2025-06-03T13:23:09,211 Created temporary directory: /tmp/pip-build-tracker-nkqdvw29 2025-06-03T13:23:09,212 Initialized build tracking at /tmp/pip-build-tracker-nkqdvw29 2025-06-03T13:23:09,213 Created build tracker: /tmp/pip-build-tracker-nkqdvw29 2025-06-03T13:23:09,213 Entered build tracker: /tmp/pip-build-tracker-nkqdvw29 2025-06-03T13:23:09,214 Created temporary directory: /tmp/pip-wheel-6i10apy0 2025-06-03T13:23:09,218 Created temporary directory: /tmp/pip-ephem-wheel-cache-9uf4je94 2025-06-03T13:23:09,265 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-06-03T13:23:09,267 2 location(s) to search for versions of hivclustering: 2025-06-03T13:23:09,267 * https://pypi.org/simple/hivclustering/ 2025-06-03T13:23:09,267 * https://www.piwheels.org/simple/hivclustering/ 2025-06-03T13:23:09,268 Fetching project page and analyzing links: https://pypi.org/simple/hivclustering/ 2025-06-03T13:23:09,269 Getting page https://pypi.org/simple/hivclustering/ 2025-06-03T13:23:09,271 Found index url https://pypi.org/simple/ 2025-06-03T13:23:09,416 Fetched page https://pypi.org/simple/hivclustering/ as application/vnd.pypi.simple.v1+json 2025-06-03T13:23:09,421 Found link https://files.pythonhosted.org/packages/be/63/218c39b9ad0311be7a12702cf853f2d0305e6fd4458d58d3ee0a3bf429a6/hivclustering-1.2.5.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.2.5 2025-06-03T13:23:09,422 Found link https://files.pythonhosted.org/packages/67/d6/ccf018b983946e9edbcb38bdac99dad65e3199623505563a793e3d7993ca/hivclustering-1.2.6.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.2.6 2025-06-03T13:23:09,422 Found link https://files.pythonhosted.org/packages/94/78/880ea9da2705624a346e8f823b6cab8fc264b8505336d5d19280af23e619/hivclustering-1.2.7.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.2.7 2025-06-03T13:23:09,423 Found link https://files.pythonhosted.org/packages/50/01/828d4bfa522848698970e08f4277024c18852b86dbdfc5191bb271d756af/hivclustering-1.2.8.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.2.8 2025-06-03T13:23:09,424 Found link https://files.pythonhosted.org/packages/b8/f3/4eb8073b7f1343311edb38046396c39debb8553bbbcabf3866cfe9057c4e/hivclustering-1.3.0.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.3.0 2025-06-03T13:23:09,424 Found link https://files.pythonhosted.org/packages/48/82/f9031dd1c00db81a9165533a52508e28190a9a48b88103f7d61b18f3ed6d/hivclustering-1.3.1.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.3.1 2025-06-03T13:23:09,425 Found link https://files.pythonhosted.org/packages/eb/5c/56e25f045d57d87737de12af90eb9d31d6e0ddb490c614fcf719a5a51de8/hivclustering-1.3.2.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.3.2 2025-06-03T13:23:09,426 Found link https://files.pythonhosted.org/packages/ad/1b/ddc494adedcd724936919219d78d243f45a07afd806a91f64e6b6b83a411/hivclustering-1.4.1.macosx-10.13-x86_64.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.4.1.macosx-10.13-x86_64 2025-06-03T13:23:09,426 Found link https://files.pythonhosted.org/packages/c8/ad/30f905579ed48a1df529c7deb1d9da7fb2967fc995b3a7a6aab4395244e7/hivclustering-1.4.2.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.4.2 2025-06-03T13:23:09,427 Found link https://files.pythonhosted.org/packages/52/bb/41b5d5516072ed73d68dc15c00412d9573eaf91e23d67bd98ae78d900d34/hivclustering-1.5.1.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.1 2025-06-03T13:23:09,428 Found link https://files.pythonhosted.org/packages/a0/c2/8b3aec81b0f81a22d9185cfa5d37d55934cc40606b06925c3ee9c3f491af/hivclustering-1.5.2.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.2 2025-06-03T13:23:09,429 Found link https://files.pythonhosted.org/packages/63/17/4605c1c87e3723a00e8eb42f7d4447f7caf435d42157098ff6c01bdd2e37/hivclustering-1.5.3.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.3 2025-06-03T13:23:09,429 Found link https://files.pythonhosted.org/packages/fd/07/061ce4cf24804185c21ec2fef88fcb32e879eeabf5f3d8175e8ea542f971/hivclustering-1.5.4.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.4 2025-06-03T13:23:09,430 Found link https://files.pythonhosted.org/packages/0c/a6/867a016c6b57f0ba9319a19965f71c0aa3ffeea31de659cec77eec61e1f7/hivclustering-1.5.5.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.5 2025-06-03T13:23:09,431 Found link https://files.pythonhosted.org/packages/21/e2/594b207e4ca053018bb7c6a05a09e5d6320e6b763d7ce3168fd9cd320b92/hivclustering-1.5.6.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.6 2025-06-03T13:23:09,432 Found link https://files.pythonhosted.org/packages/ba/96/d6e85a86f9155dab46e4b8eb9ff9859f281ec5d5ddfda2893411cb470ab7/hivclustering-1.6.0.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.0 2025-06-03T13:23:09,432 Found link https://files.pythonhosted.org/packages/0a/42/d7d17d0f48093305713468653526872f20d447d91d95dde19539a5c98f4b/hivclustering-1.6.1.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.1 2025-06-03T13:23:09,433 Found link https://files.pythonhosted.org/packages/06/27/ddc42bc60270c1b726a9dcd1971665ac257ca423cd83032cc4157000aaba/hivclustering-1.6.2.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.2 2025-06-03T13:23:09,433 Found link https://files.pythonhosted.org/packages/8c/27/1c8b29923936dda2893e2c060062bd99c11c01806a769fce6213d12d6587/hivclustering-1.6.3.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.3 2025-06-03T13:23:09,434 Found link https://files.pythonhosted.org/packages/f4/87/b69a4f8b1b5495cdd411fbf6b26719c614bf9df2769dc879d8ebc629c9b4/hivclustering-1.6.4.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.4 2025-06-03T13:23:09,434 Skipping link: No binaries permitted for hivclustering: https://files.pythonhosted.org/packages/34/8c/0de865c0c8fb2ecd1d89ede3f3f83f85d197e271b7dcdcaa3516c881c965/hivclustering-1.6.5-py3-none-any.whl (from https://pypi.org/simple/hivclustering/) 2025-06-03T13:23:09,435 Found link https://files.pythonhosted.org/packages/4c/b4/7a699eca4918e73b2eb14ad3ff99c7e609ee88601b060a2fee4c96417673/hivclustering-1.6.5.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.5 2025-06-03T13:23:09,436 Skipping link: No binaries permitted for hivclustering: https://files.pythonhosted.org/packages/21/33/849c3fe3744ba1f195434e32297893568d1312c0464b8912491d356ef22e/hivclustering-1.6.6-py3-none-any.whl (from https://pypi.org/simple/hivclustering/) 2025-06-03T13:23:09,436 Skipping link: No binaries permitted for hivclustering: https://files.pythonhosted.org/packages/2c/13/c6b43cda5d3950b48e82274cf39455132c64cfe88e23ca9b348bcfc0b845/hivclustering-1.6.7-py3-none-any.whl (from https://pypi.org/simple/hivclustering/) 2025-06-03T13:23:09,437 Found link https://files.pythonhosted.org/packages/98/28/f855f0803a8fe6f4f0916b158f57e50bc63a38576b73958c56af95128c8f/hivclustering-1.6.7.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.7 2025-06-03T13:23:09,438 Found link https://files.pythonhosted.org/packages/ab/92/e6ec5e7e907d6857dfbe0f1e6e9a0676c9c8a9f55eac2afe35e0353797c2/hivclustering-1.6.8.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.8 2025-06-03T13:23:09,438 Found link https://files.pythonhosted.org/packages/ee/cf/c13c2c1e4141935145b94d33f8f2bdf96677009643401bce9a5fba88c0cf/hivclustering-1.7.0.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.7.0 2025-06-03T13:23:09,439 Found link https://files.pythonhosted.org/packages/42/d3/854326ba5c558c960a0860244ce59f5259c7ed67d24bc7d50edaec6f941b/hivclustering-1.8.0.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.8.0 2025-06-03T13:23:09,440 Found link https://files.pythonhosted.org/packages/be/35/32075a85a11abb3e46b5c68e8a812ed47c70be777283c2546e01a0ca8595/hivclustering-1.9.0.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.9.0 2025-06-03T13:23:09,440 Found link https://files.pythonhosted.org/packages/20/82/fc09ec449cd701ebee5c617d40251438bb8d729967345363367b68e693b4/hivclustering-1.9.1.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.9.1 2025-06-03T13:23:09,441 Found link https://files.pythonhosted.org/packages/19/c3/b000e6a09a102361863f2026e88ee54a5fdb477195614b3dce802a10b036/hivclustering-1.9.2.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.9.2 2025-06-03T13:23:09,443 Found link https://files.pythonhosted.org/packages/51/0d/53ce02283e351acf1cbae924eabb2ff0805a9b4193902ca085184afe386b/hivclustering-1.9.3.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.9.3 2025-06-03T13:23:09,443 Found link https://files.pythonhosted.org/packages/64/8f/252e8f27564399dc4784d397bcb26b56dae6fe834444aedbcd47cf4a1d89/hivclustering-1.9.4.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.9.4 2025-06-03T13:23:09,444 Found link https://files.pythonhosted.org/packages/9a/e8/14bd1c48fb4da153dbddf5bed68b7e0505454321946f32f9f56e5d62d8ee/hivclustering-1.9.5.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.9.5 2025-06-03T13:23:09,444 Fetching project page and analyzing links: https://www.piwheels.org/simple/hivclustering/ 2025-06-03T13:23:09,445 Getting page https://www.piwheels.org/simple/hivclustering/ 2025-06-03T13:23:09,446 Found index url https://www.piwheels.org/simple/ 2025-06-03T13:23:09,601 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/hivclustering/ 2025-06-03T13:23:10,256 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/hivclustering/ 2025-06-03T13:23:11,470 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/hivclustering/ 2025-06-03T13:23:13,661 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/hivclustering/ 2025-06-03T13:23:17,868 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/hivclustering/ 2025-06-03T13:23:18,087 Could not fetch URL https://www.piwheels.org/simple/hivclustering/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/hivclustering/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-06-03T13:23:18,089 Skipping link: not a file: https://www.piwheels.org/simple/hivclustering/ 2025-06-03T13:23:18,090 Skipping link: not a file: https://pypi.org/simple/hivclustering/ 2025-06-03T13:23:18,111 Given no hashes to check 1 links for project 'hivclustering': discarding no candidates 2025-06-03T13:23:18,113 Collecting hivclustering==1.9.2 2025-06-03T13:23:18,115 Created temporary directory: /tmp/pip-unpack-pxigup8a 2025-06-03T13:23:18,362 Downloading hivclustering-1.9.2.tar.gz (62 kB) 2025-06-03T13:23:18,455 Added hivclustering==1.9.2 from https://files.pythonhosted.org/packages/19/c3/b000e6a09a102361863f2026e88ee54a5fdb477195614b3dce802a10b036/hivclustering-1.9.2.tar.gz to build tracker '/tmp/pip-build-tracker-nkqdvw29' 2025-06-03T13:23:18,457 Running setup.py (path:/tmp/pip-wheel-6i10apy0/hivclustering_c944e8ae859c4442b18e6762aa43478c/setup.py) egg_info for package hivclustering 2025-06-03T13:23:18,458 Created temporary directory: /tmp/pip-pip-egg-info-xg8kwsz0 2025-06-03T13:23:18,459 Preparing metadata (setup.py): started 2025-06-03T13:23:18,460 Running command python setup.py egg_info 2025-06-03T13:23:19,387 running egg_info 2025-06-03T13:23:19,415 creating /tmp/pip-pip-egg-info-xg8kwsz0/hivclustering.egg-info 2025-06-03T13:23:19,416 writing /tmp/pip-pip-egg-info-xg8kwsz0/hivclustering.egg-info/PKG-INFO 2025-06-03T13:23:19,420 writing dependency_links to /tmp/pip-pip-egg-info-xg8kwsz0/hivclustering.egg-info/dependency_links.txt 2025-06-03T13:23:19,423 writing requirements to /tmp/pip-pip-egg-info-xg8kwsz0/hivclustering.egg-info/requires.txt 2025-06-03T13:23:19,424 writing top-level names to /tmp/pip-pip-egg-info-xg8kwsz0/hivclustering.egg-info/top_level.txt 2025-06-03T13:23:19,426 writing manifest file '/tmp/pip-pip-egg-info-xg8kwsz0/hivclustering.egg-info/SOURCES.txt' 2025-06-03T13:23:19,542 reading manifest file '/tmp/pip-pip-egg-info-xg8kwsz0/hivclustering.egg-info/SOURCES.txt' 2025-06-03T13:23:19,547 writing manifest file '/tmp/pip-pip-egg-info-xg8kwsz0/hivclustering.egg-info/SOURCES.txt' 2025-06-03T13:23:19,653 Preparing metadata (setup.py): finished with status 'done' 2025-06-03T13:23:19,656 Source in /tmp/pip-wheel-6i10apy0/hivclustering_c944e8ae859c4442b18e6762aa43478c has version 1.9.2, which satisfies requirement hivclustering==1.9.2 from https://files.pythonhosted.org/packages/19/c3/b000e6a09a102361863f2026e88ee54a5fdb477195614b3dce802a10b036/hivclustering-1.9.2.tar.gz 2025-06-03T13:23:19,657 Removed hivclustering==1.9.2 from https://files.pythonhosted.org/packages/19/c3/b000e6a09a102361863f2026e88ee54a5fdb477195614b3dce802a10b036/hivclustering-1.9.2.tar.gz from build tracker '/tmp/pip-build-tracker-nkqdvw29' 2025-06-03T13:23:19,663 Created temporary directory: /tmp/pip-unpack-dg6oimeb 2025-06-03T13:23:19,664 Created temporary directory: /tmp/pip-unpack-hb1sd6px 2025-06-03T13:23:19,664 Building wheels for collected packages: hivclustering 2025-06-03T13:23:19,669 Created temporary directory: /tmp/pip-wheel-uzc41hkf 2025-06-03T13:23:19,669 DEPRECATION: Building 'hivclustering' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'hivclustering'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-06-03T13:23:19,671 Building wheel for hivclustering (setup.py): started 2025-06-03T13:23:19,672 Destination directory: /tmp/pip-wheel-uzc41hkf 2025-06-03T13:23:19,673 Running command python setup.py bdist_wheel 2025-06-03T13:23:20,525 running bdist_wheel 2025-06-03T13:23:20,655 running build 2025-06-03T13:23:20,656 running build_py 2025-06-03T13:23:20,686 creating build/lib/hivclustering 2025-06-03T13:23:20,688 copying hivclustering/networkbuild.py -> build/lib/hivclustering 2025-06-03T13:23:20,692 copying hivclustering/__init__.py -> build/lib/hivclustering 2025-06-03T13:23:20,694 copying hivclustering/mtnetwork.py -> build/lib/hivclustering 2025-06-03T13:23:20,699 creating build/lib/hivclustering/data/HBL 2025-06-03T13:23:20,701 copying hivclustering/data/HBL/TriangleSupport.bf -> build/lib/hivclustering/data/HBL 2025-06-03T13:23:20,704 copying hivclustering/data/HBL/CycleSupport.bf -> build/lib/hivclustering/data/HBL 2025-06-03T13:23:20,707 copying hivclustering/data/HBL/ExtractACluster.bf -> build/lib/hivclustering/data/HBL 2025-06-03T13:23:20,710 copying hivclustering/data/HBL/ExtractSequences.bf -> build/lib/hivclustering/data/HBL 2025-06-03T13:23:20,712 copying hivclustering/data/HBL/DegreeDistributions.bf -> build/lib/hivclustering/data/HBL 2025-06-03T13:23:20,715 copying hivclustering/data/HBL/SimulateSequence.bf -> build/lib/hivclustering/data/HBL 2025-06-03T13:23:20,718 running build_scripts 2025-06-03T13:23:20,718 creating build/scripts-3.11 2025-06-03T13:23:20,719 copying and adjusting scripts/hivnetworkcsv -> build/scripts-3.11 2025-06-03T13:23:20,723 copying and adjusting scripts/TNS -> build/scripts-3.11 2025-06-03T13:23:20,725 copying and adjusting scripts/hivnetworkannotate -> build/scripts-3.11 2025-06-03T13:23:20,727 changing mode of build/scripts-3.11/hivnetworkcsv from 644 to 755 2025-06-03T13:23:20,728 changing mode of build/scripts-3.11/TNS from 644 to 755 2025-06-03T13:23:20,728 changing mode of build/scripts-3.11/hivnetworkannotate from 644 to 755 2025-06-03T13:23:20,755 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-06-03T13:23:20,756 !! 2025-06-03T13:23:20,756 ******************************************************************************** 2025-06-03T13:23:20,757 Please avoid running ``setup.py`` directly. 2025-06-03T13:23:20,757 Instead, use pypa/build, pypa/installer or other 2025-06-03T13:23:20,758 standards-based tools. 2025-06-03T13:23:20,759 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-06-03T13:23:20,759 or your builds will no longer be supported. 2025-06-03T13:23:20,760 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-06-03T13:23:20,761 ******************************************************************************** 2025-06-03T13:23:20,762 !! 2025-06-03T13:23:20,762 self.initialize_options() 2025-06-03T13:23:20,782 installing to build/bdist.linux-armv7l/wheel 2025-06-03T13:23:20,783 running install 2025-06-03T13:23:20,807 running install_lib 2025-06-03T13:23:20,833 creating build/bdist.linux-armv7l/wheel 2025-06-03T13:23:20,836 creating build/bdist.linux-armv7l/wheel/hivclustering 2025-06-03T13:23:20,837 creating build/bdist.linux-armv7l/wheel/hivclustering/data 2025-06-03T13:23:20,839 creating build/bdist.linux-armv7l/wheel/hivclustering/data/HBL 2025-06-03T13:23:20,840 copying build/lib/hivclustering/data/HBL/TriangleSupport.bf -> build/bdist.linux-armv7l/wheel/./hivclustering/data/HBL 2025-06-03T13:23:20,843 copying build/lib/hivclustering/data/HBL/CycleSupport.bf -> build/bdist.linux-armv7l/wheel/./hivclustering/data/HBL 2025-06-03T13:23:20,845 copying build/lib/hivclustering/data/HBL/ExtractACluster.bf -> build/bdist.linux-armv7l/wheel/./hivclustering/data/HBL 2025-06-03T13:23:20,847 copying build/lib/hivclustering/data/HBL/ExtractSequences.bf -> build/bdist.linux-armv7l/wheel/./hivclustering/data/HBL 2025-06-03T13:23:20,849 copying build/lib/hivclustering/data/HBL/DegreeDistributions.bf -> build/bdist.linux-armv7l/wheel/./hivclustering/data/HBL 2025-06-03T13:23:20,851 copying build/lib/hivclustering/data/HBL/SimulateSequence.bf -> build/bdist.linux-armv7l/wheel/./hivclustering/data/HBL 2025-06-03T13:23:20,854 copying build/lib/hivclustering/networkbuild.py -> build/bdist.linux-armv7l/wheel/./hivclustering 2025-06-03T13:23:20,857 copying build/lib/hivclustering/__init__.py -> build/bdist.linux-armv7l/wheel/./hivclustering 2025-06-03T13:23:20,859 copying build/lib/hivclustering/mtnetwork.py -> build/bdist.linux-armv7l/wheel/./hivclustering 2025-06-03T13:23:20,863 running install_egg_info 2025-06-03T13:23:20,898 running egg_info 2025-06-03T13:23:20,927 writing hivclustering.egg-info/PKG-INFO 2025-06-03T13:23:20,931 writing dependency_links to hivclustering.egg-info/dependency_links.txt 2025-06-03T13:23:20,934 writing requirements to hivclustering.egg-info/requires.txt 2025-06-03T13:23:20,936 writing top-level names to hivclustering.egg-info/top_level.txt 2025-06-03T13:23:20,966 reading manifest file 'hivclustering.egg-info/SOURCES.txt' 2025-06-03T13:23:20,972 writing manifest file 'hivclustering.egg-info/SOURCES.txt' 2025-06-03T13:23:20,973 Copying hivclustering.egg-info to build/bdist.linux-armv7l/wheel/./hivclustering-1.9.2-py3.11.egg-info 2025-06-03T13:23:20,984 running install_scripts 2025-06-03T13:23:20,985 creating build/bdist.linux-armv7l/wheel/hivclustering-1.9.2.data/scripts 2025-06-03T13:23:20,986 copying build/scripts-3.11/hivnetworkannotate -> build/bdist.linux-armv7l/wheel/hivclustering-1.9.2.data/scripts 2025-06-03T13:23:20,989 copying build/scripts-3.11/hivnetworkcsv -> build/bdist.linux-armv7l/wheel/hivclustering-1.9.2.data/scripts 2025-06-03T13:23:20,992 copying build/scripts-3.11/TNS -> build/bdist.linux-armv7l/wheel/hivclustering-1.9.2.data/scripts 2025-06-03T13:23:20,994 changing mode of build/bdist.linux-armv7l/wheel/hivclustering-1.9.2.data/scripts/hivnetworkannotate to 755 2025-06-03T13:23:20,995 changing mode of build/bdist.linux-armv7l/wheel/hivclustering-1.9.2.data/scripts/hivnetworkcsv to 755 2025-06-03T13:23:20,995 changing mode of build/bdist.linux-armv7l/wheel/hivclustering-1.9.2.data/scripts/TNS to 755 2025-06-03T13:23:21,005 creating build/bdist.linux-armv7l/wheel/hivclustering-1.9.2.dist-info/WHEEL 2025-06-03T13:23:21,007 creating '/tmp/pip-wheel-uzc41hkf/hivclustering-1.9.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-06-03T13:23:21,010 adding 'hivclustering/__init__.py' 2025-06-03T13:23:21,022 adding 'hivclustering/mtnetwork.py' 2025-06-03T13:23:21,028 adding 'hivclustering/networkbuild.py' 2025-06-03T13:23:21,031 adding 'hivclustering/data/HBL/CycleSupport.bf' 2025-06-03T13:23:21,033 adding 'hivclustering/data/HBL/DegreeDistributions.bf' 2025-06-03T13:23:21,034 adding 'hivclustering/data/HBL/ExtractACluster.bf' 2025-06-03T13:23:21,036 adding 'hivclustering/data/HBL/ExtractSequences.bf' 2025-06-03T13:23:21,038 adding 'hivclustering/data/HBL/SimulateSequence.bf' 2025-06-03T13:23:21,039 adding 'hivclustering/data/HBL/TriangleSupport.bf' 2025-06-03T13:23:21,043 adding 'hivclustering-1.9.2.data/scripts/TNS' 2025-06-03T13:23:21,045 adding 'hivclustering-1.9.2.data/scripts/hivnetworkannotate' 2025-06-03T13:23:21,049 adding 'hivclustering-1.9.2.data/scripts/hivnetworkcsv' 2025-06-03T13:23:21,051 adding 'hivclustering-1.9.2.dist-info/METADATA' 2025-06-03T13:23:21,052 adding 'hivclustering-1.9.2.dist-info/WHEEL' 2025-06-03T13:23:21,053 adding 'hivclustering-1.9.2.dist-info/top_level.txt' 2025-06-03T13:23:21,054 adding 'hivclustering-1.9.2.dist-info/RECORD' 2025-06-03T13:23:21,057 removing build/bdist.linux-armv7l/wheel 2025-06-03T13:23:21,171 Building wheel for hivclustering (setup.py): finished with status 'done' 2025-06-03T13:23:21,174 Created wheel for hivclustering: filename=hivclustering-1.9.2-py3-none-any.whl size=61854 sha256=5adae730c221563e7e1ca1bd9f70792c3f9435f9d5619a954130a1b89fd25c9d 2025-06-03T13:23:21,175 Stored in directory: /tmp/pip-ephem-wheel-cache-9uf4je94/wheels/e7/0b/55/5bf76b90e50b3be4d3cd3146e1f1452aec997afaa72447203d 2025-06-03T13:23:21,186 Successfully built hivclustering 2025-06-03T13:23:21,191 Removed build tracker: '/tmp/pip-build-tracker-nkqdvw29'