2025-09-02T16:04:15,404 Created temporary directory: /tmp/pip-build-tracker-fu274630 2025-09-02T16:04:15,405 Initialized build tracking at /tmp/pip-build-tracker-fu274630 2025-09-02T16:04:15,406 Created build tracker: /tmp/pip-build-tracker-fu274630 2025-09-02T16:04:15,406 Entered build tracker: /tmp/pip-build-tracker-fu274630 2025-09-02T16:04:15,407 Created temporary directory: /tmp/pip-wheel-dimlhmys 2025-09-02T16:04:15,411 Created temporary directory: /tmp/pip-ephem-wheel-cache-j76an6h_ 2025-09-02T16:04:15,459 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-02T16:04:15,462 2 location(s) to search for versions of em-map-utils: 2025-09-02T16:04:15,462 * https://pypi.org/simple/em-map-utils/ 2025-09-02T16:04:15,462 * https://www.piwheels.org/simple/em-map-utils/ 2025-09-02T16:04:15,462 Fetching project page and analyzing links: https://pypi.org/simple/em-map-utils/ 2025-09-02T16:04:15,463 Getting page https://pypi.org/simple/em-map-utils/ 2025-09-02T16:04:15,465 Found index url https://pypi.org/simple/ 2025-09-02T16:04:15,618 Fetched page https://pypi.org/simple/em-map-utils/ as application/vnd.pypi.simple.v1+json 2025-09-02T16:04:15,620 Found link https://files.pythonhosted.org/packages/5c/b6/a17cbb48d9bc6a62739c97033aa51ba5196d704defc279ccd4f4aeb969c5/em-map-utils-0.0.0.tar.gz (from https://pypi.org/simple/em-map-utils/), version: 0.0.0 2025-09-02T16:04:15,620 Found link https://files.pythonhosted.org/packages/42/f1/eff45b58b2de6c53ef67a7cc199fbc57386dbf17647ab19dd7f14a85c66d/em-map-utils-0.0.1.tar.gz (from https://pypi.org/simple/em-map-utils/), version: 0.0.1 2025-09-02T16:04:15,621 Fetching project page and analyzing links: https://www.piwheels.org/simple/em-map-utils/ 2025-09-02T16:04:15,622 Getting page https://www.piwheels.org/simple/em-map-utils/ 2025-09-02T16:04:15,623 Found index url https://www.piwheels.org/simple/ 2025-09-02T16:04:15,791 Fetched page https://www.piwheels.org/simple/em-map-utils/ as text/html 2025-09-02T16:04:15,792 Skipping link: No binaries permitted for em-map-utils: https://www.piwheels.org/simple/em-map-utils/em_map_utils-0.0.0-py3-none-any.whl#sha256=7fe227a95ef244797a3d60d719815ab2999799567ed5909347056d138b90401e (from https://www.piwheels.org/simple/em-map-utils/) 2025-09-02T16:04:15,793 Skipping link: not a file: https://www.piwheels.org/simple/em-map-utils/ 2025-09-02T16:04:15,794 Skipping link: not a file: https://pypi.org/simple/em-map-utils/ 2025-09-02T16:04:15,813 Given no hashes to check 1 links for project 'em-map-utils': discarding no candidates 2025-09-02T16:04:15,815 Collecting em-map-utils==0.0.1 2025-09-02T16:04:15,817 Created temporary directory: /tmp/pip-unpack-oufq5hll 2025-09-02T16:04:16,034 Downloading em-map-utils-0.0.1.tar.gz (27 kB) 2025-09-02T16:04:16,118 Added em-map-utils==0.0.1 from https://files.pythonhosted.org/packages/42/f1/eff45b58b2de6c53ef67a7cc199fbc57386dbf17647ab19dd7f14a85c66d/em-map-utils-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-fu274630' 2025-09-02T16:04:16,121 Running setup.py (path:/tmp/pip-wheel-dimlhmys/em-map-utils_5fe86fb63cd1406a957348ea98bd884b/setup.py) egg_info for package em-map-utils 2025-09-02T16:04:16,122 Created temporary directory: /tmp/pip-pip-egg-info-_9pwklu_ 2025-09-02T16:04:16,122 Preparing metadata (setup.py): started 2025-09-02T16:04:16,123 Running command python setup.py egg_info 2025-09-02T16:04:17,419 running egg_info 2025-09-02T16:04:17,448 creating /tmp/pip-pip-egg-info-_9pwklu_/em_map_utils.egg-info 2025-09-02T16:04:17,449 writing /tmp/pip-pip-egg-info-_9pwklu_/em_map_utils.egg-info/PKG-INFO 2025-09-02T16:04:17,453 writing dependency_links to /tmp/pip-pip-egg-info-_9pwklu_/em_map_utils.egg-info/dependency_links.txt 2025-09-02T16:04:17,455 writing top-level names to /tmp/pip-pip-egg-info-_9pwklu_/em_map_utils.egg-info/top_level.txt 2025-09-02T16:04:17,456 writing manifest file '/tmp/pip-pip-egg-info-_9pwklu_/em_map_utils.egg-info/SOURCES.txt' 2025-09-02T16:04:17,545 reading manifest file '/tmp/pip-pip-egg-info-_9pwklu_/em_map_utils.egg-info/SOURCES.txt' 2025-09-02T16:04:17,546 reading manifest template 'MANIFEST.in' 2025-09-02T16:04:17,556 adding license file 'LICENSE' 2025-09-02T16:04:17,559 writing manifest file '/tmp/pip-pip-egg-info-_9pwklu_/em_map_utils.egg-info/SOURCES.txt' 2025-09-02T16:04:17,662 Preparing metadata (setup.py): finished with status 'done' 2025-09-02T16:04:17,666 Source in /tmp/pip-wheel-dimlhmys/em-map-utils_5fe86fb63cd1406a957348ea98bd884b has version 0.0.1, which satisfies requirement em-map-utils==0.0.1 from https://files.pythonhosted.org/packages/42/f1/eff45b58b2de6c53ef67a7cc199fbc57386dbf17647ab19dd7f14a85c66d/em-map-utils-0.0.1.tar.gz 2025-09-02T16:04:17,667 Removed em-map-utils==0.0.1 from https://files.pythonhosted.org/packages/42/f1/eff45b58b2de6c53ef67a7cc199fbc57386dbf17647ab19dd7f14a85c66d/em-map-utils-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-fu274630' 2025-09-02T16:04:17,671 Created temporary directory: /tmp/pip-unpack-siw0r1pq 2025-09-02T16:04:17,672 Created temporary directory: /tmp/pip-unpack-kn1leo8l 2025-09-02T16:04:17,673 Building wheels for collected packages: em-map-utils 2025-09-02T16:04:17,677 Created temporary directory: /tmp/pip-wheel-33l6lit5 2025-09-02T16:04:17,677 DEPRECATION: Building 'em-map-utils' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'em-map-utils'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-02T16:04:17,679 Building wheel for em-map-utils (setup.py): started 2025-09-02T16:04:17,680 Destination directory: /tmp/pip-wheel-33l6lit5 2025-09-02T16:04:17,681 Running command python setup.py bdist_wheel 2025-09-02T16:04:19,169 running bdist_wheel 2025-09-02T16:04:19,303 running build 2025-09-02T16:04:19,304 running build_py 2025-09-02T16:04:19,333 creating build/lib/em-map-utils 2025-09-02T16:04:19,335 copying em-map-utils/filled_sphere.py -> build/lib/em-map-utils 2025-09-02T16:04:19,338 copying em-map-utils/map_covariance.py -> build/lib/em-map-utils 2025-09-02T16:04:19,340 copying em-map-utils/filled_cuboid.py -> build/lib/em-map-utils 2025-09-02T16:04:19,342 copying em-map-utils/download_emdb.py -> build/lib/em-map-utils 2025-09-02T16:04:19,345 copying em-map-utils/map_rotate.py -> build/lib/em-map-utils 2025-09-02T16:04:19,347 copying em-map-utils/filled_cylinder.py -> build/lib/em-map-utils 2025-09-02T16:04:19,349 copying em-map-utils/map_line_projections.py -> build/lib/em-map-utils 2025-09-02T16:04:19,352 copying em-map-utils/__init__.py -> build/lib/em-map-utils 2025-09-02T16:04:19,353 copying em-map-utils/util.py -> build/lib/em-map-utils 2025-09-02T16:04:19,355 copying em-map-utils/structure_size_and_shape.py -> build/lib/em-map-utils 2025-09-02T16:04:19,358 copying em-map-utils/map_threshold.py -> build/lib/em-map-utils 2025-09-02T16:04:19,360 copying em-map-utils/farm_function.py -> build/lib/em-map-utils 2025-09-02T16:04:19,364 creating build/lib/em-map-utils/demos 2025-09-02T16:04:19,365 copying em-map-utils/demos/demo_map_covariance.py -> build/lib/em-map-utils/demos 2025-09-02T16:04:19,367 copying em-map-utils/demos/demo_map_rotate.py -> build/lib/em-map-utils/demos 2025-09-02T16:04:19,370 copying em-map-utils/demos/demo_filled_cuboid.py -> build/lib/em-map-utils/demos 2025-09-02T16:04:19,372 copying em-map-utils/demos/demo_filled_cylinder.py -> build/lib/em-map-utils/demos 2025-09-02T16:04:19,374 copying em-map-utils/demos/__init__.py -> build/lib/em-map-utils/demos 2025-09-02T16:04:19,376 copying em-map-utils/demos/ortho_surface_views.py -> build/lib/em-map-utils/demos 2025-09-02T16:04:19,378 copying em-map-utils/demos/demo_map_line_projections.py -> build/lib/em-map-utils/demos 2025-09-02T16:04:19,380 copying em-map-utils/demos/demo_filled_sphere.py -> build/lib/em-map-utils/demos 2025-09-02T16:04:19,382 copying em-map-utils/demos/demo_farm_function.py -> build/lib/em-map-utils/demos 2025-09-02T16:04:19,414 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-02T16:04:19,415 !! 2025-09-02T16:04:19,415 ******************************************************************************** 2025-09-02T16:04:19,416 Please avoid running ``setup.py`` directly. 2025-09-02T16:04:19,416 Instead, use pypa/build, pypa/installer or other 2025-09-02T16:04:19,417 standards-based tools. 2025-09-02T16:04:19,418 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-02T16:04:19,418 or your builds will no longer be supported. 2025-09-02T16:04:19,419 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-02T16:04:19,420 ******************************************************************************** 2025-09-02T16:04:19,421 !! 2025-09-02T16:04:19,421 self.initialize_options() 2025-09-02T16:04:19,441 installing to build/bdist.linux-armv7l/wheel 2025-09-02T16:04:19,442 running install 2025-09-02T16:04:19,466 running install_lib 2025-09-02T16:04:19,492 creating build/bdist.linux-armv7l/wheel 2025-09-02T16:04:19,494 creating build/bdist.linux-armv7l/wheel/em-map-utils 2025-09-02T16:04:19,495 copying build/lib/em-map-utils/filled_sphere.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,497 copying build/lib/em-map-utils/map_covariance.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,500 copying build/lib/em-map-utils/filled_cuboid.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,502 copying build/lib/em-map-utils/download_emdb.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,505 copying build/lib/em-map-utils/map_rotate.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,508 copying build/lib/em-map-utils/filled_cylinder.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,510 creating build/bdist.linux-armv7l/wheel/em-map-utils/demos 2025-09-02T16:04:19,512 copying build/lib/em-map-utils/demos/demo_map_covariance.py -> build/bdist.linux-armv7l/wheel/./em-map-utils/demos 2025-09-02T16:04:19,514 copying build/lib/em-map-utils/demos/demo_map_rotate.py -> build/bdist.linux-armv7l/wheel/./em-map-utils/demos 2025-09-02T16:04:19,516 copying build/lib/em-map-utils/demos/demo_filled_cuboid.py -> build/bdist.linux-armv7l/wheel/./em-map-utils/demos 2025-09-02T16:04:19,519 copying build/lib/em-map-utils/demos/demo_filled_cylinder.py -> build/bdist.linux-armv7l/wheel/./em-map-utils/demos 2025-09-02T16:04:19,521 copying build/lib/em-map-utils/demos/__init__.py -> build/bdist.linux-armv7l/wheel/./em-map-utils/demos 2025-09-02T16:04:19,524 copying build/lib/em-map-utils/demos/ortho_surface_views.py -> build/bdist.linux-armv7l/wheel/./em-map-utils/demos 2025-09-02T16:04:19,526 copying build/lib/em-map-utils/demos/demo_map_line_projections.py -> build/bdist.linux-armv7l/wheel/./em-map-utils/demos 2025-09-02T16:04:19,528 copying build/lib/em-map-utils/demos/demo_filled_sphere.py -> build/bdist.linux-armv7l/wheel/./em-map-utils/demos 2025-09-02T16:04:19,531 copying build/lib/em-map-utils/demos/demo_farm_function.py -> build/bdist.linux-armv7l/wheel/./em-map-utils/demos 2025-09-02T16:04:19,533 copying build/lib/em-map-utils/map_line_projections.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,535 copying build/lib/em-map-utils/__init__.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,537 copying build/lib/em-map-utils/util.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,539 copying build/lib/em-map-utils/structure_size_and_shape.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,541 copying build/lib/em-map-utils/map_threshold.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,544 copying build/lib/em-map-utils/farm_function.py -> build/bdist.linux-armv7l/wheel/./em-map-utils 2025-09-02T16:04:19,546 running install_egg_info 2025-09-02T16:04:19,579 running egg_info 2025-09-02T16:04:19,606 writing em_map_utils.egg-info/PKG-INFO 2025-09-02T16:04:19,609 writing dependency_links to em_map_utils.egg-info/dependency_links.txt 2025-09-02T16:04:19,611 writing top-level names to em_map_utils.egg-info/top_level.txt 2025-09-02T16:04:19,643 reading manifest file 'em_map_utils.egg-info/SOURCES.txt' 2025-09-02T16:04:19,646 reading manifest template 'MANIFEST.in' 2025-09-02T16:04:19,660 adding license file 'LICENSE' 2025-09-02T16:04:19,663 writing manifest file 'em_map_utils.egg-info/SOURCES.txt' 2025-09-02T16:04:19,665 Copying em_map_utils.egg-info to build/bdist.linux-armv7l/wheel/./em_map_utils-0.0.1-py3.11.egg-info 2025-09-02T16:04:19,673 running install_scripts 2025-09-02T16:04:19,686 creating build/bdist.linux-armv7l/wheel/em_map_utils-0.0.1.dist-info/WHEEL 2025-09-02T16:04:19,688 creating '/tmp/pip-wheel-33l6lit5/em_map_utils-0.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-02T16:04:19,691 adding 'em-map-utils/__init__.py' 2025-09-02T16:04:19,692 adding 'em-map-utils/download_emdb.py' 2025-09-02T16:04:19,695 adding 'em-map-utils/farm_function.py' 2025-09-02T16:04:19,696 adding 'em-map-utils/filled_cuboid.py' 2025-09-02T16:04:19,698 adding 'em-map-utils/filled_cylinder.py' 2025-09-02T16:04:19,699 adding 'em-map-utils/filled_sphere.py' 2025-09-02T16:04:19,701 adding 'em-map-utils/map_covariance.py' 2025-09-02T16:04:19,703 adding 'em-map-utils/map_line_projections.py' 2025-09-02T16:04:19,704 adding 'em-map-utils/map_rotate.py' 2025-09-02T16:04:19,706 adding 'em-map-utils/map_threshold.py' 2025-09-02T16:04:19,708 adding 'em-map-utils/structure_size_and_shape.py' 2025-09-02T16:04:19,709 adding 'em-map-utils/util.py' 2025-09-02T16:04:19,711 adding 'em-map-utils/demos/__init__.py' 2025-09-02T16:04:19,712 adding 'em-map-utils/demos/demo_farm_function.py' 2025-09-02T16:04:19,713 adding 'em-map-utils/demos/demo_filled_cuboid.py' 2025-09-02T16:04:19,715 adding 'em-map-utils/demos/demo_filled_cylinder.py' 2025-09-02T16:04:19,716 adding 'em-map-utils/demos/demo_filled_sphere.py' 2025-09-02T16:04:19,718 adding 'em-map-utils/demos/demo_map_covariance.py' 2025-09-02T16:04:19,719 adding 'em-map-utils/demos/demo_map_line_projections.py' 2025-09-02T16:04:19,720 adding 'em-map-utils/demos/demo_map_rotate.py' 2025-09-02T16:04:19,722 adding 'em-map-utils/demos/ortho_surface_views.py' 2025-09-02T16:04:19,725 adding 'em_map_utils-0.0.1.dist-info/licenses/LICENSE' 2025-09-02T16:04:19,726 adding 'em_map_utils-0.0.1.dist-info/METADATA' 2025-09-02T16:04:19,727 adding 'em_map_utils-0.0.1.dist-info/WHEEL' 2025-09-02T16:04:19,728 adding 'em_map_utils-0.0.1.dist-info/top_level.txt' 2025-09-02T16:04:19,729 adding 'em_map_utils-0.0.1.dist-info/RECORD' 2025-09-02T16:04:19,731 removing build/bdist.linux-armv7l/wheel 2025-09-02T16:04:19,844 Building wheel for em-map-utils (setup.py): finished with status 'done' 2025-09-02T16:04:19,847 Created wheel for em-map-utils: filename=em_map_utils-0.0.1-py3-none-any.whl size=40634 sha256=9b152cb62d91b370b8c57dd83c32e1a402a1d19f2711e7c622938e5a7c30f208 2025-09-02T16:04:19,848 Stored in directory: /tmp/pip-ephem-wheel-cache-j76an6h_/wheels/74/f3/b0/b8449f33bc162259cfc9917d958061c9ce3ee4cdaf69bc0054 2025-09-02T16:04:20,071 Successfully built em-map-utils 2025-09-02T16:04:20,078 Removed build tracker: '/tmp/pip-build-tracker-fu274630'