2025-05-30T02:54:27,441 Created temporary directory: /tmp/pip-build-tracker-o7olfe2i 2025-05-30T02:54:27,442 Initialized build tracking at /tmp/pip-build-tracker-o7olfe2i 2025-05-30T02:54:27,443 Created build tracker: /tmp/pip-build-tracker-o7olfe2i 2025-05-30T02:54:27,443 Entered build tracker: /tmp/pip-build-tracker-o7olfe2i 2025-05-30T02:54:27,444 Created temporary directory: /tmp/pip-wheel-lp7ui6pf 2025-05-30T02:54:27,448 Created temporary directory: /tmp/pip-ephem-wheel-cache-l8ofe7b1 2025-05-30T02:54:27,500 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-05-30T02:54:27,502 2 location(s) to search for versions of rcsb-utils-chem: 2025-05-30T02:54:27,502 * https://pypi.org/simple/rcsb-utils-chem/ 2025-05-30T02:54:27,502 * https://www.piwheels.org/simple/rcsb-utils-chem/ 2025-05-30T02:54:27,503 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chem/ 2025-05-30T02:54:27,503 Getting page 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https://files.pythonhosted.org/packages/8a/33/020e48d7babc7f463e2247f3560cca1fe6c9809ec2158fe50f5f08c0bf5d/rcsb.utils.chem-0.77.tar.gz (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.77 2025-05-30T02:54:27,894 Found link https://files.pythonhosted.org/packages/b0/79/21a15f6b3358e5d023ac84002d2a02e550d547d34de69829fe1501fc7fe9/rcsb.utils.chem-0.78.tar.gz (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.78 2025-05-30T02:54:27,895 Found link https://files.pythonhosted.org/packages/c7/ee/efe5199a10239fa2e2e659305f19d4b3efbb73afbbb99ca7061d302daf81/rcsb.utils.chem-0.79.tar.gz (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.79 2025-05-30T02:54:27,895 Found link https://files.pythonhosted.org/packages/3b/e9/0e40905f992b601a6d2eedcf5268e22b14e4b4592d6db3465edc38defd4b/rcsb_utils_chem-0.80.tar.gz (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.80 2025-05-30T02:54:27,896 Found link 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https://www.piwheels.org/simple/rcsb-utils-chem/ 2025-05-30T02:54:27,900 Getting page https://www.piwheels.org/simple/rcsb-utils-chem/ 2025-05-30T02:54:27,901 Found index url https://www.piwheels.org/simple/ 2025-05-30T02:54:28,072 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/rcsb-utils-chem/ 2025-05-30T02:54:28,727 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/rcsb-utils-chem/ 2025-05-30T02:54:29,941 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/rcsb-utils-chem/ 2025-05-30T02:54:32,158 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/rcsb-utils-chem/ 2025-05-30T02:54:36,390 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))': /simple/rcsb-utils-chem/ 2025-05-30T02:54:36,588 Could not fetch URL https://www.piwheels.org/simple/rcsb-utils-chem/: There was a problem confirming the ssl certificate: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/rcsb-utils-chem/ (Caused by SSLError(SSLCertVerificationError(1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate is not yet valid (_ssl.c:992)'))) - skipping 2025-05-30T02:54:36,590 Skipping link: not a file: https://www.piwheels.org/simple/rcsb-utils-chem/ 2025-05-30T02:54:36,590 Skipping link: not a file: https://pypi.org/simple/rcsb-utils-chem/ 2025-05-30T02:54:36,617 Given no hashes to check 1 links for project 'rcsb-utils-chem': discarding no candidates 2025-05-30T02:54:36,619 Collecting rcsb-utils-chem==0.84 2025-05-30T02:54:36,621 Created temporary directory: /tmp/pip-unpack-mh1j8xiu 2025-05-30T02:54:36,858 Downloading rcsb_utils_chem-0.84.tar.gz (86 kB) 2025-05-30T02:54:37,026 Added rcsb-utils-chem==0.84 from https://files.pythonhosted.org/packages/bb/43/9dcd9cc24d2cbc363e09d254ed9d20d249247b9845bf7741a8642bf05250/rcsb_utils_chem-0.84.tar.gz to build tracker '/tmp/pip-build-tracker-o7olfe2i' 2025-05-30T02:54:37,028 Running setup.py (path:/tmp/pip-wheel-lp7ui6pf/rcsb-utils-chem_7606e240a14e407bb1cb24ea38284ae5/setup.py) egg_info for package rcsb-utils-chem 2025-05-30T02:54:37,029 Created temporary directory: /tmp/pip-pip-egg-info-sjz5wmcq 2025-05-30T02:54:37,030 Preparing metadata (setup.py): started 2025-05-30T02:54:37,031 Running command python setup.py egg_info 2025-05-30T02:54:37,618 Warning: 'classifiers' should be a list, got type 'tuple' 2025-05-30T02:54:37,621 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-05-30T02:54:37,622 warnings.warn(msg) 2025-05-30T02:54:37,622 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' 2025-05-30T02:54:37,623 warnings.warn(msg) 2025-05-30T02:54:37,931 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-05-30T02:54:37,932 !! 2025-05-30T02:54:37,933 ******************************************************************************** 2025-05-30T02:54:37,933 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-05-30T02:54:37,934 License :: OSI Approved :: Apache Software License 2025-05-30T02:54:37,935 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-05-30T02:54:37,936 ******************************************************************************** 2025-05-30T02:54:37,937 !! 2025-05-30T02:54:37,937 self._finalize_license_expression() 2025-05-30T02:54:37,961 running egg_info 2025-05-30T02:54:37,988 creating /tmp/pip-pip-egg-info-sjz5wmcq/rcsb.utils.chem.egg-info 2025-05-30T02:54:37,989 writing /tmp/pip-pip-egg-info-sjz5wmcq/rcsb.utils.chem.egg-info/PKG-INFO 2025-05-30T02:54:37,994 writing dependency_links to /tmp/pip-pip-egg-info-sjz5wmcq/rcsb.utils.chem.egg-info/dependency_links.txt 2025-05-30T02:54:37,995 writing entry points to /tmp/pip-pip-egg-info-sjz5wmcq/rcsb.utils.chem.egg-info/entry_points.txt 2025-05-30T02:54:37,997 writing requirements to /tmp/pip-pip-egg-info-sjz5wmcq/rcsb.utils.chem.egg-info/requires.txt 2025-05-30T02:54:37,998 writing top-level names to /tmp/pip-pip-egg-info-sjz5wmcq/rcsb.utils.chem.egg-info/top_level.txt 2025-05-30T02:54:38,000 writing manifest file '/tmp/pip-pip-egg-info-sjz5wmcq/rcsb.utils.chem.egg-info/SOURCES.txt' 2025-05-30T02:54:38,093 reading manifest file '/tmp/pip-pip-egg-info-sjz5wmcq/rcsb.utils.chem.egg-info/SOURCES.txt' 2025-05-30T02:54:38,095 reading manifest template 'MANIFEST.in' 2025-05-30T02:54:38,096 adding license file 'LICENSE' 2025-05-30T02:54:38,100 writing manifest file '/tmp/pip-pip-egg-info-sjz5wmcq/rcsb.utils.chem.egg-info/SOURCES.txt' 2025-05-30T02:54:38,208 Preparing metadata (setup.py): finished with status 'done' 2025-05-30T02:54:38,212 Source in /tmp/pip-wheel-lp7ui6pf/rcsb-utils-chem_7606e240a14e407bb1cb24ea38284ae5 has version 0.84, which satisfies requirement rcsb-utils-chem==0.84 from https://files.pythonhosted.org/packages/bb/43/9dcd9cc24d2cbc363e09d254ed9d20d249247b9845bf7741a8642bf05250/rcsb_utils_chem-0.84.tar.gz 2025-05-30T02:54:38,213 Removed rcsb-utils-chem==0.84 from https://files.pythonhosted.org/packages/bb/43/9dcd9cc24d2cbc363e09d254ed9d20d249247b9845bf7741a8642bf05250/rcsb_utils_chem-0.84.tar.gz from build tracker '/tmp/pip-build-tracker-o7olfe2i' 2025-05-30T02:54:38,219 Created temporary directory: /tmp/pip-unpack-a4r_pvnx 2025-05-30T02:54:38,220 Created temporary directory: /tmp/pip-unpack-ljv3v1zg 2025-05-30T02:54:38,221 Building wheels for collected packages: rcsb-utils-chem 2025-05-30T02:54:38,225 Created temporary directory: /tmp/pip-wheel-6nkdvl8k 2025-05-30T02:54:38,226 DEPRECATION: Building 'rcsb-utils-chem' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'rcsb-utils-chem'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-05-30T02:54:38,227 Building wheel for rcsb-utils-chem (setup.py): started 2025-05-30T02:54:38,228 Destination directory: /tmp/pip-wheel-6nkdvl8k 2025-05-30T02:54:38,229 Running command python setup.py bdist_wheel 2025-05-30T02:54:38,753 Warning: 'classifiers' should be a list, got type 'tuple' 2025-05-30T02:54:38,755 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-05-30T02:54:38,755 warnings.warn(msg) 2025-05-30T02:54:38,756 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' 2025-05-30T02:54:38,757 warnings.warn(msg) 2025-05-30T02:54:39,044 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-05-30T02:54:39,045 !! 2025-05-30T02:54:39,046 ******************************************************************************** 2025-05-30T02:54:39,046 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-05-30T02:54:39,047 License :: OSI Approved :: Apache Software License 2025-05-30T02:54:39,048 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-05-30T02:54:39,048 ******************************************************************************** 2025-05-30T02:54:39,049 !! 2025-05-30T02:54:39,050 self._finalize_license_expression() 2025-05-30T02:54:39,050 running bdist_wheel 2025-05-30T02:54:39,125 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:135: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated 2025-05-30T02:54:39,126 !! 2025-05-30T02:54:39,127 ******************************************************************************** 2025-05-30T02:54:39,127 With Python 2.7 end-of-life, support for building universal wheels 2025-05-30T02:54:39,128 (i.e., wheels that support both Python 2 and Python 3) 2025-05-30T02:54:39,128 is being obviated. 2025-05-30T02:54:39,129 Please discontinue using this option, or if you still need it, 2025-05-30T02:54:39,129 file an issue with pypa/setuptools describing your use case. 2025-05-30T02:54:39,131 By 2025-Aug-30, you need to update your project and remove deprecated calls 2025-05-30T02:54:39,131 or your builds will no longer be supported. 2025-05-30T02:54:39,132 ******************************************************************************** 2025-05-30T02:54:39,133 !! 2025-05-30T02:54:39,133 self.finalize_options() 2025-05-30T02:54:39,179 running build 2025-05-30T02:54:39,180 running build_py 2025-05-30T02:54:39,209 creating build/lib/rcsb 2025-05-30T02:54:39,212 copying rcsb/__init__.py -> build/lib/rcsb 2025-05-30T02:54:39,214 creating build/lib/rcsb/utils 2025-05-30T02:54:39,215 copying rcsb/utils/__init__.py -> build/lib/rcsb/utils 2025-05-30T02:54:39,218 creating build/lib/rcsb/utils/chem 2025-05-30T02:54:39,219 copying rcsb/utils/chem/PdbxChemCompConstants.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,221 copying rcsb/utils/chem/OeMoleculeFactory.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,225 copying rcsb/utils/chem/FailList.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,230 copying rcsb/utils/chem/OeAlignUtils.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,233 copying rcsb/utils/chem/ChemAxonDescriptorProvider.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,235 copying rcsb/utils/chem/__init__.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,237 copying rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,239 copying rcsb/utils/chem/OeSubStructSearchUtils.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,241 copying rcsb/utils/chem/ChemCompSearchWrapper.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,244 copying rcsb/utils/chem/cactvsAnnotateMol.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,246 copying rcsb/utils/chem/MolecularFormula.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,248 copying rcsb/utils/chem/OeSearchUtils.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,250 copying rcsb/utils/chem/OeDepict.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,252 copying rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,255 copying rcsb/utils/chem/ChemCompDepictWrapper.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,257 copying rcsb/utils/chem/OeCommonUtils.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,259 copying rcsb/utils/chem/RdMoleculeFactory.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,261 copying rcsb/utils/chem/OeChemCompUtils.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,263 copying rcsb/utils/chem/OeDepictAlign.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,266 copying rcsb/utils/chem/ObMoleculeFactory.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,268 copying rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,271 copying rcsb/utils/chem/PdbxChemComp.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,273 copying rcsb/utils/chem/BatchChemSearch.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,275 copying rcsb/utils/chem/ChemCompIndexProvider.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,278 copying rcsb/utils/chem/OeMoleculeProvider.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,280 copying rcsb/utils/chem/OeIoUtils.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,283 copying rcsb/utils/chem/CactvsMoleculeFactory.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,285 copying rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,288 copying rcsb/utils/chem/IoUtils.py -> build/lib/rcsb/utils/chem 2025-05-30T02:54:39,323 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-05-30T02:54:39,324 !! 2025-05-30T02:54:39,325 ******************************************************************************** 2025-05-30T02:54:39,326 Please avoid running ``setup.py`` directly. 2025-05-30T02:54:39,326 Instead, use pypa/build, pypa/installer or other 2025-05-30T02:54:39,327 standards-based tools. 2025-05-30T02:54:39,328 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-05-30T02:54:39,329 or your builds will no longer be supported. 2025-05-30T02:54:39,330 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-05-30T02:54:39,330 ******************************************************************************** 2025-05-30T02:54:39,332 !! 2025-05-30T02:54:39,332 self.initialize_options() 2025-05-30T02:54:39,350 installing to build/bdist.linux-armv7l/wheel 2025-05-30T02:54:39,351 running install 2025-05-30T02:54:39,373 running install_lib 2025-05-30T02:54:39,400 creating build/bdist.linux-armv7l/wheel 2025-05-30T02:54:39,402 creating build/bdist.linux-armv7l/wheel/rcsb 2025-05-30T02:54:39,403 creating build/bdist.linux-armv7l/wheel/rcsb/utils 2025-05-30T02:54:39,404 copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils 2025-05-30T02:54:39,407 creating build/bdist.linux-armv7l/wheel/rcsb/utils/chem 2025-05-30T02:54:39,408 copying build/lib/rcsb/utils/chem/PdbxChemCompConstants.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,410 copying build/lib/rcsb/utils/chem/OeMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,413 copying build/lib/rcsb/utils/chem/FailList.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,417 copying build/lib/rcsb/utils/chem/OeAlignUtils.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,419 copying build/lib/rcsb/utils/chem/ChemAxonDescriptorProvider.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,422 copying build/lib/rcsb/utils/chem/__init__.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,423 copying build/lib/rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,425 copying build/lib/rcsb/utils/chem/OeSubStructSearchUtils.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,428 copying build/lib/rcsb/utils/chem/ChemCompSearchWrapper.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,431 copying build/lib/rcsb/utils/chem/cactvsAnnotateMol.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,432 copying build/lib/rcsb/utils/chem/MolecularFormula.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,435 copying build/lib/rcsb/utils/chem/OeSearchUtils.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,437 copying build/lib/rcsb/utils/chem/OeDepict.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,439 copying build/lib/rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,442 copying build/lib/rcsb/utils/chem/ChemCompDepictWrapper.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,444 copying build/lib/rcsb/utils/chem/OeCommonUtils.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,446 copying build/lib/rcsb/utils/chem/RdMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,448 copying build/lib/rcsb/utils/chem/OeChemCompUtils.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,450 copying build/lib/rcsb/utils/chem/OeDepictAlign.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,453 copying build/lib/rcsb/utils/chem/ObMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,455 copying build/lib/rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,458 copying build/lib/rcsb/utils/chem/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,460 copying build/lib/rcsb/utils/chem/BatchChemSearch.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,462 copying build/lib/rcsb/utils/chem/ChemCompIndexProvider.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,464 copying build/lib/rcsb/utils/chem/OeMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,467 copying build/lib/rcsb/utils/chem/OeIoUtils.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,469 copying build/lib/rcsb/utils/chem/CactvsMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,471 copying build/lib/rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,474 copying build/lib/rcsb/utils/chem/IoUtils.py -> build/bdist.linux-armv7l/wheel/./rcsb/utils/chem 2025-05-30T02:54:39,476 copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/./rcsb 2025-05-30T02:54:39,478 running install_egg_info 2025-05-30T02:54:39,511 running egg_info 2025-05-30T02:54:39,539 writing rcsb.utils.chem.egg-info/PKG-INFO 2025-05-30T02:54:39,543 writing dependency_links to rcsb.utils.chem.egg-info/dependency_links.txt 2025-05-30T02:54:39,545 writing entry points to rcsb.utils.chem.egg-info/entry_points.txt 2025-05-30T02:54:39,546 writing requirements to rcsb.utils.chem.egg-info/requires.txt 2025-05-30T02:54:39,548 writing top-level names to rcsb.utils.chem.egg-info/top_level.txt 2025-05-30T02:54:39,582 reading manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt' 2025-05-30T02:54:39,586 reading manifest template 'MANIFEST.in' 2025-05-30T02:54:39,587 adding license file 'LICENSE' 2025-05-30T02:54:39,591 writing manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt' 2025-05-30T02:54:39,592 Copying rcsb.utils.chem.egg-info to build/bdist.linux-armv7l/wheel/./rcsb.utils.chem-0.84-py3.11.egg-info 2025-05-30T02:54:39,605 running install_scripts 2025-05-30T02:54:39,619 creating build/bdist.linux-armv7l/wheel/rcsb_utils_chem-0.84.dist-info/WHEEL 2025-05-30T02:54:39,622 creating '/tmp/pip-wheel-6nkdvl8k/rcsb_utils_chem-0.84-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-05-30T02:54:39,624 adding 'rcsb/__init__.py' 2025-05-30T02:54:39,625 adding 'rcsb/utils/__init__.py' 2025-05-30T02:54:39,628 adding 'rcsb/utils/chem/BatchChemSearch.py' 2025-05-30T02:54:39,630 adding 'rcsb/utils/chem/CactvsMoleculeFactory.py' 2025-05-30T02:54:39,632 adding 'rcsb/utils/chem/ChemAxonDescriptorProvider.py' 2025-05-30T02:54:39,634 adding 'rcsb/utils/chem/ChemCompDepictWrapper.py' 2025-05-30T02:54:39,635 adding 'rcsb/utils/chem/ChemCompIndexProvider.py' 2025-05-30T02:54:39,637 adding 'rcsb/utils/chem/ChemCompMoleculeProvider.py' 2025-05-30T02:54:39,639 adding 'rcsb/utils/chem/ChemCompSearchIndexProvider.py' 2025-05-30T02:54:39,642 adding 'rcsb/utils/chem/ChemCompSearchWrapper.py' 2025-05-30T02:54:39,648 adding 'rcsb/utils/chem/FailList.py' 2025-05-30T02:54:39,650 adding 'rcsb/utils/chem/IoUtils.py' 2025-05-30T02:54:39,651 adding 'rcsb/utils/chem/MolecularFormula.py' 2025-05-30T02:54:39,653 adding 'rcsb/utils/chem/MoleculeAnnotationsCompare.py' 2025-05-30T02:54:39,655 adding 'rcsb/utils/chem/ObMoleculeFactory.py' 2025-05-30T02:54:39,657 adding 'rcsb/utils/chem/OeAlignUtils.py' 2025-05-30T02:54:39,659 adding 'rcsb/utils/chem/OeChemCompUtils.py' 2025-05-30T02:54:39,660 adding 'rcsb/utils/chem/OeCommonUtils.py' 2025-05-30T02:54:39,662 adding 'rcsb/utils/chem/OeDepict.py' 2025-05-30T02:54:39,666 adding 'rcsb/utils/chem/OeDepictAlign.py' 2025-05-30T02:54:39,669 adding 'rcsb/utils/chem/OeIoUtils.py' 2025-05-30T02:54:39,674 adding 'rcsb/utils/chem/OeMoleculeFactory.py' 2025-05-30T02:54:39,676 adding 'rcsb/utils/chem/OeMoleculeProvider.py' 2025-05-30T02:54:39,678 adding 'rcsb/utils/chem/OeSearchMoleculeProvider.py' 2025-05-30T02:54:39,680 adding 'rcsb/utils/chem/OeSearchUtils.py' 2025-05-30T02:54:39,682 adding 'rcsb/utils/chem/OeSubStructSearchUtils.py' 2025-05-30T02:54:39,684 adding 'rcsb/utils/chem/PdbxChemComp.py' 2025-05-30T02:54:39,685 adding 'rcsb/utils/chem/PdbxChemCompConstants.py' 2025-05-30T02:54:39,687 adding 'rcsb/utils/chem/RdMoleculeFactory.py' 2025-05-30T02:54:39,688 adding 'rcsb/utils/chem/__init__.py' 2025-05-30T02:54:39,689 adding 'rcsb/utils/chem/cactvsAnnotateMol.py' 2025-05-30T02:54:39,693 adding 'rcsb_utils_chem-0.84.dist-info/licenses/LICENSE' 2025-05-30T02:54:39,694 adding 'rcsb_utils_chem-0.84.dist-info/METADATA' 2025-05-30T02:54:39,695 adding 'rcsb_utils_chem-0.84.dist-info/WHEEL' 2025-05-30T02:54:39,696 adding 'rcsb_utils_chem-0.84.dist-info/entry_points.txt' 2025-05-30T02:54:39,697 adding 'rcsb_utils_chem-0.84.dist-info/top_level.txt' 2025-05-30T02:54:39,698 adding 'rcsb_utils_chem-0.84.dist-info/RECORD' 2025-05-30T02:54:39,701 removing build/bdist.linux-armv7l/wheel 2025-05-30T02:54:39,820 Building wheel for rcsb-utils-chem (setup.py): finished with status 'done' 2025-05-30T02:54:39,824 Created wheel for rcsb-utils-chem: filename=rcsb_utils_chem-0.84-py2.py3-none-any.whl size=103206 sha256=55109b67802230f5ade5962d46f6575b1398013a138825f1c9ad015bb194b96a 2025-05-30T02:54:39,825 Stored in directory: /tmp/pip-ephem-wheel-cache-l8ofe7b1/wheels/d9/d3/de/199c2f155012aaf457645b9adf124be9c823c32a5fc1508226 2025-05-30T02:54:39,837 Successfully built rcsb-utils-chem 2025-05-30T02:54:39,844 Removed build tracker: '/tmp/pip-build-tracker-o7olfe2i'