2025-06-02T18:35:22,139 Created temporary directory: /tmp/pip-build-tracker-yizs8r61
2025-06-02T18:35:22,140 Initialized build tracking at /tmp/pip-build-tracker-yizs8r61
2025-06-02T18:35:22,140 Created build tracker: /tmp/pip-build-tracker-yizs8r61
2025-06-02T18:35:22,141 Entered build tracker: /tmp/pip-build-tracker-yizs8r61
2025-06-02T18:35:22,142 Created temporary directory: /tmp/pip-wheel-5myui3ax
2025-06-02T18:35:22,146 Created temporary directory: /tmp/pip-ephem-wheel-cache-va31sb9z
2025-06-02T18:35:22,198 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-06-02T18:35:22,201 2 location(s) to search for versions of pyxplore:
2025-06-02T18:35:22,201 * https://pypi.org/simple/pyxplore/
2025-06-02T18:35:22,201 * https://www.piwheels.org/simple/pyxplore/
2025-06-02T18:35:22,201 Fetching project page and analyzing links: https://pypi.org/simple/pyxplore/
2025-06-02T18:35:22,202 Getting page https://pypi.org/simple/pyxplore/
2025-06-02T18:35:22,204 Found index url https://pypi.org/simple/
2025-06-02T18:35:22,350 Fetched page https://pypi.org/simple/pyxplore/ as application/vnd.pypi.simple.v1+json
2025-06-02T18:35:22,351   Skipping link: No binaries permitted for pyxplore: https://files.pythonhosted.org/packages/64/ca/9da38560a91e91a9bee18edaac6f8b31342a8806c085e250e23101ef4fb6/PyXplore-2025.6.10-py3-none-any.whl (from https://pypi.org/simple/pyxplore/) (requires-python:>=3.6)
2025-06-02T18:35:22,353   Found link https://files.pythonhosted.org/packages/e2/c9/17b3f9bf9f96d5893d22e1eeec75efd9194b29cadd1941fa549ff10afbed/pyxplore-2025.6.10.tar.gz (from https://pypi.org/simple/pyxplore/) (requires-python:>=3.6), version: 2025.6.10
2025-06-02T18:35:22,353   Skipping link: No binaries permitted for pyxplore: https://files.pythonhosted.org/packages/f5/84/fb8631ed7444d9f069b07757ed54991c61b4f310af1b2eb33254598acc71/PyXplore-2025.7.21-py3-none-any.whl (from https://pypi.org/simple/pyxplore/) (requires-python:>=3.6)
2025-06-02T18:35:22,354   Found link https://files.pythonhosted.org/packages/5a/43/93eb7d8bc5914608c954758485d54a461fb4813e15cc2aa09b1c78073e0d/pyxplore-2025.7.21.tar.gz (from https://pypi.org/simple/pyxplore/) (requires-python:>=3.6), version: 2025.7.21
2025-06-02T18:35:22,355 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyxplore/
2025-06-02T18:35:22,356 Getting page https://www.piwheels.org/simple/pyxplore/
2025-06-02T18:35:22,357 Found index url https://www.piwheels.org/simple/
2025-06-02T18:35:22,532 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/pyxplore/
2025-06-02T18:35:23,197 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/pyxplore/
2025-06-02T18:35:24,380 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/pyxplore/
2025-06-02T18:35:26,561 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/pyxplore/
2025-06-02T18:35:30,737 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/pyxplore/
2025-06-02T18:35:30,903 Could not fetch URL https://www.piwheels.org/simple/pyxplore/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/pyxplore/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping
2025-06-02T18:35:30,906 Skipping link: not a file: https://www.piwheels.org/simple/pyxplore/
2025-06-02T18:35:30,906 Skipping link: not a file: https://pypi.org/simple/pyxplore/
2025-06-02T18:35:30,928 Given no hashes to check 1 links for project 'pyxplore': discarding no candidates
2025-06-02T18:35:30,930 Collecting pyxplore==2025.7.21
2025-06-02T18:35:30,932   Created temporary directory: /tmp/pip-unpack-jiwxhqap
2025-06-02T18:35:31,171   Downloading pyxplore-2025.7.21.tar.gz (8.2 MB)
2025-06-02T18:35:32,879   Added pyxplore==2025.7.21 from https://files.pythonhosted.org/packages/5a/43/93eb7d8bc5914608c954758485d54a461fb4813e15cc2aa09b1c78073e0d/pyxplore-2025.7.21.tar.gz to build tracker '/tmp/pip-build-tracker-yizs8r61'
2025-06-02T18:35:32,881   Running setup.py (path:/tmp/pip-wheel-5myui3ax/pyxplore_ef1aed7758914dfc8582ab0c7c31779f/setup.py) egg_info for package pyxplore
2025-06-02T18:35:32,882   Created temporary directory: /tmp/pip-pip-egg-info-8kr81_pz
2025-06-02T18:35:32,883   Preparing metadata (setup.py): started
2025-06-02T18:35:32,884   Running command python setup.py egg_info
2025-06-02T18:35:33,766   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '2025.07.21' to '2025.7.21'
2025-06-02T18:35:33,766     self.metadata.version = self._normalize_version(self.metadata.version)
2025-06-02T18:35:33,768   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-02T18:35:33,768   !!

2025-06-02T18:35:33,769           ********************************************************************************
2025-06-02T18:35:33,770           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-02T18:35:33,771           License :: OSI Approved :: MIT License

2025-06-02T18:35:33,772           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-02T18:35:33,773           ********************************************************************************

2025-06-02T18:35:33,774   !!
2025-06-02T18:35:33,775     self._finalize_license_expression()
2025-06-02T18:35:33,797   running egg_info
2025-06-02T18:35:33,825   creating /tmp/pip-pip-egg-info-8kr81_pz/PyXplore.egg-info
2025-06-02T18:35:33,826   writing /tmp/pip-pip-egg-info-8kr81_pz/PyXplore.egg-info/PKG-INFO
2025-06-02T18:35:33,829   writing dependency_links to /tmp/pip-pip-egg-info-8kr81_pz/PyXplore.egg-info/dependency_links.txt
2025-06-02T18:35:33,831   writing requirements to /tmp/pip-pip-egg-info-8kr81_pz/PyXplore.egg-info/requires.txt
2025-06-02T18:35:33,832   writing top-level names to /tmp/pip-pip-egg-info-8kr81_pz/PyXplore.egg-info/top_level.txt
2025-06-02T18:35:33,833   writing manifest file '/tmp/pip-pip-egg-info-8kr81_pz/PyXplore.egg-info/SOURCES.txt'
2025-06-02T18:35:33,970   reading manifest file '/tmp/pip-pip-egg-info-8kr81_pz/PyXplore.egg-info/SOURCES.txt'
2025-06-02T18:35:33,976   writing manifest file '/tmp/pip-pip-egg-info-8kr81_pz/PyXplore.egg-info/SOURCES.txt'
2025-06-02T18:35:34,079   Preparing metadata (setup.py): finished with status 'done'
2025-06-02T18:35:34,083   Source in /tmp/pip-wheel-5myui3ax/pyxplore_ef1aed7758914dfc8582ab0c7c31779f has version 2025.7.21, which satisfies requirement pyxplore==2025.7.21 from https://files.pythonhosted.org/packages/5a/43/93eb7d8bc5914608c954758485d54a461fb4813e15cc2aa09b1c78073e0d/pyxplore-2025.7.21.tar.gz
2025-06-02T18:35:34,084   Removed pyxplore==2025.7.21 from https://files.pythonhosted.org/packages/5a/43/93eb7d8bc5914608c954758485d54a461fb4813e15cc2aa09b1c78073e0d/pyxplore-2025.7.21.tar.gz from build tracker '/tmp/pip-build-tracker-yizs8r61'
2025-06-02T18:35:34,090 Created temporary directory: /tmp/pip-unpack-9382jf3i
2025-06-02T18:35:34,091 Created temporary directory: /tmp/pip-unpack-x5rgz6db
2025-06-02T18:35:34,092 Building wheels for collected packages: pyxplore
2025-06-02T18:35:34,096   Created temporary directory: /tmp/pip-wheel-rjns3i87
2025-06-02T18:35:34,097   DEPRECATION: Building 'pyxplore' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'pyxplore'. Discussion can be found at https://github.com/pypa/pip/issues/6334
2025-06-02T18:35:34,098   Building wheel for pyxplore (setup.py): started
2025-06-02T18:35:34,099   Destination directory: /tmp/pip-wheel-rjns3i87
2025-06-02T18:35:34,099   Running command python setup.py bdist_wheel
2025-06-02T18:35:34,942   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '2025.07.21' to '2025.7.21'
2025-06-02T18:35:34,943     self.metadata.version = self._normalize_version(self.metadata.version)
2025-06-02T18:35:34,945   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-06-02T18:35:34,945   !!

2025-06-02T18:35:34,946           ********************************************************************************
2025-06-02T18:35:34,946           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-06-02T18:35:34,947           License :: OSI Approved :: MIT License

2025-06-02T18:35:34,949           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-06-02T18:35:34,949           ********************************************************************************

2025-06-02T18:35:34,950   !!
2025-06-02T18:35:34,951     self._finalize_license_expression()
2025-06-02T18:35:34,952   running bdist_wheel
2025-06-02T18:35:35,082   running build
2025-06-02T18:35:35,083   running build_py
2025-06-02T18:35:35,113   creating build/lib/PyXplore
2025-06-02T18:35:35,115   copying PyXplore/__init__.py -> build/lib/PyXplore
2025-06-02T18:35:35,117   copying PyXplore/WPEM.py -> build/lib/PyXplore
2025-06-02T18:35:35,120   creating build/lib/PyXplore/WPEMXPS
2025-06-02T18:35:35,122   copying PyXplore/WPEMXPS/__init__.py -> build/lib/PyXplore/WPEMXPS
2025-06-02T18:35:35,124   copying PyXplore/WPEMXPS/XPSEM.py -> build/lib/PyXplore/WPEMXPS
2025-06-02T18:35:35,127   creating build/lib/PyXplore/Amorphous
2025-06-02T18:35:35,128   copying PyXplore/Amorphous/__init__.py -> build/lib/PyXplore/Amorphous
2025-06-02T18:35:35,130   creating build/lib/PyXplore/WPEMXAS
2025-06-02T18:35:35,131   copying PyXplore/WPEMXAS/__init__.py -> build/lib/PyXplore/WPEMXAS
2025-06-02T18:35:35,133   copying PyXplore/WPEMXAS/EXAFS.py -> build/lib/PyXplore/WPEMXAS
2025-06-02T18:35:35,136   creating build/lib/PyXplore/DecomposePlot
2025-06-02T18:35:35,137   copying PyXplore/DecomposePlot/__init__.py -> build/lib/PyXplore/DecomposePlot
2025-06-02T18:35:35,139   copying PyXplore/DecomposePlot/plot.py -> build/lib/PyXplore/DecomposePlot
2025-06-02T18:35:35,142   creating build/lib/PyXplore/GraphStructure
2025-06-02T18:35:35,143   copying PyXplore/GraphStructure/__init__.py -> build/lib/PyXplore/GraphStructure
2025-06-02T18:35:35,146   copying PyXplore/GraphStructure/graph.py -> build/lib/PyXplore/GraphStructure
2025-06-02T18:35:35,149   creating build/lib/PyXplore/Background
2025-06-02T18:35:35,150   copying PyXplore/Background/__init__.py -> build/lib/PyXplore/Background
2025-06-02T18:35:35,152   copying PyXplore/Background/BacDeduct.py -> build/lib/PyXplore/Background
2025-06-02T18:35:35,156   creating build/lib/PyXplore/Extinction
2025-06-02T18:35:35,157   copying PyXplore/Extinction/Relaxer.py -> build/lib/PyXplore/Extinction
2025-06-02T18:35:35,159   copying PyXplore/Extinction/CifReader.py -> build/lib/PyXplore/Extinction
2025-06-02T18:35:35,162   copying PyXplore/Extinction/__init__.py -> build/lib/PyXplore/Extinction
2025-06-02T18:35:35,164   copying PyXplore/Extinction/XRDpre.py -> build/lib/PyXplore/Extinction
2025-06-02T18:35:35,167   creating build/lib/PyXplore/XRDSimulation
2025-06-02T18:35:35,168   copying PyXplore/XRDSimulation/__init__.py -> build/lib/PyXplore/XRDSimulation
2025-06-02T18:35:35,170   copying PyXplore/XRDSimulation/Simulation.py -> build/lib/PyXplore/XRDSimulation
2025-06-02T18:35:35,174   creating build/lib/PyXplore/Plot
2025-06-02T18:35:35,175   copying PyXplore/Plot/__init__.py -> build/lib/PyXplore/Plot
2025-06-02T18:35:35,177   copying PyXplore/Plot/UnitCell.py -> build/lib/PyXplore/Plot
2025-06-02T18:35:35,180   creating build/lib/PyXplore/StructureOpt
2025-06-02T18:35:35,181   copying PyXplore/StructureOpt/__init__.py -> build/lib/PyXplore/StructureOpt
2025-06-02T18:35:35,183   copying PyXplore/StructureOpt/SiteOpt.py -> build/lib/PyXplore/StructureOpt
2025-06-02T18:35:35,186   creating build/lib/PyXplore/Refinement
2025-06-02T18:35:35,187   copying PyXplore/Refinement/VolumeFractionDertermination.py -> build/lib/PyXplore/Refinement
2025-06-02T18:35:35,190   copying PyXplore/Refinement/__init__.py -> build/lib/PyXplore/Refinement
2025-06-02T18:35:35,193   creating build/lib/PyXplore/EMBraggOpt
2025-06-02T18:35:35,194   copying PyXplore/EMBraggOpt/__init__.py -> build/lib/PyXplore/EMBraggOpt
2025-06-02T18:35:35,196   copying PyXplore/EMBraggOpt/EMBraggSolver.py -> build/lib/PyXplore/EMBraggOpt
2025-06-02T18:35:35,199   copying PyXplore/EMBraggOpt/BraggLawDerivation.py -> build/lib/PyXplore/EMBraggOpt
2025-06-02T18:35:35,203   creating build/lib/PyXplore/Amorphous/QuantitativeCalculation
2025-06-02T18:35:35,204   copying PyXplore/Amorphous/QuantitativeCalculation/AmorphousRDF.py -> build/lib/PyXplore/Amorphous/QuantitativeCalculation
2025-06-02T18:35:35,207   copying PyXplore/Amorphous/QuantitativeCalculation/__init__.py -> build/lib/PyXplore/Amorphous/QuantitativeCalculation
2025-06-02T18:35:35,209   creating build/lib/PyXplore/Amorphous/fitting
2025-06-02T18:35:35,211   copying PyXplore/Amorphous/fitting/__init__.py -> build/lib/PyXplore/Amorphous/fitting
2025-06-02T18:35:35,213   copying PyXplore/Amorphous/fitting/AmorphousFitting.py -> build/lib/PyXplore/Amorphous/fitting
2025-06-02T18:35:35,216   creating build/lib/PyXplore/Extinction/wyckoff
2025-06-02T18:35:35,217   copying PyXplore/Extinction/wyckoff/__init__.py -> build/lib/PyXplore/Extinction/wyckoff
2025-06-02T18:35:35,219   copying PyXplore/Extinction/wyckoff/wyckoff_dict.py -> build/lib/PyXplore/Extinction/wyckoff
2025-06-02T18:35:35,235   creating build/lib/PyXplore/Extinction/m3gnet
2025-06-02T18:35:35,236   copying PyXplore/Extinction/m3gnet/__init__.py -> build/lib/PyXplore/Extinction/m3gnet
2025-06-02T18:35:35,239   copying PyXplore/Extinction/m3gnet/cli.py -> build/lib/PyXplore/Extinction/m3gnet
2025-06-02T18:35:35,241   copying PyXplore/Extinction/m3gnet/config.py -> build/lib/PyXplore/Extinction/m3gnet
2025-06-02T18:35:35,244   copying PyXplore/Extinction/m3gnet/type.py -> build/lib/PyXplore/Extinction/m3gnet
2025-06-02T18:35:35,246   copying PyXplore/Extinction/m3gnet/callbacks.py -> build/lib/PyXplore/Extinction/m3gnet
2025-06-02T18:35:35,249   creating build/lib/PyXplore/Extinction/m3gnet/utils
2025-06-02T18:35:35,251   copying PyXplore/Extinction/m3gnet/utils/__init__.py -> build/lib/PyXplore/Extinction/m3gnet/utils
2025-06-02T18:35:35,253   copying PyXplore/Extinction/m3gnet/utils/_tf.py -> build/lib/PyXplore/Extinction/m3gnet/utils
2025-06-02T18:35:35,255   copying PyXplore/Extinction/m3gnet/utils/_general.py -> build/lib/PyXplore/Extinction/m3gnet/utils
2025-06-02T18:35:35,258   copying PyXplore/Extinction/m3gnet/utils/_math.py -> build/lib/PyXplore/Extinction/m3gnet/utils
2025-06-02T18:35:35,261   creating build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,263   copying PyXplore/Extinction/m3gnet/layers/_readout.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,265   copying PyXplore/Extinction/m3gnet/layers/__init__.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,268   copying PyXplore/Extinction/m3gnet/layers/_core.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,271   copying PyXplore/Extinction/m3gnet/layers/_bond.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,273   copying PyXplore/Extinction/m3gnet/layers/_aggregate.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,276   copying PyXplore/Extinction/m3gnet/layers/_three_body.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,278   copying PyXplore/Extinction/m3gnet/layers/_two_body.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,280   copying PyXplore/Extinction/m3gnet/layers/_atom_ref.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,283   copying PyXplore/Extinction/m3gnet/layers/_base.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,285   copying PyXplore/Extinction/m3gnet/layers/_gn.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,288   copying PyXplore/Extinction/m3gnet/layers/_basis.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,291   copying PyXplore/Extinction/m3gnet/layers/_state.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,293   copying PyXplore/Extinction/m3gnet/layers/_atom.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,295   copying PyXplore/Extinction/m3gnet/layers/_cutoff.py -> build/lib/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:35,298   creating build/lib/PyXplore/Extinction/m3gnet/models
2025-06-02T18:35:35,300   copying PyXplore/Extinction/m3gnet/models/__init__.py -> build/lib/PyXplore/Extinction/m3gnet/models
2025-06-02T18:35:35,302   copying PyXplore/Extinction/m3gnet/models/_m3gnet.py -> build/lib/PyXplore/Extinction/m3gnet/models
2025-06-02T18:35:35,305   copying PyXplore/Extinction/m3gnet/models/_base.py -> build/lib/PyXplore/Extinction/m3gnet/models
2025-06-02T18:35:35,308   copying PyXplore/Extinction/m3gnet/models/_dynamics.py -> build/lib/PyXplore/Extinction/m3gnet/models
2025-06-02T18:35:35,311   creating build/lib/PyXplore/Extinction/m3gnet/trainers
2025-06-02T18:35:35,313   copying PyXplore/Extinction/m3gnet/trainers/_property.py -> build/lib/PyXplore/Extinction/m3gnet/trainers
2025-06-02T18:35:35,316   copying PyXplore/Extinction/m3gnet/trainers/__init__.py -> build/lib/PyXplore/Extinction/m3gnet/trainers
2025-06-02T18:35:35,318   copying PyXplore/Extinction/m3gnet/trainers/_potential.py -> build/lib/PyXplore/Extinction/m3gnet/trainers
2025-06-02T18:35:35,321   copying PyXplore/Extinction/m3gnet/trainers/_metrics.py -> build/lib/PyXplore/Extinction/m3gnet/trainers
2025-06-02T18:35:35,324   creating build/lib/PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:35,325   copying PyXplore/Extinction/m3gnet/graph/_converters.py -> build/lib/PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:35,328   copying PyXplore/Extinction/m3gnet/graph/__init__.py -> build/lib/PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:35,330   copying PyXplore/Extinction/m3gnet/graph/_compute.py -> build/lib/PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:35,333   copying PyXplore/Extinction/m3gnet/graph/_batch.py -> build/lib/PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:35,336   copying PyXplore/Extinction/m3gnet/graph/_types.py -> build/lib/PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:35,339   copying PyXplore/Extinction/m3gnet/graph/_structure.py -> build/lib/PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:35,342   creating build/lib/PyXplore/XRDSimulation/DiffractionGrometry
2025-06-02T18:35:35,344   copying PyXplore/XRDSimulation/DiffractionGrometry/__init__.py -> build/lib/PyXplore/XRDSimulation/DiffractionGrometry
2025-06-02T18:35:35,347   copying PyXplore/XRDSimulation/DiffractionGrometry/atom.py -> build/lib/PyXplore/XRDSimulation/DiffractionGrometry
2025-06-02T18:35:35,351   creating build/lib/PyXplore/EMBraggOpt/WPEMFuns
2025-06-02T18:35:35,352   copying PyXplore/EMBraggOpt/WPEMFuns/__init__.py -> build/lib/PyXplore/EMBraggOpt/WPEMFuns
2025-06-02T18:35:35,355   copying PyXplore/EMBraggOpt/WPEMFuns/SolverFuns.py -> build/lib/PyXplore/EMBraggOpt/WPEMFuns
2025-06-02T18:35:35,358   running egg_info
2025-06-02T18:35:35,389   writing PyXplore.egg-info/PKG-INFO
2025-06-02T18:35:35,392   writing dependency_links to PyXplore.egg-info/dependency_links.txt
2025-06-02T18:35:35,394   writing requirements to PyXplore.egg-info/requires.txt
2025-06-02T18:35:35,396   writing top-level names to PyXplore.egg-info/top_level.txt
2025-06-02T18:35:35,472   reading manifest file 'PyXplore.egg-info/SOURCES.txt'
2025-06-02T18:35:35,485   writing manifest file 'PyXplore.egg-info/SOURCES.txt'
2025-06-02T18:35:35,488   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'PyXplore.refs' is absent from the `packages` configuration.
2025-06-02T18:35:35,488   !!

2025-06-02T18:35:35,489           ********************************************************************************
2025-06-02T18:35:35,490           ############################
2025-06-02T18:35:35,490           # Package would be ignored #
2025-06-02T18:35:35,491           ############################
2025-06-02T18:35:35,491           Python recognizes 'PyXplore.refs' as an importable package[^1],
2025-06-02T18:35:35,492           but it is absent from setuptools' `packages` configuration.

2025-06-02T18:35:35,492           This leads to an ambiguous overall configuration. If you want to distribute this
2025-06-02T18:35:35,493           package, please make sure that 'PyXplore.refs' is explicitly added
2025-06-02T18:35:35,493           to the `packages` configuration field.

2025-06-02T18:35:35,494           Alternatively, you can also rely on setuptools' discovery methods
2025-06-02T18:35:35,495           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2025-06-02T18:35:35,495           instead of `find_packages(...)`/`find:`).

2025-06-02T18:35:35,497           You can read more about "package discovery" on setuptools documentation page:

2025-06-02T18:35:35,498           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2025-06-02T18:35:35,499           If you don't want 'PyXplore.refs' to be distributed and are
2025-06-02T18:35:35,500           already explicitly excluding 'PyXplore.refs' via
2025-06-02T18:35:35,500           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2025-06-02T18:35:35,501           you can try to use `exclude_package_data`, or `include-package-data=False` in
2025-06-02T18:35:35,501           combination with a more fine grained `package-data` configuration.

2025-06-02T18:35:35,502           You can read more about "package data files" on setuptools documentation page:

2025-06-02T18:35:35,503           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2025-06-02T18:35:35,505           [^1]: For Python, any directory (with suitable naming) can be imported,
2025-06-02T18:35:35,505                 even if it does not contain any `.py` files.
2025-06-02T18:35:35,506                 On the other hand, currently there is no concept of package data
2025-06-02T18:35:35,506                 directory, all directories are treated like packages.
2025-06-02T18:35:35,507           ********************************************************************************

2025-06-02T18:35:35,508   !!
2025-06-02T18:35:35,509     check.warn(importable)
2025-06-02T18:35:35,528   creating build/lib/PyXplore/refs
2025-06-02T18:35:35,529   copying PyXplore/refs/International_Union_of_Crystallography.pdf -> build/lib/PyXplore/refs
2025-06-02T18:35:35,986   copying PyXplore/refs/WPEM_Manual.pdf -> build/lib/PyXplore/refs
2025-06-02T18:35:36,026   copying PyXplore/WPEMXAS/fftdemo.ipynb -> build/lib/PyXplore/WPEMXAS
2025-06-02T18:35:36,071   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2025-06-02T18:35:36,072   !!

2025-06-02T18:35:36,073           ********************************************************************************
2025-06-02T18:35:36,074           Please avoid running ``setup.py`` directly.
2025-06-02T18:35:36,075           Instead, use pypa/build, pypa/installer or other
2025-06-02T18:35:36,075           standards-based tools.

2025-06-02T18:35:36,076           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-06-02T18:35:36,076           or your builds will no longer be supported.

2025-06-02T18:35:36,077           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2025-06-02T18:35:36,078           ********************************************************************************

2025-06-02T18:35:36,079   !!
2025-06-02T18:35:36,079     self.initialize_options()
2025-06-02T18:35:36,100   installing to build/bdist.linux-armv7l/wheel
2025-06-02T18:35:36,101   running install
2025-06-02T18:35:36,126   running install_lib
2025-06-02T18:35:36,153   creating build/bdist.linux-armv7l/wheel
2025-06-02T18:35:36,155   creating build/bdist.linux-armv7l/wheel/PyXplore
2025-06-02T18:35:36,157   creating build/bdist.linux-armv7l/wheel/PyXplore/WPEMXPS
2025-06-02T18:35:36,158   copying build/lib/PyXplore/WPEMXPS/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/WPEMXPS
2025-06-02T18:35:36,160   copying build/lib/PyXplore/WPEMXPS/XPSEM.py -> build/bdist.linux-armv7l/wheel/./PyXplore/WPEMXPS
2025-06-02T18:35:36,164   creating build/bdist.linux-armv7l/wheel/PyXplore/Amorphous
2025-06-02T18:35:36,165   copying build/lib/PyXplore/Amorphous/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Amorphous
2025-06-02T18:35:36,167   creating build/bdist.linux-armv7l/wheel/PyXplore/Amorphous/QuantitativeCalculation
2025-06-02T18:35:36,168   copying build/lib/PyXplore/Amorphous/QuantitativeCalculation/AmorphousRDF.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Amorphous/QuantitativeCalculation
2025-06-02T18:35:36,171   copying build/lib/PyXplore/Amorphous/QuantitativeCalculation/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Amorphous/QuantitativeCalculation
2025-06-02T18:35:36,174   creating build/bdist.linux-armv7l/wheel/PyXplore/Amorphous/fitting
2025-06-02T18:35:36,175   copying build/lib/PyXplore/Amorphous/fitting/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Amorphous/fitting
2025-06-02T18:35:36,177   copying build/lib/PyXplore/Amorphous/fitting/AmorphousFitting.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Amorphous/fitting
2025-06-02T18:35:36,179   copying build/lib/PyXplore/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore
2025-06-02T18:35:36,182   creating build/bdist.linux-armv7l/wheel/PyXplore/refs
2025-06-02T18:35:36,183   copying build/lib/PyXplore/refs/International_Union_of_Crystallography.pdf -> build/bdist.linux-armv7l/wheel/./PyXplore/refs
2025-06-02T18:35:36,305   copying build/lib/PyXplore/refs/WPEM_Manual.pdf -> build/bdist.linux-armv7l/wheel/./PyXplore/refs
2025-06-02T18:35:36,362   creating build/bdist.linux-armv7l/wheel/PyXplore/WPEMXAS
2025-06-02T18:35:36,363   copying build/lib/PyXplore/WPEMXAS/fftdemo.ipynb -> build/bdist.linux-armv7l/wheel/./PyXplore/WPEMXAS
2025-06-02T18:35:36,370   copying build/lib/PyXplore/WPEMXAS/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/WPEMXAS
2025-06-02T18:35:36,372   copying build/lib/PyXplore/WPEMXAS/EXAFS.py -> build/bdist.linux-armv7l/wheel/./PyXplore/WPEMXAS
2025-06-02T18:35:36,375   creating build/bdist.linux-armv7l/wheel/PyXplore/DecomposePlot
2025-06-02T18:35:36,376   copying build/lib/PyXplore/DecomposePlot/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/DecomposePlot
2025-06-02T18:35:36,378   copying build/lib/PyXplore/DecomposePlot/plot.py -> build/bdist.linux-armv7l/wheel/./PyXplore/DecomposePlot
2025-06-02T18:35:36,381   creating build/bdist.linux-armv7l/wheel/PyXplore/GraphStructure
2025-06-02T18:35:36,383   copying build/lib/PyXplore/GraphStructure/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/GraphStructure
2025-06-02T18:35:36,385   copying build/lib/PyXplore/GraphStructure/graph.py -> build/bdist.linux-armv7l/wheel/./PyXplore/GraphStructure
2025-06-02T18:35:36,388   creating build/bdist.linux-armv7l/wheel/PyXplore/Background
2025-06-02T18:35:36,389   copying build/lib/PyXplore/Background/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Background
2025-06-02T18:35:36,391   copying build/lib/PyXplore/Background/BacDeduct.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Background
2025-06-02T18:35:36,394   creating build/bdist.linux-armv7l/wheel/PyXplore/Extinction
2025-06-02T18:35:36,396   copying build/lib/PyXplore/Extinction/Relaxer.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction
2025-06-02T18:35:36,398   copying build/lib/PyXplore/Extinction/CifReader.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction
2025-06-02T18:35:36,400   copying build/lib/PyXplore/Extinction/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction
2025-06-02T18:35:36,402   creating build/bdist.linux-armv7l/wheel/PyXplore/Extinction/wyckoff
2025-06-02T18:35:36,403   copying build/lib/PyXplore/Extinction/wyckoff/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/wyckoff
2025-06-02T18:35:36,407   copying build/lib/PyXplore/Extinction/wyckoff/wyckoff_dict.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/wyckoff
2025-06-02T18:35:36,416   creating build/bdist.linux-armv7l/wheel/PyXplore/Extinction/m3gnet
2025-06-02T18:35:36,418   creating build/bdist.linux-armv7l/wheel/PyXplore/Extinction/m3gnet/utils
2025-06-02T18:35:36,419   copying build/lib/PyXplore/Extinction/m3gnet/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/utils
2025-06-02T18:35:36,421   copying build/lib/PyXplore/Extinction/m3gnet/utils/_tf.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/utils
2025-06-02T18:35:36,423   copying build/lib/PyXplore/Extinction/m3gnet/utils/_general.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/utils
2025-06-02T18:35:36,425   copying build/lib/PyXplore/Extinction/m3gnet/utils/_math.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/utils
2025-06-02T18:35:36,428   copying build/lib/PyXplore/Extinction/m3gnet/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet
2025-06-02T18:35:36,430   copying build/lib/PyXplore/Extinction/m3gnet/cli.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet
2025-06-02T18:35:36,432   copying build/lib/PyXplore/Extinction/m3gnet/config.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet
2025-06-02T18:35:36,434   copying build/lib/PyXplore/Extinction/m3gnet/type.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet
2025-06-02T18:35:36,436   copying build/lib/PyXplore/Extinction/m3gnet/callbacks.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet
2025-06-02T18:35:36,438   creating build/bdist.linux-armv7l/wheel/PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,439   copying build/lib/PyXplore/Extinction/m3gnet/layers/_readout.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,442   copying build/lib/PyXplore/Extinction/m3gnet/layers/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,444   copying build/lib/PyXplore/Extinction/m3gnet/layers/_core.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,446   copying build/lib/PyXplore/Extinction/m3gnet/layers/_bond.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,449   copying build/lib/PyXplore/Extinction/m3gnet/layers/_aggregate.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,451   copying build/lib/PyXplore/Extinction/m3gnet/layers/_three_body.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,453   copying build/lib/PyXplore/Extinction/m3gnet/layers/_two_body.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,455   copying build/lib/PyXplore/Extinction/m3gnet/layers/_atom_ref.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,457   copying build/lib/PyXplore/Extinction/m3gnet/layers/_base.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,459   copying build/lib/PyXplore/Extinction/m3gnet/layers/_gn.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,462   copying build/lib/PyXplore/Extinction/m3gnet/layers/_basis.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,464   copying build/lib/PyXplore/Extinction/m3gnet/layers/_state.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,466   copying build/lib/PyXplore/Extinction/m3gnet/layers/_atom.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,468   copying build/lib/PyXplore/Extinction/m3gnet/layers/_cutoff.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/layers
2025-06-02T18:35:36,470   creating build/bdist.linux-armv7l/wheel/PyXplore/Extinction/m3gnet/models
2025-06-02T18:35:36,472   copying build/lib/PyXplore/Extinction/m3gnet/models/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/models
2025-06-02T18:35:36,474   copying build/lib/PyXplore/Extinction/m3gnet/models/_m3gnet.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/models
2025-06-02T18:35:36,476   copying build/lib/PyXplore/Extinction/m3gnet/models/_base.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/models
2025-06-02T18:35:36,479   copying build/lib/PyXplore/Extinction/m3gnet/models/_dynamics.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/models
2025-06-02T18:35:36,482   creating build/bdist.linux-armv7l/wheel/PyXplore/Extinction/m3gnet/trainers
2025-06-02T18:35:36,483   copying build/lib/PyXplore/Extinction/m3gnet/trainers/_property.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/trainers
2025-06-02T18:35:36,485   copying build/lib/PyXplore/Extinction/m3gnet/trainers/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/trainers
2025-06-02T18:35:36,487   copying build/lib/PyXplore/Extinction/m3gnet/trainers/_potential.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/trainers
2025-06-02T18:35:36,490   copying build/lib/PyXplore/Extinction/m3gnet/trainers/_metrics.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/trainers
2025-06-02T18:35:36,492   creating build/bdist.linux-armv7l/wheel/PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:36,494   copying build/lib/PyXplore/Extinction/m3gnet/graph/_converters.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:36,496   copying build/lib/PyXplore/Extinction/m3gnet/graph/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:36,498   copying build/lib/PyXplore/Extinction/m3gnet/graph/_compute.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:36,501   copying build/lib/PyXplore/Extinction/m3gnet/graph/_batch.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:36,503   copying build/lib/PyXplore/Extinction/m3gnet/graph/_types.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:36,506   copying build/lib/PyXplore/Extinction/m3gnet/graph/_structure.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction/m3gnet/graph
2025-06-02T18:35:36,508   copying build/lib/PyXplore/Extinction/XRDpre.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Extinction
2025-06-02T18:35:36,512   creating build/bdist.linux-armv7l/wheel/PyXplore/XRDSimulation
2025-06-02T18:35:36,513   copying build/lib/PyXplore/XRDSimulation/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/XRDSimulation
2025-06-02T18:35:36,516   creating build/bdist.linux-armv7l/wheel/PyXplore/XRDSimulation/DiffractionGrometry
2025-06-02T18:35:36,517   copying build/lib/PyXplore/XRDSimulation/DiffractionGrometry/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/XRDSimulation/DiffractionGrometry
2025-06-02T18:35:36,519   copying build/lib/PyXplore/XRDSimulation/DiffractionGrometry/atom.py -> build/bdist.linux-armv7l/wheel/./PyXplore/XRDSimulation/DiffractionGrometry
2025-06-02T18:35:36,522   copying build/lib/PyXplore/XRDSimulation/Simulation.py -> build/bdist.linux-armv7l/wheel/./PyXplore/XRDSimulation
2025-06-02T18:35:36,526   creating build/bdist.linux-armv7l/wheel/PyXplore/Plot
2025-06-02T18:35:36,527   copying build/lib/PyXplore/Plot/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Plot
2025-06-02T18:35:36,529   copying build/lib/PyXplore/Plot/UnitCell.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Plot
2025-06-02T18:35:36,532   creating build/bdist.linux-armv7l/wheel/PyXplore/StructureOpt
2025-06-02T18:35:36,533   copying build/lib/PyXplore/StructureOpt/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/StructureOpt
2025-06-02T18:35:36,535   copying build/lib/PyXplore/StructureOpt/SiteOpt.py -> build/bdist.linux-armv7l/wheel/./PyXplore/StructureOpt
2025-06-02T18:35:36,538   copying build/lib/PyXplore/WPEM.py -> build/bdist.linux-armv7l/wheel/./PyXplore
2025-06-02T18:35:36,541   creating build/bdist.linux-armv7l/wheel/PyXplore/Refinement
2025-06-02T18:35:36,543   copying build/lib/PyXplore/Refinement/VolumeFractionDertermination.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Refinement
2025-06-02T18:35:36,545   copying build/lib/PyXplore/Refinement/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/Refinement
2025-06-02T18:35:36,548   creating build/bdist.linux-armv7l/wheel/PyXplore/EMBraggOpt
2025-06-02T18:35:36,549   copying build/lib/PyXplore/EMBraggOpt/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/EMBraggOpt
2025-06-02T18:35:36,551   creating build/bdist.linux-armv7l/wheel/PyXplore/EMBraggOpt/WPEMFuns
2025-06-02T18:35:36,553   copying build/lib/PyXplore/EMBraggOpt/WPEMFuns/__init__.py -> build/bdist.linux-armv7l/wheel/./PyXplore/EMBraggOpt/WPEMFuns
2025-06-02T18:35:36,555   copying build/lib/PyXplore/EMBraggOpt/WPEMFuns/SolverFuns.py -> build/bdist.linux-armv7l/wheel/./PyXplore/EMBraggOpt/WPEMFuns
2025-06-02T18:35:36,557   copying build/lib/PyXplore/EMBraggOpt/EMBraggSolver.py -> build/bdist.linux-armv7l/wheel/./PyXplore/EMBraggOpt
2025-06-02T18:35:36,561   copying build/lib/PyXplore/EMBraggOpt/BraggLawDerivation.py -> build/bdist.linux-armv7l/wheel/./PyXplore/EMBraggOpt
2025-06-02T18:35:36,564   running install_egg_info
2025-06-02T18:35:36,604   Copying PyXplore.egg-info to build/bdist.linux-armv7l/wheel/./PyXplore-2025.7.21-py3.11.egg-info
2025-06-02T18:35:36,614   running install_scripts
2025-06-02T18:35:36,623   creating build/bdist.linux-armv7l/wheel/pyxplore-2025.7.21.dist-info/WHEEL
2025-06-02T18:35:36,626   creating '/tmp/pip-wheel-rjns3i87/pyxplore-2025.7.21-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-06-02T18:35:36,633   adding 'PyXplore/WPEM.py'
2025-06-02T18:35:36,634   adding 'PyXplore/__init__.py'
2025-06-02T18:35:36,636   adding 'PyXplore/Amorphous/__init__.py'
2025-06-02T18:35:36,638   adding 'PyXplore/Amorphous/QuantitativeCalculation/AmorphousRDF.py'
2025-06-02T18:35:36,640   adding 'PyXplore/Amorphous/QuantitativeCalculation/__init__.py'
2025-06-02T18:35:36,642   adding 'PyXplore/Amorphous/fitting/AmorphousFitting.py'
2025-06-02T18:35:36,644   adding 'PyXplore/Amorphous/fitting/__init__.py'
2025-06-02T18:35:36,647   adding 'PyXplore/Background/BacDeduct.py'
2025-06-02T18:35:36,648   adding 'PyXplore/Background/__init__.py'
2025-06-02T18:35:36,650   adding 'PyXplore/DecomposePlot/__init__.py'
2025-06-02T18:35:36,653   adding 'PyXplore/DecomposePlot/plot.py'
2025-06-02T18:35:36,657   adding 'PyXplore/EMBraggOpt/BraggLawDerivation.py'
2025-06-02T18:35:36,663   adding 'PyXplore/EMBraggOpt/EMBraggSolver.py'
2025-06-02T18:35:36,664   adding 'PyXplore/EMBraggOpt/__init__.py'
2025-06-02T18:35:36,667   adding 'PyXplore/EMBraggOpt/WPEMFuns/SolverFuns.py'
2025-06-02T18:35:36,669   adding 'PyXplore/EMBraggOpt/WPEMFuns/__init__.py'
2025-06-02T18:35:36,671   adding 'PyXplore/Extinction/CifReader.py'
2025-06-02T18:35:36,673   adding 'PyXplore/Extinction/Relaxer.py'
2025-06-02T18:35:36,677   adding 'PyXplore/Extinction/XRDpre.py'
2025-06-02T18:35:36,678   adding 'PyXplore/Extinction/__init__.py'
2025-06-02T18:35:36,680   adding 'PyXplore/Extinction/m3gnet/__init__.py'
2025-06-02T18:35:36,681   adding 'PyXplore/Extinction/m3gnet/callbacks.py'
2025-06-02T18:35:36,683   adding 'PyXplore/Extinction/m3gnet/cli.py'
2025-06-02T18:35:36,684   adding 'PyXplore/Extinction/m3gnet/config.py'
2025-06-02T18:35:36,685   adding 'PyXplore/Extinction/m3gnet/type.py'
2025-06-02T18:35:36,687   adding 'PyXplore/Extinction/m3gnet/graph/__init__.py'
2025-06-02T18:35:36,689   adding 'PyXplore/Extinction/m3gnet/graph/_batch.py'
2025-06-02T18:35:36,690   adding 'PyXplore/Extinction/m3gnet/graph/_compute.py'
2025-06-02T18:35:36,692   adding 'PyXplore/Extinction/m3gnet/graph/_converters.py'
2025-06-02T18:35:36,693   adding 'PyXplore/Extinction/m3gnet/graph/_structure.py'
2025-06-02T18:35:36,695   adding 'PyXplore/Extinction/m3gnet/graph/_types.py'
2025-06-02T18:35:36,697   adding 'PyXplore/Extinction/m3gnet/layers/__init__.py'
2025-06-02T18:35:36,699   adding 'PyXplore/Extinction/m3gnet/layers/_aggregate.py'
2025-06-02T18:35:36,700   adding 'PyXplore/Extinction/m3gnet/layers/_atom.py'
2025-06-02T18:35:36,702   adding 'PyXplore/Extinction/m3gnet/layers/_atom_ref.py'
2025-06-02T18:35:36,703   adding 'PyXplore/Extinction/m3gnet/layers/_base.py'
2025-06-02T18:35:36,704   adding 'PyXplore/Extinction/m3gnet/layers/_basis.py'
2025-06-02T18:35:36,706   adding 'PyXplore/Extinction/m3gnet/layers/_bond.py'
2025-06-02T18:35:36,707   adding 'PyXplore/Extinction/m3gnet/layers/_core.py'
2025-06-02T18:35:36,709   adding 'PyXplore/Extinction/m3gnet/layers/_cutoff.py'
2025-06-02T18:35:36,710   adding 'PyXplore/Extinction/m3gnet/layers/_gn.py'
2025-06-02T18:35:36,712   adding 'PyXplore/Extinction/m3gnet/layers/_readout.py'
2025-06-02T18:35:36,714   adding 'PyXplore/Extinction/m3gnet/layers/_state.py'
2025-06-02T18:35:36,715   adding 'PyXplore/Extinction/m3gnet/layers/_three_body.py'
2025-06-02T18:35:36,716   adding 'PyXplore/Extinction/m3gnet/layers/_two_body.py'
2025-06-02T18:35:36,718   adding 'PyXplore/Extinction/m3gnet/models/__init__.py'
2025-06-02T18:35:36,720   adding 'PyXplore/Extinction/m3gnet/models/_base.py'
2025-06-02T18:35:36,722   adding 'PyXplore/Extinction/m3gnet/models/_dynamics.py'
2025-06-02T18:35:36,724   adding 'PyXplore/Extinction/m3gnet/models/_m3gnet.py'
2025-06-02T18:35:36,726   adding 'PyXplore/Extinction/m3gnet/trainers/__init__.py'
2025-06-02T18:35:36,727   adding 'PyXplore/Extinction/m3gnet/trainers/_metrics.py'
2025-06-02T18:35:36,729   adding 'PyXplore/Extinction/m3gnet/trainers/_potential.py'
2025-06-02T18:35:36,731   adding 'PyXplore/Extinction/m3gnet/trainers/_property.py'
2025-06-02T18:35:36,733   adding 'PyXplore/Extinction/m3gnet/utils/__init__.py'
2025-06-02T18:35:36,735   adding 'PyXplore/Extinction/m3gnet/utils/_general.py'
2025-06-02T18:35:36,737   adding 'PyXplore/Extinction/m3gnet/utils/_math.py'
2025-06-02T18:35:36,738   adding 'PyXplore/Extinction/m3gnet/utils/_tf.py'
2025-06-02T18:35:36,740   adding 'PyXplore/Extinction/wyckoff/__init__.py'
2025-06-02T18:35:36,770   adding 'PyXplore/Extinction/wyckoff/wyckoff_dict.py'
2025-06-02T18:35:36,773   adding 'PyXplore/GraphStructure/__init__.py'
2025-06-02T18:35:36,775   adding 'PyXplore/GraphStructure/graph.py'
2025-06-02T18:35:36,777   adding 'PyXplore/Plot/UnitCell.py'
2025-06-02T18:35:36,778   adding 'PyXplore/Plot/__init__.py'
2025-06-02T18:35:36,781   adding 'PyXplore/Refinement/VolumeFractionDertermination.py'
2025-06-02T18:35:36,782   adding 'PyXplore/Refinement/__init__.py'
2025-06-02T18:35:36,785   adding 'PyXplore/StructureOpt/SiteOpt.py'
2025-06-02T18:35:36,786   adding 'PyXplore/StructureOpt/__init__.py'
2025-06-02T18:35:36,789   adding 'PyXplore/WPEMXAS/EXAFS.py'
2025-06-02T18:35:36,790   adding 'PyXplore/WPEMXAS/__init__.py'
2025-06-02T18:35:36,827   adding 'PyXplore/WPEMXAS/fftdemo.ipynb'
2025-06-02T18:35:36,834   adding 'PyXplore/WPEMXPS/XPSEM.py'
2025-06-02T18:35:36,836   adding 'PyXplore/WPEMXPS/__init__.py'
2025-06-02T18:35:36,839   adding 'PyXplore/XRDSimulation/Simulation.py'
2025-06-02T18:35:36,841   adding 'PyXplore/XRDSimulation/__init__.py'
2025-06-02T18:35:36,842   adding 'PyXplore/XRDSimulation/DiffractionGrometry/__init__.py'
2025-06-02T18:35:36,846   adding 'PyXplore/XRDSimulation/DiffractionGrometry/atom.py'
2025-06-02T18:35:37,712   adding 'PyXplore/refs/International_Union_of_Crystallography.pdf'
2025-06-02T18:35:37,978   adding 'PyXplore/refs/WPEM_Manual.pdf'
2025-06-02T18:35:37,992   adding 'pyxplore-2025.7.21.dist-info/METADATA'
2025-06-02T18:35:37,992   adding 'pyxplore-2025.7.21.dist-info/WHEEL'
2025-06-02T18:35:37,993   adding 'pyxplore-2025.7.21.dist-info/top_level.txt'
2025-06-02T18:35:37,995   adding 'pyxplore-2025.7.21.dist-info/RECORD'
2025-06-02T18:35:38,088   removing build/bdist.linux-armv7l/wheel
2025-06-02T18:35:38,228   Building wheel for pyxplore (setup.py): finished with status 'done'
2025-06-02T18:35:38,316   Created wheel for pyxplore: filename=pyxplore-2025.7.21-py3-none-any.whl size=8197532 sha256=1ecc70e8f1eb1e905f8518ebb999eba917e4180ab9ecf979e3cba0147389aa67
2025-06-02T18:35:38,317   Stored in directory: /tmp/pip-ephem-wheel-cache-va31sb9z/wheels/28/fd/c0/c95a0a5fd84f4f1211e89df88bab826773134e1b792c4a9444
2025-06-02T18:35:38,332 Successfully built pyxplore
2025-06-02T18:35:38,532 Removed build tracker: '/tmp/pip-build-tracker-yizs8r61'