2025-09-02T17:09:03,293 Created temporary directory: /tmp/pip-build-tracker-wz2dxgyg 2025-09-02T17:09:03,294 Initialized build tracking at /tmp/pip-build-tracker-wz2dxgyg 2025-09-02T17:09:03,294 Created build tracker: /tmp/pip-build-tracker-wz2dxgyg 2025-09-02T17:09:03,295 Entered build tracker: /tmp/pip-build-tracker-wz2dxgyg 2025-09-02T17:09:03,296 Created temporary directory: /tmp/pip-wheel-5k6592gk 2025-09-02T17:09:03,300 Created temporary directory: /tmp/pip-ephem-wheel-cache-gtz3eqfu 2025-09-02T17:09:03,357 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-02T17:09:03,359 2 location(s) to search for versions of straindesign: 2025-09-02T17:09:03,359 * https://pypi.org/simple/straindesign/ 2025-09-02T17:09:03,359 * https://www.piwheels.org/simple/straindesign/ 2025-09-02T17:09:03,360 Fetching project page and analyzing links: https://pypi.org/simple/straindesign/ 2025-09-02T17:09:03,361 Getting page https://pypi.org/simple/straindesign/ 2025-09-02T17:09:03,362 Found index url https://pypi.org/simple/ 2025-09-02T17:09:03,593 Fetched page https://pypi.org/simple/straindesign/ as application/vnd.pypi.simple.v1+json 2025-09-02T17:09:03,605 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/4f/ca/0632774bf16f658c724bcefa47540fafde0665672f24bd621ee49a6bb202/straindesign-0.1-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,607 Found link https://files.pythonhosted.org/packages/8b/28/eb055298ca2ec120b412ced0e27fda384fd320cb5146bc90f559789b9579/straindesign-0.1.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 0.1 2025-09-02T17:09:03,608 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/a5/88/d071927aa6162799c594ed6e2cd17e412a2f923c088daba35beecbc4fd61/straindesign-0.2-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,608 Found link https://files.pythonhosted.org/packages/a1/44/8eb5efa777c2873bd7d303a2376f6b4a6d9eb28dc2c52f505d6363d59f3b/straindesign-0.2.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 0.2 2025-09-02T17:09:03,609 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/5b/b7/37aff9e54cf2beb24638cba75611b92aad32a26f89f4e9e56f907c60f1be/straindesign-1.0-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,610 Found link https://files.pythonhosted.org/packages/4c/74/cd284247353e42da873daa2bcbbf212283bff6f80c63b8b757c0e6e308a8/straindesign-1.0.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.0 2025-09-02T17:09:03,611 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/24/cf/0e974fff3b245339b2d087859d8ecf18a2227245f88f1ca02c7d8a61dd24/straindesign-1.1-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,611 Found link https://files.pythonhosted.org/packages/58/43/d543512a33e0ea7cfbb1dc9083bffadb390aed4d06fc02c9493f50ba9d9b/straindesign-1.1.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.1 2025-09-02T17:09:03,612 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/e8/56/c4a5e9374b3be30232e81bd5963736e48013cf4a6be8bd8216cc12863531/straindesign-1.2-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,613 Found link https://files.pythonhosted.org/packages/e1/31/4aaf57ac3fc2ae320f2d9e8909bc7a9b7cc777cc3e8e293e295dfa05c088/straindesign-1.2.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.2 2025-09-02T17:09:03,614 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/36/d4/9517e96f7d455e1b13260cad32dffd2395c4026be3ead7c48a2689f6a8c5/straindesign-1.3-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,614 Found link https://files.pythonhosted.org/packages/78/0d/558b9cf275d02cce00dd8921cc2083face2cbf9a1e6e43c985279fc72742/straindesign-1.3.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.3 2025-09-02T17:09:03,615 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/df/8e/a94aaaa8f3b70bc43ad1b5e50cbbb73a7b7c5bca30c015b853426ad520e5/straindesign-1.4.1-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,616 Found link https://files.pythonhosted.org/packages/66/85/b7ec43b1d65ce056cbd7f5c8fa853ed4a4cb502cd9edcdfbbb3dcea510ff/straindesign-1.4.1.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.4.1 2025-09-02T17:09:03,616 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/34/a2/7d7be7f9db9c205b5f2802773644bf367cc32b179831eea7c32eb0cf9167/straindesign-1.5-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,617 Found link https://files.pythonhosted.org/packages/ef/3d/06d171bd58416cec3dcea5118ceda84d28dcee9bc192805c845bdc4fa589/straindesign-1.5.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.5 2025-09-02T17:09:03,618 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/48/f6/0ce53b413df493de1dae14ab119d7179d26c58198dbb93ee0f88890cc446/straindesign-1.6-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,618 Found link https://files.pythonhosted.org/packages/75/4a/3f889442f4625b1df37e604efc54ecc7d9937feef99c729e69594ae5cb7b/straindesign-1.6.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.6 2025-09-02T17:09:03,619 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/a2/40/95c3b2f15ac8200add9699ef370aa796139086d879ab607af2bfe7dc1265/straindesign-1.7-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,620 Found link https://files.pythonhosted.org/packages/64/0f/629cdcd2618500e95b965f5f1b9bbc33ad535382c3d1acd0db9b5013acce/straindesign-1.7.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.7 2025-09-02T17:09:03,620 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/a4/f6/2b11b92cad5df2d1d2a2be3b96ace1652fd29539379bfb6fe71bf124c895/straindesign-1.8-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,621 Found link https://files.pythonhosted.org/packages/26/8d/fb0ecc16109fbf050939d9ed4110cbe6f80cd26ddca221cb3aa91b52473b/straindesign-1.8.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.8 2025-09-02T17:09:03,622 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/a4/36/622e5a5af4df05f070009a0acf8e0744f55d4f10faaa1178796ab135ca13/straindesign-1.9-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,622 Found link https://files.pythonhosted.org/packages/63/0e/1099d9ed1bc90df63d09cd2903a72a6c37b4d95e5055a1982cdb9d99e32f/straindesign-1.9.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.9 2025-09-02T17:09:03,623 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/fe/11/0934ccd8e6613e9878738d38535a1a4b7a23dba30b1d6cad255a9d1355a2/straindesign-1.10-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,624 Found link https://files.pythonhosted.org/packages/0d/e1/00cca416f2b14417d4fd0907c54fefb6ba516350111cfd800d34d5d2e101/straindesign-1.10.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.10 2025-09-02T17:09:03,625 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/a1/e1/7f32f9927ad296ecffb15de41661fe3814cc6cb82a38a017982d95925b27/straindesign-1.11-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,625 Found link https://files.pythonhosted.org/packages/e2/a2/a05c0a70706d8eca37718f876b6a72ce90659919318d1d61b166afe07c6e/straindesign-1.11.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.11 2025-09-02T17:09:03,626 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/c9/56/8463d330cf29fcb571627e946fad9bb75aba8b9c542fd75e0d68c98086b0/straindesign-1.12-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,627 Found link https://files.pythonhosted.org/packages/1e/08/12dfafc66199849d771382604af58a22480fb128fe595b6a91dc32f439cf/straindesign-1.12.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.12 2025-09-02T17:09:03,627 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/f4/b8/4d2832660a0ec08ba488b619ec23f2774ad748a9e4abcd411b4cdf494deb/straindesign-1.13-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,628 Found link https://files.pythonhosted.org/packages/b5/db/02c13fce9ac674f20945fe70b3378c8873ab74e4fae3ee73cedfb8715865/straindesign-1.13.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.13 2025-09-02T17:09:03,628 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/1b/77/e6cd986c0eb9a82eb28ccadf0f30ae3af0281336c4d5c565fd8d943a32d3/straindesign-1.14-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,629 Found link https://files.pythonhosted.org/packages/af/d4/0d65ce4c54169c101c2cdb80985f6aa463c08331b6bdd269c030beff657b/straindesign-1.14.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.14 2025-09-02T17:09:03,630 Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/d4/bf/af9ce37f8e94bb405cfcf75db6f11eacde265752e1089e4575b2fd9ef04a/straindesign-1.15-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,631 Found link https://files.pythonhosted.org/packages/bc/9d/5baab090ddd94fb68c3d6bba7bcf155d55c66a4148f31a101f7b325594ea/straindesign-1.15.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.15 2025-09-02T17:09:03,631 Fetching project page and analyzing links: https://www.piwheels.org/simple/straindesign/ 2025-09-02T17:09:03,632 Getting page https://www.piwheels.org/simple/straindesign/ 2025-09-02T17:09:03,634 Found index url https://www.piwheels.org/simple/ 2025-09-02T17:09:03,813 Fetched page https://www.piwheels.org/simple/straindesign/ as text/html 2025-09-02T17:09:03,817 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.13-py3-none-any.whl#sha256=eb0f2c94297cbbd28d6f09ca617daf096909f9ead341395248bc6141076d6830 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,818 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.12-py3-none-any.whl#sha256=d3748342f46ddea629d3f1bff51edf456270079d767860032a40467f0880452b (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,819 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.11-py3-none-any.whl#sha256=fa8d372cd593f306675fc2beb45e44181836e519f36f2892291c9164de844d01 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,819 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.10-py3-none-any.whl#sha256=10c84be708032d3c6c2b1de111df679942e0ed752791570d1a59bb0cd45f6c05 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,820 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.9-py3-none-any.whl#sha256=827a3eaf69170ec5db9f02e4163c2e6f844fca2744d5da0f7d031584090c960f (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,820 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.8-py3-none-any.whl#sha256=2e72152dec6745a0a5468a5a5b0590e95c053e79e1a55f00f54365d7fc547c11 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,821 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.7-py3-none-any.whl#sha256=652b29208da576e86b5eb0dbaafd63da2b681485116007eb6339e31f273cf9ca (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,821 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.6-py3-none-any.whl#sha256=b76affbd9dc29b7ecde012f72c84e2294775a5395908ef1a6d62573cecaa5f1e (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,822 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.5-py3-none-any.whl#sha256=51c84ac7b8a5d9ca57f62ada3ae9fbde1c52c5a09b4579491ff90545237a112a (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,822 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.4.1-py3-none-any.whl#sha256=e1f4c8053ded340fe7cb80716b46d19041c9e9f70bea245e052e3ba7a0e954d0 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,823 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.3-py3-none-any.whl#sha256=934cfbb9fdd8d9e77268112390d4813818bb345af3858e50223229f72bb38aa4 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,823 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.2-py3-none-any.whl#sha256=9ef7d7da824fcb6a8b9f697e8680284eb11240087991788ffd560a4f8bcee123 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,824 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.1-py3-none-any.whl#sha256=bbd2e1331957941be51c3fe329f71ad5be6d7de5b04efd399ed905aa10810fab (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,824 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-1.0-py3-none-any.whl#sha256=927577542ed49e36db661b99af1883c84b7a8d3ba6e50844bc5b1e1d7809141d (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,825 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-0.2-py3-none-any.whl#sha256=c29f957858865c736cfd17ad90f552e06f9edbe2ff98672fa136b296cf64c3a7 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,825 Skipping link: No binaries permitted for straindesign: https://archive1.piwheels.org/simple/straindesign/straindesign-0.1-py3-none-any.whl#sha256=2b4ae128601ffddfc38397e08e900f50d782984a3b9bae71da4d09b27b45054b (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7) 2025-09-02T17:09:03,826 Skipping link: not a file: https://www.piwheels.org/simple/straindesign/ 2025-09-02T17:09:03,827 Skipping link: not a file: https://pypi.org/simple/straindesign/ 2025-09-02T17:09:03,855 Given no hashes to check 1 links for project 'straindesign': discarding no candidates 2025-09-02T17:09:03,857 Collecting straindesign==1.15 2025-09-02T17:09:03,859 Created temporary directory: /tmp/pip-unpack-citn57ls 2025-09-02T17:09:04,098 Downloading straindesign-1.15.tar.gz (2.2 MB) 2025-09-02T17:09:04,615 Added straindesign==1.15 from https://files.pythonhosted.org/packages/bc/9d/5baab090ddd94fb68c3d6bba7bcf155d55c66a4148f31a101f7b325594ea/straindesign-1.15.tar.gz to build tracker '/tmp/pip-build-tracker-wz2dxgyg' 2025-09-02T17:09:04,617 Running setup.py (path:/tmp/pip-wheel-5k6592gk/straindesign_74956ec29fc342c884278ea1771096bc/setup.py) egg_info for package straindesign 2025-09-02T17:09:04,618 Created temporary directory: /tmp/pip-pip-egg-info-q8als03s 2025-09-02T17:09:04,619 Preparing metadata (setup.py): started 2025-09-02T17:09:04,620 Running command python setup.py egg_info 2025-09-02T17:09:05,545 running egg_info 2025-09-02T17:09:05,574 creating /tmp/pip-pip-egg-info-q8als03s/straindesign.egg-info 2025-09-02T17:09:05,575 writing /tmp/pip-pip-egg-info-q8als03s/straindesign.egg-info/PKG-INFO 2025-09-02T17:09:05,579 writing dependency_links to /tmp/pip-pip-egg-info-q8als03s/straindesign.egg-info/dependency_links.txt 2025-09-02T17:09:05,581 writing requirements to /tmp/pip-pip-egg-info-q8als03s/straindesign.egg-info/requires.txt 2025-09-02T17:09:05,582 writing top-level names to /tmp/pip-pip-egg-info-q8als03s/straindesign.egg-info/top_level.txt 2025-09-02T17:09:05,583 writing manifest file '/tmp/pip-pip-egg-info-q8als03s/straindesign.egg-info/SOURCES.txt' 2025-09-02T17:09:05,676 reading manifest file '/tmp/pip-pip-egg-info-q8als03s/straindesign.egg-info/SOURCES.txt' 2025-09-02T17:09:05,678 adding license file 'LICENSE' 2025-09-02T17:09:05,682 writing manifest file '/tmp/pip-pip-egg-info-q8als03s/straindesign.egg-info/SOURCES.txt' 2025-09-02T17:09:05,786 Preparing metadata (setup.py): finished with status 'done' 2025-09-02T17:09:05,791 Source in /tmp/pip-wheel-5k6592gk/straindesign_74956ec29fc342c884278ea1771096bc has version 1.15, which satisfies requirement straindesign==1.15 from https://files.pythonhosted.org/packages/bc/9d/5baab090ddd94fb68c3d6bba7bcf155d55c66a4148f31a101f7b325594ea/straindesign-1.15.tar.gz 2025-09-02T17:09:05,792 Removed straindesign==1.15 from https://files.pythonhosted.org/packages/bc/9d/5baab090ddd94fb68c3d6bba7bcf155d55c66a4148f31a101f7b325594ea/straindesign-1.15.tar.gz from build tracker '/tmp/pip-build-tracker-wz2dxgyg' 2025-09-02T17:09:05,798 Created temporary directory: /tmp/pip-unpack-ydn4z7_x 2025-09-02T17:09:05,799 Created temporary directory: /tmp/pip-unpack-g16bx6il 2025-09-02T17:09:05,800 Building wheels for collected packages: straindesign 2025-09-02T17:09:05,804 Created temporary directory: /tmp/pip-wheel-xen2__iq 2025-09-02T17:09:05,804 DEPRECATION: Building 'straindesign' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'straindesign'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-02T17:09:05,806 Building wheel for straindesign (setup.py): started 2025-09-02T17:09:05,807 Destination directory: /tmp/pip-wheel-xen2__iq 2025-09-02T17:09:05,808 Running command python setup.py bdist_wheel 2025-09-02T17:09:06,648 running bdist_wheel 2025-09-02T17:09:06,784 running build 2025-09-02T17:09:06,784 running build_py 2025-09-02T17:09:06,840 creating build/lib/straindesign 2025-09-02T17:09:06,842 copying straindesign/scip_interface.py -> build/lib/straindesign 2025-09-02T17:09:06,845 copying straindesign/strainDesignSolutions.py -> build/lib/straindesign 2025-09-02T17:09:06,848 copying straindesign/parse_constr.py -> build/lib/straindesign 2025-09-02T17:09:06,851 copying straindesign/compute_strain_designs.py -> build/lib/straindesign 2025-09-02T17:09:06,853 copying straindesign/cplex_interface.py -> build/lib/straindesign 2025-09-02T17:09:06,856 copying straindesign/pool.py -> build/lib/straindesign 2025-09-02T17:09:06,858 copying straindesign/efmtool.py -> build/lib/straindesign 2025-09-02T17:09:06,861 copying straindesign/__init__.py -> build/lib/straindesign 2025-09-02T17:09:06,862 copying straindesign/indicatorConstraints.py -> build/lib/straindesign 2025-09-02T17:09:06,865 copying straindesign/gurobi_interface.py -> build/lib/straindesign 2025-09-02T17:09:06,867 copying straindesign/glpk_interface.py -> build/lib/straindesign 2025-09-02T17:09:06,870 copying straindesign/strainDesignMILP.py -> build/lib/straindesign 2025-09-02T17:09:06,873 copying straindesign/lptools.py -> build/lib/straindesign 2025-09-02T17:09:06,876 copying straindesign/strainDesignProblem.py -> build/lib/straindesign 2025-09-02T17:09:06,881 copying straindesign/solver_interface.py -> build/lib/straindesign 2025-09-02T17:09:06,883 copying straindesign/strainDesignModule.py -> build/lib/straindesign 2025-09-02T17:09:06,886 copying straindesign/names.py -> build/lib/straindesign 2025-09-02T17:09:06,889 copying straindesign/networktools.py -> build/lib/straindesign 2025-09-02T17:09:06,894 creating build/lib/tests 2025-09-02T17:09:06,895 copying tests/custom.py -> build/lib/tests 2025-09-02T17:09:06,897 copying tests/test_05_straindesign.py -> build/lib/tests 2025-09-02T17:09:06,900 copying tests/test_01_load_models_and_solvers.py -> build/lib/tests 2025-09-02T17:09:06,902 copying tests/__init__.py -> build/lib/tests 2025-09-02T17:09:06,904 copying tests/test_02_lp_optimization.py -> build/lib/tests 2025-09-02T17:09:06,906 copying tests/conftest.py -> build/lib/tests 2025-09-02T17:09:06,908 copying tests/test_03_plots.py -> build/lib/tests 2025-09-02T17:09:06,910 copying tests/test_06_multiprocessing.py -> build/lib/tests 2025-09-02T17:09:06,912 copying tests/test_04_preprocessing.py -> build/lib/tests 2025-09-02T17:09:06,916 copying straindesign/efmtool.jar -> build/lib/straindesign 2025-09-02T17:09:06,961 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-02T17:09:06,961 !! 2025-09-02T17:09:06,963 ******************************************************************************** 2025-09-02T17:09:06,963 Please avoid running ``setup.py`` directly. 2025-09-02T17:09:06,964 Instead, use pypa/build, pypa/installer or other 2025-09-02T17:09:06,964 standards-based tools. 2025-09-02T17:09:06,966 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-02T17:09:06,966 or your builds will no longer be supported. 2025-09-02T17:09:06,967 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-02T17:09:06,968 ******************************************************************************** 2025-09-02T17:09:06,969 !! 2025-09-02T17:09:06,970 self.initialize_options() 2025-09-02T17:09:06,992 installing to build/bdist.linux-armv7l/wheel 2025-09-02T17:09:06,992 running install 2025-09-02T17:09:07,016 Welcome to the straindesign installation process! 2025-09-02T17:09:07,219 Java not found. Attempting to install OpenJDK... 2025-09-02T17:09:07,222 install-jdk not found. Installing it now via pip... 2025-09-02T17:09:08,833 error: externally-managed-environment 2025-09-02T17:09:08,835 × This environment is externally managed 2025-09-02T17:09:08,836 ╰─> To install Python packages system-wide, try apt install 2025-09-02T17:09:08,836 python3-xyz, where xyz is the package you are trying to 2025-09-02T17:09:08,837 install. 2025-09-02T17:09:08,839 If you wish to install a non-Debian-packaged Python package, 2025-09-02T17:09:08,839 create a virtual environment using python3 -m venv path/to/venv. 2025-09-02T17:09:08,840 Then use path/to/venv/bin/python and path/to/venv/bin/pip. Make 2025-09-02T17:09:08,841 sure you have python3-full installed. 2025-09-02T17:09:08,842 For more information visit http://rptl.io/venv 2025-09-02T17:09:08,843 note: If you believe this is a mistake, please contact your Python installation or OS distribution provider. You can override this, at the risk of breaking your Python installation or OS, by passing --break-system-packages. 2025-09-02T17:09:08,843 hint: See PEP 668 for the detailed specification. 2025-09-02T17:09:08,990 Traceback (most recent call last): 2025-09-02T17:09:08,990 File "/tmp/pip-wheel-5k6592gk/straindesign_74956ec29fc342c884278ea1771096bc/setup.py", line 52, in install_openjdk 2025-09-02T17:09:08,991 import jdk 2025-09-02T17:09:08,991 ModuleNotFoundError: No module named 'jdk' 2025-09-02T17:09:08,992 During handling of the above exception, another exception occurred: 2025-09-02T17:09:08,993 Traceback (most recent call last): 2025-09-02T17:09:08,994 File "", line 2, in 2025-09-02T17:09:08,994 File "", line 35, in 2025-09-02T17:09:08,995 File "/tmp/pip-wheel-5k6592gk/straindesign_74956ec29fc342c884278ea1771096bc/setup.py", line 79, in 2025-09-02T17:09:08,995 setup( 2025-09-02T17:09:08,996 File "/usr/local/lib/python3.11/dist-packages/setuptools/__init__.py", line 115, in setup 2025-09-02T17:09:08,996 return distutils.core.setup(**attrs) 2025-09-02T17:09:08,996 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-02T17:09:08,997 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 186, in setup 2025-09-02T17:09:08,997 return run_commands(dist) 2025-09-02T17:09:08,998 ^^^^^^^^^^^^^^^^^^ 2025-09-02T17:09:08,998 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 202, in run_commands 2025-09-02T17:09:08,999 dist.run_commands() 2025-09-02T17:09:09,000 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 1002, in run_commands 2025-09-02T17:09:09,000 self.run_command(cmd) 2025-09-02T17:09:09,001 File "/usr/local/lib/python3.11/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-02T17:09:09,001 super().run_command(command) 2025-09-02T17:09:09,002 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-02T17:09:09,002 cmd_obj.run() 2025-09-02T17:09:09,003 File "/usr/local/lib/python3.11/dist-packages/setuptools/command/bdist_wheel.py", line 405, in run 2025-09-02T17:09:09,003 self.run_command("install") 2025-09-02T17:09:09,004 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py", line 357, in run_command 2025-09-02T17:09:09,005 self.distribution.run_command(command) 2025-09-02T17:09:09,005 File "/usr/local/lib/python3.11/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-02T17:09:09,006 super().run_command(command) 2025-09-02T17:09:09,007 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-02T17:09:09,008 cmd_obj.run() 2025-09-02T17:09:09,008 File "/tmp/pip-wheel-5k6592gk/straindesign_74956ec29fc342c884278ea1771096bc/setup.py", line 17, in run 2025-09-02T17:09:09,009 self.install_openjdk() 2025-09-02T17:09:09,010 File "/tmp/pip-wheel-5k6592gk/straindesign_74956ec29fc342c884278ea1771096bc/setup.py", line 55, in install_openjdk 2025-09-02T17:09:09,011 subprocess.check_call([sys.executable, "-m", "pip", "install", "install-jdk"]) 2025-09-02T17:09:09,012 File "/usr/lib/python3.11/subprocess.py", line 413, in check_call 2025-09-02T17:09:09,013 raise CalledProcessError(retcode, cmd) 2025-09-02T17:09:09,014 subprocess.CalledProcessError: Command '['/usr/bin/python3', '-m', 'pip', 'install', 'install-jdk']' returned non-zero exit status 1. 2025-09-02T17:09:09,114 ERROR: python setup.py bdist_wheel exited with 1 2025-09-02T17:09:09,127 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-02T17:09:09,127 exec(compile('"'"''"'"''"'"' 2025-09-02T17:09:09,127 # This is -- a caller that pip uses to run setup.py 2025-09-02T17:09:09,127 # 2025-09-02T17:09:09,127 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-02T17:09:09,127 # import from `distutils.core` to work with newer packaging standards. 2025-09-02T17:09:09,127 # - It provides a clear error message when setuptools is not installed. 2025-09-02T17:09:09,127 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-02T17:09:09,127 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-02T17:09:09,127 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-02T17:09:09,127 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-02T17:09:09,127 import os, sys, tokenize, traceback 2025-09-02T17:09:09,127 2025-09-02T17:09:09,127 try: 2025-09-02T17:09:09,127 import setuptools 2025-09-02T17:09:09,127 except ImportError: 2025-09-02T17:09:09,127 print( 2025-09-02T17:09:09,127 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-02T17:09:09,127 "the build environment with exception:", 2025-09-02T17:09:09,127 file=sys.stderr, 2025-09-02T17:09:09,127 ) 2025-09-02T17:09:09,127 traceback.print_exc() 2025-09-02T17:09:09,127 sys.exit(1) 2025-09-02T17:09:09,127 2025-09-02T17:09:09,127 __file__ = %r 2025-09-02T17:09:09,127 sys.argv[0] = __file__ 2025-09-02T17:09:09,127 2025-09-02T17:09:09,127 if os.path.exists(__file__): 2025-09-02T17:09:09,127 filename = __file__ 2025-09-02T17:09:09,127 with tokenize.open(__file__) as f: 2025-09-02T17:09:09,127 setup_py_code = f.read() 2025-09-02T17:09:09,127 else: 2025-09-02T17:09:09,127 filename = "" 2025-09-02T17:09:09,127 setup_py_code = "from setuptools import setup; setup()" 2025-09-02T17:09:09,127 2025-09-02T17:09:09,127 exec(compile(setup_py_code, filename, "exec")) 2025-09-02T17:09:09,127 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-5k6592gk/straindesign_74956ec29fc342c884278ea1771096bc/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-xen2__iq[/] 2025-09-02T17:09:09,128 [bold magenta]cwd[/]: /tmp/pip-wheel-5k6592gk/straindesign_74956ec29fc342c884278ea1771096bc/ 2025-09-02T17:09:09,128 Building wheel for straindesign (setup.py): finished with status 'error' 2025-09-02T17:09:09,129 ERROR: Failed building wheel for straindesign 2025-09-02T17:09:09,130 Running setup.py clean for straindesign 2025-09-02T17:09:09,131 Running command python setup.py clean 2025-09-02T17:09:09,986 running clean 2025-09-02T17:09:10,042 removing 'build/lib' (and everything under it) 2025-09-02T17:09:10,051 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-02T17:09:10,051 'build/scripts-3.11' does not exist -- can't clean it 2025-09-02T17:09:10,052 removing 'build' 2025-09-02T17:09:10,156 Failed to build straindesign 2025-09-02T17:09:10,158 ERROR: Failed to build one or more wheels 2025-09-02T17:09:10,159 Exception information: 2025-09-02T17:09:10,159 Traceback (most recent call last): 2025-09-02T17:09:10,159 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 107, in _run_wrapper 2025-09-02T17:09:10,159 status = _inner_run() 2025-09-02T17:09:10,159 ^^^^^^^^^^^^ 2025-09-02T17:09:10,159 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 98, in _inner_run 2025-09-02T17:09:10,159 return self.run(options, args) 2025-09-02T17:09:10,159 ^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-02T17:09:10,159 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 71, in wrapper 2025-09-02T17:09:10,159 return func(self, options, args) 2025-09-02T17:09:10,159 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-02T17:09:10,159 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 179, in run 2025-09-02T17:09:10,159 raise CommandError("Failed to build one or more wheels") 2025-09-02T17:09:10,159 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-02T17:09:10,162 Removed build tracker: '/tmp/pip-build-tracker-wz2dxgyg'