 2025-06-02T18:09:10,622 installing to build/bdist.linux-armv7l/wheel 2025-06-02T18:09:10,623 running install 2025-06-02T18:09:10,649 running install_lib 2025-06-02T18:09:10,676 creating build/bdist.linux-armv7l/wheel 2025-06-02T18:09:10,678 creating build/bdist.linux-armv7l/wheel/morphomatics 2025-06-02T18:09:10,679 creating build/bdist.linux-armv7l/wheel/morphomatics/geom 2025-06-02T18:09:10,681 copying build/lib/morphomatics/geom/surface.py -> build/bdist.linux-armv7l/wheel/./morphomatics/geom 2025-06-02T18:09:10,683 copying build/lib/morphomatics/geom/misc.py -> build/bdist.linux-armv7l/wheel/./morphomatics/geom 2025-06-02T18:09:10,685 copying build/lib/morphomatics/geom/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/geom 2025-06-02T18:09:10,687 copying build/lib/morphomatics/geom/bezier_spline.py -> build/bdist.linux-armv7l/wheel/./morphomatics/geom 2025-06-02T18:09:10,690 creating build/bdist.linux-armv7l/wheel/morphomatics/correspondence 2025-06-02T18:09:10,691 copying build/lib/morphomatics/correspondence/laplacian.py -> build/bdist.linux-armv7l/wheel/./morphomatics/correspondence 2025-06-02T18:09:10,693 copying build/lib/morphomatics/correspondence/util.py -> build/bdist.linux-armv7l/wheel/./morphomatics/correspondence 2025-06-02T18:09:10,696 copying build/lib/morphomatics/correspondence/refine.py -> build/bdist.linux-armv7l/wheel/./morphomatics/correspondence 2025-06-02T18:09:10,699 copying build/lib/morphomatics/correspondence/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/correspondence 2025-06-02T18:09:10,701 copying build/lib/morphomatics/correspondence/convert.py -> build/bdist.linux-armv7l/wheel/./morphomatics/correspondence 2025-06-02T18:09:10,704 creating build/bdist.linux-armv7l/wheel/morphomatics/graph 2025-06-02T18:09:10,705 copying build/lib/morphomatics/graph/operators.py -> build/bdist.linux-armv7l/wheel/./morphomatics/graph 2025-06-02T18:09:10,708 copying build/lib/morphomatics/graph/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/graph 2025-06-02T18:09:10,710 creating build/bdist.linux-armv7l/wheel/morphomatics/opt 2025-06-02T18:09:10,712 copying build/lib/morphomatics/opt/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/opt 2025-06-02T18:09:10,714 copying build/lib/morphomatics/opt/riemannian_newton_raphson.py -> build/bdist.linux-armv7l/wheel/./morphomatics/opt 2025-06-02T18:09:10,716 copying build/lib/morphomatics/opt/riemannian_steepest_descent.py -> build/bdist.linux-armv7l/wheel/./morphomatics/opt 2025-06-02T18:09:10,719 creating build/bdist.linux-armv7l/wheel/morphomatics/stats 2025-06-02T18:09:10,720 copying build/lib/morphomatics/stats/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-02T18:09:10,722 copying build/lib/morphomatics/stats/principal_geodesic_analysis.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-02T18:09:10,724 copying build/lib/morphomatics/stats/riemannian_regression.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-02T18:09:10,727 copying build/lib/morphomatics/stats/biinvariant_regression.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-02T18:09:10,729 copying build/lib/morphomatics/stats/geometric_median.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-02T18:09:10,732 copying build/lib/morphomatics/stats/biinvariant_dissimilarity_measures.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-02T18:09:10,734 copying build/lib/morphomatics/stats/exponential_barycenter.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-02T18:09:10,736 copying build/lib/morphomatics/stats/statistical_shape_model.py -> build/bdist.linux-armv7l/wheel/./morphomatics/stats 2025-06-02T18:09:10,738 copying build/lib/morphomatics/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics 2025-06-02T18:09:10,740 creating build/bdist.linux-armv7l/wheel/morphomatics/nn 2025-06-02T18:09:10,742 copying build/lib/morphomatics/nn/train.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-02T18:09:10,744 copying build/lib/morphomatics/nn/euclidean_layers.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-02T18:09:10,746 copying build/lib/morphomatics/nn/wFM_layers.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-02T18:09:10,748 copying build/lib/morphomatics/nn/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-02T18:09:10,750 copying build/lib/morphomatics/nn/tangent_layers.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-02T18:09:10,753 copying build/lib/morphomatics/nn/flow_layers.py -> build/bdist.linux-armv7l/wheel/./morphomatics/nn 2025-06-02T18:09:10,756 creating build/bdist.linux-armv7l/wheel/morphomatics/manifold 2025-06-02T18:09:10,757 copying build/lib/morphomatics/manifold/tangent_bundle.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,760 copying build/lib/morphomatics/manifold/differential_coords.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,763 copying build/lib/morphomatics/manifold/fundamental_coords.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,765 copying build/lib/morphomatics/manifold/sphere.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,768 copying build/lib/morphomatics/manifold/connection.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,770 copying build/lib/morphomatics/manifold/util.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,772 copying build/lib/morphomatics/manifold/shape_space.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,775 copying build/lib/morphomatics/manifold/manopt_wrapper.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,777 copying build/lib/morphomatics/manifold/__init__.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,779 copying build/lib/morphomatics/manifold/hyperbolic_space.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,782 copying build/lib/morphomatics/manifold/simplex.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,784 copying build/lib/morphomatics/manifold/metric.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,786 copying build/lib/morphomatics/manifold/grassmann.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,789 copying build/lib/morphomatics/manifold/product_manifold.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,792 copying build/lib/morphomatics/manifold/cubic_bezierfold.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,794 copying build/lib/morphomatics/manifold/se_3.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,797 copying build/lib/morphomatics/manifold/gl_p_coords.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,799 copying build/lib/morphomatics/manifold/point_distribution_model.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,801 copying build/lib/morphomatics/manifold/spd.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,804 copying build/lib/morphomatics/manifold/bezierfold.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,807 copying build/lib/morphomatics/manifold/euclidean.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,809 copying build/lib/morphomatics/manifold/gl_p_n.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,812 copying build/lib/morphomatics/manifold/size_and_shape.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,815 copying build/lib/morphomatics/manifold/discrete_ops.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,817 copying build/lib/morphomatics/manifold/kendall.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,819 copying build/lib/morphomatics/manifold/power_manifold.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,822 copying build/lib/morphomatics/manifold/so_3.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,825 copying build/lib/morphomatics/manifold/diffeomorphism.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,828 copying build/lib/morphomatics/manifold/lie_group.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,830 copying build/lib/morphomatics/manifold/manifold.py -> build/bdist.linux-armv7l/wheel/./morphomatics/manifold 2025-06-02T18:09:10,832 running install_egg_info 2025-06-02T18:09:10,872 running egg_info 2025-06-02T18:09:10,900 writing morphomatics.egg-info/PKG-INFO 2025-06-02T18:09:10,904 writing dependency_links to morphomatics.egg-info/dependency_links.txt 2025-06-02T18:09:10,906 writing requirements to morphomatics.egg-info/requires.txt 2025-06-02T18:09:10,907 writing top-level names to morphomatics.egg-info/top_level.txt 2025-06-02T18:09:10,946 reading manifest file 'morphomatics.egg-info/SOURCES.txt' 2025-06-02T18:09:10,952 adding license file 'LICENSE' 2025-06-02T18:09:10,957 writing manifest file 'morphomatics.egg-info/SOURCES.txt' 2025-06-02T18:09:10,958 Copying morphomatics.egg-info to build/bdist.linux-armv7l/wheel/./morphomatics-4.1.2-py3.11.egg-info 2025-06-02T18:09:10,968 running install_scripts 2025-06-02T18:09:10,981 creating build/bdist.linux-armv7l/wheel/morphomatics-4.1.2.dist-info/WHEEL 2025-06-02T18:09:10,984 creating '/tmp/pip-wheel-pg_row02/morphomatics-4.1.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-06-02T18:09:10,988 adding 'morphomatics/__init__.py' 2025-06-02T18:09:10,990 adding 'morphomatics/correspondence/__init__.py' 2025-06-02T18:09:10,992 adding 'morphomatics/correspondence/convert.py' 2025-06-02T18:09:10,994 adding 'morphomatics/correspondence/laplacian.py' 2025-06-02T18:09:10,996 adding 'morphomatics/correspondence/refine.py' 2025-06-02T18:09:10,999 adding 'morphomatics/correspondence/util.py' 2025-06-02T18:09:11,001 adding 'morphomatics/geom/__init__.py' 2025-06-02T18:09:11,004 adding 'morphomatics/geom/bezier_spline.py' 2025-06-02T18:09:11,005 adding 'morphomatics/geom/misc.py' 2025-06-02T18:09:11,007 adding 'morphomatics/geom/surface.py' 2025-06-02T18:09:11,009 adding 'morphomatics/graph/__init__.py' 2025-06-02T18:09:11,011 adding 'morphomatics/graph/operators.py' 2025-06-02T18:09:11,013 adding 'morphomatics/manifold/__init__.py' 2025-06-02T18:09:11,016 adding 'morphomatics/manifold/bezierfold.py' 2025-06-02T18:09:11,017 adding 'morphomatics/manifold/connection.py' 2025-06-02T18:09:11,020 adding 'morphomatics/manifold/cubic_bezierfold.py' 2025-06-02T18:09:11,022 adding 'morphomatics/manifold/diffeomorphism.py' 2025-06-02T18:09:11,023 adding 'morphomatics/manifold/differential_coords.py' 2025-06-02T18:09:11,025 adding 'morphomatics/manifold/discrete_ops.py' 2025-06-02T18:09:11,026 adding 'morphomatics/manifold/euclidean.py' 2025-06-02T18:09:11,029 adding 'morphomatics/manifold/fundamental_coords.py' 2025-06-02T18:09:11,031 adding 'morphomatics/manifold/gl_p_coords.py' 2025-06-02T18:09:11,032 adding 'morphomatics/manifold/gl_p_n.py' 2025-06-02T18:09:11,034 adding 'morphomatics/manifold/grassmann.py' 2025-06-02T18:09:11,036 adding 'morphomatics/manifold/hyperbolic_space.py' 2025-06-02T18:09:11,038 adding 'morphomatics/manifold/kendall.py' 2025-06-02T18:09:11,040 adding 'morphomatics/manifold/lie_group.py' 2025-06-02T18:09:11,041 adding 'morphomatics/manifold/manifold.py' 2025-06-02T18:09:11,043 adding 'morphomatics/manifold/manopt_wrapper.py' 2025-06-02T18:09:11,044 adding 'morphomatics/manifold/metric.py' 2025-06-02T18:09:11,046 adding 'morphomatics/manifold/point_distribution_model.py' 2025-06-02T18:09:11,048 adding 'morphomatics/manifold/power_manifold.py' 2025-06-02T18:09:11,050 adding 'morphomatics/manifold/product_manifold.py' 2025-06-02T18:09:11,052 adding 'morphomatics/manifold/se_3.py' 2025-06-02T18:09:11,054 adding 'morphomatics/manifold/shape_space.py' 2025-06-02T18:09:11,055 adding 'morphomatics/manifold/simplex.py' 2025-06-02T18:09:11,057 adding 'morphomatics/manifold/size_and_shape.py' 2025-06-02T18:09:11,059 adding 'morphomatics/manifold/so_3.py' 2025-06-02T18:09:11,062 adding 'morphomatics/manifold/spd.py' 2025-06-02T18:09:11,064 adding 'morphomatics/manifold/sphere.py' 2025-06-02T18:09:11,067 adding 'morphomatics/manifold/tangent_bundle.py' 2025-06-02T18:09:11,068 adding 'morphomatics/manifold/util.py' 2025-06-02T18:09:11,070 adding 'morphomatics/nn/__init__.py' 2025-06-02T18:09:11,072 adding 'morphomatics/nn/euclidean_layers.py' 2025-06-02T18:09:11,074 adding 'morphomatics/nn/flow_layers.py' 2025-06-02T18:09:11,075 adding 'morphomatics/nn/tangent_layers.py' 2025-06-02T18:09:11,077 adding 'morphomatics/nn/train.py' 2025-06-02T18:09:11,079 adding 'morphomatics/nn/wFM_layers.py' 2025-06-02T18:09:11,081 adding 'morphomatics/opt/__init__.py' 2025-06-02T18:09:11,082 adding 'morphomatics/opt/riemannian_newton_raphson.py' 2025-06-02T18:09:11,084 adding 'morphomatics/opt/riemannian_steepest_descent.py' 2025-06-02T18:09:11,086 adding 'morphomatics/stats/__init__.py' 2025-06-02T18:09:11,088 adding 'morphomatics/stats/biinvariant_dissimilarity_measures.py' 2025-06-02T18:09:11,090 adding 'morphomatics/stats/biinvariant_regression.py' 2025-06-02T18:09:11,091 adding 'morphomatics/stats/exponential_barycenter.py' 2025-06-02T18:09:11,093 adding 'morphomatics/stats/geometric_median.py' 2025-06-02T18:09:11,095 adding 'morphomatics/stats/principal_geodesic_analysis.py' 2025-06-02T18:09:11,097 adding 'morphomatics/stats/riemannian_regression.py' 2025-06-02T18:09:11,098 adding 'morphomatics/stats/statistical_shape_model.py' 2025-06-02T18:09:11,101 adding 'morphomatics-4.1.2.dist-info/licenses/LICENSE' 2025-06-02T18:09:11,102 adding 'morphomatics-4.1.2.dist-info/METADATA' 2025-06-02T18:09:11,103 adding 'morphomatics-4.1.2.dist-info/WHEEL' 2025-06-02T18:09:11,104 adding 'morphomatics-4.1.2.dist-info/top_level.txt' 2025-06-02T18:09:11,106 adding 'morphomatics-4.1.2.dist-info/RECORD' 2025-06-02T18:09:11,109 removing build/bdist.linux-armv7l/wheel 2025-06-02T18:09:11,238 Building wheel for morphomatics (setup.py): finished with status 'done' 2025-06-02T18:09:11,242 Created wheel for morphomatics: filename=morphomatics-4.1.2-py3-none-any.whl size=129744 sha256=fb560fa87bfe4c104cc587bfcdce6e118ccaa0aef375b326228add3c9171d0e5 2025-06-02T18:09:11,243 Stored in directory: /tmp/pip-ephem-wheel-cache-s23_hoz9/wheels/28/97/2e/e70c2b298bc8496904209f6dda50ffafc561f7ac193a257551 2025-06-02T18:09:11,255 Successfully built morphomatics 2025-06-02T18:09:11,262 Removed build tracker: '/tmp/pip-build-tracker-j5kmkclm'