2025-09-04T18:26:22,413 Created temporary directory: /tmp/pip-build-tracker-c8qtkv82 2025-09-04T18:26:22,414 Initialized build tracking at /tmp/pip-build-tracker-c8qtkv82 2025-09-04T18:26:22,414 Created build tracker: /tmp/pip-build-tracker-c8qtkv82 2025-09-04T18:26:22,414 Entered build tracker: /tmp/pip-build-tracker-c8qtkv82 2025-09-04T18:26:22,415 Created temporary directory: /tmp/pip-wheel-ct7704t7 2025-09-04T18:26:22,418 Created temporary directory: /tmp/pip-ephem-wheel-cache-eysft5_4 2025-09-04T18:26:22,478 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-04T18:26:22,480 2 location(s) to search for versions of anndata: 2025-09-04T18:26:22,480 * https://pypi.org/simple/anndata/ 2025-09-04T18:26:22,480 * https://www.piwheels.org/simple/anndata/ 2025-09-04T18:26:22,481 Fetching project page and analyzing links: https://pypi.org/simple/anndata/ 2025-09-04T18:26:22,481 Getting page https://pypi.org/simple/anndata/ 2025-09-04T18:26:22,482 Found index url https://pypi.org/simple/ 2025-09-04T18:26:22,634 Fetched page https://pypi.org/simple/anndata/ as application/vnd.pypi.simple.v1+json 2025-09-04T18:26:22,662 Found link https://files.pythonhosted.org/packages/1c/b3/35a88e2effa195d38970037e2b35baa231abde75a1024f48dde686a61fc3/anndata-0.1.tar.gz (from https://pypi.org/simple/anndata/), version: 0.1 2025-09-04T18:26:22,663 Found link https://files.pythonhosted.org/packages/37/24/331f925a0ad8d30f86ad0e728f3626ac9e2747f70eee53cf1cd59885232e/anndata-0.2.tar.gz (from https://pypi.org/simple/anndata/), version: 0.2 2025-09-04T18:26:22,663 Found link https://files.pythonhosted.org/packages/34/14/b966e2960fd1ebb91ef3ae8e6a78f14547b6a69835e37e221f9a48b30d7a/anndata-0.2.1.tar.gz (from https://pypi.org/simple/anndata/), version: 0.2.1 2025-09-04T18:26:22,663 Found link https://files.pythonhosted.org/packages/2c/bc/a030c6c263548baa0233af4db8766881664ad15ac5728c289a541ca9d2a2/anndata-0.3.tar.gz (from https://pypi.org/simple/anndata/), version: 0.3 2025-09-04T18:26:22,663 Found link https://files.pythonhosted.org/packages/1a/37/4759352c111f834cefb18e7423663f43ffe4f3bce67128af5ac265cd5fac/anndata-0.3.0.1.tar.gz (from https://pypi.org/simple/anndata/), version: 0.3.0.1 2025-09-04T18:26:22,664 Found link https://files.pythonhosted.org/packages/b4/d3/a5ab139c8349b3386ae017347db0387e46de1d3c7a2f6551fab854c3990a/anndata-0.3.0.2.tar.gz (from https://pypi.org/simple/anndata/), version: 0.3.0.2 2025-09-04T18:26:22,664 Found link https://files.pythonhosted.org/packages/d2/bf/74257d9179f12a6959b59a29d76aa2bed67e54b3bbe7c44e74966723600f/anndata-0.3.0.3.tar.gz (from https://pypi.org/simple/anndata/), version: 0.3.0.3 2025-09-04T18:26:22,664 Found link https://files.pythonhosted.org/packages/e9/2a/47d30d2ac877e6f94ec7ba22dba8d652d76373da53c6227d45ae60e4c65a/anndata-0.3.1.tar.gz (from https://pypi.org/simple/anndata/), version: 0.3.1 2025-09-04T18:26:22,664 Found link 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Found link https://files.pythonhosted.org/packages/df/a8/d383b7a1835d1c03228b796f3168c4994612cd80d68cddbdd086bcc36262/anndata-0.5.10.tar.gz (from https://pypi.org/simple/anndata/), version: 0.5.10 2025-09-04T18:26:22,669 Found link https://files.pythonhosted.org/packages/63/fc/66af54be32426d0a5fcebd07eb86972c8c1bfa870354170d520600fc82db/anndata-0.5.10.post1.tar.gz (from https://pypi.org/simple/anndata/), version: 0.5.10.post1 2025-09-04T18:26:22,670 Found link https://files.pythonhosted.org/packages/37/27/0de4e3c341cedb7323fae0a8bb3048e4dbd97917ea42b9eb446545347957/anndata-0.5.10.post2.tar.gz (from https://pypi.org/simple/anndata/), version: 0.5.10.post2 2025-09-04T18:26:22,670 Found link https://files.pythonhosted.org/packages/de/26/c20b83514c242a20896cec8d1079c86040af7fcf1bb4d1507b5b6d835231/anndata-0.6.tar.gz (from https://pypi.org/simple/anndata/), version: 0.6 2025-09-04T18:26:22,670 Skipping link: No binaries permitted for anndata: 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https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,824 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.5.7-py3-none-any.whl#sha256=889bb10a65e1dc855f1212055fdb021907ad763f7d311a2015627f5730f7010c (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,824 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.5.6-py3-none-any.whl#sha256=2ffee4ec9365149911fa6085fa108917abdc3409a4d9a4397e9dc69509e88e2d (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,825 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.5.5-py3-none-any.whl#sha256=c6869d239db9cdbbd4c85e009f1242c497bbdfa39b322b2b31b53e1b7a5ce5d9 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,825 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.5.4-py3-none-any.whl#sha256=dbe99058a335f5a5e0bb68ab66602b8fc4f283ca13f90a1607156aa0efe8f70a (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,825 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.5.3-py3-none-any.whl#sha256=2c9c113243c0a9c8b1af08ea9a9c62d0ff65f50ed723a949abf465b865a6086b (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,825 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.5.2-py3-none-any.whl#sha256=3c8a2dbc07f7ce844d39fb03906ac47d42cb856962208988b6ad77a9f6e51ace (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,825 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.5.1-py3-none-any.whl#sha256=cf6af5252207c8c0081a588264d8e2e205859b682e153bb6ea6244b6525b3adc (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,825 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.5-py3-none-any.whl#sha256=30e3a32eabe0ab36db4ce0d9088b11a8ef0cbc6b2c9cbdbd33feccf9074e0850 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,825 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.4.4-py3-none-any.whl#sha256=22dcfafb1a1b6b1d58de83f5e0f3a400078ff67cb2966babdae8f5584da5b53f (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,826 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.4.3-py3-none-any.whl#sha256=666b61fea65d8f4b75b78d444746a7b5f6c3a78346bd39f37b0d95e476e081b4 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,826 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.4.2-py3-none-any.whl#sha256=9f9b391f6858f0e20eed45bb9479491329f6145555a8c29b685a80d31b002417 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,826 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.4.1-py3-none-any.whl#sha256=361373b8560f738306659cf897cfb73a3909a7ffdb7f7fbe98ea027ef31bb3ca (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,826 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.4-py3-none-any.whl#sha256=ed2c978d00066a2b821a092c9480d0ca2247a975cc88f9a0480a5ee4c6c957b1 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,826 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.3.4-py3-none-any.whl#sha256=3cc12fe688e8ee0f570b8b6cb3cec97b137a6339cfece77941cbec09f666fdbb (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,826 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.3.3-py3-none-any.whl#sha256=1047f09cd6f0323c835f245d9c278a1eb6acd367ebe7ae9daf7d0b0c45180424 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,826 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.3.2-py3-none-any.whl#sha256=dff91458e8094797b25429aad4262c24e02d35a4db268a4988aff3ea5f200d74 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,827 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.3.1-py3-none-any.whl#sha256=7cf8704cd12889bdbc2f0a137aa0b317132be48cc2f8416a55203b48459edeb5 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,827 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.3.0.3-py3-none-any.whl#sha256=af62f0ff23466bdf97763450a306b6dc95f9e2650837515e9a1f860610670be2 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,827 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.3.0.2-py3-none-any.whl#sha256=7f819eeb350455220590773253b8d1b9f74212f4d8ac14872a439a105943013a (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,827 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.3.0.1-py3-none-any.whl#sha256=a90a482652e605b9119f670b4772e8c4dc7e97150a3df9a41f43cf61cbbcadea (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,827 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.3-py3-none-any.whl#sha256=59d5ebe7fb675b0955df6b2078ad70d7630531e60ae78162f95353ffd53cf384 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,827 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.2.1-py3-none-any.whl#sha256=97ddca802815955b9760aecc00269bd2212dd55b2f7da0eb60ad16126124f866 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,827 Skipping link: No binaries permitted for anndata: https://archive1.piwheels.org/simple/anndata/anndata-0.1-py3-none-any.whl#sha256=27ea20a0626da7e26a4a2d30c3245c6b0bfe6c9831f40457fc0b963839d03969 (from https://www.piwheels.org/simple/anndata/) 2025-09-04T18:26:22,828 Skipping link: not a file: https://www.piwheels.org/simple/anndata/ 2025-09-04T18:26:22,828 Skipping link: not a file: https://pypi.org/simple/anndata/ 2025-09-04T18:26:22,861 Given no hashes to check 1 links for project 'anndata': discarding no candidates 2025-09-04T18:26:22,862 Collecting anndata==0.2 2025-09-04T18:26:22,864 Created temporary directory: /tmp/pip-unpack-396ynqa7 2025-09-04T18:26:23,000 Downloading anndata-0.2.tar.gz (23 kB) 2025-09-04T18:26:23,029 Added anndata==0.2 from https://files.pythonhosted.org/packages/37/24/331f925a0ad8d30f86ad0e728f3626ac9e2747f70eee53cf1cd59885232e/anndata-0.2.tar.gz to build tracker '/tmp/pip-build-tracker-c8qtkv82' 2025-09-04T18:26:23,030 Running setup.py (path:/tmp/pip-wheel-ct7704t7/anndata_da68b6b2208e4b84840bb5371b66c031/setup.py) egg_info for package anndata 2025-09-04T18:26:23,030 Created temporary directory: /tmp/pip-pip-egg-info-5hp1l6zn 2025-09-04T18:26:23,030 Preparing metadata (setup.py): started 2025-09-04T18:26:23,031 Running command python setup.py egg_info 2025-09-04T18:26:23,558 /tmp/pip-wheel-ct7704t7/anndata_da68b6b2208e4b84840bb5371b66c031/versioneer.py:566: SyntaxWarning: invalid escape sequence '\s' 2025-09-04T18:26:23,558 mo = re.search(r'=\s*"(.*)"', line) 2025-09-04T18:26:23,582 Traceback (most recent call last): 2025-09-04T18:26:23,584 File "", line 2, in 2025-09-04T18:26:23,584 exec(compile(''' 2025-09-04T18:26:23,584 ~~~~^^^^^^^^^^^^ 2025-09-04T18:26:23,585 # This is -- a caller that pip uses to run setup.py 2025-09-04T18:26:23,585 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,585 ...<32 lines>... 2025-09-04T18:26:23,585 exec(compile(setup_py_code, filename, "exec")) 2025-09-04T18:26:23,585 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,585 ''' % ('/tmp/pip-wheel-ct7704t7/anndata_da68b6b2208e4b84840bb5371b66c031/setup.py',), "", "exec")) 2025-09-04T18:26:23,585 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,585 File "", line 35, in 2025-09-04T18:26:23,586 File "/tmp/pip-wheel-ct7704t7/anndata_da68b6b2208e4b84840bb5371b66c031/setup.py", line 8, in 2025-09-04T18:26:23,586 with req_path.open() as requirements: 2025-09-04T18:26:23,586 ~~~~~~~~~~~~~^^ 2025-09-04T18:26:23,586 File "/usr/lib/python3.13/pathlib/_local.py", line 539, in open 2025-09-04T18:26:23,586 return io.open(self, mode, buffering, encoding, errors, newline) 2025-09-04T18:26:23,586 ~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,586 FileNotFoundError: [Errno 2] No such file or directory: 'scanpy.egg-info/requires.txt' 2025-09-04T18:26:23,676 ERROR: python setup.py egg_info exited with 1 2025-09-04T18:26:23,688 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-04T18:26:23,688 exec(compile('"'"''"'"''"'"' 2025-09-04T18:26:23,688 # This is -- a caller that pip uses to run setup.py 2025-09-04T18:26:23,688 # 2025-09-04T18:26:23,688 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-04T18:26:23,688 # import from `distutils.core` to work with newer packaging standards. 2025-09-04T18:26:23,688 # - It provides a clear error message when setuptools is not installed. 2025-09-04T18:26:23,688 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-04T18:26:23,688 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-04T18:26:23,688 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-04T18:26:23,688 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-04T18:26:23,688 import os, sys, tokenize, traceback 2025-09-04T18:26:23,688 2025-09-04T18:26:23,688 try: 2025-09-04T18:26:23,688 import setuptools 2025-09-04T18:26:23,688 except ImportError: 2025-09-04T18:26:23,688 print( 2025-09-04T18:26:23,688 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-04T18:26:23,688 "the build environment with exception:", 2025-09-04T18:26:23,688 file=sys.stderr, 2025-09-04T18:26:23,688 ) 2025-09-04T18:26:23,688 traceback.print_exc() 2025-09-04T18:26:23,688 sys.exit(1) 2025-09-04T18:26:23,688 2025-09-04T18:26:23,688 __file__ = %r 2025-09-04T18:26:23,688 sys.argv[0] = __file__ 2025-09-04T18:26:23,688 2025-09-04T18:26:23,688 if os.path.exists(__file__): 2025-09-04T18:26:23,688 filename = __file__ 2025-09-04T18:26:23,688 with tokenize.open(__file__) as f: 2025-09-04T18:26:23,688 setup_py_code = f.read() 2025-09-04T18:26:23,688 else: 2025-09-04T18:26:23,688 filename = "" 2025-09-04T18:26:23,688 setup_py_code = "from setuptools import setup; setup()" 2025-09-04T18:26:23,688 2025-09-04T18:26:23,688 exec(compile(setup_py_code, filename, "exec")) 2025-09-04T18:26:23,688 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-ct7704t7/anndata_da68b6b2208e4b84840bb5371b66c031/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-5hp1l6zn[/] 2025-09-04T18:26:23,688 [bold magenta]cwd[/]: /tmp/pip-wheel-ct7704t7/anndata_da68b6b2208e4b84840bb5371b66c031/ 2025-09-04T18:26:23,688 Preparing metadata (setup.py): finished with status 'error' 2025-09-04T18:26:23,689 ERROR: metadata generation failed 2025-09-04T18:26:23,694 Exception information: 2025-09-04T18:26:23,694 Traceback (most recent call last): 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-04T18:26:23,694 call_subprocess( 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~~~^ 2025-09-04T18:26:23,694 args, 2025-09-04T18:26:23,694 ^^^^^ 2025-09-04T18:26:23,694 ...<2 lines>... 2025-09-04T18:26:23,694 spinner=spinner, 2025-09-04T18:26:23,694 ^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 ) 2025-09-04T18:26:23,694 ^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-04T18:26:23,694 raise error 2025-09-04T18:26:23,694 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-04T18:26:23,694 2025-09-04T18:26:23,694 The above exception was the direct cause of the following exception: 2025-09-04T18:26:23,694 2025-09-04T18:26:23,694 Traceback (most recent call last): 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-04T18:26:23,694 status = _inner_run() 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-04T18:26:23,694 return self.run(options, args) 2025-09-04T18:26:23,694 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-04T18:26:23,694 return func(self, options, args) 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-04T18:26:23,694 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-04T18:26:23,694 result = self._result = resolver.resolve( 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~~~~^ 2025-09-04T18:26:23,694 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-04T18:26:23,694 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 ) 2025-09-04T18:26:23,694 ^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-04T18:26:23,694 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-04T18:26:23,694 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-04T18:26:23,694 if not criterion.candidates: 2025-09-04T18:26:23,694 ^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-04T18:26:23,694 return bool(self._sequence) 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-04T18:26:23,694 self._bool = any(self) 2025-09-04T18:26:23,694 ~~~^^^^^^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-04T18:26:23,694 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-04T18:26:23,694 ^^^^^^^^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-04T18:26:23,694 candidate = func() 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-04T18:26:23,694 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-04T18:26:23,694 link, template, name, version 2025-09-04T18:26:23,694 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 ) 2025-09-04T18:26:23,694 ^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-04T18:26:23,694 self._link_candidate_cache[link] = LinkCandidate( 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~^ 2025-09-04T18:26:23,694 link, 2025-09-04T18:26:23,694 ^^^^^ 2025-09-04T18:26:23,694 ...<3 lines>... 2025-09-04T18:26:23,694 version=version, 2025-09-04T18:26:23,694 ^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 ) 2025-09-04T18:26:23,694 ^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-04T18:26:23,694 super().__init__( 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~~~~^ 2025-09-04T18:26:23,694 link=link, 2025-09-04T18:26:23,694 ^^^^^^^^^^ 2025-09-04T18:26:23,694 ...<4 lines>... 2025-09-04T18:26:23,694 version=version, 2025-09-04T18:26:23,694 ^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 ) 2025-09-04T18:26:23,694 ^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-04T18:26:23,694 self.dist = self._prepare() 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~^^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-04T18:26:23,694 dist = self._prepare_distribution() 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-04T18:26:23,694 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-04T18:26:23,694 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-04T18:26:23,694 dist = _get_prepared_distribution( 2025-09-04T18:26:23,694 req, 2025-09-04T18:26:23,694 ...<3 lines>... 2025-09-04T18:26:23,694 self.check_build_deps, 2025-09-04T18:26:23,694 ) 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-04T18:26:23,694 abstract_dist.prepare_distribution_metadata( 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-04T18:26:23,694 finder, build_isolation, check_build_deps 2025-09-04T18:26:23,694 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 ) 2025-09-04T18:26:23,694 ^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-04T18:26:23,694 self.req.prepare_metadata() 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-04T18:26:23,694 self.metadata_directory = generate_metadata_legacy( 2025-09-04T18:26:23,694 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-04T18:26:23,694 build_env=self.build_env, 2025-09-04T18:26:23,694 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 ...<3 lines>... 2025-09-04T18:26:23,694 details=details, 2025-09-04T18:26:23,694 ^^^^^^^^^^^^^^^^ 2025-09-04T18:26:23,694 ) 2025-09-04T18:26:23,694 ^ 2025-09-04T18:26:23,694 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-04T18:26:23,694 raise MetadataGenerationFailed(package_details=details) from error 2025-09-04T18:26:23,694 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-04T18:26:23,718 Removed anndata==0.2 from https://files.pythonhosted.org/packages/37/24/331f925a0ad8d30f86ad0e728f3626ac9e2747f70eee53cf1cd59885232e/anndata-0.2.tar.gz from build tracker '/tmp/pip-build-tracker-c8qtkv82' 2025-09-04T18:26:23,718 Removed build tracker: '/tmp/pip-build-tracker-c8qtkv82'